Carg17759 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17759
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor LEP-like
Location	Carg_Chr04: 17496597 .. 17497269 (+)
RNA-Seq Expression	Carg17759
Synteny	Carg17759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCATCGCCGTCAAAACCCAAGAGAAAGCAGCAGCAGCCGCCGCCGGAAACGACGCCCCACCGTTTCCTCGGAGTCCGACGGCGGCCATGGGGCCGATACGCCGCCGAGATCAGGGACCCTTCCACCAAAGAGCGTCACTGGCTCGGAACCTTCGACACCGCCGAGGAGGCCGCAGTCGCTTACGACTGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCTCGTACCAACTTCCTCTACTCCGATTCTCTCCCTCCTCCGCCGCCGCCTCCCTCCGCCGCCCTCCCTCCCAATCAAGCTCCTCTGCTTCTGCCTACTCCACCGCCTCATTTCCACCAAATCCCCCCTTCCAGAGACTCGCCGCCAAGCCTCTTCTCCGTCGACGGAGACGGCGGCGCTGAACTCCCGCCGTTTCCTCCCGCGATTTCGTCGGAATCAGAGAATTACAATTAATTACAATTACAATTATAATCAGGGTTTAATGGAATTGCAGAACTCTGGATTTGAATATTTCAATCAGTCTCCGACTGAAATCGGATCGTGTTTCGGATTCGATTCGAGCAGCGAGTACGTGCATGGCCCGATCTTCAGCTCAATGCCGGCGGTTTCCGACGCCGGCGCCGGCGAGTTTCCGTCTCCGGCGGCTAATTTCTATTTCCCTCAGTCTTGA

mRNA sequence

ATGAGTCCATCGCCGTCAAAACCCAAGAGAAAGCAGCAGCAGCCGCCGCCGGAAACGACGCCCCACCGTTTCCTCGGAGTCCGACGGCGGCCATGGGGCCGATACGCCGCCGAGATCAGGGACCCTTCCACCAAAGAGCGTCACTGGCTCGGAACCTTCGACACCGCCGAGGAGGCCGCAGTCGCTTACGACTGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCTCGTACCAACTTCCTCTACTCCGATTCTCTCCCTCCTCCGCCGCCGCCTCCCTCCGCCGCCCTCCCTCCCAATCAAGCTCCTCTGCTTCTGCCTACTCCACCGCCTCATTTCCACCAAATCCCCCCTTCCAGAGACTCGCCGCCAAGCCTCTTCTCCGTCGACGGAGACGGCGGCGCTGAACTCCCGCCGTTTCCTCCCGCGATTTCCGAGTACGTGCATGGCCCGATCTTCAGCTCAATGCCGGCGGTTTCCGACGCCGGCGCCGGCGAGTTTCCGTCTCCGGCGGCTAATTTCTATTTCCCTCAGTCTTGA

Coding sequence (CDS)

ATGAGTCCATCGCCGTCAAAACCCAAGAGAAAGCAGCAGCAGCCGCCGCCGGAAACGACGCCCCACCGTTTCCTCGGAGTCCGACGGCGGCCATGGGGCCGATACGCCGCCGAGATCAGGGACCCTTCCACCAAAGAGCGTCACTGGCTCGGAACCTTCGACACCGCCGAGGAGGCCGCAGTCGCTTACGACTGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCTCGTACCAACTTCCTCTACTCCGATTCTCTCCCTCCTCCGCCGCCGCCTCCCTCCGCCGCCCTCCCTCCCAATCAAGCTCCTCTGCTTCTGCCTACTCCACCGCCTCATTTCCACCAAATCCCCCCTTCCAGAGACTCGCCGCCAAGCCTCTTCTCCGTCGACGGAGACGGCGGCGCTGAACTCCCGCCGTTTCCTCCCGCGATTTCCGAGTACGTGCATGGCCCGATCTTCAGCTCAATGCCGGCGGTTTCCGACGCCGGCGCCGGCGAGTTTCCGTCTCCGGCGGCTAATTTCTATTTCCCTCAGTCTTGA

Protein sequence

MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS

Homology

[Close]

BLAST of Carg17759 vs. NCBI nr
Match: KAG7032663.1 (Ethylene-responsive transcription factor LEP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.4 bits (921), Expect = 1.8e-95
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS 179
           SPPSLFSVDGDGGAELPPFPPAISEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS 178

[Close]

BLAST of Carg17759 vs. NCBI nr
Match: XP_022963669.1 (ethylene-responsive transcription factor LEP-like [Cucurbita moschata] >KAG6601967.1 Ethylene-responsive transcription factor LEP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 178/226 (78.76%), Postives = 178/226 (78.76%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAI------------------------------------- 179
           SPPSLFSVDGDGGAELPPFPPAI                                     
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNYNYNQGLMELQNSGFEYFNQSPT 180

[Close]

BLAST of Carg17759 vs. NCBI nr
Match: XP_022990620.1 (ethylene-responsive transcription factor LEP-like [Cucurbita maxima])

HSP 1 Score: 334.0 bits (855), Expect = 8.2e-88
Identity = 176/222 (79.28%), Postives = 177/222 (79.73%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETT HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTSHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAI------------------------------------- 179
           SPPSLFSVDGDGGAELPPFPPAI                                     
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSSTEIGS 180

[Close]

BLAST of Carg17759 vs. NCBI nr
Match: XP_023541749.1 (ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87
Identity = 176/222 (79.28%), Postives = 176/222 (79.28%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAI------------------------------------- 179
           SPPSLFSVDGDGGAELPPFPPAI                                     
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGS 180

[Close]

BLAST of Carg17759 vs. NCBI nr
Match: KAA0066104.1 (ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK15143.1 ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa])

HSP 1 Score: 236.1 bits (601), Expect = 2.3e-58
Identity = 137/225 (60.89%), Postives = 148/225 (65.78%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPP-ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK   PPP E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLL----PTPPPHFHQI 120
           A+AYD AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL L    P PPP FHQ 
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120

Query: 121 PPSRDSPPSLFSVDGDG-GAELPPFPPAIS------------------------------ 179
           PP+ DSP  +   D DG  AELPPFPPAIS                              
Sbjct: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 180

[Close]

BLAST of Carg17759 vs. ExPASy Swiss-Prot
Match: Q9M644 (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-31
Identity = 93/205 (45.37%), Postives = 109/205 (53.17%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           M+ + SK K+KQ     +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAA
Sbjct: 1   MNTTSSKSKKKQD----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLP------------PPPPPPSAALPPNQAPLLL--- 120
           +AYD AARS+RG+ ARTNF+YSD  P            PPPPPP  A P N     +   
Sbjct: 61  LAYDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMF 120

Query: 121 --------PTPPPHFHQIPP---SRDSPPSLFSVDGDGGAELPPFPPAI----------- 162
                   P   PH  Q+           + +    D   ELPP P  +           
Sbjct: 121 NQYSSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQPQWT 180

[Close]

BLAST of Carg17759 vs. ExPASy Swiss-Prot
Match: Q9FZ90 (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 GN=ERF087 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.0e-25
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 2  SPSPSKPKRKQQQPPPETTPH----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 61
          S S    ++KQQQP P+   H    +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAE
Sbjct: 13 SRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAE 72

Query: 62 EAAVAYDCAARSLRGSLARTNFLYSD 84
          EAA+AYD AARS+RG  ARTNF+YSD
Sbjct: 73 EAALAYDRAARSIRGLTARTNFVYSD 98

[Close]

BLAST of Carg17759 vs. ExPASy Swiss-Prot
Match: Q9FYK5 (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana OX=3702 GN=ESR2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-22
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 23  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLARTNFLY 82
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYDCAAR++RG  ARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

[Close]

BLAST of Carg17759 vs. ExPASy Swiss-Prot
Match: Q3E703 (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 GN=ERF088 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.7e-22
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 1  MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
          M  S +K K K+++   E    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA
Sbjct: 1  MLKSSNKRKSKEEKKLQE---GKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAA 60

Query: 61 VAYDCAARSLRGSLARTNFLYSDS 85
           AYD AARS+ GSLA TNF Y+++
Sbjct: 61 FAYDVAARSISGSLATTNFFYTEN 81

[Close]

BLAST of Carg17759 vs. ExPASy Swiss-Prot
Match: Q8H3Q1 (Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=39947 GN=FZP PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.7e-22
Identity = 61/105 (58.10%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 5   PSKPKRKQQQPPPE-------TTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 64
           PS P     + PP          P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA+
Sbjct: 32  PSPPSSPMSERPPSGRSRRRAQEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQ 91

Query: 65  EAAVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAP 103
           EAA+AYD AA S++G+ ARTNF+Y+ +    PP     L P  AP
Sbjct: 92  EAALAYDRAALSMKGAQARTNFVYTHAAYNYPP----FLAPFHAP 132

[Close]

BLAST of Carg17759 vs. ExPASy TrEMBL
Match: A0A6J1HKV8 (ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 GN=LOC111463929 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.1e-89
Identity = 178/226 (78.76%), Postives = 178/226 (78.76%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAI------------------------------------- 179
           SPPSLFSVDGDGGAELPPFPPAI                                     
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNYNYNQGLMELQNSGFEYFNQSPT 180

[Close]

BLAST of Carg17759 vs. ExPASy TrEMBL
Match: A0A6J1JQK9 (ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN=LOC111487448 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.0e-88
Identity = 176/222 (79.28%), Postives = 177/222 (79.73%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETT HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTSHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAI------------------------------------- 179
           SPPSLFSVDGDGGAELPPFPPAI                                     
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSSTEIGS 180

[Close]

BLAST of Carg17759 vs. ExPASy TrEMBL
Match: A0A5A7VFL7 (Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00060 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.1e-58
Identity = 137/225 (60.89%), Postives = 148/225 (65.78%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPP-ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK   PPP E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLL----PTPPPHFHQI 120
           A+AYD AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL L    P PPP FHQ 
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120

Query: 121 PPSRDSPPSLFSVDGDG-GAELPPFPPAIS------------------------------ 179
           PP+ DSP  +   D DG  AELPPFPPAIS                              
Sbjct: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 180

[Close]

BLAST of Carg17759 vs. ExPASy TrEMBL
Match: A0A6J1CKI8 (ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=LOC111011985 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.9e-54
Identity = 135/224 (60.27%), Postives = 140/224 (62.50%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQ  PPPET  HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQPPPPPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPP---------PPSAALPPNQAPLLLPTPPPH 120
           +AYD AARSLRGSLARTNFLYSDS PP PP         PP    PP   PLL P  PP 
Sbjct: 61  LAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPDSPPL 120

Query: 121 FHQIPPSRDSPPSLFSVDGDGGAELPPFPPAIS--------------------------- 176
           F Q P + DS  S F+   DGGAELPPFPPAIS                           
Sbjct: 121 FDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYNNCLMETQNIGLESLDQSS 180

[Close]

BLAST of Carg17759 vs. ExPASy TrEMBL
Match: A0A1S3AU89 (ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC103483013 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.1e-53
Identity = 127/220 (57.73%), Postives = 138/220 (62.73%), Query Frame = 0


Query: 5   PSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYD 64
           P  PK      P E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA+AYD
Sbjct: 5   PQNPKESTTPAPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYD 64

Query: 65  CAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLL----PTPPPHFHQIPPSRD 124
            AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL L    P PPP FHQ PP+ D
Sbjct: 65  RAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAGD 124

Query: 125 SPPSLFSVDGDG-GAELPPFPPAIS----------------------------------- 179
           SP  +   D DG  AELPPFPPAIS                                   
Sbjct: 125 SPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCL 184

[Close]

BLAST of Carg17759 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-32
Identity = 93/205 (45.37%), Postives = 109/205 (53.17%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           M+ + SK K+KQ     +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAA
Sbjct: 1   MNTTSSKSKKKQD----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLP------------PPPPPPSAALPPNQAPLLL--- 120
           +AYD AARS+RG+ ARTNF+YSD  P            PPPPPP  A P N     +   
Sbjct: 61  LAYDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMF 120

Query: 121 --------PTPPPHFHQIPP---SRDSPPSLFSVDGDGGAELPPFPPAI----------- 162
                   P   PH  Q+           + +    D   ELPP P  +           
Sbjct: 121 NQYSSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQPQWT 180

[Close]

BLAST of Carg17759 vs. TAIR 10
Match: AT1G28160.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.3e-26
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 2  SPSPSKPKRKQQQPPPETTPH----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 61
          S S    ++KQQQP P+   H    +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAE
Sbjct: 13 SRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAE 72

Query: 62 EAAVAYDCAARSLRGSLARTNFLYSD 84
          EAA+AYD AARS+RG  ARTNF+YSD
Sbjct: 73 EAALAYDRAARSIRGLTARTNFVYSD 98

[Close]

BLAST of Carg17759 vs. TAIR 10
Match: AT1G24590.1 (DORNROSCHEN-like )

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-23
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 23  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLARTNFLY 82
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYDCAAR++RG  ARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

[Close]

BLAST of Carg17759 vs. TAIR 10
Match: AT1G12890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-23
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 1  MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
          M  S +K K K+++   E    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA
Sbjct: 1  MLKSSNKRKSKEEKKLQE---GKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAA 60

Query: 61 VAYDCAARSLRGSLARTNFLYSDS 85
           AYD AARS+ GSLA TNF Y+++
Sbjct: 61 FAYDVAARSISGSLATTNFFYTEN 81

[Close]

BLAST of Carg17759 vs. TAIR 10
Match: AT5G18560.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 59/100 (59.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 18  ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLART 77
           +  P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAA+AYD AA S+RG+ ART
Sbjct: 49  QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQART 108

Query: 78  NFLYSDS-----LPPPPPPPSAALPPNQAPLLLPTPPPHF 113
           NF+Y+ +     L  P        P N     LP   P F
Sbjct: 109 NFVYTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSPQF 148

The following BLAST results are available for this feature:

BLAST of Carg17759 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032663.1	1.8e-95	100.00	Ethylene-responsive transcription factor LEP, partial [Cucurbita argyrosperma su...	[more]
XP_022963669.1	1.3e-88	78.76	ethylene-responsive transcription factor LEP-like [Cucurbita moschata] >KAG66019...	[more]
XP_022990620.1	8.2e-88	79.28	ethylene-responsive transcription factor LEP-like [Cucurbita maxima]	[more]
XP_023541749.1	1.8e-87	79.28	ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]	[more]
KAA0066104.1	2.3e-58	60.89	ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK1514...	[more]

BLAST of Carg17759 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M644	4.3e-31	45.37	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FZ90	6.0e-25	67.44	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FYK5	2.8e-22	81.36	Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E703	4.7e-22	65.48	Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H3Q1	4.7e-22	58.10	Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Carg17759 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKV8	6.1e-89	78.76	ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JQK9	4.0e-88	79.28	ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A5A7VFL7	1.1e-58	60.89	Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1CKI8	4.9e-54	60.27	ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S3AU89	1.1e-53	57.73	ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of Carg17759 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13910.1	3.0e-32	45.37	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	4.3e-26	67.44	Integrase-type DNA-binding superfamily protein	[more]
AT1G24590.1	2.0e-23	81.36	DORNROSCHEN-like	[more]
AT1G12890.1	3.4e-23	65.48	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	2.2e-22	59.00	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 53.33 coord: 46..62 score: 68.66
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 4.7E-32 score: 122.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 26..72 e-value: 7.3E-12 score: 45.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 20.507723
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..79 e-value: 3.37859E-29 score: 100.424
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..81 e-value: 3.5E-24 score: 86.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR31677:SF118	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 8..83
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 8..83
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 24..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17759-RA	Carg17759-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009739	response to gibberellin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity