Carg17996 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGACTCATGGAATCGGATGCTGCAATGACAGAAGACTTAATTGCTTATAATATTATTCCATTAGATGCTCCTTCTACGACAAATGCTATTGGGTCCATGGCTGAGGTCTTTTAGATTACAATTTTCTTGTTTAGAGATGTGAAAGTTTATCCATTTCTTCAGTTATTTACCTTGAAACTGAACTTTATGTTTAGGTGCAAGCAGCAGTGTCAGCTTTAAAATATTTCAGTGGCCTTCCAAAGTTGCCTTCAGAATTTTGTTTTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCATTTTTGGATTTCAGGTTTGGACTTCTATGTTGGTGGTTGTATACAACTCAATCCCGTCCCCTGTTTGTATAGTTTGTTACTGGGTTTCTATGTTTTAATACTTGTAACATATGTATTTCCGATTATTTAGGAGTTATATTAATGGATTTGACTATCAACATGTGATTCTAGTTTTCATTCCTCACCTTATGTGTTGATCAGGGTTTTAAAATAAGGTTGAGTGTTCTCCTAAGGGTTTTTGTTTTGTTTTGTTTTGTAAGGTTCTAATTGGGAATCGGGTTTAAAAGTTTCTCTTTCTTTGTCTCGTAAGAAACTCATTTACTTTTGTCACGTTGAATTTTAATTCCATGGTTCTGAGTCTAGTTGCCTTTTCATTTTTGTATTGGGGTGGATTTATGATTATTTACCTTGTTTTAGTCTATTGGTTATCATAGTTTTTTTTTTTTAGATTTTTAATTTGATGTGTCCAACATTGAAATTGGATGGCTTGGTTATTTCTTTAAGAATTTCAATTTATATTGTCTAATGTTGAATTTTGTGGTCTTCAGAAAGACAATGTGTCCAATCAGCGTGAACATGTAGTGCACCTACTTGCCAACGAACAGTCTCGCCTTTGTATTCCTGAAGAAAATGAACCAGTATGTCCTTTATTCTCATCATTGAACATTGATGGACAGTTTTGTTTACTTTCAATCATTAACAATTGGAGCTGTTTGCGTTTGCTTTGGTTGGTGATTTGAGCCATTACCTTTCAATGAGATCATTTTATGTGAGATTATTTCTATCCTAAAATAATTGTTGTTGTAGTTGACTAATTATATATTATGTTGATTGGGTACTTGATATCTAATTTGTGGTTTGTTTTTGCTTTGTCAATGCGAAAGCTTGATGAATGAGGTTTTCGATGAAATAAGAACTTCACATTCCTTTCGTATGAGCTCGAATTTTAAGCAACATGAGGAAATGACATACATACAATGGGTATGCGCTTATGTTTGAATCTGGGAGCTTATAGGCTTACTATTGTGATTTAAAAGTTCCTTTCCAAGGGGATGTATTAAGGTTTGTAACTTACGAATGAGTATAGGGACTTTTCAAAGGATTGACAACCATTTGGAGGGTATTTAGAGATTGCCAAGAAAATCCTCTCAAGGATTTATTTGATGGAGGTATGCATCAAGATCAAAAAGTGATATTGGGTTCATCTCACAAATATTCAACAAACAGTCAACTCTTGTTGCTGTTAGCTTCGCCAATAATGTGTATTTTAATTTCTGTGGAGGATTTTATTTATTTGATATTTGGTTGGAATCCATGCCCCCATTCTAGACAATCTATCAGCTTGGATCATGACTTTTCTCCTCCGTCACCCTAAAACCCCAACCCTTCCTACCAGCTGCAGTTGTTTGTTGTCGTTGCCGGTTGGTTTTTCAACTGTTTTGATTGCTATTTGCTGATTTTTTTTCCTTTCCCCTTTTCTTCTCTCTCGCATCGTTCAACAACTCTTGGGCCTGAAACCCTTCCCCTCCCTCATCCTAAAGCCAGAACCCTCCTCGTCAGCCGTTGTCCCTTGCCAAGCTAACCAGTGAATGGCGACAAGGAGGAGAAGTATTGTTATATTGTAGCTTATCCCTAGTACTACATTAGAAGAAAGGTGCATCACTCTTCAATTCATTCAACCCTCAAGGATTATGTATTGAATAAAATGTTTCTAGTATTTTTGCTCAATCTATCAAGAAAGCTATTTCTCAGAATTGTAGTCAACAAAAATTTGCTGTATTAGATTATGATGGTGTTTAACTGTGAGAGTATTTCATTCAATCCATAAGCTAAGAATGGTCAATCCAGGCCTGGAGGTTTTGTGGCTAAGTTCTTCCAAAAAAATCATGGAATATCCTTATGGAAGACATCATCAAGAGGGTATTCAATGATTTTTCTTTGTTTCTTTGTTTATTTATCTACTTTATAGAAATCCATCATAAATGCTAGCTTGAGGAAAGTTGATGCAAAGACATTAGGGTACAGGGACTGTAGACCTGTTAGTATTAACTCTTCATATGTATAAGTTCATAGCTAGAGAGTTAGAGCATTTGTAGAAGTTCTTTGTCTACTATCAGAGAATTCCAATCAACTTTTGTGGCTGATCGCCTAATGCTTGATGTTTTTTCTCATTGCTAATGAACTTATGGATGAAGATATATCCTAGTAGGCTCGAATGGAAAAGTTGGATCTCAGGTTGTTTATCATCCACATCATTACTAATGAAAAGGATAGGGAAAAAACCTTGGCATCTGAGTAGCCTTCAACAAGGTGACTCATTGTCTGCCTTTGTTTTCATCCTAGTGGTGGATTGTCTTAAGAGAAATGTTGACTATTGGCATCAAGGGACACTGATCGATGACTTTGAAGTTGGTGAAGGCCCAAATTCTCTGTCCATGAACTTCCTTCATCAAGGTGACACTTTGTCTCCCTTTATTTTCATTCTGTTGGTTTATTGTCCAAGTAGAATGCTCGCTCTCTTGGCATCAAGTTTTTTAAGAGTAGGAATATTTTACATTTTAACTCAATGAAACATTTCTTGGGGGAAAATGGATATCAGTTGATGCCATTTTGAGGAGTTGAGAAGATTCTGACGCAAATTGGTGACCAGTTGTTTGATTTTCAAGTTGTATCCAGAGAACGTTGGAGTTCATCACCCAAAAAAGGGTGGAAGAAGAAATATCACGACCAAAGAGGCAAACATTAGATGAAGAGATGGTGATGCAAGTACGATAATGGATTAGATAGAAATAAGGGAATGGGGCAAGTGATCGACGTAGATTGACTCACCACACCTCTCTATGAGTCTTTGACGATTGATGTGTTCCATCCACACTGGCTGTCACCTGTGTGCTTGCCATGCTGTTGCTATCCTTCAAAATAAAAGGCTCCTTAGCTCATTTTTAAAGTACTGGCATGATGTGCAAATGCGACCAAGAGGATGGAATGTGGCCGCACTTGCACATGAGTTGGTGGCACGTTGTACCACCTTGTGGTCGGGAATGACCAAGTTTGACCATTGATTTACCACATTATAGTACAAGCTCGGTAGATCGTTACTGTTAAATGACAATAGTTTATCAAGCCCAGTCAATATTAGACAAACAACCTTCACCTCCCTACATGTTTATCATCTTAAGCACTTTGAGTTTTATTCCAAACACTCAAAATCACTCAAAACATGATTTTAGTTGAGCGTTAAAACATTCTCATCAACCATATATTAAGGAAAGATCTTAACTCATTAGTTACAATAATGGGTGCTTGATTCACTAGATTGAATCCCATTGGATGTTCATCAAAATCATGTTGGATGTCAATGTTAGAGGTTTGAGCAAGGAACATAAAAGATCTTTGCTACAAAAAGTTCTTCCATTTGGCATTGATAAGAAAAGAATTATAGCAATCAAAGATTTTATCAAAGATGCAGGCTTTACGCCAAGCAATCTTTCAAATCTTTCCCTTCTTTCCAACCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAGTCTTTTCACTGCACAAATCAATAAGCACCCCAAGCTTTGTGCTCGAAGCCTTGGAGCTTGAACTATTATCCTCGACATTTAATGTACTGTTGCATAAATATGAAATGTACTTGTATATGCTAGAGCTCTCATTTGAGGATATTTTTCTGTGTTGCTATAGAAATTGGATGAAGCTGCTGTGGAGGGTGTATTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGGTTTGGTTTTTCCAACTTATTCTTTTTATTTTCTGTATGGAGTTTAGTTTCATCTTATATTTTCATTTTTCAACATGGACTTATGAATTTGATATCTCCTAGAAGAAAATTTTATTTGGAGGACTACAATTATTGAAAGTGTTCTATTGTTTTACAGCTTGTCTGATGTTAGCAAGGAAAAGAAGCTATTGTTTATTTCCTTATACTTTCTTATATGGGGCGAAGCAGCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATGTACGTAACTCTGGACTTCATTTGTAATTATATTCGACTATGTAAACCTTTATTTTTCATTTTTTTCATTTTTTTTTCATTTTTTTGGGATCTTTAAGTTGATCCAACATAAGGCTTGAAAGAAAATTATGTTCAGCATTTATTTTCTTGCAAAGGCTTCAATTACTAATTATTTCATGGGTTTGATTTGGATGTGATACTTTTTGAATCTAATCTAATTTTTTGGGATAAAAAATTGTCTTACCCAAACAACCTTGTCCAAAGCCAATCTAACTGTGAAATATTTGGTTGGGTTGGTTTCGCTTATAGGGTTACTCATCCAAAATGTTATGGAAAACATAGTGAAAATATTAGTCCTTTGACATTCATTACTTATTTTTGTACATTAATTAAGAACAATAACTCCCTCGTAGAGGTTTGTCTTTTAAGCATTAGTCTCTTTTCATTTTCTTAATTAGTTTCATCTATTGTAAAAAAAGGTAACCAATTATTATATATATTCCCAGCTTAAAAGTAATTAATATTGAAGAAATTATTGAATGAATTATGATATATTCATAGTAGTTCAATACCATCCAAACCTGTTTTTAGTCCATTCGTGAAACCAACTTGACCCATAAATTTAATTTTGAACAAGAGATAACTTTTTATTGATGCAATGAAAATAGACTATTGCTTATAAGGTACAAACTTCACAAGGATGTGAAAGGAGAGAAAAAAAAAAAAAAAAAACAAAAAAAGGAAATATGAAATCATAAAAATTGATTTGGAAGAGAACGTCACATATAAGCTTTTAAACTTGCTGCCAATTTTCTATTTAGAAGTTTAAGTAAAGATCCAGTGATGGAAAAAGTATGCACTCTCCACTTTCTTCCTAATCGTACTTTTGTAATTTATTTTTCTGTATTTTCCCATGAGCTTCATAATCTTACTCTTAGACCTTTAATTTCTATGCAGATGGTCCGGGAAATGGATGTGATATTGAGGCATGAGATTGCGCAGCCAGCCAAGAGTTGCGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTTTCCTCTTTATGAGGTCATGGCCGCGGTATGTTTCTTGTCTCACCTAAAGCTTTTAAAGAAAGAGTAG ATGAAAGGACTCATGGAATCGGATGCTGCAATGACAGAAGACTTAATTGCTTATAATATTATTCCATTAGATGCTCCTTCTACGACAAATGCTATTGGGTCCATGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAATATTTCAGTGGCCTTCCAAAGTTGCCTTCAGAATTTTGTTTTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCATTTTTGGATTTCAGAAAGACAATGTGTCCAATCAGCGTGAACATGTAGTGCACCTACTTGCCAACGAACAGTCTCGCCTTTGTATTCCTGAAGAAAATGAACCAAAATTGGATGAAGCTGCTGTGGAGGGTGTATTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGCTTGTCTGATGTTAGCAAGGAAAAGAAGCTATTGTTTATTTCCTTATACTTTCTTATATGGGGCGAAGCAGCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTCCGGGAAATGGATGTGATATTGAGGCATGAGATTGCGCAGCCAGCCAAGAGTTGCGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTTTCCTCTTTATGAGGTCATGGCCGCGGTATGTTTCTTGTCTCACCTAAAGCTTTTAAAGAAAGAGTAG ATGAAAGGACTCATGGAATCGGATGCTGCAATGACAGAAGACTTAATTGCTTATAATATTATTCCATTAGATGCTCCTTCTACGACAAATGCTATTGGGTCCATGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAATATTTCAGTGGCCTTCCAAAGTTGCCTTCAGAATTTTGTTTTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCATTTTTGGATTTCAGAAAGACAATGTGTCCAATCAGCGTGAACATGTAGTGCACCTACTTGCCAACGAACAGTCTCGCCTTTGTATTCCTGAAGAAAATGAACCAAAATTGGATGAAGCTGCTGTGGAGGGTGTATTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGCTTGTCTGATGTTAGCAAGGAAAAGAAGCTATTGTTTATTTCCTTATACTTTCTTATATGGGGCGAAGCAGCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTCCGGGAAATGGATGTGATATTGAGGCATGAGATTGCGCAGCCAGCCAAGAGTTGCGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTTTCCTCTTTATGAGGTCATGGCCGCGGTATGTTTCTTGTCTCACCTAAAGCTTTTAAAGAAAGAGTAG MKGLMESDAAMTEDLIAYNIIPLDAPSTTNAIGSMAEVQAAVSALKYFSGLPKLPSEFCFPETRSPDILDFLHFIFGFQKDNVSNQREHVVHLLANEQSRLCIPEENEPKLDEAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSDVSKEKKLLFISLYFLIWGEAANVRFLPECLCYIFHHMVREMDVILRHEIAQPAKSCESKDGVSFLDQVIFPLYEVMAAVCFLSHLKLLKKE Homology
BLAST of Carg17996 vs. NCBI nr
Match: KAG7022061.1 (Callose synthase 9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 479.6 bits (1233), Expect = 1.6e-131 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of Carg17996 vs. NCBI nr
Match: KAG6588163.1 (Callose synthase 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Carg17996 vs. NCBI nr
Match: XP_022929596.1 (callose synthase 9-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Carg17996 vs. NCBI nr
Match: XP_022929588.1 (callose synthase 9-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Carg17996 vs. NCBI nr
Match: XP_022966560.1 (callose synthase 9-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 441.0 bits (1133), Expect = 6.3e-120 Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy Swiss-Prot
Match: Q9SFU6 (Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2) HSP 1 Score: 340.1 bits (871), Expect = 2.0e-92 Identity = 166/232 (71.55%), Postives = 194/232 (83.62%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy Swiss-Prot
Match: Q9SJM0 (Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5) HSP 1 Score: 240.4 bits (612), Expect = 2.1e-62 Identity = 115/223 (51.57%), Postives = 158/223 (70.85%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy Swiss-Prot
Match: Q9LXT9 (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3) HSP 1 Score: 172.2 bits (435), Expect = 7.1e-42 Identity = 96/223 (43.05%), Postives = 139/223 (62.33%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy Swiss-Prot
Match: Q9AUE0 (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 2.1e-41 Identity = 92/217 (42.40%), Postives = 134/217 (61.75%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy Swiss-Prot
Match: Q9SL03 (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3) HSP 1 Score: 170.2 bits (430), Expect = 2.7e-41 Identity = 93/213 (43.66%), Postives = 132/213 (61.97%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy TrEMBL
Match: A0A6J1ESK3 (1,3-beta-glucan synthase OS=Cucurbita moschata OX=3662 GN=LOC111436127 PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy TrEMBL
Match: A0A6J1ENK3 (1,3-beta-glucan synthase OS=Cucurbita moschata OX=3662 GN=LOC111436127 PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy TrEMBL
Match: A0A6J1HNC0 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111466202 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120 Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy TrEMBL
Match: A0A6J1HS07 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111466202 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120 Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of Carg17996 vs. ExPASy TrEMBL
Match: A0A6J1HRZ2 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111466202 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120 Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of Carg17996 vs. TAIR 10
Match: AT3G07160.1 (glucan synthase-like 10 ) HSP 1 Score: 340.1 bits (871), Expect = 1.4e-93 Identity = 166/232 (71.55%), Postives = 194/232 (83.62%), Query Frame = 0
BLAST of Carg17996 vs. TAIR 10
Match: AT2G36850.1 (glucan synthase-like 8 ) HSP 1 Score: 240.4 bits (612), Expect = 1.5e-63 Identity = 115/223 (51.57%), Postives = 158/223 (70.85%), Query Frame = 0
BLAST of Carg17996 vs. TAIR 10
Match: AT5G13000.1 (glucan synthase-like 12 ) HSP 1 Score: 172.2 bits (435), Expect = 5.1e-43 Identity = 96/223 (43.05%), Postives = 139/223 (62.33%), Query Frame = 0
BLAST of Carg17996 vs. TAIR 10
Match: AT5G13000.2 (glucan synthase-like 12 ) HSP 1 Score: 172.2 bits (435), Expect = 5.1e-43 Identity = 96/223 (43.05%), Postives = 139/223 (62.33%), Query Frame = 0
BLAST of Carg17996 vs. TAIR 10
Match: AT1G05570.1 (callose synthase 1 ) HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42 Identity = 92/217 (42.40%), Postives = 134/217 (61.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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