Carg17937 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17937
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein 346-like
Location	Carg_Chr10: 996306 .. 999593 (-)
RNA-Seq Expression	Carg17937
Synteny	Carg17937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCATCAGCAGCAGCACCCTCCTCCTCCTCCTCCTTCCTCTTCTTCTTCTTCTTCCGTGCCTTTTTATTTCCCTCCTCAGCCTCACATTGTGAATGGTAATCCTTCTTCTTTCGCTCATTTTCCTCAGCCTGTTTTACCCCCCGGAGTCGCTTCCGAGCCGGTCCTGCACCCTCCCGGCACCGAACCTTATTCCAATTCCGCCATATTAACCTCGACCTATGTTGGATTGGAGGGCCAACCGCAATTTTATGCTGACCCAACTGTTGCTTCTCATAATTGGGTCGTTCCGCAGTCTGACCCCGCTGGATTTGTGAGTGTTCTTTTTTTCTTTTTCCTTATTTATCTGTTTCAATATTCTACGTGTCAATTTCCTTGTGTTTGGTGGTCTATCTTCCATTTAGTTTGGATTGTTTCAGGGTTTGTGGAGGCTGAGGTCCTTTTGTCTCTGTTATTTGATTCTTGTGTTCTTAGTGGGAAATTTGCGCGCACAAGACTGCGAATTGTTCTGCCGTATGAACTGGGTTCCCCCATCCCCACGCCATGGATTCCTTTTAAAATAAGCTTTGTTAGTAAGAAAGTGTGTGATATTAAATCATTTTGATGTTTCATTTTACATACTAAGTGGATGCTTTTGATATCTTTTTTTTTTTCGAATTACTTTTGAAAATTTAGTGTGAAAAGTGCTTTTTTTCGTGTTGATAAAAGTGATTTTGGCCATACCAAATCAATGTCTTTTCAAGCCTAGTCTATGTGATGATGTATCTTATTTATGCATATCATCTAAAATCTATTGCTTGAAAATTTTCTTAAGTTCTTTTGGGTCAGAGTCAAAAACTAAATTGAGCTTGGTCATGACTTAGACATCTGTCCTATGGTAATATGTTCAATTTTTCCATCCCCACGTTGTTTGAATTCAAAAAATTATTCTTAAACATAACATAAGTGATGATGGATCTTATTTTTGCGTCTACTATAAGCTCAATTGCATGAATGGAGATAACTTTTTTCTCACAACAAATTTTATGTGAGTGATGGCTTTATATTACAATCATCCTATGCATCAAGACAGTCAGAAGTTCATGTCGATGCTTTTTTTTAAAAAAAAAATCGTCTTTTTGTGTAGGCATTCATATCTTTGCTTGAGAATCAGATAGCTTCCACGAGTTCTAATTCTGTACTGGAAGGCAATTGGGCAACTCAATCCTTGGCACACAATGCAACTAGGACGAAACATGTGAAATCCAAGTTCACCCAGCCTGTGCGATGTGAAGTTTGCAAAATTAACTGCAATAGTAAAGATGTTTTTGATAAACATGTAATGGGGAAGAAACATAAGAAGAATTTGGAAGCACAAAACAGTTCCTTGACGGGAAGTACTTCCTCTGATAGGAACATATATATGCTAAACCAAACGGGCAGTGTCAGTGGTCAAGTGGCAGAGGGGGCTCTGGATGTGCCTGCTGCTATTAAAGGTCAAAATACAAAGAAGCGAAAACTTACAGATAGTGGTACGAAAGCTGATTCTGCGAGGGTTTGTACTGTATGCAACGTTGTTTGCAATAGTCAAGAGGTTTTTGATAAGCATCTGAGTGGGAAAAAGCACGCAGCTCAGGTGAGTTACACTGGTGTTTTCGGCTAGTATAAACTGTGGTACTCTGGTCATCATTTGCTTTTTCTTAGAGTTTTTTTCTTTCAATACTTGTTTACTTTTATTTATCCCTTGAATATAAATACGAATGCATTATCTAGTGGTAAAAAAAGCATGAAATAGAAGTCATTGTCCATTTCCATGGGGTTATTGGAAGGTTTGCTTTGTTTCTTTTGTGATCCTTATTTTTTAGACAAAATACAGTATTCTTCAATCAAACGACTTTCTATCTATCCAGGGTTATTTCTTCAGATCTATAATATTGTCTTCTACTAGGTAATTATTGATAGGATACCCGTTAGTATATCAAAACAAAGGATTCAGAGAAGTATTTGGAAAAGCAAGGGGCAATGGGTATCGTTGAAAGTTTTTTGCCATATGTAAAAATAGATCCATATGTTGAATGGTACAAGGTGGTTGGGTTGTTTAATTTTAGTTTTTGTTCTTATTTCAATCTATTTAGGTCTTTCTGGCTATTATTCACCACCTTGGCATATGTATAGGACACTTCTGTTGCATCCCTTTCATCATTGTAGATGAAAGGTGTCTTCAATTAGGGGGTCTTAGTTGTGAAACATCGTTCCTCTGTGCATCGAGTCAGCTTAGTGATGATGGGTGCTTCCTCGAGTGATCAAGACTACGTAGTTGTTTGGTGCATGGTACTCTACTGATCACAAATCTAATATGCTATACAATCAGAAGCTGCTGCTATTCTTCTAGTCATTGTCAAGTGAAAACCATGAGCTTTGGTGGGATTTTGGCTACTAAGTTAGAGCTGTTGCTTTCTGGTCATATATCTCTTTATTAAAACTTCAACTTTCCTGCTGAATAGGCTGTCTTAACATCCCAAAATCCCTATGCTGCTGCAATCCGGTCTCAGTATGATGGCAGCTCGAAGAAGAAACCGAAAAAGAACAAGGTCGTTCAGTTTGCCTGGTGTGAGGTTTGCAAGATCAGCTGTAACAGCAATGAAATCTATGCCAAGCATCTATCAGGAAAGAAACACTTGAAGAACATAGAAAAAGCAGAAAAGGGATGGAGTGATGCAGGTGCTTCGAACGCTCTGCAATCGGCAACAGAGCCAATTATCGGGCCAACGGAAAACCCATCTACCAACAACCCAAGTAGTGATGATATACAGAAAACACAGAAGAGTTCAGCAGCTCAAACACCAGAAGATCTGGAGACGAAGAAACGCAAGATTGTGGAAAGTGGTACGGCTGCAGATTCTGTTAGAACCTGCAGCATTTGCAATGTGGTCTGCAATAGCCAGACAGTTTTTGATTCTCATCTGTCTGGCCAGAAACATGCTTCCATGATGAAGAAACAAGGTGTTTCTGGAATGTCAATGCTAGTTCCTCCTTTAGTAACTGCACTTCCTAACTAGTCTCATCGGAAAAATCCATTCCGTTCTCGCACCAAATCACTGTGTATTTGTTTTCTGATGTTCCCATATCTTCTTCTGTGTGCTGTGTATTCTTGTACTCCGAGTTGTGGAGCTAAATCGTCGGTGGGGGGCGGAGGGATATCATAGATTTCTAATTACAGACAGTGATTTTGCAGTTGTAAACTAAATCATAGATCATGCTACTTGGAAATTATGACCAAGTCTCTAATTCCTTAAGAAATCATATT

mRNA sequence

ATGTTCCATCAGCAGCAGCACCCTCCTCCTCCTCCTCCTTCCTCTTCTTCTTCTTCTTCCGTGCCTTTTTATTTCCCTCCTCAGCCTCACATTGTGAATGGTAATCCTTCTTCTTTCGCTCATTTTCCTCAGCCTGTTTTACCCCCCGGAGTCGCTTCCGAGCCGGTCCTGCACCCTCCCGGCACCGAACCTTATTCCAATTCCGCCATATTAACCTCGACCTATGTTGGATTGGAGGGCCAACCGCAATTTTATGCTGACCCAACTGTTGCTTCTCATAATTGGGTCGTTCCGCAGTCTGACCCCGCTGGATTTGCATTCATATCTTTGCTTGAGAATCAGATAGCTTCCACGAGTTCTAATTCTGTACTGGAAGGCAATTGGGCAACTCAATCCTTGGCACACAATGCAACTAGGACGAAACATGTGAAATCCAAGTTCACCCAGCCTGTGCGATGTGAAGTTTGCAAAATTAACTGCAATAGTAAAGATGTTTTTGATAAACATGTAATGGGGAAGAAACATAAGAAGAATTTGGAAGCACAAAACAGTTCCTTGACGGGAAGTACTTCCTCTGATAGGAACATATATATGCTAAACCAAACGGGCAGTGTCAGTGGTCAAGTGGCAGAGGGGGCTCTGGATGTGCCTGCTGCTATTAAAGGTCAAAATACAAAGAAGCGAAAACTTACAGATAGTGGTACGAAAGCTGATTCTGCGAGGGTTTGTACTGTATGCAACGTTGTTTGCAATAGTCAAGAGGTTTTTGATAAGCATCTGAGTGGGAAAAAGCACGCAGCTCAGGCTGTCTTAACATCCCAAAATCCCTATGCTGCTGCAATCCGGTCTCAGTATGATGGCAGCTCGAAGAAGAAACCGAAAAAGAACAAGGTCGTTCAGTTTGCCTGGTGTGAGGTTTGCAAGATCAGCTGTAACAGCAATGAAATCTATGCCAAGCATCTATCAGGAAAGAAACACTTGAAGAACATAGAAAAAGCAGAAAAGGGATGGAGTGATGCAGGTGCTTCGAACGCTCTGCAATCGGCAACAGAGCCAATTATCGGGCCAACGGAAAACCCATCTACCAACAACCCAAGTAGTGATGATATACAGAAAACACAGAAGAGTTCAGCAGCTCAAACACCAGAAGATCTGGAGACGAAGAAACGCAAGATTGTGGAAAGTGGTACGGCTGCAGATTCTGTTAGAACCTGCAGCATTTGCAATGTGGTCTGCAATAGCCAGACAGTTTTTGATTCTCATCTGTCTGGCCAGAAACATGCTTCCATGATGAAGAAACAAGGTGTTTCTGGAATGTCAATGCTAGTTCCTCCTTTAGTAACTGCACTTCCTAACTAGTCTCATCGGAAAAATCCATTCCGTTCTCGCACCAAATCACTGTGTATTTGTTTTCTGATGTTCCCATATCTTCTTCTGTGTGCTGTGTATTCTTGTACTCCGAGTTGTGGAGCTAAATCGTCGGTGGGGGGCGGAGGGATATCATAGATTTCTAATTACAGACAGTGATTTTGCAGTTGTAAACTAAATCATAGATCATGCTACTTGGAAATTATGACCAAGTCTCTAATTCCTTAAGAAATCATATT

Coding sequence (CDS)

ATGTTCCATCAGCAGCAGCACCCTCCTCCTCCTCCTCCTTCCTCTTCTTCTTCTTCTTCCGTGCCTTTTTATTTCCCTCCTCAGCCTCACATTGTGAATGGTAATCCTTCTTCTTTCGCTCATTTTCCTCAGCCTGTTTTACCCCCCGGAGTCGCTTCCGAGCCGGTCCTGCACCCTCCCGGCACCGAACCTTATTCCAATTCCGCCATATTAACCTCGACCTATGTTGGATTGGAGGGCCAACCGCAATTTTATGCTGACCCAACTGTTGCTTCTCATAATTGGGTCGTTCCGCAGTCTGACCCCGCTGGATTTGCATTCATATCTTTGCTTGAGAATCAGATAGCTTCCACGAGTTCTAATTCTGTACTGGAAGGCAATTGGGCAACTCAATCCTTGGCACACAATGCAACTAGGACGAAACATGTGAAATCCAAGTTCACCCAGCCTGTGCGATGTGAAGTTTGCAAAATTAACTGCAATAGTAAAGATGTTTTTGATAAACATGTAATGGGGAAGAAACATAAGAAGAATTTGGAAGCACAAAACAGTTCCTTGACGGGAAGTACTTCCTCTGATAGGAACATATATATGCTAAACCAAACGGGCAGTGTCAGTGGTCAAGTGGCAGAGGGGGCTCTGGATGTGCCTGCTGCTATTAAAGGTCAAAATACAAAGAAGCGAAAACTTACAGATAGTGGTACGAAAGCTGATTCTGCGAGGGTTTGTACTGTATGCAACGTTGTTTGCAATAGTCAAGAGGTTTTTGATAAGCATCTGAGTGGGAAAAAGCACGCAGCTCAGGCTGTCTTAACATCCCAAAATCCCTATGCTGCTGCAATCCGGTCTCAGTATGATGGCAGCTCGAAGAAGAAACCGAAAAAGAACAAGGTCGTTCAGTTTGCCTGGTGTGAGGTTTGCAAGATCAGCTGTAACAGCAATGAAATCTATGCCAAGCATCTATCAGGAAAGAAACACTTGAAGAACATAGAAAAAGCAGAAAAGGGATGGAGTGATGCAGGTGCTTCGAACGCTCTGCAATCGGCAACAGAGCCAATTATCGGGCCAACGGAAAACCCATCTACCAACAACCCAAGTAGTGATGATATACAGAAAACACAGAAGAGTTCAGCAGCTCAAACACCAGAAGATCTGGAGACGAAGAAACGCAAGATTGTGGAAAGTGGTACGGCTGCAGATTCTGTTAGAACCTGCAGCATTTGCAATGTGGTCTGCAATAGCCAGACAGTTTTTGATTCTCATCTGTCTGGCCAGAAACATGCTTCCATGATGAAGAAACAAGGTGTTTCTGGAATGTCAATGCTAGTTCCTCCTTTAGTAACTGCACTTCCTAACTAG

Protein sequence

MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSSNSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDSHLSGQKHASMMKKQGVSGMSMLVPPLVTALPN

Homology

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: KAG7023219.1 (Zinc finger protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 888.3 bits (2294), Expect = 2.9e-254
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0


Query: 1   MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60
           MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP
Sbjct: 1   MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60

Query: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120
           GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS
Sbjct: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120

Query: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180
           NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE
Sbjct: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180

Query: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSA 240
           AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSA
Sbjct: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSA 240

Query: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300
           RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ
Sbjct: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300

Query: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360
           FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP
Sbjct: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360

Query: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420
           STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS
Sbjct: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420

Query: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN
Sbjct: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 452

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_022922000.1 (zinc finger protein 346-like [Cucurbita moschata])

HSP 1 Score: 879.0 bits (2270), Expect = 1.7e-251
Identity = 450/452 (99.56%), Postives = 450/452 (99.56%), Query Frame = 0


Query: 1   MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60
           MFHQQQH PPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP
Sbjct: 1   MFHQQQH-PPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60

Query: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120
           GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS
Sbjct: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120

Query: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180
           NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE
Sbjct: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180

Query: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSA 240
           AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGA DVPAAIKGQNTKKRKLTDSGTKADSA
Sbjct: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGAPDVPAAIKGQNTKKRKLTDSGTKADSA 240

Query: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300
           RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ
Sbjct: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300

Query: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360
           FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP
Sbjct: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360

Query: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420
           STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS
Sbjct: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420

Query: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN
Sbjct: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 451

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: KAG6589533.1 (Zinc finger protein 346, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 876.7 bits (2264), Expect = 8.6e-251
Identity = 449/452 (99.34%), Postives = 449/452 (99.34%), Query Frame = 0


Query: 1   MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60
           MFHQQQH PPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP
Sbjct: 1   MFHQQQH-PPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60

Query: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120
           GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS
Sbjct: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120

Query: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180
           NSVLE NWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE
Sbjct: 121 NSVLESNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180

Query: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSA 240
           AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGA DVPAAIKGQNTKKRKLTDSGTKADSA
Sbjct: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGAPDVPAAIKGQNTKKRKLTDSGTKADSA 240

Query: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300
           RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ
Sbjct: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300

Query: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360
           FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP
Sbjct: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360

Query: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420
           STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS
Sbjct: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420

Query: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN
Sbjct: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 451

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_023516884.1 (zinc finger protein 346-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 869.8 bits (2246), Expect = 1.0e-248
Identity = 446/452 (98.67%), Postives = 447/452 (98.89%), Query Frame = 0


Query: 1   MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60
           MFHQQQH P PPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP
Sbjct: 1   MFHQQQH-PAPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60

Query: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120
           GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS
Sbjct: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120

Query: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180
           NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE
Sbjct: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180

Query: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSA 240
           AQNSSLTGSTSSDRNIYMLNQTGSVSGQVA+GA DVPAAIKG NTKKRKLTDS TKADSA
Sbjct: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAQGAPDVPAAIKGLNTKKRKLTDSSTKADSA 240

Query: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300
           RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ
Sbjct: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300

Query: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360
           FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP
Sbjct: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360

Query: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420
           STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS
Sbjct: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420

Query: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN
Sbjct: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 451

[Close]

BLAST of Carg17937 vs. NCBI nr
Match: XP_022988251.1 (zinc finger protein 346-like [Cucurbita maxima])

HSP 1 Score: 855.9 bits (2210), Expect = 1.6e-244
Identity = 440/453 (97.13%), Postives = 443/453 (97.79%), Query Frame = 0


Query: 1   MFHQQQH-PPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHP 60
           MFHQQQH PPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHP
Sbjct: 1   MFHQQQHPPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHP 60

Query: 61  PGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTS 120
           PGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFA ISLLENQIASTS
Sbjct: 61  PGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFALISLLENQIASTS 120

Query: 121 SNSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNL 180
           SNS+LEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNL
Sbjct: 121 SNSLLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNL 180

Query: 181 EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADS 240
           EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVA+GA DVPAAIKG NTKKRKLTDS TKADS
Sbjct: 181 EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAQGAPDVPAAIKGLNTKKRKLTDSSTKADS 240

Query: 241 ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVV 300
           ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKV+
Sbjct: 241 ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVI 300

Query: 301 QFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTEN 360
           QFAWCEVCKISCNSNEIYAKHLSGKKHLKN EKAEKG SDAGASNALQSATEPIIGPTEN
Sbjct: 301 QFAWCEVCKISCNSNEIYAKHLSGKKHLKNKEKAEKGCSDAGASNALQSATEPIIGPTEN 360

Query: 361 PSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD 420
           PSTN PSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD
Sbjct: 361 PSTNIPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD 420

Query: 421 SHLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           SHLSGQKHASMMKKQ VSGMSMLVPPLVTA PN
Sbjct: 421 SHLSGQKHASMMKKQAVSGMSMLVPPLVTAFPN 453

[Close]

BLAST of Carg17937 vs. ExPASy Swiss-Prot
Match: Q8AVN9 (Zinc finger protein 346 OS=Xenopus laevis OX=8355 GN=znf346 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-08
Identity = 85/322 (26.40%), Postives = 129/322 (40.06%), Query Frame = 0


Query: 153 CEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEG 212
           C++C    N+  + ++H  GKKHKK  E +   +T  TSS          G    Q A  
Sbjct: 164 CKLCHSTFNNPLMAEQHYAGKKHKKQ-ETKTQIMTIYTSS----------GQTPAQ-API 223

Query: 213 ALDVPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAV-- 272
            L++ + + G  +           A     C  CN+V NS E +  H+SG KH  Q +  
Sbjct: 224 PLNLNSPMPGSGS-----------AGKGFSCDKCNIVLNSIEQYQAHVSGAKHKNQLMSM 283

Query: 273 --LTSQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLK 332
             L+ +   A    S     S  K           C+ C I  NS E Y  H+SG KH  
Sbjct: 284 TPLSEEGHQAVVAPSAIASGSAGKGFS--------CDTCNIVLNSIEQYQAHISGAKHKN 343

Query: 333 NIEK----AEKGWSDAGASNALQSATEPIIGPTENPSTNNPSSDDIQKTQKSSA------ 392
           +++     +E+G + A A +A  S +    G   +  T N   + I++ Q   +      
Sbjct: 344 HLKSMTPLSEEGHTAAVAPSAFASGS---AGKGFSCDTCNIVLNSIEQYQAHISGAKHKN 403

Query: 393 ---AQTPEDLETKKRKIVESGTAADSVR---TCSICNVVCNSQTVFDSHLSGQKHASM-- 452
              + TP   E     +  S  A+ S     +C  CN+V NS   + +H+SG KH +   
Sbjct: 404 HLMSMTPLSEEGHTAAVAPSAFASGSAGKGFSCDTCNIVLNSIEQYQAHVSGAKHKNQLM 451

[Close]

BLAST of Carg17937 vs. ExPASy Swiss-Prot
Match: B0JZ85 (Zinc finger protein 346 OS=Xenopus tropicalis OX=8364 GN=znf346 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.6e-05
Identity = 52/213 (24.41%), Postives = 80/213 (37.56%), Query Frame = 0


Query: 153 CEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEG 212
           C +C +  +S  V + H  GK H KNL  +                        G V EG
Sbjct: 97  CPICNMTFSSPVVAESHYSGKTHIKNLRLRE----------------------QGGVTEG 156

Query: 213 ALD--VPAAIKGQNTKKRKLTDSGTKADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQAV 272
            L       +    T   K+ +   ++D  + C +C+   N+  + ++H +GKKH  Q  
Sbjct: 157 MLHQAKKLVVTRTPTIATKIDNRMDQSDPTKFCKLCHATFNNPLMAEQHYAGKKHKKQET 216

Query: 273 LT-------------SQNPYAAAIRSQYDGSSKKKPKKNKVVQFAWCEVCKISCNSNEIY 332
            T             +Q P A  + S   GS       +       C+ C I  NS E Y
Sbjct: 217 KTQLMTIYTSSGHTPAQAPIAINVNSPLPGSGSAGKGFS-------CDTCNIVLNSIEQY 276

Query: 333 AKHLSGKKHLKNIEK----AEKGWSDAGASNAL 347
             H+SG KH   +      +++G   AG  +AL
Sbjct: 277 QAHVSGAKHKNQLMSMTPLSKEGPPAAGGPSAL 280

[Close]

BLAST of Carg17937 vs. ExPASy Swiss-Prot
Match: Q6PCR6 (Zinc finger RNA-binding protein OS=Danio rerio OX=7955 GN=zfr PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 6.0e-05
Identity = 50/190 (26.32%), Postives = 80/190 (42.11%), Query Frame = 0


Query: 236 KADSARVCTVCNVVCNSQEVFDKHLSGKKHAAQ--AVLTSQNPYAAAIRSQYDGSSKKKP 295
           K      C VC + C   + + +HL G+KH  +  A+  SQ+       S   G S  + 
Sbjct: 319 KPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSS-----SSSSGGGSSARG 378

Query: 296 KKNKVVQFAWCEVCKISCNSNEIYAKHLSGKKHLKNIE---KAEKGWSDAGASNALQSAT 355
            +N++     CE+C +SC   + YA H+ G KH K ++   K  K       S   QS+T
Sbjct: 379 TQNQL----RCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSVVSQSST 438

Query: 356 EPIIGPTENPSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSV---RTCSI 415
                P +  S+N  SS        SS + +           ++SG+ A S    ++   
Sbjct: 439 SSTAAPNKTSSSNINSSTSTSSNASSSVSAS----------YLKSGSMAASAAQGKSSGA 489

Query: 416 CNVVCNSQTV 418
            NV  NS ++
Sbjct: 499 NNVSVNSSSI 489

[Close]

BLAST of Carg17937 vs. ExPASy TrEMBL
Match: A0A6J1E7D0 (zinc finger protein 346-like OS=Cucurbita moschata OX=3662 GN=LOC111430087 PE=4 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 8.4e-252
Identity = 450/452 (99.56%), Postives = 450/452 (99.56%), Query Frame = 0


Query: 1   MFHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60
           MFHQQQH PPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP
Sbjct: 1   MFHQQQH-PPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPP 60

Query: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120
           GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS
Sbjct: 61  GTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSS 120

Query: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180
           NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE
Sbjct: 121 NSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLE 180

Query: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSA 240
           AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGA DVPAAIKGQNTKKRKLTDSGTKADSA
Sbjct: 181 AQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGAPDVPAAIKGQNTKKRKLTDSGTKADSA 240

Query: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300
           RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ
Sbjct: 241 RVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQ 300

Query: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360
           FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP
Sbjct: 301 FAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENP 360

Query: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420
           STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS
Sbjct: 361 STNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDS 420

Query: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN
Sbjct: 421 HLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 451

[Close]

BLAST of Carg17937 vs. ExPASy TrEMBL
Match: A0A6J1JGQ0 (zinc finger protein 346-like OS=Cucurbita maxima OX=3661 GN=LOC111485559 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 7.6e-245
Identity = 440/453 (97.13%), Postives = 443/453 (97.79%), Query Frame = 0


Query: 1   MFHQQQH-PPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHP 60
           MFHQQQH PPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHP
Sbjct: 1   MFHQQQHPPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHP 60

Query: 61  PGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTS 120
           PGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFA ISLLENQIASTS
Sbjct: 61  PGTEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFALISLLENQIASTS 120

Query: 121 SNSVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNL 180
           SNS+LEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNL
Sbjct: 121 SNSLLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNL 180

Query: 181 EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADS 240
           EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVA+GA DVPAAIKG NTKKRKLTDS TKADS
Sbjct: 181 EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAQGAPDVPAAIKGLNTKKRKLTDSSTKADS 240

Query: 241 ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVV 300
           ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKV+
Sbjct: 241 ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVI 300

Query: 301 QFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTEN 360
           QFAWCEVCKISCNSNEIYAKHLSGKKHLKN EKAEKG SDAGASNALQSATEPIIGPTEN
Sbjct: 301 QFAWCEVCKISCNSNEIYAKHLSGKKHLKNKEKAEKGCSDAGASNALQSATEPIIGPTEN 360

Query: 361 PSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD 420
           PSTN PSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD
Sbjct: 361 PSTNIPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD 420

Query: 421 SHLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           SHLSGQKHASMMKKQ VSGMSMLVPPLVTA PN
Sbjct: 421 SHLSGQKHASMMKKQAVSGMSMLVPPLVTAFPN 453

[Close]

BLAST of Carg17937 vs. ExPASy TrEMBL
Match: A0A0A0LP87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012110 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.8e-190
Identity = 348/451 (77.16%), Postives = 380/451 (84.26%), Query Frame = 0


Query: 2   FHQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPG 61
           +H QQ PPPP       SSVP YFPP PHIVN NPSSF  FPQPVLPP V SEP LHPPG
Sbjct: 3   YHHQQQPPPP-------SSVPLYFPPHPHIVNANPSSFHPFPQPVLPPAVPSEPGLHPPG 62

Query: 62  TEPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSSN 121
           T+PYSNS +LTSTYVGLE QPQFYADP++ASH WV+PQ D AGFAF SLLENQIASTSSN
Sbjct: 63  TDPYSNSTVLTSTYVGLEPQPQFYADPSLASHTWVLPQLDAAGFAFKSLLENQIASTSSN 122

Query: 122 SVLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEA 181
           S+L GNW TQSLA+NATRTKHVK+KFTQPVRCEVCKI+CNSKDVFDKHVMG+KHKKNLE 
Sbjct: 123 SLLNGNWPTQSLAYNATRTKHVKTKFTQPVRCEVCKIDCNSKDVFDKHVMGRKHKKNLEV 182

Query: 182 QNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSAR 241
            NSSLT ST SD N  +LNQ G+VSGQVA+   DVPAA KG  +KKRKL D+  KAD  R
Sbjct: 183 PNSSLTSSTPSDGNTIVLNQMGNVSGQVAQVTADVPAARKGLKSKKRKLIDTSMKADCTR 242

Query: 242 VCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVVQF 301
           VCTVCN+VC SQEVFDKH SGKKHAAQA LTSQ PY  AI  QYDG+ KKK KKNKVVQ 
Sbjct: 243 VCTVCNIVCTSQEVFDKHTSGKKHAAQAALTSQVPYVTAIGPQYDGNLKKKLKKNKVVQS 302

Query: 302 AWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTENPS 361
           AWCEVCKISCNSNEIYA HLSGKKHLKN+EK +KG SD   S+  Q AT P+IGP ENP+
Sbjct: 303 AWCEVCKISCNSNEIYAVHLSGKKHLKNVEKVKKGTSDVSTSSTPQLATVPVIGPMENPA 362

Query: 362 TNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFDSH 421
            NNPSSD IQKTQ SS  QTPE+LETKKRKIV+SG+AA+SVRTC+ICNVVCNSQTVFDSH
Sbjct: 363 ANNPSSDGIQKTQTSS-TQTPEELETKKRKIVKSGSAANSVRTCTICNVVCNSQTVFDSH 422

Query: 422 LSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           L+GQKHA+MMKKQGVSGMSM+VPPL+TALPN
Sbjct: 423 LAGQKHATMMKKQGVSGMSMVVPPLITALPN 445

[Close]

BLAST of Carg17937 vs. ExPASy TrEMBL
Match: A0A5A7UWU3 (Zinc finger protein 346 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002830 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 7.7e-189
Identity = 352/454 (77.53%), Postives = 384/454 (84.58%), Query Frame = 0


Query: 3   HQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGT 62
           HQQQ PPPP    SSSSSVP Y PP PHIVN +P SF  FPQPVLPPGVASEP LHPPGT
Sbjct: 5   HQQQQPPPP----SSSSSVPLYLPPHPHIVNAHP-SFPPFPQPVLPPGVASEPGLHPPGT 64

Query: 63  EPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSSNS 122
           +PYSNSA+LTS+YVGLE QPQFYADP++ASHNW++PQ D AGFAF SLLE+QIASTSSNS
Sbjct: 65  DPYSNSAVLTSSYVGLEPQPQFYADPSLASHNWILPQPDAAGFAFKSLLESQIASTSSNS 124

Query: 123 VLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQ 182
           +L GNW  QSLA++ +RTKHVK+KFTQPVRCE+CKI+CNSKDVFDKHVMGKKHKKNL   
Sbjct: 125 LLNGNWPVQSLANSGSRTKHVKTKFTQPVRCEICKIDCNSKDVFDKHVMGKKHKKNLGVP 184

Query: 183 NSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKG----QNTKKRKLTDSGTKAD 242
           NSS  GST SD N  +LNQ G+VSGQVA+   DVPAA KG    + +KKRKL D+  KAD
Sbjct: 185 NSSRMGSTPSDGNTNVLNQMGNVSGQVAQVTADVPAARKGLMSKKMSKKRKLIDTSMKAD 244

Query: 243 SARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKV 302
             RVCTVCN+VCNSQEVFDKHLSGKKHAAQA LTS  PY AAI  QYDGS KKK KKNKV
Sbjct: 245 PVRVCTVCNIVCNSQEVFDKHLSGKKHAAQAALTSHVPYVAAIGPQYDGSLKKKLKKNKV 304

Query: 303 VQFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTE 362
           VQ AWCEVCKISCNSNEIYA HLSGKKHLKN+EK EKG SD   SNA Q AT P+IGP E
Sbjct: 305 VQSAWCEVCKISCNSNEIYAMHLSGKKHLKNVEKVEKGKSDVSTSNAPQLATVPVIGPME 364

Query: 363 NPSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVF 422
           NP  NNPSSDDIQKTQKSS  QTPE LETKKRKIV+SG AA+SVRTC+ICNVVCNSQTVF
Sbjct: 365 NPVANNPSSDDIQKTQKSS-TQTPEGLETKKRKIVKSGRAANSVRTCTICNVVCNSQTVF 424

Query: 423 DSHLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           DSHL+GQKHASMMKKQGVSGMS++VPPL+TALPN
Sbjct: 425 DSHLAGQKHASMMKKQGVSGMSIVVPPLITALPN 452

[Close]

BLAST of Carg17937 vs. ExPASy TrEMBL
Match: A0A1S3BVR6 (zinc finger protein 346 OS=Cucumis melo OX=3656 GN=LOC103494025 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 7.7e-189
Identity = 352/454 (77.53%), Postives = 384/454 (84.58%), Query Frame = 0


Query: 3   HQQQHPPPPPPSSSSSSSVPFYFPPQPHIVNGNPSSFAHFPQPVLPPGVASEPVLHPPGT 62
           HQQQ PPPP    SSSSSVP Y PP PHIVN +P SF  FPQPVLPPGVASEP LHPPGT
Sbjct: 5   HQQQQPPPP----SSSSSVPLYLPPHPHIVNAHP-SFPPFPQPVLPPGVASEPGLHPPGT 64

Query: 63  EPYSNSAILTSTYVGLEGQPQFYADPTVASHNWVVPQSDPAGFAFISLLENQIASTSSNS 122
           +PYSNSA+LTS+YVGLE QPQFYADP++ASHNW++PQ D AGFAF SLLE+QIASTSSNS
Sbjct: 65  DPYSNSAVLTSSYVGLEPQPQFYADPSLASHNWILPQPDAAGFAFKSLLESQIASTSSNS 124

Query: 123 VLEGNWATQSLAHNATRTKHVKSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQ 182
           +L GNW  QSLA++ +RTKHVK+KFTQPVRCE+CKI+CNSKDVFDKHVMGKKHKKNL   
Sbjct: 125 LLNGNWPVQSLANSGSRTKHVKTKFTQPVRCEICKIDCNSKDVFDKHVMGKKHKKNLGVP 184

Query: 183 NSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKG----QNTKKRKLTDSGTKAD 242
           NSS  GST SD N  +LNQ G+VSGQVA+   DVPAA KG    + +KKRKL D+  KAD
Sbjct: 185 NSSRMGSTPSDGNTNVLNQMGNVSGQVAQVTADVPAARKGLMSKKMSKKRKLIDTSMKAD 244

Query: 243 SARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKV 302
             RVCTVCN+VCNSQEVFDKHLSGKKHAAQA LTS  PY AAI  QYDGS KKK KKNKV
Sbjct: 245 PVRVCTVCNIVCNSQEVFDKHLSGKKHAAQAALTSHVPYVAAIGPQYDGSLKKKLKKNKV 304

Query: 303 VQFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTE 362
           VQ AWCEVCKISCNSNEIYA HLSGKKHLKN+EK EKG SD   SNA Q AT P+IGP E
Sbjct: 305 VQSAWCEVCKISCNSNEIYAMHLSGKKHLKNVEKVEKGKSDVSTSNAPQLATVPVIGPME 364

Query: 363 NPSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVF 422
           NP  NNPSSDDIQKTQKSS  QTPE LETKKRKIV+SG AA+SVRTC+ICNVVCNSQTVF
Sbjct: 365 NPVANNPSSDDIQKTQKSS-TQTPEGLETKKRKIVKSGRAANSVRTCTICNVVCNSQTVF 424

Query: 423 DSHLSGQKHASMMKKQGVSGMSMLVPPLVTALPN 453
           DSHL+GQKHASMMKKQGVSGMS++VPPL+TALPN
Sbjct: 425 DSHLAGQKHASMMKKQGVSGMSIVVPPLITALPN 452

[Close]

BLAST of Carg17937 vs. TAIR 10
Match: AT5G61190.1 (putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain )

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-21
Identity = 81/254 (31.89%), Postives = 120/254 (47.24%), Query Frame = 0


Query: 180 EAQNSSLTGSTSSDRNIYMLNQTGSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADS 239
           +AQ S  TGSTS        N   +   +  E    VP     +N K      SG   +S
Sbjct: 192 QAQPSQPTGSTS--------NAGDTKDHKTRE--KHVPRGSLQENRKNMLQHSSGATGES 251

Query: 240 ARVCTVCNVVCNSQEVFDKHLSGKKHAAQAVLTSQNPYAAAIRSQYDGSSKKKPKKNKVV 299
           A  C +CNVVC+S E F  HLS  +H +QA +       A++       S K   +  +V
Sbjct: 252 ATTCRICNVVCDSFEKFTAHLSDIRHISQAAIVESRRAQASV-------SAKPIHQAVLV 311

Query: 300 QFAWCEVCKISCNSNEIYAKHLSGKKHLKNIEKAEKGWSDAGASNALQSATEPIIGPTEN 359
           +   C+VC+IS  +N+ Y  H  GKKH  N+E        +G S  +      ++GP E 
Sbjct: 312 EPLLCKVCQISFTNNDTYKNHTYGKKHRNNLE------LQSGKSKNI------LVGPAE- 371

Query: 360 PSTNNPSSDDIQKTQKSSAAQTPEDLETKKRKIVESGTAADSVRTCSICNVVCNSQTVFD 419
                PS + ++K   +            K+ ++ES   A++   C +CNVVC SQ VF+
Sbjct: 372 -----PSKEVLEKHNMN------------KKVMIESRAQANAEFVCLMCNVVCQSQIVFN 398

Query: 420 SHLSGQKHASMMKK 434
           SHL G+KHA+M+ +
Sbjct: 432 SHLRGKKHANMLSQ 398

[Close]

BLAST of Carg17937 vs. TAIR 10
Match: AT2G24030.2 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 46.6 bits (109), Expect = 6.2e-05
Identity = 38/129 (29.46%), Postives = 55/129 (42.64%), Query Frame = 0


Query: 144 KSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSS-LTGSTSSDRNIYMLNQT 203
           K +  Q   CE+CK+    + V   H +GKKHK  +  QN +    STS         Q 
Sbjct: 206 KLRTNQKFWCEICKVGTYCQIVMRDHELGKKHKAAVTQQNETPEAASTSLSPASVTAPQP 265

Query: 204 GSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARV----CTVCNVVCNSQEVFDK 263
            ++  +V E A   P   K      ++ T   TK +  +     C  CN+  NS++    
Sbjct: 266 EAI--RVCENA--NPQGQKVDEIAAKETTGKKTKGEKKKKETVWCKTCNIQTNSEQTMRN 325

Query: 264 HLSGKKHAA 268
           H  GKKH A
Sbjct: 326 HTLGKKHMA 330

[Close]

BLAST of Carg17937 vs. TAIR 10
Match: AT2G24030.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 46.6 bits (109), Expect = 6.2e-05
Identity = 38/129 (29.46%), Postives = 55/129 (42.64%), Query Frame = 0


Query: 144 KSKFTQPVRCEVCKINCNSKDVFDKHVMGKKHKKNLEAQNSS-LTGSTSSDRNIYMLNQT 203
           K +  Q   CE+CK+    + V   H +GKKHK  +  QN +    STS         Q 
Sbjct: 287 KLRTNQKFWCEICKVGTYCQIVMRDHELGKKHKAAVTQQNETPEAASTSLSPASVTAPQP 346

Query: 204 GSVSGQVAEGALDVPAAIKGQNTKKRKLTDSGTKADSARV----CTVCNVVCNSQEVFDK 263
            ++  +V E A   P   K      ++ T   TK +  +     C  CN+  NS++    
Sbjct: 347 EAI--RVCENA--NPQGQKVDEIAAKETTGKKTKGEKKKKETVWCKTCNIQTNSEQTMRN 406

Query: 264 HLSGKKHAA 268
           H  GKKH A
Sbjct: 407 HTLGKKHMA 411

The following BLAST results are available for this feature:

BLAST of Carg17937 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023219.1	2.9e-254	100.00	Zinc finger protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022922000.1	1.7e-251	99.56	zinc finger protein 346-like [Cucurbita moschata]	[more]
KAG6589533.1	8.6e-251	99.34	Zinc finger protein 346, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516884.1	1.0e-248	98.67	zinc finger protein 346-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988251.1	1.6e-244	97.13	zinc finger protein 346-like [Cucurbita maxima]	[more]

BLAST of Carg17937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVN9	3.4e-08	26.40	Zinc finger protein 346 OS=Xenopus laevis OX=8355 GN=znf346 PE=1 SV=1	[more]
B0JZ85	1.6e-05	24.41	Zinc finger protein 346 OS=Xenopus tropicalis OX=8364 GN=znf346 PE=2 SV=2	[more]
Q6PCR6	6.0e-05	26.32	Zinc finger RNA-binding protein OS=Danio rerio OX=7955 GN=zfr PE=2 SV=2	[more]

BLAST of Carg17937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7D0	8.4e-252	99.56	zinc finger protein 346-like OS=Cucurbita moschata OX=3662 GN=LOC111430087 PE=4 ...	[more]
A0A6J1JGQ0	7.6e-245	97.13	zinc finger protein 346-like OS=Cucurbita maxima OX=3661 GN=LOC111485559 PE=4 SV...	[more]
A0A0A0LP87	1.8e-190	77.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012110 PE=4 SV=1	[more]
A0A5A7UWU3	7.7e-189	77.53	Zinc finger protein 346 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BVR6	7.7e-189	77.53	zinc finger protein 346 OS=Cucumis melo OX=3656 GN=LOC103494025 PE=4 SV=1	[more]

BLAST of Carg17937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61190.1	1.2e-21	31.89	putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain	[more]
AT2G24030.2	6.2e-05	29.46	zinc ion binding;nucleic acid binding	[more]
AT2G24030.1	6.2e-05	29.46	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 238..272 e-value: 0.0026 score: 27.0 coord: 148..182 e-value: 5.3E-4 score: 29.3 coord: 299..333 e-value: 6.2E-4 score: 29.1 coord: 400..434 e-value: 2.4E-5 score: 33.8
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 241..265 e-value: 3.7 score: 16.5 coord: 151..175 e-value: 3.6 score: 16.6 coord: 302..326 e-value: 88.0 score: 4.9 coord: 403..427 e-value: 4.7 score: 16.2
None	No IPR available	PFAM	PF12874	zf-met	coord: 152..175 e-value: 1.3E-5 score: 25.4 coord: 404..427 e-value: 3.2E-8 score: 33.7 coord: 303..326 e-value: 5.4E-7 score: 29.8 coord: 243..265 e-value: 6.1E-8 score: 32.8
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 134..183 e-value: 1.2E-9 score: 39.6 coord: 283..334 e-value: 1.1E-10 score: 42.9 coord: 219..271 e-value: 5.3E-12 score: 47.1 coord: 381..434 e-value: 1.2E-12 score: 49.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR45762:SF9	SUBFAMILY NOT NAMED	coord: 281..437
None	No IPR available	PANTHER	PTHR45762	ZINC FINGER RNA-BINDING PROTEIN	coord: 28..272 coord: 281..437
None	No IPR available	PANTHER	PTHR45762:SF9	SUBFAMILY NOT NAMED	coord: 28..272
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 135..182
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 236..268
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 399..433
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 286..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17937-RA	Carg17937-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding