Carg17532 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTGTTGTATTTAGTTGAATCACTCTTCAATCCTCAATCGATATCAGTTTTCTTGTTCTTTTTTATGTTTTTATGTGTTATTGTTTATTGATGAATCTGATTTTTGCAGAGAAAGGTTTCGAGCTCACGCAACACGCTCGGACGGATCGCTGCAATTGCTGCTGCTGGTTCTTGTTTCTGGTACGCCGGAAGCAAATTAGATTCTGGTGAGTTTTTGAGCTCTTTTAATGGCTTTCAAGATATTGATGAATGAAAATGAATACTCAGGAGAGTTTACTTTGCTGTATGTCTGATGAATCGAAAACGTAGATGAATGTAAATTCTGTACTGGTCAATATCTTGAGAATGTACTATTCATTGATCTTTTGTATGTTTCTTCATTGAAGGATCCTCTGTAGTGTTGTCAATTCCTGCTGCTCTGAGTGAGCCACTGTTTCTTCCATGGCAGACCGCACACGGCTTCACGATTCATCCTTCCGGTGCATTTGATCACCAGAAATTGGGTCTGTCTGTTTGTTTAGTTACTTTCTTGATTGTAGGCAAGTTTTTTTTTTTACATAGATTCTGTTTCAACTGGAGGTCTTGTGTGAAATTGTAGGTCTTTCATTTTGTTCTTCAAGAGTCAGTCCTGCTCCACCATCTGGTGTGGAGAAGGAAAAGCCTGGAGATACGCAGAAGCCTTGTCCAAGATGTTTGGATAGAGATACAATTGCAAATGCTGCAGCAGACGTCGGCCCTGCTGTTGTAAATATTTCTGTTTCACATGGTATTGGCAAATATTTGTTATTTTTATTGTGATTTCTGTGAAAAAAAAGTTGGTAAGGGATTGTTTTCTTAGGTATTTACGGAATTGCTACTGCTAAAAGCATGGGATCCGGAACAATTATTGACAAGGATGGTACTATTTTAACATGTGCACATGTCGTGACGGATTTTCATGGTCCACGAGCTGCATCCAAAGGAAAGGCAAGTAGATATGTCAGCCTGTTTGTTTGCTTTCCTCCTGAGCACAACAAGAATATGTTTAGCTATCCTTTTGTTTTATTGTGATGTGTTGAAATGCTGATCTTGATAATTATATCAATTTTCTCCCCTGGTTAATACTATGTTCGTTTTATCACAATAATACAAACAATAACGAATGCGTGGAATGGTACAGGTAGAGGTTACTCTACAAGATGGTCGGACATTTGAAGGGACAGTAATGAATGCTGATTTTCACTCTGATATTGCCATTGTGAAAATCAATTCTAAAAGCCCTCTTCCCATGGCAAAACTTGGTTCTTCAAGCAAGCTCCGACCAGGGGATTGGGTTGTAGCAATTGGGTGTCCACTTTCGCTTCAGAATACTGTCACAGCTGGTATAGTAAGGTGGTCAATTATAGGAAGTTTCTCTGTCCTTGATGTTTCCATGGAAGAGATAGGAACATATAATTCCTTCATATTTTTGATGCTGAAGACATGAATGATACAAAGTCTTTTCCTCAATTACGTACTTTAAGTGTTATCTATAGTTGTTGACTAAGAGGCACGAATACAGACATGAGACATGGTTATGATATGATATAGACACGGTGCCATGTCATATTTTTAAAAATCTAGGACTTGAAACAACAAGTATTAAACAATATTTTTTCTAAAAATGTCATTTTTATATAAGATTTGTTTTTTTTTTTTTTTTTTTCTGAAGTCAATATGTTTATGCATTTATTTGCTTAAAAAATGAGGTTGATGTATTTCACATGTCATGCATTACTATTTTCGCCTATTTAGTATGCTCGAACAAGTGTCCTATACGTGCCTAATAGATGTTTGGTCCTTATTCACTTTATACCACAAGTGTTTAACACATGCGTTTGTACTACCAAACATGCAATACATGTTTAAGAAGTGTCCTTGCTTAGCATTAACTATATATTTGATCGTCTACTTTTTGTCTTTGATTCGATTCAGTTGTGTTGACCGTAAGAGTAGTGATTTGGGTCTTGGTGGAATGCGAAGGGAATATCTACAAACAGATTGTGCAATTAACGTGGTATGTATCTCATTTTTTACCCATCTCCCTTTGCAATATCGAACGTGCTTCATTGTTGTTAAAATAAATACGAAACACTGGCATTCTGTAATCAGTATTTCTCATGTAGGGAAACTCTGGGGGTCCTCTTGTTAATGTGGATGGAGAAGTTATTGGTGTAAATATTATGAAAGTGGATGATGCTGTTGGATTAAGTTTCGCTGTACCAATTGATTCAGTCTCCAAAATTACAGAGCAATTCAAGAAAAGAGGGTATTGTAACACATTTAGAGACTAATATTGCTTTACTAGTGAATTGAATTGAATATACGCCATTTGGGTTTGTAACAACCCATGGCCACCACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAATGCGTCTGCTAGGGGAAGGTTTCCACACTTTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACCCCCCTTCGGGGCCCAGCGTCCTCGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGATTGCCCCCAAATCTACCCCCTTTGAGGCCCAGCGTCCTTACTGGCACACCGCTTCGTGTCTACCCCCCTTCGGGGAACAGCGAAAAGGCTGACACATCATCCGGTGTCTGGCTCTGATACCATTTGTAACGACCCAGGCCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTTCTCTTTCAGGCTTCCTCTCAAGGCTTTAAAACGCGTCTGCTTAGGGAAGGTTCCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCTCAACCAACGTGTGACATCACACCATTCATGTGTAAAATAGATTTATTTCACCACTGTTTTTATTTTGCATTCAAGGATCGAATGAAATGGCTTTATTTTTATTTTCCAATGATGATTATAATATAAAGTGTGATGATACAGGAGAGTTATTCGGCCTTGGCTTGGATTGAAAATGATCGATCTCAACGAAATGATAATCGAACAACTTAAAGAAAGAGATGCATCTTTTCCAGACGTTACTAAAGGGGTTCTTGTAGCCATGGTAATAATGATACCTTTTTTGCATTACATTCTTCCTTTTCTATCTTTTTCTTCTTATTTTATGTATTAAATTTGGCATGAGTGAATAGAATTTAGCAAATACTTCAATAGGTAACTCCTGGATCCCCTGCTGGTCGTGCTGGGTTCCGTCCTGGTGATGTCGTCATCGAGTTCGATAAGCAACCTGTTGGCAGTATCCAAGAGGTATTTGGATCTACTTTTAGTTCTTAATTCTTACCAACGGTATTGCCAGCATACTGTTATCTTGTGAATTCTTTGGATAGAAAAGTTCATTCTTGCTTGAATCCTAATGTTTGTAAATAAAAACCACTTCTAGAGTTCTTAGAATTGTACTCTTAAATTTGAGCAAATACCTCAAAATTATGCGCTTAGATTCATTGGATTGCAACTATTTCGAATATTCGAGGGAAACGAACAATTATGATAAACTCCCAAACTTGGTAATTTTTTTATAAAGTTTTTGTGAAATTTCTGTTTTCTGGAGTTCGAGTAACCTTCTCTACTGTTGCGAGACCAGGGATCGTTTTTCCCCCTCAACAGGAGTCCACTCCTGTTGAGGTGGGGAAGTAGGAGGGCACGGGGAGAGTTTTCTCTGTCGTCTAAATAAGGATGGGGCGGGAAATGTTGTTGTTGTCGTCGTTGTCGTTGTCGTCGTCATTAGGCAAGGATTATGTATCTGACCGTTCGAGTTTTTGGCAGATCATTGAAATTATGGGAGATAGAGTTGGGATTCCATTGAAGGCAGTTGTGAAAAGATCACTTAATAGCATCATCACTCTGACTGTTCTTCCTGAGGAGTCCAATCCAGATATGTGATACTATTACCCTCACTACACAATCAATTCAATTCTTTCATATTTCCCATGATTTGGTTATGGCTTAGGGTTAGAACTCGATACCTTAACCTTCTCGTGTAAAGTTGTATAGAATGTTTAAGTTTAGTTTATGAACTTTTAAGGTTGTCTATTTCGTCGTTGAACTTCAAAGAACTAGACTTGTAATTTGACTAGAAATAGTCGTAGGTATGGACAATGATTGATTTTTAAACTTTTTTTTTTATTA TCTTGTTGTATTTAGTTGAATCACTCTTCAATCCTCAATCGATATCAGTTTTCTTGTTCTTTTTTATGTTTTTATGTGTTATTGTTTATTGATGAATCTGATTTTTGCAGAGAAAGGTTTCGAGCTCACGCAACACGCTCGGACGGATCGCTGCAATTGCTGCTGCTGGTTCTTGTTTCTGGTACGCCGGAAGCAAATTAGATTCTGGATCCTCTGTAGTGTTGTCAATTCCTGCTGCTCTGAGTGAGCCACTGTTTCTTCCATGGCAGACCGCACACGGCTTCACGATTCATCCTTCCGGTGCATTTGATCACCAGAAATTGGGTCTTTCATTTTGTTCTTCAAGAGTCAGTCCTGCTCCACCATCTGGTGTGGAGAAGGAAAAGCCTGGAGATACGCAGAAGCCTTGTCCAAGATGTTTGGATAGAGATACAATTGCAAATGCTGCAGCAGACGTCGGCCCTGCTGTTGTAAATATTTCTGTTTCACATGGTATTTACGGAATTGCTACTGCTAAAAGCATGGGATCCGGAACAATTATTGACAAGGATGGTACTATTTTAACATGTGCACATGTCGTGACGGATTTTCATGGTCCACGAGCTGCATCCAAAGGAAAGGCAAGTAGATATGTAGAGGTTACTCTACAAGATGGTCGGACATTTGAAGGGACAGTAATGAATGCTGATTTTCACTCTGATATTGCCATTGTGAAAATCAATTCTAAAAGCCCTCTTCCCATGGCAAAACTTGGTTCTTCAAGCAAGCTCCGACCAGGGGATTGGGTTGTAGCAATTGGGTGTCCACTTTCGCTTCAGAATACTGTCACAGCTGTTGTGTTGACCGTAAGAGTAGTGATTTGGGTCTTGGTGGAATGCGAAGGGAATATCTACAAACAGATTGTGCAATTAACGTGGAGAGTTATTCGGCCTTGGCTTGGATTGAAAATGATCGATCTCAACGAAATGATAATCGAACAACTTAAAGAAAGAGATGCATCTTTTCCAGACGTTACTAAAGGGGTTCTTGTAGCCATGGTAACTCCTGGATCCCCTGCTGGTCGTGCTGGGTTCCGTCCTGGTGATGTCGTCATCGAGTTCGATAAGCAACCTGTTGGCAGTATCCAAGAGATCATTGAAATTATGGGAGATAGAGTTGGGATTCCATTGAAGGCAGTTGTGAAAAGATCACTTAATAGCATCATCACTCTGACTGTTCTTCCTGAGGAGTCCAATCCAGATATGTGATACTATTACCCTCACTACACAATCAATTCAATTCTTTCATATTTCCCATGATTTGGTTATGGCTTAGGGTTAGAACTCGATACCTTAACCTTCTCGTGTAAAGTTGTATAGAATGTTTAAGTTTAGTTTATGAACTTTTAAGGTTGTCTATTTCGTCGTTGAACTTCAAAGAACTAGACTTGTAATTTGACTAGAAATAGTCGTAGGTATGGACAATGATTGATTTTTAAACTTTTTTTTTTATTA ATGGGATCCGGAACAATTATTGACAAGGATGGTACTATTTTAACATGTGCACATGTCGTGACGGATTTTCATGGTCCACGAGCTGCATCCAAAGGAAAGGCAAGTAGATATGTAGAGGTTACTCTACAAGATGGTCGGACATTTGAAGGGACAGTAATGAATGCTGATTTTCACTCTGATATTGCCATTGTGAAAATCAATTCTAAAAGCCCTCTTCCCATGGCAAAACTTGGTTCTTCAAGCAAGCTCCGACCAGGGGATTGGGTTGTAGCAATTGGGTGTCCACTTTCGCTTCAGAATACTGTCACAGCTGTTGTGTTGACCGTAAGAGTAGTGATTTGGGTCTTGGTGGAATGCGAAGGGAATATCTACAAACAGATTGTGCAATTAACGTGGAGAGTTATTCGGCCTTGGCTTGGATTGAAAATGATCGATCTCAACGAAATGATAATCGAACAACTTAAAGAAAGAGATGCATCTTTTCCAGACGTTACTAAAGGGGTTCTTGTAGCCATGGTAACTCCTGGATCCCCTGCTGGTCGTGCTGGGTTCCGTCCTGGTGATGTCGTCATCGAGTTCGATAAGCAACCTGTTGGCAGTATCCAAGAGATCATTGAAATTATGGGAGATAGAGTTGGGATTCCATTGAAGGCAGTTGTGAAAAGATCACTTAATAGCATCATCACTCTGACTGTTCTTCCTGAGGAGTCCAATCCAGATATGTGA MGSGTIIDKDGTILTCAHVVTDFHGPRAASKGKASRYVEVTLQDGRTFEGTVMNADFHSDIAIVKINSKSPLPMAKLGSSSKLRPGDWVVAIGCPLSLQNTVTAVVLTVRVVIWVLVECEGNIYKQIVQLTWRVIRPWLGLKMIDLNEMIIEQLKERDASFPDVTKGVLVAMVTPGSPAGRAGFRPGDVVIEFDKQPVGSIQEIIEIMGDRVGIPLKAVVKRSLNSIITLTVLPEESNPDM Homology
BLAST of Carg17532 vs. NCBI nr
Match: KAG7021094.1 (putative protease Do-like 14 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 476.9 bits (1226), Expect = 1.1e-130 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg17532 vs. NCBI nr
Match: KAG6586251.1 (putative protease Do-like 14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379.8 bits (974), Expect = 1.8e-101 Identity = 219/292 (75.00%), Postives = 223/292 (76.37%), Query Frame = 0
BLAST of Carg17532 vs. NCBI nr
Match: XP_023537892.1 (putative protease Do-like 14 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.4 bits (973), Expect = 2.3e-101 Identity = 218/292 (74.66%), Postives = 223/292 (76.37%), Query Frame = 0
BLAST of Carg17532 vs. NCBI nr
Match: XP_023537891.1 (putative protease Do-like 14 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.4 bits (973), Expect = 2.3e-101 Identity = 218/292 (74.66%), Postives = 223/292 (76.37%), Query Frame = 0
BLAST of Carg17532 vs. NCBI nr
Match: XP_022938300.1 (putative protease Do-like 14 isoform X1 [Cucurbita moschata]) HSP 1 Score: 377.9 bits (969), Expect = 6.7e-101 Identity = 217/292 (74.32%), Postives = 222/292 (76.03%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy Swiss-Prot
Match: Q3E6S8 (Putative protease Do-like 14 OS=Arabidopsis thaliana OX=3702 GN=DEGP14 PE=3 SV=2) HSP 1 Score: 264.6 bits (675), Expect = 1.1e-69 Identity = 152/292 (52.05%), Postives = 187/292 (64.04%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy Swiss-Prot
Match: F1N152 (Serine protease HTRA1 OS=Bos taurus OX=9913 GN=HTRA1 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26 Identity = 91/292 (31.16%), Postives = 140/292 (47.95%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy Swiss-Prot
Match: Q92743 (Serine protease HTRA1 OS=Homo sapiens OX=9606 GN=HTRA1 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26 Identity = 91/292 (31.16%), Postives = 140/292 (47.95%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy Swiss-Prot
Match: D3ZKF5 (Serine protease HTR4 OS=Rattus norvegicus OX=10116 GN=Htra4 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.3e-26 Identity = 89/291 (30.58%), Postives = 137/291 (47.08%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy Swiss-Prot
Match: Q9R118 (Serine protease HTRA1 OS=Mus musculus OX=10090 GN=Htra1 PE=1 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 9.6e-26 Identity = 89/292 (30.48%), Postives = 139/292 (47.60%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy TrEMBL
Match: A0A6J1FCS0 (putative protease Do-like 14 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444435 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.2e-101 Identity = 217/292 (74.32%), Postives = 222/292 (76.03%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy TrEMBL
Match: A0A6J1FJD3 (putative protease Do-like 14 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444435 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.2e-101 Identity = 217/292 (74.32%), Postives = 222/292 (76.03%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy TrEMBL
Match: A0A6J1HPX7 (putative protease Do-like 14 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465556 PE=3 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100 Identity = 215/292 (73.63%), Postives = 221/292 (75.68%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy TrEMBL
Match: A0A6J1HL69 (putative protease Do-like 14 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465556 PE=3 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100 Identity = 215/292 (73.63%), Postives = 221/292 (75.68%), Query Frame = 0
BLAST of Carg17532 vs. ExPASy TrEMBL
Match: A0A5D3CTS1 (Putative protease Do-like 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00580 PE=3 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 1.4e-96 Identity = 207/292 (70.89%), Postives = 220/292 (75.34%), Query Frame = 0
BLAST of Carg17532 vs. TAIR 10
Match: AT5G27660.1 (Trypsin family protein with PDZ domain ) HSP 1 Score: 238.8 bits (608), Expect = 4.5e-63 Identity = 138/264 (52.27%), Postives = 167/264 (63.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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