Carg17954 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGACTGGTTTGTTTGATCTGGAGAGGCATTTCGCCTTCTATGGCGCTTATCACAGCAACCCAGTCAACATTTTCATTCATGTTCTGTTTGTGTGGCCAATTTTCTTTACCACCCTCGGTATTTGTACTTCACCCCATCTTTCTACACTATTCCCAAATCCCCTTGTGGGTTTGACCACGGCCTGGCCTTCAACTTCGGATTTCTTTTCACCTTAATATATGCTGCATCTTATGTGGTCTTCGATAAGAAAGCGGGGTCCAATGCCGCTTTGCCTTGCTTGATTTGTTGGGTTGGAGAAAGCATACTCGCCTTTAGACTTGGTTATTCTCAGACCTGGAAGGTAATTCCCTGCTTTCTCTCCAATTTAATTTATGGGTCCTTGGTTTTTGCAGTAAATCAATCTGTTTCCTATAGCTTACCCACTTCGATCTCTAATCCTCTTGTTGAGTGAATTGAATGGGATTAGTGGCAAGCGTTGGAAAACAGCTCAATCTGATATAATTTAGTTGGAGTTAGGTAGATGTGTTAAAGTTTGACATCTTGGTGGGAGCAAGTTGGGGCCATCTCAAACGAGAGTTTGTTTGTCTAAAATTTTATTCATTTCTGTTGCCCATCAGATAGTACTGACTGCTCAGTTGTTCTGTTGGACCAATCAGTTAATAGACCATGGAGTATTTGAGGTTAGACAGGTTACTTTCATCTCAGTGAATTGATGAATCTCTTCATGATTCTTAAGCCATTTAATTTCATCTTTTGATAGAAACGAGCACCGGCTTTGTTAGACAATCTTGCTCAACCTTTTCTAATGGCTCCATTCTTTGTATTTTTTGAGGTATTTCTTCTCTGGTTATTCGGAGAGTTACTTGTCGGTGTTGATATTGAAGCAACTTTGTTGTTTCTGATGTTTGGTGTCAGGTTCTTCAAAGTTTGTTCAAATATGAACCATACCCAGGATTTAGTGCGAGTGTGCAAGCGAAGATAAAAGCAGATATCAAAGAGTGGAAAGAACAGAAGGAAAAGCTGACAACCTGCCTAAAGTTCAAGACAACTCTTGCCTAGATCTCCCTTTGTAGTAGTATGAAGAGAAAAACATTTTGAAATCTTTACGTGATATTTGTTAGGAATCACGAACTTTCACAATGATATGATATTGTCTATTTTGAGCATAAACTCTCATGAAGACATGACTCTGATACCATGTTAGAAATCACGAACCTCCACACTAGTATGATATTGTCCACTGCTCTCATGGCATAAGCTCCCTCTCAACAATCCTCGACAATAGACGATGTTTTGCTTTTCAACCTTGATTTGTCATTCTACTATGGTTTGTAATGTAACAGAGTACATAAAATGAATGAAGAAGACACAGGTGCGATGACTTACCTGTTAAATAAGAACTCCAAACGAATGCACA ATGGGGAAGACTGGTTTGTTTGATCTGGAGAGGCATTTCGCCTTCTATGGCGCTTATCACAGCAACCCAGTCAACATTTTCATTCATGTTCTGTTTGTGTGGCCAATTTTCTTTACCACCCTCGCGGGGTCCAATGCCGCTTTGCCTTGCTTGATTTGTTGGGTTGGAGAAAGCATACTCGCCTTTAGACTTGGTTATTCTCAGACCTGGAAGATAGTACTGACTGCTCAGTTGTTCTGTTGGACCAATCAGTTAATAGACCATGGAGTATTTGAGAAACGAGCACCGGCTTTGTTAGACAATCTTGCTCAACCTTTTCTAATGGCTCCATTCTTTGTATTTTTTGAGGTATTTCTTCTCTGGTTATTCGGAGAGTTACTTGTCGGTGTTGATATTGAAGCAACTTTGTTGTTTCTGATGTTTGGTGTCAGGTTCTTCAAAGTTTGTTCAAATATGAACCATACCCAGGATTTAGTGCGAGTGTGCAAGCGAAGATAAAAGCAGATATCAAAGAGTGGAAAGAACAGAAGGAAAAGCTGACAACCTGCCTAAAGTTCAAGACAACTCTTGCCTAGATCTCCCTTTGTAGTAGTATGAAGAGAAAAACATTTTGAAATCTTTACGTGATATTTGTTAGGAATCACGAACTTTCACAATGATATGATATTGTCTATTTTGAGCATAAACTCTCATGAAGACATGACTCTGATACCATGTTAGAAATCACGAACCTCCACACTAGTATGATATTGTCCACTGCTCTCATGGCATAAGCTCCCTCTCAACAATCCTCGACAATAGACGATGTTTTGCTTTTCAACCTTGATTTGTCATTCTACTATGGTTTGTAATGTAACAGAGTACATAAAATGAATGAAGAAGACACAGGTGCGATGACTTACCTGTTAAATAAGAACTCCAAACGAATGCACA ATGGGGAAGACTGGTTTGTTTGATCTGGAGAGGCATTTCGCCTTCTATGGCGCTTATCACAGCAACCCAGTCAACATTTTCATTCATGTTCTGTTTGTGTGGCCAATTTTCTTTACCACCCTCGCGGGGTCCAATGCCGCTTTGCCTTGCTTGATTTGTTGGGTTGGAGAAAGCATACTCGCCTTTAGACTTGGTTATTCTCAGACCTGGAAGATAGTACTGACTGCTCAGTTGTTCTGTTGGACCAATCAGTTAATAGACCATGGAGTATTTGAGAAACGAGCACCGGCTTTGTTAGACAATCTTGCTCAACCTTTTCTAATGGCTCCATTCTTTGTATTTTTTGAGGTATTTCTTCTCTGGTTATTCGGAGAGTTACTTGTCGGTGTTGATATTGAAGCAACTTTGTTGTTTCTGATGTTTGGTGTCAGGTTCTTCAAAGTTTGTTCAAATATGAACCATACCCAGGATTTAGTGCGAGTGTGCAAGCGAAGATAA MGKTGLFDLERHFAFYGAYHSNPVNIFIHVLFVWPIFFTTLAGSNAALPCLICWVGESILAFRLGYSQTWKIVLTAQLFCWTNQLIDHGVFEKRAPALLDNLAQPFLMAPFFVFFEVFLLWLFGELLVGVDIEATLLFLMFGVRFFKVCSNMNHTQDLVRVCKRR Homology
BLAST of Carg17954 vs. NCBI nr
Match: KAG7023203.1 (SPAC16E8.02, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 342.4 bits (877), Expect = 2.1e-90 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of Carg17954 vs. NCBI nr
Match: KAG6589515.1 (hypothetical protein SDJN03_14938, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 238.4 bits (607), Expect = 4.3e-59 Identity = 117/134 (87.31%), Postives = 117/134 (87.31%), Query Frame = 0
BLAST of Carg17954 vs. NCBI nr
Match: KAG6587548.1 (hypothetical protein SDJN03_16113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45 Identity = 100/162 (61.73%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Carg17954 vs. NCBI nr
Match: XP_022933403.1 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita moschata] >KAG7021523.1 SPAC16E8.02 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45 Identity = 100/162 (61.73%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Carg17954 vs. NCBI nr
Match: XP_022972978.1 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita maxima]) HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45 Identity = 99/162 (61.11%), Postives = 105/162 (64.81%), Query Frame = 0
BLAST of Carg17954 vs. ExPASy Swiss-Prot
Match: O13737 (2-hydroxy-palmitic acid dioxygenase mpo1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mpo1 PE=3 SV=2) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11 Identity = 49/146 (33.56%), Postives = 61/146 (41.78%), Query Frame = 0
BLAST of Carg17954 vs. ExPASy Swiss-Prot
Match: P25338 (2-hydroxy-palmitic acid dioxygenase MPO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPO1 PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 6.0e-11 Identity = 47/140 (33.57%), Postives = 61/140 (43.57%), Query Frame = 0
BLAST of Carg17954 vs. ExPASy TrEMBL
Match: A0A6J1F4N0 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita moschata OX=3662 GN=LOC111440831 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 5.9e-46 Identity = 100/162 (61.73%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Carg17954 vs. ExPASy TrEMBL
Match: A0A6J1IBP8 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita maxima OX=3661 GN=LOC111471498 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 7.7e-46 Identity = 99/162 (61.11%), Postives = 105/162 (64.81%), Query Frame = 0
BLAST of Carg17954 vs. ExPASy TrEMBL
Match: A0A0A0LP54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009840 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 3.2e-44 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Carg17954 vs. ExPASy TrEMBL
Match: A0A5A7UQ13 (Putative endoplasmic reticulum membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002550 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.2e-44 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Carg17954 vs. ExPASy TrEMBL
Match: A0A1S3BV50 (uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Cucumis melo OX=3656 GN=LOC103494003 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.2e-44 Identity = 97/162 (59.88%), Postives = 104/162 (64.20%), Query Frame = 0
BLAST of Carg17954 vs. TAIR 10
Match: AT1G18720.1 (Protein of unknown function (DUF962) ) HSP 1 Score: 150.2 bits (378), Expect = 1.4e-36 Identity = 80/162 (49.38%), Postives = 89/162 (54.94%), Query Frame = 0
BLAST of Carg17954 vs. TAIR 10
Match: AT1G74440.1 (Protein of unknown function (DUF962) ) HSP 1 Score: 142.9 bits (359), Expect = 2.3e-34 Identity = 76/164 (46.34%), Postives = 87/164 (53.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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