Carg17770 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTGTCTTCATCTCTGGATTTTTAGCTTTCTGCACCCAGCTGACAGCAAAAACCCAAAGCTACTTCGTTGGCTGTGTGAGGAAGAAATAAGGTAATGAAATTTTATGAAGTTATGTTCTTAACAGTTATCACAAATTTTCTCAATGCTTTATTTCCGTTAGTTTCAAAGCCTTTTATCTACTGCCTTTGCATTAGCATGCTCAGTTTGTCTTCATGTCTGCTAAATCTACCATTAGCGTTAAAAATGACTTTAGTCTATGGAGGTTCTTACTGAGAGCATTGAAATAAAGACGTTTGATTTTCTATAATTTCATAATATATCTCATTTTGGTTATTCTTGAACCTCTCATCGAACTTTGGAATTAATTAATTTCAAGACAAGAACCATTTAATGCTTGATTGAAGTGACTTGAATTGTGATAGATATATGATGACAGGTCCTTGCTTTTCTGTTTTGTGGAGTTTTGTTGGCTGAATTATTTTTGCCATATGTTTCTATCTATATATTAAATACTTTTTTTTTTTCCATATATGTGAGTTTCTGACAAGCTTGCATGTACTTTGACTAATCTAATGGGACAACCACTCGACTCTGCTACATTTGGTTGCCAGACACATAAGATACTCATAAGGGGATAAAAGTGCGAAAGAGGGTGATAAGGAATCCATCCATAAGTTAAGAAGGATTACAAAAACTTTCTCCAATTGCGTTTATAAAAAGAGTCATCATTACAAAATTACTTGGCTGTTGCACTTCGAAAGGAAGCTTTATAATGGATGGCTGCCCGAACCTTCTTTCGTCTCTTGCATTATGGAGAAAATTTTATGGTTTATAAGAGCTCTGAACCTGTTCTCTTGAAGAATCTTCACTTTCTTTTTCAAAAAGTGGTAAAAACGCAGTTGCCATGGAGATTGCCTGAAGGTAGAGGAGAAACTCCAATTGGATACCAAAACTATCCAAGAATGTTCCCAGGCTATGCAGCAATATAGCCTTTTGTTCTTGAATCAAAGACAACAACGACTAAGAGATAAGGCCCAATAATGATTTTTAGTCTTTGAATAATCCAAGGTGGATTTATCCCTCCCCTTAGTGACGTTTGCAAGAAAAATATTTACTCTTGGGAGTTTGAAGAGACTTTGTTCAAGTAAGGACTCTATATTCCTTAAACTCCTAGAATATGACTCACATGAGAAAATTCTGCTGCTCTCTAAAGTCCACATCTGTTTTTCACGGTGATTGTTTGTGATTTGCATGCGGGAAATCAGCTCATTTATCTCCTTATTACAGAAAAGCCTTCTGAAATCAGGATTCTAAGTATTAGAGATAATGTTCAGATGCTCTTTGGCTGCAGTGATTTACTTTAGCCACATGATCTAATCTTGGAAAGAGAAGTTTCAAATAATTCTTTGCTGCCAAAGCATGGTTCTCTAATTTTTATTTGCAGGTGGTTTTTCATTAAGTTGCATATTGCATTAAAGTTCCATGGACATCATTTGCTAGTGCACTTCTCTTTCTTTACGAACCAACTCAACTCATTGTTTGCTTTTGGGCATCTTGTTTAATAGGCTTGAGGGTGATCTTTCCATCGGACAAATTGTCTTACCTAAATCTGAAAGGAAATCATAATTTAAAGTCAAAATCTATCTGGGACTGAGCAGCTTCTTGGCTGGTTTTCTTGGTCCAGTACTTTGTTACTGGGGAAGATGAAGGCCATTGGGATTTAAGTACTTTTGTCTGCCAGACACGAGTCTTTTTCGCCATTCTCATGAATTTTAACTTCCACAAATTCCTGGCAATATATACATAGCATCATTCTTCTTAGTATGTTTTTATTTGAACTGTGAGGAGTTCTCCATCAATCCTTTTCCATTCTGAGTTCAGCTGGTAAAGATCTAAAATATTATCTTTTTTCTAATGTAAGCTTCTAGTTCACTTAGTGGCGTAATAAAACTGCAACATTTTGTTCCCATCTCTTCAAAGATTTGGAGAAAGATTTCTAATTTTTAGCCGTCCACCACATGAGGGAATATCTACCATCCTTTCTAGGATTTCATCTCTCCATTTATTGAATTTGATGAAAACTATCGCTCTATTCTCTGTATAGACTCAGCATTCTAGCTTCATCACTCTCACATATAAGCAGTGTTTTCTTGGTTGGAAAGGATTTAACACACATCTTATAATGTATCTGTGGATCTCTTAAGAACCTTTAGCCGTTTTTCATGGAAGCATCTACTCAAAACAACTGACATTGTTTCCAAATCTATTTGCAGTATCGCCTTTGAACTGATCTTAGTCACACCTGTTTCTTGTGTAGCTTGTCTTCCTCTTGCTCGTTGTTCTCTAATTAGTTCTTTAATTGCAAAGGATGTATACTTCCCCTTCCAGAGGCTTGGGAATGATTACTTCTCTTATCATCTCTCCATTGAAATCCTTCTGGAGGCTTGGGAATAATTACCTATCTTATCATCTTTTGATGATTATTTCTGATTGAAAGGCTTTCTTCATGCAGTTTTTTTTTTTTTTTAATTGCTTCCTTATATATAGCTTTTAGGCTGCATCCTGGCCCTTAGGATGTTTTCCTTTTCTTCTATCCGCATGTACCTTTCTTCATTTCTTATAAAAAGTTCCGTTCTGTCAACTCCAGTTCAGAGGGGATAGGTAGGTTATGTTTCTTTTCATTGTTTTATAGTTATGGACTGTTGGCAAGTCTCCTCAGCCTCTGCTGATTAAGGAGAAAATGGGCTTGGCTGGAAGAGGATGACAACATGAGAGAAAAGGAGATGAAGAATCAAATTGGGTCGATTGTTTTTTTGGTAGGCAGGTAGGTATTGTTTCCTTTCATTTGTTCCATAGTGATGAACTGTTGGCATCAGCCTCCTCAGCCTTTTCTGATTAAGGATTAAACGGGCCCAGCTAGAAGAGGATGGTAACATGAGAGAAAAGGAGATGAAGAAGCAGATTGTATCGATCATTTTCAGTTTCCCCCCCTAATTTATAAAAGAAAAAGAAAGGTGGACCGTGAGGAAACAGTTATTGTAGAATTCCATTATGGTTGAAGCTCAAAATCACAACAGTTGGGAGGCATAACCAAGGAGCTTACCTTGCTCTATATTAACGTCGACAAGAAAAATATTGCTTTGTTCGAGTATTTTTTATCTGAACCAACGTGGTAGCTCCTACTCTAGCAGTTCTCTCAAAATCTAATTGTAGGTCTTAATCTCACAATGAAAGAACCATTTTTAGTCCAATATTTTTAGTACATATATGCATATGGTAATGTTACATTTCACTATGTAAATTATCTATCTATCTATCTATCTATATATATATATATATATAGTATGTTAATAAATGTTATTTTCTTATAACACACGTTAGGCATTTTTGTTAGGATAAATAAATTCATTACCAATCTCAAATAAATTTTTGTTGTGGATAGTATCTGCATTGCCAAATCTATAAGCATTCCCTTTCTTGTACATTTTTGAGACTTTCATTCATTTAAGGAGCTTCTCAGCAGCTGTTTTTCGTGGCTTCAATGAAATGTATCTTATAAATAATCTATGAAGAAGAAACAATAGAGCTCACATACATGTTTTTTTTTTCAAGCTTAATTTATTTACTGTTTGCAAGCTTAATTTATTTGGAAGGGTGTAATCTTTTCTATGGTTTGGGGTTTGGCATTTCAGCACCTTTGCTAACTAGCCAATTTGTGTGTGGCCTTGTAGGGAGAGAGATTCAGACAAGGATGGAAAGATTAACTTCAACGAGTTTTTCCATGGACTCTTTGACATGGTGAGAAATTTTGATGAGAATCACAATTCTTCACATCATTTAGAAGATTCCAGGGATGGCCCCGCCAGAAACTTGTTCAAGGTGCTAGACAAAGATAATGACGGGTAATTAAATTTATGATGTGAACAGCTTCTTCATACATGGAAACTGCAGAGTTCCTTGGCAACTTTAATGATTTCTTTGTGTTATTTTTTCTCATAGATACCTATCTGATGAAGAGCTGCTACCCATAATCGGAAAAATCCACCCTACAGAGCATTACTATGCAAAACAACAAGCGGAATATATCCTACAGCAGGTACTCATGCATGACAAAATTTTGAAACCCAAATGAAATTTGAAGAATTTTTGGCCTTGTTGTTATGATATTGCTTGGATACTGCACACAATAATGGAATAAACAATCATCTTGTAATAATACGCCCTTGTCATGAGACTCTCATGTCTGGCTGCACAAGTATTTTCTTTAATTTTGACCAATCATCCACCCGTGCATGATGCATTAAGATTTATGTAAAATCATTTTTAGAACGATTAAAATCAGTCATTAAAACACAACCATTCACCAAAGATTTCCTGTTTGAACATTGTGTAATAATGCTGCAGCAAGAGATTTCAGTTTCCCCTTGATTCATTTTATCTTTTAATGTATTGTATAGCATAATTGTTTGTGTTATTTGTTCCTCATTGATTTTGATCTGATATACCAAGTTTTTCTCTCAGCCAAAGAACATTAATATATTGTATGACATGATTTTATCTTTGGCATTTGATATAGAAAAATTTTCTTGCAAATGTTTGTTATCTCAATTAGAAAACATTACGCCTAGATCGAAATAAGACTGGAAAACATGTTCTTCGTGCCGAGTAAGCGAGTATGTCTATTGATCAACAACTCCTTTGTATCTCTACTTTTCAGGCAGATGCAAATAAAGATGGACGTCTCACCTTGGCAGAAATGATTAATCATCCATATGTATTTTACAGCGCCATTTTCAACGAAGATGACGAGGATGACTATGATCTCCACGATGAGTTTCGTTAA ATGATTTGTCTTCATCTCTGGATTTTTAGCTTTCTGCACCCAGCTGACAGCAAAAACCCAAAGCTACTTCGTTGGCTGTGTGAGGAAGAAATAAGGGAGAGAGATTCAGACAAGGATGGAAAGATTAACTTCAACGAGTTTTTCCATGGACTCTTTGACATGGTGAGAAATTTTGATGAGAATCACAATTCTTCACATCATTTAGAAGATTCCAGGGATGGCCCCGCCAGAAACTTGTTCAAGGTGCTAGACAAAGATAATGACGGATACCTATCTGATGAAGAGCTGCTACCCATAATCGGAAAAATCCACCCTACAGAGCATTACTATGCAAAACAACAAGCGGAATATATCCTACAGCAGGCAGATGCAAATAAAGATGGACGTCTCACCTTGGCAGAAATGATTAATCATCCATATGTATTTTACAGCGCCATTTTCAACGAAGATGACGAGGATGACTATGATCTCCACGATGAGTTTCGTTAA ATGATTTGTCTTCATCTCTGGATTTTTAGCTTTCTGCACCCAGCTGACAGCAAAAACCCAAAGCTACTTCGTTGGCTGTGTGAGGAAGAAATAAGGGAGAGAGATTCAGACAAGGATGGAAAGATTAACTTCAACGAGTTTTTCCATGGACTCTTTGACATGGTGAGAAATTTTGATGAGAATCACAATTCTTCACATCATTTAGAAGATTCCAGGGATGGCCCCGCCAGAAACTTGTTCAAGGTGCTAGACAAAGATAATGACGGATACCTATCTGATGAAGAGCTGCTACCCATAATCGGAAAAATCCACCCTACAGAGCATTACTATGCAAAACAACAAGCGGAATATATCCTACAGCAGGCAGATGCAAATAAAGATGGACGTCTCACCTTGGCAGAAATGATTAATCATCCATATGTATTTTACAGCGCCATTTTCAACGAAGATGACGAGGATGACTATGATCTCCACGATGAGTTTCGTTAA MICLHLWIFSFLHPADSKNPKLLRWLCEEEIRERDSDKDGKINFNEFFHGLFDMVRNFDENHNSSHHLEDSRDGPARNLFKVLDKDNDGYLSDEELLPIIGKIHPTEHYYAKQQAEYILQQADANKDGRLTLAEMINHPYVFYSAIFNEDDEDDYDLHDEFR Homology
BLAST of Carg17770 vs. NCBI nr
Match: KAG7032674.1 (hypothetical protein SDJN02_06724, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 342.4 bits (877), Expect = 2.1e-90 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Carg17770 vs. NCBI nr
Match: XP_022990888.1 (calumenin-like [Cucurbita maxima]) HSP 1 Score: 318.5 bits (815), Expect = 3.2e-83 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Carg17770 vs. NCBI nr
Match: KAG6601976.1 (Calumenin, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 317.8 bits (813), Expect = 5.5e-83 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Carg17770 vs. NCBI nr
Match: XP_022923022.1 (calumenin-like [Cucurbita moschata]) HSP 1 Score: 317.8 bits (813), Expect = 5.5e-83 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Carg17770 vs. NCBI nr
Match: XP_023536883.1 (calumenin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81 Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy Swiss-Prot
Match: Q91614 (Neuronal calcium sensor 1 OS=Xenopus laevis OX=8355 GN=ncs1 PE=2 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 2.5e-06 Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy Swiss-Prot
Match: P62167 (Neuronal calcium sensor 1 OS=Gallus gallus OX=9031 GN=NCS1 PE=1 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy Swiss-Prot
Match: P62166 (Neuronal calcium sensor 1 OS=Homo sapiens OX=9606 GN=NCS1 PE=1 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy Swiss-Prot
Match: Q8BNY6 (Neuronal calcium sensor 1 OS=Mus musculus OX=10090 GN=Ncs1 PE=1 SV=3) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy Swiss-Prot
Match: Q5RC90 (Neuronal calcium sensor 1 OS=Pongo abelii OX=9601 GN=NCS1 PE=2 SV=3) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy TrEMBL
Match: A0A6J1JUL5 (calumenin-like OS=Cucurbita maxima OX=3661 GN=LOC111487642 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy TrEMBL
Match: A0A6J1E506 (calumenin-like OS=Cucurbita moschata OX=3662 GN=LOC111430825 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 2.7e-83 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy TrEMBL
Match: A0A6J1FMS7 (calumenin-like OS=Cucurbita moschata OX=3662 GN=LOC111445607 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 9.8e-78 Identity = 140/152 (92.11%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy TrEMBL
Match: A0A5D3CVB0 (Calumenin-B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00460 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77 Identity = 139/152 (91.45%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of Carg17770 vs. ExPASy TrEMBL
Match: A0A1S3CNB9 (calumenin-B-like OS=Cucumis melo OX=3656 GN=LOC103502856 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77 Identity = 139/152 (91.45%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of Carg17770 vs. TAIR 10
Match: AT5G08580.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 244.6 bits (623), Expect = 5.5e-65 Identity = 117/154 (75.97%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Carg17770 vs. TAIR 10
Match: AT4G27790.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 109.0 bits (271), Expect = 3.6e-24 Identity = 57/152 (37.50%), Postives = 90/152 (59.21%), Query Frame = 0
BLAST of Carg17770 vs. TAIR 10
Match: AT2G41100.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 48.1 bits (113), Expect = 7.6e-06 Identity = 33/117 (28.21%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of Carg17770 vs. TAIR 10
Match: AT2G41100.2 (Calcium-binding EF hand family protein ) HSP 1 Score: 48.1 bits (113), Expect = 7.6e-06 Identity = 33/117 (28.21%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of Carg17770 vs. TAIR 10
Match: AT2G41100.3 (Calcium-binding EF hand family protein ) HSP 1 Score: 48.1 bits (113), Expect = 7.6e-06 Identity = 33/117 (28.21%), Postives = 58/117 (49.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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