![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg17940 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAGCTTTCAAACCTGCTTGATCATCCTCAGATTGGTCTTCTGCTTCTTGAGTCTTTGTCCATTGTTGCCCATTTTGCTCTGTTCCATCCTGAGAATCAACAAGTTCTTCGCTGGGGAAAGAGCCCTACCATACTCCACAAGGTTAGTATACTGCCAACCTATCCCATCCCTAGTTTCATATTCGGATGAAATTGACGAATGATATTTGTGTTCTTAGGTGCGCGACCTGCCGTTCGTATTCTGTATTCTTCAGCGACCCCGAACTGATGCCAGTGTTGGCTAGTACCCTGGTCGCTGCTTGTTGAGTGTGCGCAGAACAAGTCCGTTGTCCTGCAGGAACTAAGCATAGACATGCTGCTCTCGTTATTGAGATCCTGCAAAAATAATCCGCTAGTGTCAGCTGTGCAATCCAATTCAACACAAGAACGATGAATCAAATGAATGTAACCCAAATGGTGTCGAGTCTCCTAGTAGGAAGGCCGACCACTACATAAGCAGAAGCAAGCTACCTTTCTTTG TTTAAGCTTTCAAACCTGCTTGATCATCCTCAGATTGGTCTTCTGCTTCTTGAGTCTTTGTCCATTGTTGCCCATTTTGCTCTGTTCCATCCTGAGAATCAACAAGTTCTTCGCTGGGGAAAGAGCCCTACCATACTCCACAAGGTGCGCGACCTGCCGTTCGTATTCTGTATTCTTCAGCGACCCCGAACTGATGCCAGTGTTGGCTAGTACCCTGGTCGCTGCTTGTTGAGTGTGCGCAGAACAAGTCCGTTGTCCTGCAGGAACTAAGCATAGACATGCTGCTCTCGTTATTGAGATCCTGCAAAAATAATCCGCTAGTGTCAGCTGTGCAATCCAATTCAACACAAGAACGATGAATCAAATGAATGTAACCCAAATGGTGTCGAGTCTCCTAGTAGGAAGGCCGACCACTACATAAGCAGAAGCAAGCTACCTTTCTTTG TTTAAGCTTTCAAACCTGCTTGATCATCCTCAGATTGGTCTTCTGCTTCTTGAGTCTTTGTCCATTGTTGCCCATTTTGCTCTGTTCCATCCTGAGAATCAACAAGTTCTTCGCTGGGGAAAGAGCCCTACCATACTCCACAAGGTGCGCGACCTGCCGTTCGTATTCTGTATTCTTCAGCGACCCCGAACTGATGCCAGTGTTGGCTAG FKLSNLLDHPQIGLLLLESLSIVAHFALFHPENQQVLRWGKSPTILHKVRDLPFVFCILQRPRTDASVG Homology
BLAST of Carg17940 vs. NCBI nr
Match: KAG7023217.1 (hypothetical protein SDJN02_14242, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 146.7 bits (369), Expect = 7.2e-32 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Carg17940 vs. NCBI nr
Match: KAG6589532.1 (SNAP25-likeous protein SNAP33, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16 Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0
BLAST of Carg17940 vs. NCBI nr
Match: XP_022972181.1 (uncharacterized protein LOC111470776 isoform X2 [Cucurbita maxima]) HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Carg17940 vs. NCBI nr
Match: XP_023529956.1 (uncharacterized protein LOC111792645 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Carg17940 vs. NCBI nr
Match: XP_022930561.1 (uncharacterized protein LOC111436972 isoform X1 [Cucurbita moschata] >XP_022930570.1 uncharacterized protein LOC111436972 isoform X1 [Cucurbita moschata]) HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Carg17940 vs. ExPASy TrEMBL
Match: A0A6J1I587 (uncharacterized protein LOC111470776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470776 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.6e-15 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Carg17940 vs. ExPASy TrEMBL
Match: A0A6J1EX75 (uncharacterized protein LOC111436972 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436972 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.6e-15 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Carg17940 vs. ExPASy TrEMBL
Match: A0A6J1I597 (uncharacterized protein LOC111470776 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470776 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.6e-15 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Carg17940 vs. ExPASy TrEMBL
Match: A0A6J1ERA8 (uncharacterized protein LOC111436972 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436972 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.6e-15 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Carg17940 vs. ExPASy TrEMBL
Match: A0A6J1BYK0 (uncharacterized protein LOC111006915 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006915 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14 Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|