Carg17881 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGACCAGCGTGAAATTGTGTGCCTTCCCTCACTGGATCTCGTCCTTCCTCTTCTCTCCTCCCGTCGACGACGAGACCGAAACGAAGAAGCAGAGAGCGCGCGAAGTTAGATTCGACGTTCAGGTTCAGCCATGGATTTTTGGAACAAAGCTCGGAATTTCGCCGAGGAAGCAGCGAAGCGCTCTCAAGAGCTGACTCTGGAAGCTGCAAGGCGTTCCCAAGAGCTCACGATTGGATCCTCTAGTTTGTCCGATATCGTTTCCGTGACTGCTAAACGCTCCAAGGAATTCGCTACTGAAGCCTCGAAGCGAGCTGATCAAATTAAAGCAGAAGCTGCTAAGCGAGCCGATCTAATCAAGCACTTGGTCGGGGGGACTCCGTCGTCTGGCGCTCTTGAGAAGAACGCTTCCGAAGTAGAGATGCAGGAGGAGGATTTGCAGAAGTTTGGAATAAACGAAGAGCTGAGGGACTTTGTCAAAGGCATCACCATGAGTACATTTCGGGATTTCCCACTCGAAGGTAACTGATTCGTTTTCTTGAATTTTCCGTTCTCTTGGCTAGTTGGTTGTAAGTTTGAGGATCATAGAACTAAGTATCAGTAGGGGGATTGGTTGGAGGTAACGCAGGGGAAGTATGTAGTCAGCGATCATCAAGCATTTAAGCTCTAGAAATGAAGATTGTTAGGCTTAACTGATACTGAATTGACGACACCGAAGGTTAAATCTCAATAGAGGGGGCCATTGAATTTGAAGAACTACTTTCATTGGCATGAACCATCCGAAGACCTTAATTGGAATAGCTGTAATATGTTCTATTTTCTCTGTCACCTAGACCTTGTTTCTAAACTGGTTTATTTCCCTTTGCGTAGATGATTCACAAGTGTCCAATATCCCCACAGTCTCAAACATTAGTCAGGATCTAACTGTGTGGCAGACGAAGCATGCAAGCCTTGTTCTTTCAACTGTCAAGGTATTACTATTATGAACATGTCACCAGTGAAGATGAATGTGGCTTTCTCTACCCACTGGAGAGGAACTTTGATTTCACAGTTCATTGTGGATGAGCTTGAGAAATGAATTTACATTTTCGTTGATAACATGCTTTGTTGCAATGTACATGCTTTTTAACCATTTTTATGTAACGTGGCAGGAAATTTCTACGTTACGTTATGAATTGTGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGCTGGTTAACAGACACATTGCACCGTAAGTTTAAGTCTTGAGTTCGAACCTTGACTCTAGCTTACTTTGAATTTTGATTACAGAAATCGTCACAGCTTCTTGATTTGTATTTCTTGTCAATTGATTCAAAGGAACAAGTTAATAAGCCTTGACTAAGTATACAATGGGGCATGGGAAACGCAAAAAATGCTTTATGTATGTGGCGATGACCTTAAGAACAAAAAGATACTGGATTGAAGACTTAAAAACTTCTTTTTTTTTTTTTTTTTTTTTTGTGTACACTTAGCTTCTTACCAATCTGTCAACTCTTTGTTTGTGTCCTGATCTTCAGGCCTTAATTTTCTTAAAGAATTTCATTAACGAAATGTCAAATTTTCTTGTTCTATATTCTTTTACTTCTGAAGCTATGAGAAAAAGTACATGGAGGATGTCATGCTGAAATCAGCTAAACAAGTTGAAGATGGAAAGAAGGAACCTGATAAAACTGAAATAACATCTAATTCTCATGAGAAGAAAAATGCTCCAACCTTGTCATCAAGTGATCAGGAGAAGAAAAATGCTCCAACCTCCTCATCAAGTGACCAAGACTTGGACCTATTTCTTCTTGGGGATCTTGGAGACAGCGATGACGGTCCAGGTACAGTGCCACAATTTATTGATGTCTGCTCTGTACTAAAGATTTCAGACAAAGAAATCATGCCTCTACTTAATCTTTAAAGTTCAAACAAAGATCTGATCCTTTGACGTTATTGATTTTGTCTATTCAAGCTTGTTAATTTTAACAGTATGACAAATTGTTGTTGTCAAGATGCTGTATTAGCAATTGGCATATATCTTTTTTAGTCCCTACTGAAGTTTTTTATCTGGCAGAACAAAAAACTGCTCACTTCTTTATCAAAAAGGAAGACACTAGAGAAATGTGGTTCTTGGATTTGAAACAAGTGATTTGAGGGAGTGGCTGCCATTGGTCATTTCCATGGCTTCAAACATTATGGTGCAATTATTAGCAATGGGCATAGCATATGCACAGTCCAGTTATATAGTCCAGTTTATACTGTTGATGTCATTTTGTCATTTGAGGTTGCTGCCACTGATATTCTTCCCGATTTTTCAGATGATGGAGATGAGGGCTTTGATGATGATTTTGACAAAATGGTTGACAGTTCGGTAAGTAGAATTTATCATTTGCTTTACGTCCCTGTTTTCACGTTTGACTAATCTCTTGTGCCTGGCATCCCAAGGTTTTCATTGAAGTTTCTTATGAATTTTGTGTTGCTATGTTGCTGAGATTTTGTGGTCATTAATTGGATTTAGAAACTCCTACCAGAGAATGTGATCATATATTTGCTTTTTTCTTTCACGATTAGAGTTTTTAATTGGATTTATAATAGGTTGATTTTAGTTCTATTCTAGGAACAATTCAAAACAACGTTCAAACGAAATCCATAATCTGAGCAAGTTCTTTCAAACAGAATTTTGTTTTTAGAAATTAATAATAGTTCGTTCCACTCTCCAACCGAGCTTTCCCTTTCGGGTTTCTCCTCAAGTTTTTTAAAATGCGTCTACTAGGGAGAAGTTTCCACACCTTTATAGAGAATGCTTCGTTCCACTCTCCAACCGATGTGGGATCTCAAAATCCACCCCCATTTCAGGGCTCAGTGTCATCGCTAGCACTCGTTCCTACCTTCAATCGATGTGGGATCTCACAATTCACCTCCCTTTAGGGCCCAACATCTTCACTGGCACACCACCCAGTGTCCACCCCCCTTCGGGGTTCAGCGTCATCGCTGGCACACCACCTGATGTCCACCCTCCTTCAGGGCTCAGCATCCTTGCTGGCACACTACTCGATGTCTACCCCATTTCGTTGGCACACAACCTGGTGTCTGGCTCTTATACCATTTGTAACGGCTCAAGCTCACCGCTAGCAAATATTGTCCTCTTTAAGCTTTCCTGTTCGGGCTTCCCTTCAAGATTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCCTTCCCCTCTCCAACTGATATGGGATCTTATAGCCATCCCTTCGAGCCCCAGCGTCCTCGCTGGTACTCGTTCTTCTCTCCAATCGATGTGGGATCTCACACAACCTCCATAGAATTTGATATCCTCTATAGAATTTGATATCGTACGAGGTATCTTGACAACCAGGGGTAGGATTAGGTAGTTGTCTCATGTGAATAGTTGAGGTGTGTAAGGTAATCTGGACACTTAGAATTCCTAATGATTACTCAGATATTTAGCTGTACTGCAGTTTCAACCTTGTAAATTCAGCTTCATGCATTACTGTAATTTGCTAGTTCTGGAAGTCAAAATCTGAAAATGTTCATTTTTCTCTTCTTGTTACCAAAATCGTATACCTATTATTTGGTAATTGAATTTTGTCTTCAATCCATAAGACGACGAGATACTAATTGTAGATGACGTTCTACTTGTTCTTATCCTAATATTGATTCATTGCTTTCGTCCATTTGGAAGTCCCCTTCTAAGGTTCATGGCTGTGGGGATCGGGTGATGTCAAATAAAGCCCAAGTCATATCACTCCATTAGATGTCAAACAAGGGCTTTGACTTAAAAAACAAAGTAATATTCTTATGGAACCAATGACAGCCAAATGCAAAAAGCTCCTCGAAAAAACACCATCAAGCCCGTTGGTTCATTCTTTGATTCCTGATAATCTGATGTCTCAGACCCATCCGTGACAGATTTTGAACACCCTATCCATGTAATCCGAATTCTTAGTTGCGCAGTACTAACTTTCTCCTAAAAGTGTTCTCAAGTGAAATACAGATTGTATTAGGATTCATGAAAAGAAATGACAAGTTGCTTTCTTTAAAAGCATTCAAGTGCTTTTTTATCTATTTTTTGTGTTTCTCTAGCCACTTTTGATAGTAAAAAATTTGACAAGTTTTTTCTAGAACCAAACACTATAATTTCTTAAGGAAAAAAAACATTTTTATTCATTCATCACTCCAAATTCACTTTTTATGTGCTGCTGAACTTTGGTGGTGGTGGAATTCTAAGTCGGATTACATTTTTATGTTTTTATCGTGTGCCTATTATTTTGTAATGAAATTTGTCTTAAACCTTCAGGATGACGAGAAAGACAAATTGTAGGAGACAGCAGCAGGAGTGTTTTCACATCAAATCATTGCTACTCATCCATTTGAAGTCGTCTTTTCCGTTCTTGGTGGCAGAGTTCAGTGGGCTAAATGATGATCCAATGAAAAACCCATTTGAAGTCCTCTTCTATCACTCCACTGAGCAGCATGTGCACCTGAACCTGTGCAGGAGAAACCGAAGCTTATATGTTCATTATTTTTTTTCCCTTCTCACACTTGCCACTGAGGGAGGTTCCCATGTACACAAATCCTGTATTATACTTGGACCTTTGGTTGATTTTGTACAGCACTCAGCACCTTAGCTTGGCCCTCTTGGTGTAGGATTAATATTTGTTTAAATTATAGGTTTAGTTCTTAAACGT AGACCAGCGTGAAATTGTGTGCCTTCCCTCACTGGATCTCGTCCTTCCTCTTCTCTCCTCCCGTCGACGACGAGACCGAAACGAAGAAGCAGAGAGCGCGCGAAGTTAGATTCGACGTTCAGGTTCAGCCATGGATTTTTGGAACAAAGCTCGGAATTTCGCCGAGGAAGCAGCGAAGCGCTCTCAAGAGCTGACTCTGGAAGCTGCAAGGCGTTCCCAAGAGCTCACGATTGGATCCTCTAGTTTGTCCGATATCGTTTCCGTGACTGCTAAACGCTCCAAGGAATTCGCTACTGAAGCCTCGAAGCGAGCTGATCAAATTAAAGCAGAAGCTGCTAAGCGAGCCGATCTAATCAAGCACTTGGTCGGGGGGACTCCGTCGTCTGGCGCTCTTGAGAAGAACGCTTCCGAAGTAGAGATGCAGGAGGAGGATTTGCAGAAGTTTGGAATAAACGAAGAGCTGAGGGACTTTGTCAAAGGCATCACCATGAGTACATTTCGGGATTTCCCACTCGAAGATGATTCACAAGTGTCCAATATCCCCACAGTCTCAAACATTAGTCAGGATCTAACTGTGTGGCAGACGAAGCATGCAAGCCTTGTTCTTTCAACTGTCAAGGAAATTTCTACGTTACGTTATGAATTGTGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGCTGGTTAACAGACACATTGCACCCTATGAGAAAAAGTACATGGAGGATGTCATGCTGAAATCAGCTAAACAAGTTGAAGATGGAAAGAAGGAACCTGATAAAACTGAAATAACATCTAATTCTCATGAGAAGAAAAATGCTCCAACCTTGTCATCAAGTGATCAGGAGAAGAAAAATGCTCCAACCTCCTCATCAAGTGACCAAGACTTGGACCTATTTCTTCTTGGGGATCTTGGAGACAGCGATGACGGTCCAGATGATGGAGATGAGGGCTTTGATGATGATTTTGACAAAATGGTTGACAGTTCGGATGACGAGAAAGACAAATTGTAGGAGACAGCAGCAGGAGTGTTTTCACATCAAATCATTGCTACTCATCCATTTGAAGTCGTCTTTTCCGTTCTTGGTGGCAGAGTTCAGTGGGCTAAATGATGATCCAATGAAAAACCCATTTGAAGTCCTCTTCTATCACTCCACTGAGCAGCATGTGCACCTGAACCTGTGCAGGAGAAACCGAAGCTTATATGTTCATTATTTTTTTTCCCTTCTCACACTTGCCACTGAGGGAGGTTCCCATGTACACAAATCCTGTATTATACTTGGACCTTTGGTTGATTTTGTACAGCACTCAGCACCTTAGCTTGGCCCTCTTGGTGTAGGATTAATATTTGTTTAAATTATAGGTTTAGTTCTTAAACGT ATGGATTTTTGGAACAAAGCTCGGAATTTCGCCGAGGAAGCAGCGAAGCGCTCTCAAGAGCTGACTCTGGAAGCTGCAAGGCGTTCCCAAGAGCTCACGATTGGATCCTCTAGTTTGTCCGATATCGTTTCCGTGACTGCTAAACGCTCCAAGGAATTCGCTACTGAAGCCTCGAAGCGAGCTGATCAAATTAAAGCAGAAGCTGCTAAGCGAGCCGATCTAATCAAGCACTTGGTCGGGGGGACTCCGTCGTCTGGCGCTCTTGAGAAGAACGCTTCCGAAGTAGAGATGCAGGAGGAGGATTTGCAGAAGTTTGGAATAAACGAAGAGCTGAGGGACTTTGTCAAAGGCATCACCATGAGTACATTTCGGGATTTCCCACTCGAAGATGATTCACAAGTGTCCAATATCCCCACAGTCTCAAACATTAGTCAGGATCTAACTGTGTGGCAGACGAAGCATGCAAGCCTTGTTCTTTCAACTGTCAAGGAAATTTCTACGTTACGTTATGAATTGTGTCCACGCATTATGAAAGAGAGAAAATTCTGGAGGATTTACTTTTTGCTGGTTAACAGACACATTGCACCCTATGAGAAAAAGTACATGGAGGATGTCATGCTGAAATCAGCTAAACAAGTTGAAGATGGAAAGAAGGAACCTGATAAAACTGAAATAACATCTAATTCTCATGAGAAGAAAAATGCTCCAACCTTGTCATCAAGTGATCAGGAGAAGAAAAATGCTCCAACCTCCTCATCAAGTGACCAAGACTTGGACCTATTTCTTCTTGGGGATCTTGGAGACAGCGATGACGGTCCAGATGATGGAGATGAGGGCTTTGATGATGATTTTGACAAAATGGTTGACAGTTCGGATGACGAGAAAGACAAATTGTAG MDFWNKARNFAEEAAKRSQELTLEAARRSQELTIGSSSLSDIVSVTAKRSKEFATEASKRADQIKAEAAKRADLIKHLVGGTPSSGALEKNASEVEMQEEDLQKFGINEELRDFVKGITMSTFRDFPLEDDSQVSNIPTVSNISQDLTVWQTKHASLVLSTVKEISTLRYELCPRIMKERKFWRIYFLLVNRHIAPYEKKYMEDVMLKSAKQVEDGKKEPDKTEITSNSHEKKNAPTLSSSDQEKKNAPTSSSSDQDLDLFLLGDLGDSDDGPDDGDEGFDDDFDKMVDSSDDEKDKL Homology
BLAST of Carg17881 vs. NCBI nr
Match: XP_022921470.1 (uncharacterized protein LOC111429736 isoform X1 [Cucurbita moschata] >KAG7023275.1 hypothetical protein SDJN02_14300 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 550.8 bits (1418), Expect = 7.1e-153 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of Carg17881 vs. NCBI nr
Match: XP_023516937.1 (uncharacterized protein LOC111780696 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 541.6 bits (1394), Expect = 4.3e-150 Identity = 293/298 (98.32%), Postives = 295/298 (98.99%), Query Frame = 0
BLAST of Carg17881 vs. NCBI nr
Match: XP_022921471.1 (uncharacterized protein LOC111429736 isoform X2 [Cucurbita moschata]) HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143 Identity = 285/298 (95.64%), Postives = 285/298 (95.64%), Query Frame = 0
BLAST of Carg17881 vs. NCBI nr
Match: KAG6589586.1 (hypothetical protein SDJN03_15009, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 516.2 bits (1328), Expect = 1.9e-142 Identity = 283/298 (94.97%), Postives = 284/298 (95.30%), Query Frame = 0
BLAST of Carg17881 vs. NCBI nr
Match: XP_038879849.1 (uncharacterized protein LOC120071581 isoform X2 [Benincasa hispida]) HSP 1 Score: 456.1 bits (1172), Expect = 2.4e-124 Identity = 254/298 (85.23%), Postives = 263/298 (88.26%), Query Frame = 0
BLAST of Carg17881 vs. ExPASy TrEMBL
Match: A0A6J1E5S1 (uncharacterized protein LOC111429736 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429736 PE=4 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.4e-153 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of Carg17881 vs. ExPASy TrEMBL
Match: A0A6J1E1H1 (uncharacterized protein LOC111429736 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429736 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144 Identity = 285/298 (95.64%), Postives = 285/298 (95.64%), Query Frame = 0
BLAST of Carg17881 vs. ExPASy TrEMBL
Match: A0A6J1EJP3 (uncharacterized protein LOC111435105 OS=Cucurbita moschata OX=3662 GN=LOC111435105 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 5.7e-124 Identity = 256/311 (82.32%), Postives = 272/311 (87.46%), Query Frame = 0
BLAST of Carg17881 vs. ExPASy TrEMBL
Match: A0A1S3BVY4 (uncharacterized protein LOC103494072 OS=Cucumis melo OX=3656 GN=LOC103494072 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 2.0e-121 Identity = 249/299 (83.28%), Postives = 263/299 (87.96%), Query Frame = 0
BLAST of Carg17881 vs. ExPASy TrEMBL
Match: A0A0A0LPE8 (BSD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015590 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 2.7e-121 Identity = 248/299 (82.94%), Postives = 264/299 (88.29%), Query Frame = 0
BLAST of Carg17881 vs. TAIR 10
Match: AT1G69030.1 (BSD domain-containing protein ) HSP 1 Score: 226.1 bits (575), Expect = 3.7e-59 Identity = 149/328 (45.43%), Postives = 215/328 (65.55%), Query Frame = 0
BLAST of Carg17881 vs. TAIR 10
Match: AT1G26300.1 (BSD domain-containing protein ) HSP 1 Score: 216.5 bits (550), Expect = 3.0e-56 Identity = 141/320 (44.06%), Postives = 205/320 (64.06%), Query Frame = 0
BLAST of Carg17881 vs. TAIR 10
Match: AT1G26300.2 (BSD domain-containing protein ) HSP 1 Score: 168.3 bits (425), Expect = 9.3e-42 Identity = 98/216 (45.37%), Postives = 145/216 (67.13%), Query Frame = 0
BLAST of Carg17881 vs. TAIR 10
Match: AT3G24820.1 (BSD domain-containing protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20 Identity = 57/149 (38.26%), Postives = 89/149 (59.73%), Query Frame = 0
BLAST of Carg17881 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein ) HSP 1 Score: 43.5 bits (101), Expect = 3.4e-04 Identity = 63/235 (26.81%), Postives = 102/235 (43.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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