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Carg17944 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAGATCAAAGAGAGAGAGAAATGGAGAATCGTTCTTACGAACCGGAGAAAAACGCCAAAGACGTCTCACTGCAGGAACTCAGAGACATGCTGGCAGAGTTCGCTCGAGTACGAGGATGGGAACAATACCACAGCCCAAGAAACCTTCTCCTAGCACTTGTAATCAATCAAACAAACAAAAAAAAAACACATTGAAATTAACAACTCGATCACCAATTTCGACCTAAAAACAAACACAATCAGTATAGAATATGAAAAATCTTACATGTTGCTATTGTCGTTGTTGTTGATGATGATGGAATTGCCATTGCTTGCAGGTTGGTGAGGTCGGAGAGCTATCGGAGATATTCCAGTGGAAGGGGGAGGTGGAGAGGGGGCTGCCAAACTGGAGCGCGGCGGAGAGAGAGCATTTGGAAGAAGAGGTGTCTGATGTGTTACTCTATTTGGTGCGTCTCGCCGATGTGTGTGGCCTTGATTTGGGCCATGCCGCTCTCTCAAAGCTCGTCAAAAATGCCAACAAGTACCCTGTCGCCGCTTTCGCGCGCGCGCTTCCATGAACTTCGCGCCCCCTTCTCTTTCCTCCCTTCGCTGCTTTTCTGTTTCTGTACTCGTTTCTGCTTCATATTGATATGCACGGAGATCCGTCTCAGTTTACTGGATACTCACACCGCTCTTATTCTTTAAATATTCTCCTT ACAGATCAAAGAGAGAGAGAAATGGAGAATCGTTCTTACGAACCGGAGAAAAACGCCAAAGACGTCTCACTGCAGGAACTCAGAGACATGCTGGCAGAGTTCGCTCGAGTACGAGGATGGGAACAATACCACAGCCCAAGAAACCTTCTCCTAGCACTTGTTGGTGAGGTCGGAGAGCTATCGGAGATATTCCAGTGGAAGGGGGAGGTGGAGAGGGGGCTGCCAAACTGGAGCGCGGCGGAGAGAGAGCATTTGGAAGAAGAGGTGTCTGATGTGTTACTCTATTTGGTGCGTCTCGCCGATGTGTGTGGCCTTGATTTGGGCCATGCCGCTCTCTCAAAGCTCGTCAAAAATGCCAACAAGTACCCTGTCGCCGCTTTCGCGCGCGCGCTTCCATGAACTTCGCGCCCCCTTCTCTTTCCTCCCTTCGCTGCTTTTCTGTTTCTGTACTCGTTTCTGCTTCATATTGATATGCACGGAGATCCGTCTCAGTTTACTGGATACTCACACCGCTCTTATTCTTTAAATATTCTCCTT ATGGAGAATCGTTCTTACGAACCGGAGAAAAACGCCAAAGACGTCTCACTGCAGGAACTCAGAGACATGCTGGCAGAGTTCGCTCGAGTACGAGGATGGGAACAATACCACAGCCCAAGAAACCTTCTCCTAGCACTTGTTGGTGAGGTCGGAGAGCTATCGGAGATATTCCAGTGGAAGGGGGAGGTGGAGAGGGGGCTGCCAAACTGGAGCGCGGCGGAGAGAGAGCATTTGGAAGAAGAGGTGTCTGATGTGTTACTCTATTTGGTGCGTCTCGCCGATGTGTGTGGCCTTGATTTGGGCCATGCCGCTCTCTCAAAGCTCGTCAAAAATGCCAACAAGTACCCTGTCGCCGCTTTCGCGCGCGCGCTTCCATGA MENRSYEPEKNAKDVSLQELRDMLAEFARVRGWEQYHSPRNLLLALVGEVGELSEIFQWKGEVERGLPNWSAAEREHLEEEVSDVLLYLVRLADVCGLDLGHAALSKLVKNANKYPVAAFARALP Homology
BLAST of Carg17944 vs. NCBI nr
Match: KAG6589527.1 (dCTP pyrophosphatase 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023212.1 dCTP pyrophosphatase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251.9 bits (642), Expect = 2.9e-63 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of Carg17944 vs. NCBI nr
Match: XP_022921755.1 (dCTP pyrophosphatase 1-like [Cucurbita moschata] >XP_023515610.1 dCTP pyrophosphatase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62 Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0
BLAST of Carg17944 vs. NCBI nr
Match: XP_022987438.1 (dCTP pyrophosphatase 1-like [Cucurbita maxima]) HSP 1 Score: 247.7 bits (631), Expect = 5.4e-62 Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Carg17944 vs. NCBI nr
Match: XP_004138182.1 (dCTP pyrophosphatase 1 [Cucumis sativus] >KGN63700.1 hypothetical protein Csa_013122 [Cucumis sativus]) HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61 Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg17944 vs. NCBI nr
Match: XP_038880679.1 (dCTP pyrophosphatase 1-like [Benincasa hispida]) HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60 Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy Swiss-Prot
Match: Q91VC0 (dCTP pyrophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Dctpp1 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 4.5e-27 Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy Swiss-Prot
Match: Q9QY93 (dCTP pyrophosphatase 1 OS=Mus musculus OX=10090 GN=Dctpp1 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 5.9e-27 Identity = 59/116 (50.86%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy Swiss-Prot
Match: Q32KY6 (dCTP pyrophosphatase 1 OS=Bos taurus OX=9913 GN=DCTPP1 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26 Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy Swiss-Prot
Match: Q9H773 (dCTP pyrophosphatase 1 OS=Homo sapiens OX=9606 GN=DCTPP1 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26 Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy TrEMBL
Match: A0A6J1E6P9 (dCTP pyrophosphatase 1 OS=Cucurbita moschata OX=3662 GN=LOC111429911 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 6.9e-63 Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy TrEMBL
Match: A0A6J1JJF8 (dCTP pyrophosphatase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484985 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.6e-62 Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy TrEMBL
Match: A0A0A0LP76 (dCTP pyrophosphatase 1 OS=Cucumis sativus OX=3659 GN=Csa_1G011520 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 9.9e-62 Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy TrEMBL
Match: A0A5A7UWT3 (dCTP pyrophosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002730 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60 Identity = 120/125 (96.00%), Postives = 121/125 (96.80%), Query Frame = 0
BLAST of Carg17944 vs. ExPASy TrEMBL
Match: A0A1S3BWI5 (dCTP pyrophosphatase 1 OS=Cucumis melo OX=3656 GN=LOC103494015 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60 Identity = 120/125 (96.00%), Postives = 121/125 (96.80%), Query Frame = 0
BLAST of Carg17944 vs. TAIR 10
Match: AT3G25400.1 (CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). ) HSP 1 Score: 152.5 bits (384), Expect = 2.2e-37 Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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