Carg17550 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17550
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlycoprotein membrane precursor GPI-anchored
LocationCarg_Chr12: 10321601 .. 10322110 (-)
RNA-Seq ExpressionCarg17550
SyntenyCarg17550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACTGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGATCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA

mRNA sequence

GAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACTGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGATCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA

Coding sequence (CDS)

GAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACTGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGATCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA

Protein sequence

EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Homology
BLAST of Carg17550 vs. NCBI nr
Match: KAG7021112.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS
Sbjct: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Sbjct: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 169

BLAST of Carg17550 vs. NCBI nr
Match: XP_022938132.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata])

HSP 1 Score: 335.1 bits (858), Expect = 3.5e-88
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS
Sbjct: 33  EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 92

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 93  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 152

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Sbjct: 153 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 201

BLAST of Carg17550 vs. NCBI nr
Match: KAG6586269.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.1 bits (858), Expect = 3.5e-88
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS
Sbjct: 32  EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 91

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 92  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 151

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Sbjct: 152 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 200

BLAST of Carg17550 vs. NCBI nr
Match: XP_023536945.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.1 bits (858), Expect = 3.5e-88
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS
Sbjct: 34  EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 93

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 94  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 153

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Sbjct: 154 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 202

BLAST of Carg17550 vs. NCBI nr
Match: XP_022965946.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 8.0e-85
Identity = 163/169 (96.45%), Postives = 166/169 (98.22%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKA CIA+KIA+VDKDHPCNITTANSTVTARHLS
Sbjct: 32  EEDKENLLQGLNGYRQAQKLPPFEKNAKACCIADKIADVDKDHPCNITTANSTVTARHLS 91

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI NFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 92  QIANFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 151

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGA VLVVLLGLFLVGNL
Sbjct: 152 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGASVLVVLLGLFLVGNL 200

BLAST of Carg17550 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.7e-24
Identity = 54/140 (38.57%), Postives = 86/140 (61.43%), Query Frame = 0

Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR  Q L    KN  A C+A++IA+  K+ PC   T ++TV      Q
Sbjct: 27  DEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTNDTGSATVPGTE-PQ 86

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N+     KC ++++ T D  +MP CVP +   ++L N+T++QY+  LN+SKF G G+G
Sbjct: 87  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 146

Query: 122 VDVDWMVVILTTADHGGSFA 142
            + DW+VV+LTT    GS++
Sbjct: 147 KEDDWIVVVLTTNTPEGSYS 165

BLAST of Carg17550 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.5e-21
Identity = 55/169 (32.54%), Postives = 98/169 (57.99%), Query Frame = 0

Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR +  L     N  A C+A++IA+  K+ PC  TT +++V       
Sbjct: 28  DEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNTTGSASVPGT-TPG 87

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N  +   KC+++   T D  ++P CVP++   ++L N+T +QY++ LN+SKF G G+G
Sbjct: 88  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 147

Query: 122 VDVDWMVVILTTADHGGSF-----AGSGAGSVVASMGAPVLVVLLGLFL 166
            D +W+VV+LTT+   GS+     +G+ A  V   + + ++ +L   F+
Sbjct: 148 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCFFM 195

BLAST of Carg17550 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-18
Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 0

Query: 3   DKENLL-QGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 62
           D ENLL    N YR++  L   +KN  A C+A+++ +  ++ PC  TT +++V       
Sbjct: 28  DGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTTGSASVPGTD-PG 87

Query: 63  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 122
           I NF +   KC+++ N T D +++ VC P       L+++      + LN+SKF GAG+G
Sbjct: 88  IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANV-LTKNLNDSKFTGAGVG 147

Query: 123 VDVD--WMVVILTTADHGGSFAGSGA 146
           +D D  W+V +LTT   GGS++ SGA
Sbjct: 148 IDSDGIWLVTVLTTNTPGGSYSNSGA 171

BLAST of Carg17550 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-09
Identity = 49/161 (30.43%), Postives = 72/161 (44.72%), Query Frame = 0

Query: 7   LLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFE 66
           LL   N YR    L    KN  A C+A+++ +  K+ PC  T  ++ V   +L       
Sbjct: 33  LLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPCTNTNNSAPVPGNNL------- 92

Query: 67  HYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDW 126
               KC ++     D ++M VC P   +   L+N+      + LN+SK  G G+G    W
Sbjct: 93  --LAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNFNSV-VLKNLNDSKITGIGIGSGDIW 152

Query: 127 MVVILTT-ADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLV 167
           +VVILTT    GG    +   S   + G   LV    LFL+
Sbjct: 153 VVVILTTNTPEGGYSLLTTTNSGAYAFGVNGLVSSSFLFLL 183

BLAST of Carg17550 vs. ExPASy TrEMBL
Match: A0A6J1FD58 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita moschata OX=3662 GN=LOC111444309 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS
Sbjct: 33  EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 92

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 93  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 152

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Sbjct: 153 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 201

BLAST of Carg17550 vs. ExPASy TrEMBL
Match: A0A6J1HN14 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111465672 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.9e-85
Identity = 163/169 (96.45%), Postives = 166/169 (98.22%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           EEDKENLLQGLNGYRQAQKLPPFEKNAKA CIA+KIA+VDKDHPCNITTANSTVTARHLS
Sbjct: 32  EEDKENLLQGLNGYRQAQKLPPFEKNAKACCIADKIADVDKDHPCNITTANSTVTARHLS 91

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI NFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL
Sbjct: 92  QIANFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 151

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           GVDVDWMVVILTTA+HGGSFAGSGAGSVVASMGA VLVVLLGLFLVGNL
Sbjct: 152 GVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGASVLVVLLGLFLVGNL 200

BLAST of Carg17550 vs. ExPASy TrEMBL
Match: A0A6J1KEG4 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111493609 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           +++++NLLQGLN YRQAQ LPP  KNAKA CIA++IA+ +KD PC +TTA S V     S
Sbjct: 27  KDEEDNLLQGLNSYRQAQNLPPLAKNAKADCIADEIADDNKDQPCAVTTAKSNVVPSRPS 86

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI  F  YAEKCKVD+NTT DAIVMPVCVP +V+ +LLANYT +QYA+YLN+S+FVGAG+
Sbjct: 87  QITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGV 146

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFL 166
           G + DWMVV+LTT   GGSF GSG GS+VAS+   V + LLGL +
Sbjct: 147 GSEDDWMVVVLTTGASGGSFEGSGTGSLVASVWGCVALALLGLMI 191

BLAST of Carg17550 vs. ExPASy TrEMBL
Match: A0A6J1G4I7 (uncharacterized GPI-anchored protein At3g06035 OS=Cucurbita moschata OX=3662 GN=LOC111450734 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.1e-50
Identity = 105/168 (62.50%), Postives = 131/168 (77.98%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           +++++NLLQGLN YRQAQ LPP  KNAKA CIAE+IA+ +KD PC +TTA S V     S
Sbjct: 27  KDEEDNLLQGLNSYRQAQNLPPLAKNAKADCIAEEIADDNKDQPCAVTTAKSNVVPSRPS 86

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           QI  F  YAEKCKVD+NTT DAIVMPVCVP +V+ +LLANYT +QYA+YLN+S+FVGAG+
Sbjct: 87  QITKFMDYAEKCKVDINTTTDAIVMPVCVPKLVQTLLLANYTHSQYAKYLNDSRFVGAGV 146

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGN 169
           G + DWMVV+LTT   GGSF GSG  S++AS+   V + LLGL ++GN
Sbjct: 147 GSEDDWMVVVLTTGASGGSFEGSGTESLMASVWGCVALALLGL-MIGN 193

BLAST of Carg17550 vs. ExPASy TrEMBL
Match: A0A6J1DAZ7 (uncharacterized GPI-anchored protein At3g06035 OS=Momordica charantia OX=3673 GN=LOC111018803 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.3e-50
Identity = 103/165 (62.42%), Postives = 131/165 (79.39%), Query Frame = 0

Query: 1   EEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLS 60
           +++++NLLQGLN YRQAQ LPP  KNAKA CIA +IA+  KD PC++TTA S V A   S
Sbjct: 33  KDEEDNLLQGLNSYRQAQNLPPLTKNAKADCIANEIADDAKDQPCSVTTAKSNVVASRPS 92

Query: 61  QIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGL 120
           Q+  F+ YAEKCKVD+N+TADA+ MPVCVP +V+ +LLANYT +QYA+YLN+S+FVGAGL
Sbjct: 93  QLTKFQDYAEKCKVDVNSTADAVAMPVCVPKLVQTLLLANYTHSQYARYLNDSRFVGAGL 152

Query: 121 GVDVDWMVVILTTADHGGSFAGSGAGSVVASMGAPVLVVLLGLFL 166
           G + DWMVV+LTT   GGSFAGSGA S+  S+G   ++VLLGL +
Sbjct: 153 GKEDDWMVVVLTTGGPGGSFAGSGAVSIGGSVG--TMMVLLGLLI 195

BLAST of Carg17550 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 155.2 bits (391), Expect = 4.6e-38
Identity = 81/168 (48.21%), Postives = 116/168 (69.05%), Query Frame = 0

Query: 4   KENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHL-SQI 63
           ++NLLQGLN YR AQ++PPF KN KA C+A++IA+  +D PC   T  STVT   +  ++
Sbjct: 32  EDNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLEDQPCTNHTTASTVTPGSVPPRL 91

Query: 64  ENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGV 123
            N++    +CK+D NTT D +++PVC+P+ +  + L NYTQT YA+YLN+S++VGAG+G 
Sbjct: 92  TNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTNYTQTGYARYLNDSRYVGAGVGS 151

Query: 124 DVDWMVVILTTADHGGSF-AGSGAGSVVASMGAPVLVVLLGLFLVGNL 170
           + +WMVV+LTT+  GGSF AG  AG       A  + V+ GL L+G L
Sbjct: 152 EKEWMVVVLTTSTPGGSFTAGVAAGK------ATSVRVMAGLGLMGLL 193

BLAST of Carg17550 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25
Identity = 54/140 (38.57%), Postives = 86/140 (61.43%), Query Frame = 0

Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR  Q L    KN  A C+A++IA+  K+ PC   T ++TV      Q
Sbjct: 27  DEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTNDTGSATVPGTE-PQ 86

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N+     KC ++++ T D  +MP CVP +   ++L N+T++QY+  LN+SKF G G+G
Sbjct: 87  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 146

Query: 122 VDVDWMVVILTTADHGGSFA 142
            + DW+VV+LTT    GS++
Sbjct: 147 KEDDWIVVVLTTNTPEGSYS 165

BLAST of Carg17550 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 101.7 bits (252), Expect = 6.0e-22
Identity = 55/169 (32.54%), Postives = 98/169 (57.99%), Query Frame = 0

Query: 2   EDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 61
           ++++ LL G+N YR +  L     N  A C+A++IA+  K+ PC  TT +++V       
Sbjct: 28  DEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNTTGSASVPGT-TPG 87

Query: 62  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 121
             N  +   KC+++   T D  ++P CVP++   ++L N+T +QY++ LN+SKF G G+G
Sbjct: 88  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 147

Query: 122 VDVDWMVVILTTADHGGSF-----AGSGAGSVVASMGAPVLVVLLGLFL 166
            D +W+VV+LTT+   GS+     +G+ A  V   + + ++ +L   F+
Sbjct: 148 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLLFCFFM 195

BLAST of Carg17550 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-19
Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 0

Query: 3   DKENLL-QGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQ 62
           D ENLL    N YR++  L   +KN  A C+A+++ +  ++ PC  TT +++V       
Sbjct: 28  DGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTNTTGSASVPGTD-PG 87

Query: 63  IENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLG 122
           I NF +   KC+++ N T D +++ VC P       L+++      + LN+SKF GAG+G
Sbjct: 88  IPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANV-LTKNLNDSKFTGAGVG 147

Query: 123 VDVD--WMVVILTTADHGGSFAGSGA 146
           +D D  W+V +LTT   GGS++ SGA
Sbjct: 148 IDSDGIWLVTVLTTNTPGGSYSNSGA 171

BLAST of Carg17550 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-10
Identity = 49/161 (30.43%), Postives = 72/161 (44.72%), Query Frame = 0

Query: 7   LLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFE 66
           LL   N YR    L    KN  A C+A+++ +  K+ PC  T  ++ V   +L       
Sbjct: 33  LLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQPCTNTNNSAPVPGNNL------- 92

Query: 67  HYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDW 126
               KC ++     D ++M VC P   +   L+N+      + LN+SK  G G+G    W
Sbjct: 93  --LAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNFNSV-VLKNLNDSKITGIGIGSGDIW 152

Query: 127 MVVILTT-ADHGGSFAGSGAGSVVASMGAPVLVVLLGLFLV 167
           +VVILTT    GG    +   S   + G   LV    LFL+
Sbjct: 153 VVVILTTNTPEGGYSLLTTTNSGAYAFGVNGLVSSSFLFLL 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7021112.11.2e-88100.00putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. argyrosper... [more]
XP_022938132.13.5e-8899.41uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata][more]
KAG6586269.13.5e-8899.41putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023536945.13.5e-8899.41uncharacterized GPI-anchored protein At3g06035-like [Cucurbita pepo subsp. pepo][more]
XP_022965946.18.0e-8596.45uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q84MC03.7e-2438.57Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G... [more]
P598338.5e-2132.54Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G... [more]
Q84VZ53.0e-1836.30Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 G... [more]
Q8GUL85.7e-0930.43Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 G... [more]
Match NameE-valueIdentityDescription
A0A6J1FD581.7e-8899.41uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita moschata OX=366... [more]
A0A6J1HN143.9e-8596.45uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1KEG41.1e-5063.03uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1G4I73.1e-5062.50uncharacterized GPI-anchored protein At3g06035 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1DAZ75.3e-5062.42uncharacterized GPI-anchored protein At3g06035 OS=Momordica charantia OX=3673 GN... [more]
Match NameE-valueIdentityDescription
AT1G54860.14.6e-3848.21Glycoprotein membrane precursor GPI-anchored [more]
AT3G06035.12.6e-2538.57Glycoprotein membrane precursor GPI-anchored [more]
AT5G19250.16.0e-2232.54Glycoprotein membrane precursor GPI-anchored [more]
AT5G19240.12.1e-1936.30Glycoprotein membrane precursor GPI-anchored [more]
AT5G19230.14.1e-1030.43Glycoprotein membrane precursor GPI-anchored [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33976:SF11SUBFAMILY NOT NAMEDcoord: 2..166
NoneNo IPR availablePANTHERPTHR33976OS07G0645000 PROTEINcoord: 2..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17550-RACarg17550-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane