Homology
BLAST of Carg17953 vs. NCBI nr
Match:
KAG7023204.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS
Sbjct: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 524
KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 523
BLAST of Carg17953 vs. NCBI nr
Match:
KAG6589516.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 522/523 (99.81%), Postives = 523/523 (100.00%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MIVLNGGKSNLARSLFSRV+IKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS
Sbjct: 1 MIVLNGGKSNLARSLFSRVQIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 524
KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 523
BLAST of Carg17953 vs. NCBI nr
Match:
XP_022921850.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1071.2 bits (2769), Expect = 2.8e-309
Identity = 521/523 (99.62%), Postives = 521/523 (99.62%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS
Sbjct: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYG LKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGGLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDND GKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDSGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 524
KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 523
BLAST of Carg17953 vs. NCBI nr
Match:
XP_023516362.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1049.3 bits (2712), Expect = 1.1e-302
Identity = 511/523 (97.71%), Postives = 516/523 (98.66%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MIVLNGGKSNLARSL SRVEIKFPHFQLLLPKFIWSSDRKTPT+AIPNG YFSKEQRFLS
Sbjct: 1 MIVLNGGKSNLARSLCSRVEIKFPHFQLLLPKFIWSSDRKTPTEAIPNGSYFSKEQRFLS 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCSAVKDLNQ+HAR I+SGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG
Sbjct: 61 LFKQCSAVKDLNQVHARTIRSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKI GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLGKQLHVN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYG LKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGSLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAVE+AREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT
Sbjct: 301 YAKCGAVEEAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 524
KVRKSMQRKGVQKPEPGNSFLEINPCRKLEM+TVENYNNAE N
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVENYNNAERN 523
BLAST of Carg17953 vs. NCBI nr
Match:
XP_022987183.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima] >XP_022987184.1 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 1043.5 bits (2697), Expect = 6.1e-301
Identity = 509/523 (97.32%), Postives = 512/523 (97.90%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MIVLNGGKSNLA SL SRVEIKFPHFQLLLPK+IWSSD KTPTD IPNG YFSKEQRFLS
Sbjct: 1 MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCSAVKDLNQLHAR IQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKI GQLGSIML KQLH N
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FLGVLCACNHGGKVEEGRRYFDLMTKHC+IQPTVKHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 524
KVRKSMQRKGVQKPEPGNSFLEINPCRKLEM+TVENYNNAE N
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVENYNNAERN 523
BLAST of Carg17953 vs. ExPASy Swiss-Prot
Match:
Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)
HSP 1 Score: 375.9 bits (964), Expect = 7.2e-103
Identity = 196/466 (42.06%), Postives = 292/466 (62.66%), Query Frame = 0
Query: 56 QRFLSLFKQCSAVKDLNQLHARIIQSGFDQ---NLFVLGKLIEFCAVSAHGDMNYAVAVF 115
QR SL + CS + L QLHA +++ + + LF+ GK+++ S+ D+NYA VF
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108
Query: 116 NRIENPDGFLWNTMIRGFGR-ISNLPKAFEFYKRMLEKGIAA-DNFTFSFLLKICGQLGS 175
+ IEN F+WNT+IR +S +AF Y++MLE+G ++ D TF F+LK C +
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168
Query: 176 IMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDC 235
GKQ+H I+K G VYV N LIH+YG + LAR +FDEMP+ LV+WN++ID
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228
Query: 236 HVSCGMYNEALALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVK---DNDR 295
V G Y+ AL LF +M Q EPD T+ +SAC+ LG+L G W H+ + D D
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288
Query: 296 GKTIAVFNSLIDMYAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSN 355
+ V NSLI+MY KCG++ A ++F +++ +WN MI+G ATHG E+A+ F
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348
Query: 356 MLAEK-IVTPDGVTFLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGR 415
M+ ++ V P+ VTF+G+L ACNH G V +GR+YFD+M + I+P ++HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408
Query: 416 AGFVEEAYQLIRSMPMECNAVIWRTLL-AACRMHGNVKLGERVRSHVLEIEPDHSSD--- 475
AG++ EA ++ SMPM+ +AVIWR+LL A C+ +V+L E + +++ + D+ S
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468
Query: 476 ----YVLLANIYASSGQWNEMMKVRKSMQRKGVQKPEPGNSFLEIN 505
YVLL+ +YAS+ +WN++ VRK M G++K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510
BLAST of Carg17953 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 370.5 bits (950), Expect = 3.0e-101
Identity = 186/442 (42.08%), Postives = 285/442 (64.48%), Query Frame = 0
Query: 66 SAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVS--AHGDMNYAVAVFNRIENP-DGFL 125
S++ L Q+HA I+ G + LGK + F VS + M+YA VF++IE P + F+
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 126 WNTMIRGFGRISNLPKAFEFYKRMLEKG-IAADNFTFSFLLKICGQLGSIMLGKQLHVNI 185
WNT+IRG+ I N AF Y+ M G + D T+ FL+K + + LG+ +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 186 LKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEAL 245
++ G S +YV+N+L+H+Y DV A +FD+MP+ LVAWN+VI+ G EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 246 ALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDMY 305
AL+ +M G++PD T+V +SAC+ +GAL G+ VH ++ + + N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 306 AKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVTF 365
A+CG VE+A+ +F+ KN V+W ++I+GLA +G ++A+ LF M + + + P +TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 366 LGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSMP 425
+G+L AC+H G V+EG YF M + I+P ++H+G MVD+L RAG V++AY+ I+SMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 426 MECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMMK 485
M+ N VIWRTLL AC +HG+ L E R +L++EP+HS DYVLL+N+YAS +W+++ K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 486 VRKSMQRKGVQKPEPGNSFLEI 504
+RK M R GV+K PG+S +E+
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468
BLAST of Carg17953 vs. ExPASy Swiss-Prot
Match:
Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 364.8 bits (935), Expect = 1.7e-99
Identity = 185/451 (41.02%), Postives = 280/451 (62.08%), Query Frame = 0
Query: 56 QRFLSLFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVS-AHGDMNYAVAVFNR 115
Q + L +C+++++L Q+ A I+S + FV KLI FC S M+YA +F
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 89
Query: 116 IENPDGFLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLG 175
+ PD ++N+M RG+ R +N + F + +LE GI DN+TF LLK C ++ G
Sbjct: 90 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 149
Query: 176 KQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSC 235
+QLH +KLGLD +VYV TLI+MY +DV AR +FD + +P +V +N +I +
Sbjct: 150 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 209
Query: 236 GMYNEALALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVF 295
NEAL+LF +M ++P+E TL+ +S+C+ LG+LD G+W+H + K + K + V
Sbjct: 210 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 269
Query: 296 NSLIDMYAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIV 355
+LIDM+AKCG+++DA +F K+ W+ MI+ A HG E ++ +F M +E V
Sbjct: 270 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-V 329
Query: 356 TPDGVTFLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAY 415
PD +TFLG+L AC+H G+VEEGR+YF M I P++KHYGSMVD+L RAG +E+AY
Sbjct: 330 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 389
Query: 416 QLIRSMPMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSG 475
+ I +P+ ++WR LLAAC H N+ L E+V + E++ H DYV+L+N+YA +
Sbjct: 390 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 449
Query: 476 QWNEMMKVRKSMQ-RKGVQKPEPGNSFLEIN 505
+W + +RK M+ RK V+ PG S +E+N
Sbjct: 450 KWEYVDSLRKVMKDRKAVK--VPGCSSIEVN 476
BLAST of Carg17953 vs. ExPASy Swiss-Prot
Match:
Q9C6T2 (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)
HSP 1 Score: 354.8 bits (909), Expect = 1.7e-96
Identity = 186/486 (38.27%), Postives = 293/486 (60.29%), Query Frame = 0
Query: 21 IKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLSLFKQCSAVKDLNQLHARIIQ 80
IK P Q LL S D T + N + KEQ L L K+C + + Q+HAR I+
Sbjct: 2 IKAPILQSLLA----SRDDLTHNPEVNN--FGGKEQECLYLLKRCHNIDEFKQVHARFIK 61
Query: 81 -SGFDQNLFVLGKLIEFCAVSA-HGDMNYAVAVFNRIENPDGFLWNTMIRGFGRISNLPK 140
S F + F ++ CA S MNYA ++F I++P F +NTMIRG+ + + +
Sbjct: 62 LSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEE 121
Query: 141 AFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLIH 200
A FY M+++G DNFT+ LLK C +L SI GKQ+H + KLGL++ V+V+N+LI+
Sbjct: 122 ALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLIN 181
Query: 201 MYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEALALFLQML-QSGVEPDEA 260
MYGR +++L+ +F+++ +W++++ GM++E L LF M ++ ++ +E+
Sbjct: 182 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 241
Query: 261 TLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNAT 320
+V + AC+ GAL+ G +H + N I V SL+DMY KCG ++ A +F
Sbjct: 242 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 301
Query: 321 SGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVTFLGVLCACNHGGKVEEG 380
+N +T++ MI GLA HG+ E AL +FS M+ E + PD V ++ VL AC+H G V+EG
Sbjct: 302 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL-EPDHVVYVSVLNACSHSGLVKEG 361
Query: 381 RRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLAACR 440
RR F M K ++PT +HYG +VD+LGRAG +EEA + I+S+P+E N VIWRT L+ CR
Sbjct: 362 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 421
Query: 441 MHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMMKVRKSMQRKGVQKPEPG 500
+ N++LG+ +L++ + DY+L++N+Y+ W+++ + R + KG+ K PG
Sbjct: 422 VRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGL-KQTPG 479
Query: 501 NSFLEI 504
S +E+
Sbjct: 482 FSIVEL 479
BLAST of Carg17953 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 352.4 bits (903), Expect = 8.5e-96
Identity = 172/482 (35.68%), Postives = 283/482 (58.71%), Query Frame = 0
Query: 55 EQRFLSLFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNR 114
E F+ ++ + + +++A II G Q+ F++ K+++FC DM+YA +FN+
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQ 69
Query: 115 IENPDGFLWNTMIRGFGRISNLPKAFEFYKRMLEKGI-AADNFTFSFLLKICGQLGSIML 174
+ NP+ FL+N++IR + S YK++L K D FTF F+ K C LGS L
Sbjct: 70 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129
Query: 175 GKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNT------- 234
GKQ+H ++ K G HV N LI MY + D+ A +FDEM + +++WN+
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189
Query: 235 ------------------------VIDCHVSCGMYNEALALFLQMLQSGVEPDEATLVVT 294
+I + G Y EA+ F +M +G+EPDE +L+
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249
Query: 295 VSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNATSGKNI 354
+ +C+ LG+L+ G+W+H + + K V N+LI+MY+KCG + A ++F GK++
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309
Query: 355 VTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVTFLGVLCACNHGGKVEEGRRYFD 414
++W+TMI G A HG+ A+ F+ M K V P+G+TFLG+L AC+H G +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAK-VKPNGITFLGLLSACSHVGMWQEGLRYFD 369
Query: 415 LMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLAACRMHGNV 474
+M + I+P ++HYG ++D+L RAG +E A ++ ++MPM+ ++ IW +LL++CR GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429
Query: 475 KLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMMKVRKSMQRKGVQKPEPGNSFLE 505
+ H++E+EP+ +YVLLANIYA G+W ++ ++RK ++ + ++K PG S +E
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487
BLAST of Carg17953 vs. ExPASy TrEMBL
Match:
A0A6J1E6Y6 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111429989 PE=4 SV=1)
HSP 1 Score: 1071.2 bits (2769), Expect = 1.4e-309
Identity = 521/523 (99.62%), Postives = 521/523 (99.62%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS
Sbjct: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYG LKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGGLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDND GKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDSGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 524
KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 523
BLAST of Carg17953 vs. ExPASy TrEMBL
Match:
A0A6J1JI60 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484809 PE=4 SV=1)
HSP 1 Score: 1043.5 bits (2697), Expect = 3.0e-301
Identity = 509/523 (97.32%), Postives = 512/523 (97.90%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MIVLNGGKSNLA SL SRVEIKFPHFQLLLPK+IWSSD KTPTD IPNG YFSKEQRFLS
Sbjct: 1 MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCSAVKDLNQLHAR IQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKI GQLGSIML KQLH N
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVK NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FLGVLCACNHGGKVEEGRRYFDLMTKHC+IQPTVKHYGSMVDILGRAGFVEEAYQLIRSM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYNNAETN 524
KVRKSMQRKGVQKPEPGNSFLEINPCRKLEM+TVENYNNAE N
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVENYNNAERN 523
BLAST of Carg17953 vs. ExPASy TrEMBL
Match:
A0A6J1C0S9 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007228 PE=4 SV=1)
HSP 1 Score: 899.4 bits (2323), Expect = 6.9e-258
Identity = 435/521 (83.49%), Postives = 468/521 (89.83%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFI---WSSDRKTPTDAIPNGCYFSKEQR 60
MIV+ KSN A SL S++ IKFPHF LL PKFI +SSD + TDA PNG F+KE+R
Sbjct: 1 MIVIARRKSNFAVSLCSQIRIKFPHFPLLFPKFIFSFFSSDSEVTTDARPNGRDFAKEKR 60
Query: 61 FLSLFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIEN 120
LSLFKQCS VKDLNQ+HARI+Q+GFDQNLFV+ KLIEFCAVS HGDMNYAV FNRIEN
Sbjct: 61 LLSLFKQCSTVKDLNQIHARIVQTGFDQNLFVIAKLIEFCAVSDHGDMNYAVLAFNRIEN 120
Query: 121 PDGFLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQL 180
PDGFLWNTMIRGFGRIS L +AFEFYKRMLEKGI+ADNFTFSFLLKI GQ+GS++LGKQL
Sbjct: 121 PDGFLWNTMIRGFGRISKLQEAFEFYKRMLEKGISADNFTFSFLLKISGQMGSLILGKQL 180
Query: 181 HVNILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMY 240
HVNILKLGL+SHVYVRNTLIHMYG LKD+K ARNLF EMPKP LVAWNTVIDCHVSCGMY
Sbjct: 181 HVNILKLGLESHVYVRNTLIHMYGMLKDIKTARNLFVEMPKPDLVAWNTVIDCHVSCGMY 240
Query: 241 NEALALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSL 300
EAL LF +M QSG+EPDEATLVVTVSACSALGALD GRWVHSHVK NDRGKT+AVFNSL
Sbjct: 241 EEALGLFFRMFQSGIEPDEATLVVTVSACSALGALDSGRWVHSHVKHNDRGKTVAVFNSL 300
Query: 301 IDMYAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPD 360
IDMYAKCGAVEDA ++FN KN VTWNTMIM LATHGD EDALTLFS ML EK+ PD
Sbjct: 301 IDMYAKCGAVEDALDIFNTMGSKNRVTWNTMIMALATHGDAEDALTLFSKMLTEKLENPD 360
Query: 361 GVTFLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLI 420
VTFLGVLCACNHGG+VEEGRRYFDLMTKH N+QPT+KHYGSMVD+LGRAGFVEEAYQLI
Sbjct: 361 DVTFLGVLCACNHGGEVEEGRRYFDLMTKHFNVQPTLKHYGSMVDMLGRAGFVEEAYQLI 420
Query: 421 RSMPMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWN 480
RSMPMECNAVIWRTLLAACR+HGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YA+SGQWN
Sbjct: 421 RSMPMECNAVIWRTLLAACRLHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYATSGQWN 480
Query: 481 EMMKVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVENYN 519
EMMK+RKSMQRKGVQKPEPGNS+LEINP RKLEMETVEN N
Sbjct: 481 EMMKIRKSMQRKGVQKPEPGNSYLEINPHRKLEMETVENCN 521
BLAST of Carg17953 vs. ExPASy TrEMBL
Match:
A0A5A7UQ05 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002560 PE=4 SV=1)
HSP 1 Score: 896.3 bits (2315), Expect = 5.9e-257
Identity = 432/505 (85.54%), Postives = 460/505 (91.09%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MI++NG K NLA SL S +IKF FQL++P+FIW+S KT TD IPNG YF+KEQ +
Sbjct: 1 MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCS +K LNQLHARII+ GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRI L AFEFYKRMLEKGI ADNFTFSFLLKI GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYGRLKDV +ARNLFDE+PK LVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRW+HSHV NDRGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAV+ AREMFNA SGKN+VTWNTMIMGLATHGD EDALTLFSNML EK+ TPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FL VLCACNHGGKVEEGRRYFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAAC+MHGNVKLGERV SHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINP 506
K RKSMQ+KGV+KPEPGNS+LEINP
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINP 505
BLAST of Carg17953 vs. ExPASy TrEMBL
Match:
A0A1S3BWU9 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494002 PE=4 SV=1)
HSP 1 Score: 896.3 bits (2315), Expect = 5.9e-257
Identity = 432/505 (85.54%), Postives = 460/505 (91.09%), Query Frame = 0
Query: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
MI++NG K NLA SL S +IKF FQL++P+FIW+S KT TD IPNG YF+KEQ +
Sbjct: 1 MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60
Query: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
LFKQCS +K LNQLHARII+ GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120
Query: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
FLWNTMIRGFGRI L AFEFYKRMLEKGI ADNFTFSFLLKI GQLGSIMLGKQLHVN
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180
Query: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
ILKLGLDSHVYVRNTLIHMYGRLKDV +ARNLFDE+PK LVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
Query: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
L LFLQMLQSGVEPDEATLVVTVSACSALGALDFGRW+HSHV NDRGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300
Query: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
YAKCGAV+ AREMFNA SGKN+VTWNTMIMGLATHGD EDALTLFSNML EK+ TPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
FL VLCACNHGGKVEEGRRYFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
Query: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
PMECNAVIWRTLLAAC+MHGNVKLGERV SHVLEIEPDHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
Query: 481 KVRKSMQRKGVQKPEPGNSFLEINP 506
K RKSMQ+KGV+KPEPGNS+LEINP
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINP 505
BLAST of Carg17953 vs. TAIR 10
Match:
AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 375.9 bits (964), Expect = 5.1e-104
Identity = 196/466 (42.06%), Postives = 292/466 (62.66%), Query Frame = 0
Query: 56 QRFLSLFKQCSAVKDLNQLHARIIQSGFDQ---NLFVLGKLIEFCAVSAHGDMNYAVAVF 115
QR SL + CS + L QLHA +++ + + LF+ GK+++ S+ D+NYA VF
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108
Query: 116 NRIENPDGFLWNTMIRGFGR-ISNLPKAFEFYKRMLEKGIAA-DNFTFSFLLKICGQLGS 175
+ IEN F+WNT+IR +S +AF Y++MLE+G ++ D TF F+LK C +
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168
Query: 176 IMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDC 235
GKQ+H I+K G VYV N LIH+YG + LAR +FDEMP+ LV+WN++ID
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228
Query: 236 HVSCGMYNEALALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVK---DNDR 295
V G Y+ AL LF +M Q EPD T+ +SAC+ LG+L G W H+ + D D
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288
Query: 296 GKTIAVFNSLIDMYAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSN 355
+ V NSLI+MY KCG++ A ++F +++ +WN MI+G ATHG E+A+ F
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348
Query: 356 MLAEK-IVTPDGVTFLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGR 415
M+ ++ V P+ VTF+G+L ACNH G V +GR+YFD+M + I+P ++HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408
Query: 416 AGFVEEAYQLIRSMPMECNAVIWRTLL-AACRMHGNVKLGERVRSHVLEIEPDHSSD--- 475
AG++ EA ++ SMPM+ +AVIWR+LL A C+ +V+L E + +++ + D+ S
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468
Query: 476 ----YVLLANIYASSGQWNEMMKVRKSMQRKGVQKPEPGNSFLEIN 505
YVLL+ +YAS+ +WN++ VRK M G++K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510
BLAST of Carg17953 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 370.5 bits (950), Expect = 2.2e-102
Identity = 186/442 (42.08%), Postives = 285/442 (64.48%), Query Frame = 0
Query: 66 SAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVS--AHGDMNYAVAVFNRIENP-DGFL 125
S++ L Q+HA I+ G + LGK + F VS + M+YA VF++IE P + F+
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 126 WNTMIRGFGRISNLPKAFEFYKRMLEKG-IAADNFTFSFLLKICGQLGSIMLGKQLHVNI 185
WNT+IRG+ I N AF Y+ M G + D T+ FL+K + + LG+ +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 186 LKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEAL 245
++ G S +YV+N+L+H+Y DV A +FD+MP+ LVAWN+VI+ G EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 246 ALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDMY 305
AL+ +M G++PD T+V +SAC+ +GAL G+ VH ++ + + N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 306 AKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVTF 365
A+CG VE+A+ +F+ KN V+W ++I+GLA +G ++A+ LF M + + + P +TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 366 LGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSMP 425
+G+L AC+H G V+EG YF M + I+P ++H+G MVD+L RAG V++AY+ I+SMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 426 MECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMMK 485
M+ N VIWRTLL AC +HG+ L E R +L++EP+HS DYVLL+N+YAS +W+++ K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 486 VRKSMQRKGVQKPEPGNSFLEI 504
+RK M R GV+K PG+S +E+
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468
BLAST of Carg17953 vs. TAIR 10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 364.8 bits (935), Expect = 1.2e-100
Identity = 185/451 (41.02%), Postives = 280/451 (62.08%), Query Frame = 0
Query: 56 QRFLSLFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVS-AHGDMNYAVAVFNR 115
Q + L +C+++++L Q+ A I+S + FV KLI FC S M+YA +F
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 89
Query: 116 IENPDGFLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLG 175
+ PD ++N+M RG+ R +N + F + +LE GI DN+TF LLK C ++ G
Sbjct: 90 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 149
Query: 176 KQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSC 235
+QLH +KLGLD +VYV TLI+MY +DV AR +FD + +P +V +N +I +
Sbjct: 150 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 209
Query: 236 GMYNEALALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVF 295
NEAL+LF +M ++P+E TL+ +S+C+ LG+LD G+W+H + K + K + V
Sbjct: 210 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 269
Query: 296 NSLIDMYAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIV 355
+LIDM+AKCG+++DA +F K+ W+ MI+ A HG E ++ +F M +E V
Sbjct: 270 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-V 329
Query: 356 TPDGVTFLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAY 415
PD +TFLG+L AC+H G+VEEGR+YF M I P++KHYGSMVD+L RAG +E+AY
Sbjct: 330 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 389
Query: 416 QLIRSMPMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSG 475
+ I +P+ ++WR LLAAC H N+ L E+V + E++ H DYV+L+N+YA +
Sbjct: 390 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 449
Query: 476 QWNEMMKVRKSMQ-RKGVQKPEPGNSFLEIN 505
+W + +RK M+ RK V+ PG S +E+N
Sbjct: 450 KWEYVDSLRKVMKDRKAVK--VPGCSSIEVN 476
BLAST of Carg17953 vs. TAIR 10
Match:
AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 354.8 bits (909), Expect = 1.2e-97
Identity = 186/486 (38.27%), Postives = 293/486 (60.29%), Query Frame = 0
Query: 21 IKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLSLFKQCSAVKDLNQLHARIIQ 80
IK P Q LL S D T + N + KEQ L L K+C + + Q+HAR I+
Sbjct: 2 IKAPILQSLLA----SRDDLTHNPEVNN--FGGKEQECLYLLKRCHNIDEFKQVHARFIK 61
Query: 81 -SGFDQNLFVLGKLIEFCAVSA-HGDMNYAVAVFNRIENPDGFLWNTMIRGFGRISNLPK 140
S F + F ++ CA S MNYA ++F I++P F +NTMIRG+ + + +
Sbjct: 62 LSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEE 121
Query: 141 AFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLIH 200
A FY M+++G DNFT+ LLK C +L SI GKQ+H + KLGL++ V+V+N+LI+
Sbjct: 122 ALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLIN 181
Query: 201 MYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEALALFLQML-QSGVEPDEA 260
MYGR +++L+ +F+++ +W++++ GM++E L LF M ++ ++ +E+
Sbjct: 182 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 241
Query: 261 TLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNAT 320
+V + AC+ GAL+ G +H + N I V SL+DMY KCG ++ A +F
Sbjct: 242 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 301
Query: 321 SGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVTFLGVLCACNHGGKVEEG 380
+N +T++ MI GLA HG+ E AL +FS M+ E + PD V ++ VL AC+H G V+EG
Sbjct: 302 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL-EPDHVVYVSVLNACSHSGLVKEG 361
Query: 381 RRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLAACR 440
RR F M K ++PT +HYG +VD+LGRAG +EEA + I+S+P+E N VIWRT L+ CR
Sbjct: 362 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 421
Query: 441 MHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMMKVRKSMQRKGVQKPEPG 500
+ N++LG+ +L++ + DY+L++N+Y+ W+++ + R + KG+ K PG
Sbjct: 422 VRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGL-KQTPG 479
Query: 501 NSFLEI 504
S +E+
Sbjct: 482 FSIVEL 479
BLAST of Carg17953 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 352.4 bits (903), Expect = 6.1e-97
Identity = 172/482 (35.68%), Postives = 283/482 (58.71%), Query Frame = 0
Query: 55 EQRFLSLFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNR 114
E F+ ++ + + +++A II G Q+ F++ K+++FC DM+YA +FN+
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQ 69
Query: 115 IENPDGFLWNTMIRGFGRISNLPKAFEFYKRMLEKGI-AADNFTFSFLLKICGQLGSIML 174
+ NP+ FL+N++IR + S YK++L K D FTF F+ K C LGS L
Sbjct: 70 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129
Query: 175 GKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNT------- 234
GKQ+H ++ K G HV N LI MY + D+ A +FDEM + +++WN+
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189
Query: 235 ------------------------VIDCHVSCGMYNEALALFLQMLQSGVEPDEATLVVT 294
+I + G Y EA+ F +M +G+EPDE +L+
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249
Query: 295 VSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDMYAKCGAVEDAREMFNATSGKNI 354
+ +C+ LG+L+ G+W+H + + K V N+LI+MY+KCG + A ++F GK++
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309
Query: 355 VTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVTFLGVLCACNHGGKVEEGRRYFD 414
++W+TMI G A HG+ A+ F+ M K V P+G+TFLG+L AC+H G +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAK-VKPNGITFLGLLSACSHVGMWQEGLRYFD 369
Query: 415 LMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSMPMECNAVIWRTLLAACRMHGNV 474
+M + I+P ++HYG ++D+L RAG +E A ++ ++MPM+ ++ IW +LL++CR GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429
Query: 475 KLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMMKVRKSMQRKGVQKPEPGNSFLE 505
+ H++E+EP+ +YVLLANIYA G+W ++ ++RK ++ + ++K PG S +E
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7023204.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... | [more] |
KAG6589516.1 | 0.0e+00 | 99.81 | Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... | [more] |
XP_022921850.1 | 2.8e-309 | 99.62 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
XP_023516362.1 | 1.1e-302 | 97.71 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... | [more] |
XP_022987183.1 | 6.1e-301 | 97.32 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
Match Name | E-value | Identity | Description | |
Q0WQW5 | 7.2e-103 | 42.06 | Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
A8MQA3 | 3.0e-101 | 42.08 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Q8LK93 | 1.7e-99 | 41.02 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
Q9C6T2 | 1.7e-96 | 38.27 | Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 8.5e-96 | 35.68 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E6Y6 | 1.4e-309 | 99.62 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
A0A6J1JI60 | 3.0e-301 | 97.32 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
A0A6J1C0S9 | 6.9e-258 | 83.49 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like OS=Mom... | [more] |
A0A5A7UQ05 | 5.9e-257 | 85.54 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BWU9 | 5.9e-257 | 85.54 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
Match Name | E-value | Identity | Description | |
AT1G59720.1 | 5.1e-104 | 42.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G21065.1 | 2.2e-102 | 42.08 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G02980.1 | 1.2e-100 | 41.02 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G31920.1 | 1.2e-97 | 38.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 6.1e-97 | 35.68 | mitochondrial editing factor 21 | [more] |