![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg17938 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATCAGGCTGTCATAAGCAAAGGCAACCATTTGGAGCAAAGGGAAAGGTTGGGGCTAAGTCGGGCACCCAAGCCACGGTCCTCGCGCGCCCCACATCCTGAGCCAACCAACTCACTTCAGAAAGTTGAGGTTTGTCTATTTACAGAAAAAGCACTTCAATTGGAAGCACTTTCCTCTAAGCATATTTGAAAATATTTAACAAGAGATTTGTTGTAAACCAGGTGGAAAAGGTGAAACAAGAGGATGCTCTTTCAGATTTGAGCAATATATTGGGAGAGCTTAAAGGAATGGCTGTTGATATGGGAACTGAACTAGACAGGTGCGTTGTTATGTTCTTAGAGAAAAGCTTCTTGTTTTTCATTTTCCATAAACATTTCTAAAATTGTTTACGGGTTAACGAATACAATTATATCTTCCGTTATTAAAAAAAGAATGAAATGAGAAACAAGAACCGAGAATGTTACTAAACGGGTTGAAATGCTAATTTTTCTTCCTCTGGAATCTAAACCCGTGTGATGTGGTAAAGGGAGGATATTTGACGACCAAAAGCCTTTGTAGCACTAGTGTTATACAAAAGTCATGGGTGAAAATTGGTCTGATGGTTCGGAAGAAACCTATTCCCGTTCTCTGTTCCAAACATTCCTAAAAGTAGATGACAAGTTTTAAATCTCATCTTTGTTAAATGGTTTTTGAATCTATGTTACTATATTCCAGACAAAATAAGGCTCTGGATAACTTGTTTGACGACGCGGACGAGATCACGGTTCGTGTTGATAATGCTAATCGGCGTGCTCGGCACTTGCTTAGAAAGTAGATTTGAAATTTGCAAGGTCTCATCTGGTTTGGCATCAGCAAATATGATGGTATATGCTTTGACTGACCGGCTTTAGCTTCTTCCCTTTTGGTTCTCAGTGTCTTCCTCTCTGTCTGTATGTCTTGTCTTCATCCGAAAAGAAACGTAAAATTTCCACTCTTCTGCTAAAAACAGTTGTGAAATGGTTTGGTTATTGCAAGCCCAATCTGGTTGATGATGTAATTTGCTCATATCTCTATTTACAACTTTTATATTTA GATCAGGCTGTCATAAGCAAAGGCAACCATTTGGAGCAAAGGGAAAGGTTGGGGCTAAGTCGGGCACCCAAGCCACGGTCCTCGCGCGCCCCACATCCTGAGCCAACCAACTCACTTCAGAAAGTTGAGGTGGAAAAGGTGAAACAAGAGGATGCTCTTTCAGATTTGAGCAATATATTGGGAGAGCTTAAAGGAATGGCTGTTGATATGGGAACTGAACTAGACAGACAAAATAAGGCTCTGGATAACTTGTTTGACGACGCGGACGAGATCACGGTTCGTGTTGATAATGCTAATCGGCGTGCTCGGCACTTGCTTAGAAAGTAGATTTGAAATTTGCAAGGTCTCATCTGGTTTGGCATCAGCAAATATGATGGTATATGCTTTGACTGACCGGCTTTAGCTTCTTCCCTTTTGGTTCTCAGTGTCTTCCTCTCTGTCTGTATGTCTTGTCTTCATCCGAAAAGAAACGTAAAATTTCCACTCTTCTGCTAAAAACAGTTGTGAAATGGTTTGGTTATTGCAAGCCCAATCTGGTTGATGATGTAATTTGCTCATATCTCTATTTACAACTTTTATATTTA GATCAGGCTGTCATAAGCAAAGGCAACCATTTGGAGCAAAGGGAAAGGTTGGGGCTAAGTCGGGCACCCAAGCCACGGTCCTCGCGCGCCCCACATCCTGAGCCAACCAACTCACTTCAGAAAGTTGAGGTGGAAAAGGTGAAACAAGAGGATGCTCTTTCAGATTTGAGCAATATATTGGGAGAGCTTAAAGGAATGGCTGTTGATATGGGAACTGAACTAGACAGACAAAATAAGGCTCTGGATAACTTGTTTGACGACGCGGACGAGATCACGGTTCGTGTTGATAATGCTAATCGGCGTGCTCGGCACTTGCTTAGAAAGTAG DQAVISKGNHLEQRERLGLSRAPKPRSSRAPHPEPTNSLQKVEVEKVKQEDALSDLSNILGELKGMAVDMGTELDRQNKALDNLFDDADEITVRVDNANRRARHLLRK Homology
BLAST of Carg17938 vs. NCBI nr
Match: KAG7023218.1 (putative SNAP25-likeous protein SNAP30, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg17938 vs. NCBI nr
Match: XP_022921394.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >XP_022921396.1 putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >XP_022921397.1 putative SNAP25 homologous protein SNAP30 [Cucurbita moschata]) HSP 1 Score: 206.8 bits (525), Expect = 9.1e-50 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17938 vs. NCBI nr
Match: XP_023516514.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo] >XP_023516515.1 putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo] >XP_023516516.1 putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.8 bits (525), Expect = 9.1e-50 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17938 vs. NCBI nr
Match: XP_022987568.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita maxima] >XP_022987569.1 putative SNAP25 homologous protein SNAP30 [Cucurbita maxima] >XP_022987570.1 putative SNAP25 homologous protein SNAP30 [Cucurbita maxima]) HSP 1 Score: 204.9 bits (520), Expect = 3.5e-49 Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17938 vs. NCBI nr
Match: XP_022134601.1 (SNAP25 homologous protein SNAP33 [Momordica charantia]) HSP 1 Score: 201.4 bits (511), Expect = 3.8e-48 Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy Swiss-Prot
Match: Q9LMG8 (Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana OX=3702 GN=SNAP30 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-26 Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy Swiss-Prot
Match: Q9S7P9 (SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana OX=3702 GN=SNAP33 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 7.3e-26 Identity = 61/109 (55.96%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy Swiss-Prot
Match: Q9SD96 (SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana OX=3702 GN=SNAP29 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.3e-18 Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy Swiss-Prot
Match: Q17QQ3 (Synaptosomal-associated protein 25 OS=Bos taurus OX=9913 GN=SNAP25 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.8e-07 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy Swiss-Prot
Match: P60878 (Synaptosomal-associated protein 25 OS=Gallus gallus OX=9031 GN=SNAP25 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.8e-07 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy TrEMBL
Match: A0A6J1E197 (putative SNAP25 homologous protein SNAP30 OS=Cucurbita moschata OX=3662 GN=LOC111429687 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.4e-50 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy TrEMBL
Match: A0A6J1JJU0 (putative SNAP25 homologous protein SNAP30 OS=Cucurbita maxima OX=3661 GN=LOC111485094 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49 Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy TrEMBL
Match: A0A6J1BY92 (SNAP25 homologous protein SNAP33 OS=Momordica charantia OX=3673 GN=LOC111006828 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.9e-48 Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy TrEMBL
Match: A0A5A7US66 (Putative SNAP25-like proteinous protein SNAP30 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002820 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.6e-46 Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Carg17938 vs. ExPASy TrEMBL
Match: A0A1S3BVT2 (putative SNAP25 homologous protein SNAP30 OS=Cucumis melo OX=3656 GN=LOC103494024 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.6e-46 Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Carg17938 vs. TAIR 10
Match: AT1G13890.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 30 ) HSP 1 Score: 119.0 bits (297), Expect = 2.3e-27 Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 0
BLAST of Carg17938 vs. TAIR 10
Match: AT5G61210.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 33 ) HSP 1 Score: 117.9 bits (294), Expect = 5.2e-27 Identity = 61/109 (55.96%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of Carg17938 vs. TAIR 10
Match: AT5G07880.1 (synaptosomal-associated protein SNAP25-like 29 ) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19 Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Carg17938 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 ) HSP 1 Score: 45.1 bits (105), Expect = 4.3e-05 Identity = 27/70 (38.57%), Postives = 36/70 (51.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|