Carg17970 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17970
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cyclin-dependent protein kinase inhibitor SMR9-like
Location	Carg_Chr11: 4166577 .. 4166972 (+)
RNA-Seq Expression	Carg17970
Synteny	Carg17970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAAGGAGGAAGAACAAGAAGAGGAACAAACCCAACACCTCCATTGAAGAAGACGAAGAAGAAGCTCAAGAACAGCACCAACAATGGCGGAAGAAGAAGAAGAAGAAGAATCATAATGAGTAGTAAAATAAGAGAAGAAATTGAAGAAGCAGCAGCTTCAAGCTCCTCTGCCATGGCTGCCATTGATGAACAAGCTTCAAGCTCTGATTTTGAACACTGTAGCACTCCAAAAGCTGATCGATTTAAGATCCCAGAGATTCAAATTTGCCCACCAGCTCCAAAAAAACAGAGGCCCATTTCAAATTGTTCTTTGCAAAAACATTCTCCAATTGCCTTCTTTGCTTCACCTGATATAGAGCTGTTCTTCTTCTTCTCACAATCAAATTAG

mRNA sequence

ATGGCTTCCAAAGGAGGAAGAACAAGAAGAGGAACAAACCCAACACCTCCATTGAAGAAGACGAAGAAGAAGCTCAAGAACAGCACCAACAATGGCGGAAGAAGAAGAAGAAGAAGAATCATAATGAGTAGTAAAATAAGAGAAGAAATTGAAGAAGCAGCAGCTTCAAGCTCCTCTGCCATGGCTGCCATTGATGAACAAGCTTCAAGCTCTGATTTTGAACACTGTAGCACTCCAAAAGCTGATCGATTTAAGATCCCAGAGATTCAAATTTGCCCACCAGCTCCAAAAAAACAGAGGCCCATTTCAAATTGTTCTTTGCAAAAACATTCTCCAATTGCCTTCTTTGCTTCACCTGATATAGAGCTGTTCTTCTTCTTCTCACAATCAAATTAG

Coding sequence (CDS)

ATGGCTTCCAAAGGAGGAAGAACAAGAAGAGGAACAAACCCAACACCTCCATTGAAGAAGACGAAGAAGAAGCTCAAGAACAGCACCAACAATGGCGGAAGAAGAAGAAGAAGAAGAATCATAATGAGTAGTAAAATAAGAGAAGAAATTGAAGAAGCAGCAGCTTCAAGCTCCTCTGCCATGGCTGCCATTGATGAACAAGCTTCAAGCTCTGATTTTGAACACTGTAGCACTCCAAAAGCTGATCGATTTAAGATCCCAGAGATTCAAATTTGCCCACCAGCTCCAAAAAAACAGAGGCCCATTTCAAATTGTTCTTTGCAAAAACATTCTCCAATTGCCTTCTTTGCTTCACCTGATATAGAGCTGTTCTTCTTCTTCTCACAATCAAATTAG

Protein sequence

MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSAMAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPDIELFFFFSQSN

Homology

[Close]

BLAST of Carg17970 vs. NCBI nr
Match: KAG7022087.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.4 bits (633), Expect = 3.3e-62
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA 60
           MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA 60

Query: 61  MAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPD 120
           MAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPD
Sbjct: 61  MAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPD 120

Query: 121 IELFFFFSQSN 132
           IELFFFFSQSN
Sbjct: 121 IELFFFFSQSN 131

[Close]

BLAST of Carg17970 vs. NCBI nr
Match: XP_023530358.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo] >KAG6588189.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 8.2e-61
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGG-RRRRRRIIMSSKIREEIEEAAASSSS 60
           MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGG RRRRRRIIMSSKIREEIEEAAASSSS
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRRIIMSSKIREEIEEAAASSSS 60

Query: 61  AMAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASP 120
           AMAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASP
Sbjct: 61  AMAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASP 120

Query: 121 DIELFFFFSQSN 132
           DIELFFFFSQSN
Sbjct: 121 DIELFFFFSQSN 132

[Close]

BLAST of Carg17970 vs. NCBI nr
Match: KAG6590203.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023854.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-23
Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 1   MASK-GGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSS 60
           MASK GGR  +G        K  +K+K   +   R      I+S+K  EEIE +++ + +
Sbjct: 1   MASKGGGRRNKGKKTAKTQLKKNQKIKKMKDQSKR------IVSTKRTEEIEVSSSIAMA 60

Query: 61  AMAAIDEQA-SSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFAS 120
           AMAA++E A SSSDFE CSTPKA+RF+IPEI+ICPPAPKKQR  SNCS QK SPI+FFAS
Sbjct: 61  AMAAMEESASSSSDFEECSTPKAERFRIPEIKICPPAPKKQRITSNCSSQKPSPISFFAS 120

Query: 121 PDIELFFFFS 129
           PDIE+FFF S
Sbjct: 121 PDIEMFFFLS 124

[Close]

BLAST of Carg17970 vs. NCBI nr
Match: XP_022154348.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-19
Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIRE-EIEEAAASSSS 60
           MASKGG  R        +K +KK  K S     +R         K +E E E A   +SS
Sbjct: 1   MASKGGIAR------TKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASS 60

Query: 61  AMAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCS-LQKHSPIAFFAS 120
           + A  + ++ SSD E C TPKA+RF+IPEI+ICPPAPKKQR  SNCS LQ+ SPIAFFAS
Sbjct: 61  SAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS 120

Query: 121 PDIELFFFFSQS 131
           PDIELFFFFS S
Sbjct: 121 PDIELFFFFSSS 126

[Close]

BLAST of Carg17970 vs. NCBI nr
Match: KGN66487.1 (hypothetical protein Csa_006949 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-17
Identity = 70/141 (49.65%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA 60
           MASK G  RR    T   +   KK+K +  N           + K+ EE  E   SSS+ 
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNN----------NIKLEEEEIEKGTSSSTT 60

Query: 61  MAAIDEQAS--SSDFEH-------CSTPKADRFKIPEIQICPPAPKKQRPI----SNCSL 120
           +   ++  S  S DFE        CSTPKA+RFKIPEI+ICPPAPKK+R      SNCSL
Sbjct: 61  INFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSL 120

Query: 121 QKHSPIAFFASPDIELFFFFS 129
           Q+ SPIAFFASPDIELFFFFS
Sbjct: 121 QRPSPIAFFASPDIELFFFFS 131

[Close]

BLAST of Carg17970 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 76  CSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPDIELFF 126
           C TPKA + +IPE+  CPPAPKKQR   NC L++   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQ-IVFFAPPEIELFF 102

[Close]

BLAST of Carg17970 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 20  KTKKKLKNSTNNGGRRRRRRIIMS----SKIREEIEEAAASSSSAMAAIDEQASSSDFEH 79
           K KK L+ +T    RRR+R    +      I  ++   +++S+S  +       S++   
Sbjct: 4   KGKKPLRRTTT---RRRKRSHFKNPSPPCSINSDVTSTSSTSTSPTSTATPSPVSAE-SG 63

Query: 80  CSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPDIELFFFFS 129
           C TP+  R  IPE+  CPPAPKKQ+   NC+L++   IAFFA PD+ELFF F+
Sbjct: 64  CCTPEKSR--IPEMLTCPPAPKKQKVAQNCALRRRQ-IAFFAPPDVELFFVFA 109

[Close]

BLAST of Carg17970 vs. ExPASy TrEMBL
Match: A0A6J1DK32 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=3673 GN=LOC111021634 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIRE-EIEEAAASSSS 60
           MASKGG  R        +K +KK  K S     +R         K +E E E A   +SS
Sbjct: 1   MASKGGIAR------TKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASS 60

Query: 61  AMAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCS-LQKHSPIAFFAS 120
           + A  + ++ SSD E C TPKA+RF+IPEI+ICPPAPKKQR  SNCS LQ+ SPIAFFAS
Sbjct: 61  SAAMAENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS 120

Query: 121 PDIELFFFFSQS 131
           PDIELFFFFS S
Sbjct: 121 PDIELFFFFSSS 126

[Close]

BLAST of Carg17970 vs. ExPASy TrEMBL
Match: A0A0A0M041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 9.2e-18
Identity = 70/141 (49.65%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA 60
           MASK G  RR    T   +   KK+K +  N           + K+ EE  E   SSS+ 
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNN----------NIKLEEEEIEKGTSSSTT 60

Query: 61  MAAIDEQAS--SSDFEH-------CSTPKADRFKIPEIQICPPAPKKQRPI----SNCSL 120
           +   ++  S  S DFE        CSTPKA+RFKIPEI+ICPPAPKK+R      SNCSL
Sbjct: 61  INFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSL 120

Query: 121 QKHSPIAFFASPDIELFFFFS 129
           Q+ SPIAFFASPDIELFFFFS
Sbjct: 121 QRPSPIAFFASPDIELFFFFS 131

[Close]

BLAST of Carg17970 vs. ExPASy TrEMBL
Match: A0A4U5P6U3 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000220750 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 53  AAASSSSAMAAIDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSP 112
           A+   SS +A +D +   +    CSTPKA+RF+IPEIQ CPPAP+KQR IS CSLQ+  P
Sbjct: 48  ASCDDSSRIAGLDFEGVDTSTSACSTPKAERFRIPEIQTCPPAPRKQRMISICSLQRR-P 107

Query: 113 IAFFASPDIELFFFFS 129
           IAFFA PD+ELFFF++
Sbjct: 108 IAFFAPPDLELFFFYA 122

[Close]

BLAST of Carg17970 vs. ExPASy TrEMBL
Match: A0A2I4FGU1 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Juglans regia OX=51240 GN=LOC108998689 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 3   SKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSAMA 62
           S  GRTR     T P +KT +K           ++R+++  SKI +E    +  S+S+  
Sbjct: 4   SPTGRTR-----TRPTRKTGRK---------HFKKRQLVQYSKINQEEASTSLPSNSSTP 63

Query: 63  AIDEQASSSDFEH-------------CSTPKADRFKIPEIQICPPAPKKQRPISNCSLQK 122
           + ++ +   D +H             CSTPKA RF+IPE+  CPPAPKKQR +SNCSLQ+
Sbjct: 64  SCNDFSKIGDIDHFDQGVHHEVPSSGCSTPKAQRFRIPEMSTCPPAPKKQRVVSNCSLQR 123

Query: 123 HSPIAFFASPDIELFFFFS 129
            SPI FFA PD+ELFFFF+
Sbjct: 124 -SPIPFFAPPDLELFFFFA 127

[Close]

BLAST of Carg17970 vs. ExPASy TrEMBL
Match: A0A6A1UIU7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007916 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 60/123 (48.78%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 6   GRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSAMAAID 65
           GRTRR      P +   KK   ++ N    R      S+K   E+     S +  +   D
Sbjct: 5   GRTRRRPTCRKPRRNHFKKRLVASKNQETSRSSPSKSSAKSSNEL-----SKNGEIDFED 64

Query: 66  EQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPDIELFF 125
            +A  S    CSTPKA RF+IPEI  CPPAPKKQR ISNCSLQ+ SPIAFFA PD+ELFF
Sbjct: 65  VEAIPSSSSGCSTPKAQRFRIPEISTCPPAPKKQRVISNCSLQR-SPIAFFAPPDLELFF 121

Query: 126 FFS 129
           FF+
Sbjct: 125 FFA 121

[Close]

BLAST of Carg17970 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 76  CSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPDIELFF 126
           C TPKA + +IPE+  CPPAPKKQR   NC L++   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQ-IVFFAPPEIELFF 102

[Close]

BLAST of Carg17970 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 20  KTKKKLKNSTNNGGRRRRRRIIMS----SKIREEIEEAAASSSSAMAAIDEQASSSDFEH 79
           K KK L+ +T    RRR+R    +      I  ++   +++S+S  +       S++   
Sbjct: 4   KGKKPLRRTTT---RRRKRSHFKNPSPPCSINSDVTSTSSTSTSPTSTATPSPVSAE-SG 63

Query: 80  CSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASPDIELFFFFS 129
           C TP+  R  IPE+  CPPAPKKQ+   NC+L++   IAFFA PD+ELFF F+
Sbjct: 64  CCTPEKSR--IPEMLTCPPAPKKQKVAQNCALRRRQ-IAFFAPPDVELFFVFA 109

[Close]

BLAST of Carg17970 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 5.7e-04
Identity = 24/63 (38.10%), Postives = 35/63 (55.56%), Query Frame = 0


Query: 64  IDEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFFASP-DIE 123
           ++E   + + E  +TP A   KIPE+  CPPAP+K+RP   C  + +    FF  P D+E
Sbjct: 48  VEEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKC--RSNVVREFFTPPSDLE 107

Query: 124 LFF 126
             F
Sbjct: 108 TVF 108

The following BLAST results are available for this feature:

BLAST of Carg17970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022087.1	3.3e-62	100.00	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_023530358.1	8.2e-61	99.24	cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]...	[more]
KAG6590203.1	1.4e-23	56.92	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_022154348.1	7.7e-19	53.79	cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]	[more]
KGN66487.1	1.9e-17	49.65	hypothetical protein Csa_006949 [Cucumis sativus]	[more]

BLAST of Carg17970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IWB3	2.6e-09	60.00	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3ECS5	2.4e-07	38.05	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg17970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DK32	3.7e-19	53.79	cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=36...	[more]
A0A0A0M041	9.2e-18	49.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1	[more]
A0A4U5P6U3	2.8e-14	59.21	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000220750 PE=4 SV=1	[more]
A0A2I4FGU1	2.8e-14	42.45	cyclin-dependent protein kinase inhibitor SMR9-like OS=Juglans regia OX=51240 GN...	[more]
A0A6A1UIU7	1.1e-13	48.78	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007916 PE=4 SV=1	[more]

BLAST of Carg17970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20898.1	1.8e-10	60.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51355.1	1.7e-08	38.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G40460.1	5.7e-04	38.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	PANTHER	PTHR33142:SF28	SUBFAMILY NOT NAMED	coord: 23..129
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 23..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17970-RA	Carg17970-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus