Carg17456 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17456
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionInterleukin-2 receptor subunit beta like
LocationCarg_Chr12: 11027035 .. 11027520 (+)
RNA-Seq ExpressionCarg17456
SyntenyCarg17456
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATTCGAACGAGCATAAAGAAAATGCCTCACCGTCGTCTCTGAAGGCGAAAATCAAATCTTCTCTGTGTTTGTCCTGCTGCCTTCGTAGGCACCGGAACGGCCACCACCACCTTCAACGCCACCAACACCAACGGCGGATGTCGTTTTCCTCTGATGGAGAAGTGCCTAGTCCGCTCACGAGGTGTTCCTCTGCCAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGTCTAAGACCGATTGGCGTCCGCATTTCATTTCGCGACTTGGCCGCCATTCTCGCCGTCATTCTTCTGCTTCCGTGGATTTTCACTACGATGCGCTTAGTTATGCGCTTAATTTTGATGAAGGATACGATGAAGGACATGTTGATGATGCGTTTCCGCTCAGAAATTTCTCCTCTAGGTTACCGGCTTCTCCGCCGAAATCAGCGCCGTCTTCCACGGAGACGTCGAGGGAGATGACCACGGCGTATAGCTAA

mRNA sequence

ATGGACGATTCGAACGAGCATAAAGAAAATGCCTCACCGTCGTCTCTGAAGGCGAAAATCAAATCTTCTCTGTGTTTGTCCTGCTGCCTTCGTAGGCACCGGAACGGCCACCACCACCTTCAACGCCACCAACACCAACGGCGGATGTCGTTTTCCTCTGATGGAGAAGTGCCTAGTCCGCTCACGAGGTGTTCCTCTGCCAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGTCTAAGACCGATTGGCGTCCGCATTTCATTTCGCGACTTGGCCGCCATTCTCGCCGTCATTCTTCTGCTTCCGTGGATTTTCACTACGATGCGCTTAGTTATGCGCTTAATTTTGATGAAGGATACGATGAAGGACATGTTGATGATGCGTTTCCGCTCAGAAATTTCTCCTCTAGGTTACCGGCTTCTCCGCCGAAATCAGCGCCGTCTTCCACGGAGACGTCGAGGGAGATGACCACGGCGTATAGCTAA

Coding sequence (CDS)

ATGGACGATTCGAACGAGCATAAAGAAAATGCCTCACCGTCGTCTCTGAAGGCGAAAATCAAATCTTCTCTGTGTTTGTCCTGCTGCCTTCGTAGGCACCGGAACGGCCACCACCACCTTCAACGCCACCAACACCAACGGCGGATGTCGTTTTCCTCTGATGGAGAAGTGCCTAGTCCGCTCACGAGGTGTTCCTCTGCCAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGTCTAAGACCGATTGGCGTCCGCATTTCATTTCGCGACTTGGCCGCCATTCTCGCCGTCATTCTTCTGCTTCCGTGGATTTTCACTACGATGCGCTTAGTTATGCGCTTAATTTTGATGAAGGATACGATGAAGGACATGTTGATGATGCGTTTCCGCTCAGAAATTTCTCCTCTAGGTTACCGGCTTCTCCGCCGAAATCAGCGCCGTCTTCCACGGAGACGTCGAGGGAGATGACCACGGCGTATAGCTAA

Protein sequence

MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSPLTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGYDEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS
Homology
BLAST of Carg17456 vs. NCBI nr
Match: KAG6586352.1 (hypothetical protein SDJN03_19085, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021198.1 hypothetical protein SDJN02_17886, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.9 bits (821), Expect = 6.5e-84
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP 60
           MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP
Sbjct: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP 60

Query: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120
           LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY
Sbjct: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120

Query: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS
Sbjct: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 161

BLAST of Carg17456 vs. NCBI nr
Match: XP_022938304.1 (uncharacterized protein LOC111444439 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP 60
           MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDG+VPSP
Sbjct: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGDVPSP 60

Query: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120
           LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY
Sbjct: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120

Query: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS
Sbjct: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 161

BLAST of Carg17456 vs. NCBI nr
Match: XP_023536962.1 (uncharacterized protein LOC111798189 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 158/161 (98.14%), Postives = 160/161 (99.38%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP 60
           MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDG+VPSP
Sbjct: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGDVPSP 60

Query: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120
           LTRCSSAKDKSRSRESPESK DWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY
Sbjct: 61  LTRCSSAKDKSRSRESPESKADWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120

Query: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           DEGHVDDAFPLRNFSSRLPASPPKSAPSS+ETSREMTTAYS
Sbjct: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSSETSREMTTAYS 161

BLAST of Carg17456 vs. NCBI nr
Match: XP_022965990.1 (uncharacterized protein LOC111465710 [Cucurbita maxima])

HSP 1 Score: 312.4 bits (799), Expect = 2.3e-81
Identity = 156/161 (96.89%), Postives = 159/161 (98.76%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP 60
           MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDG+VP+P
Sbjct: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGDVPTP 60

Query: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120
           LTRCSSAKDKSRSRESPESKTDWRPHFISRLG HSRRHSSASVDFHYDALSYALNFDEGY
Sbjct: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGLHSRRHSSASVDFHYDALSYALNFDEGY 120

Query: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           DEGHVDDAFPLRNFSSRLPASPPKS PSS+ETSREMTTAYS
Sbjct: 121 DEGHVDDAFPLRNFSSRLPASPPKSEPSSSETSREMTTAYS 161

BLAST of Carg17456 vs. NCBI nr
Match: XP_038890730.1 (homeobox protein MOX-2 [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60
Identity = 130/162 (80.25%), Postives = 137/162 (84.57%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNG-HHHLQRHQHQRRMSFSSDGEVPS 60
           MDDSNEHK N+SPSSLK  +KSSLCLSCCLR+HRNG HHH   H H RRMS SSDG+ P 
Sbjct: 1   MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHHHHHHHHHRRMSISSDGDSPG 60

Query: 61  PLTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEG 120
           PL RCSSAKDKSRSRESPE K D RPHFISRLGRH RRH SAS DF YDALSYALNFDEG
Sbjct: 61  PLMRCSSAKDKSRSRESPEIK-DRRPHFISRLGRHGRRH-SASADFRYDALSYALNFDEG 120

Query: 121 YDEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           YDEGHVDD FPLRNFSSRLPASP KS+PSS+  SREM TA+S
Sbjct: 121 YDEGHVDDDFPLRNFSSRLPASPRKSSPSSSNASREMITAFS 160

BLAST of Carg17456 vs. ExPASy TrEMBL
Match: A0A6J1FDP2 (uncharacterized protein LOC111444439 OS=Cucurbita moschata OX=3662 GN=LOC111444439 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.0e-84
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP 60
           MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDG+VPSP
Sbjct: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGDVPSP 60

Query: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120
           LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY
Sbjct: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120

Query: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS
Sbjct: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 161

BLAST of Carg17456 vs. ExPASy TrEMBL
Match: A0A6J1HQB7 (uncharacterized protein LOC111465710 OS=Cucurbita maxima OX=3661 GN=LOC111465710 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 156/161 (96.89%), Postives = 159/161 (98.76%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSP 60
           MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDG+VP+P
Sbjct: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGDVPTP 60

Query: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNFDEGY 120
           LTRCSSAKDKSRSRESPESKTDWRPHFISRLG HSRRHSSASVDFHYDALSYALNFDEGY
Sbjct: 61  LTRCSSAKDKSRSRESPESKTDWRPHFISRLGLHSRRHSSASVDFHYDALSYALNFDEGY 120

Query: 121 DEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           DEGHVDDAFPLRNFSSRLPASPPKS PSS+ETSREMTTAYS
Sbjct: 121 DEGHVDDAFPLRNFSSRLPASPPKSEPSSSETSREMTTAYS 161

BLAST of Carg17456 vs. ExPASy TrEMBL
Match: A0A5D3BFQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00930 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.9e-58
Identity = 126/167 (75.45%), Postives = 136/167 (81.44%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQ------HQRRMSFSSD 60
           MDDSNEHK N+S S+LK  +KSSLCLSCCLR+HRNGHHHL  H       H RRMS SSD
Sbjct: 1   MDDSNEHKGNSSSSTLKEMLKSSLCLSCCLRKHRNGHHHLHHHHHHHHHGHHRRMSISSD 60

Query: 61  GEVPSPLTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYAL 120
           G+ P PLTRCSSAKDKSRSRE  + K D  P+FISRLGRH RRH SAS DF YDALSY+L
Sbjct: 61  GDSPGPLTRCSSAKDKSRSRECHDIK-DRLPNFISRLGRHGRRH-SASADFRYDALSYSL 120

Query: 121 NFDEGYDEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           NFDEGYDEGHVDD FPLRNFSSRLPASPPKSAPSS+  SREM TA+S
Sbjct: 121 NFDEGYDEGHVDDEFPLRNFSSRLPASPPKSAPSSSTASREMITAFS 165

BLAST of Carg17456 vs. ExPASy TrEMBL
Match: A0A0A0LL60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009350 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.6e-58
Identity = 127/165 (76.97%), Postives = 136/165 (82.42%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHL---QRHQHQRRMSFSSDGE- 60
           MDDSNEHK N+SPSSLK  +KSSLCLSCCLR+HRNGHHHL     H H+R MS SSDGE 
Sbjct: 1   MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHLHHHHHHHHRRMMSISSDGES 60

Query: 61  VPSPLTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALNF 120
            P PL RCSSAKDKSRSRE  + K D  P FISRLGRH RRH SAS DFHYDALSY+LNF
Sbjct: 61  SPGPLMRCSSAKDKSRSRECHDIK-DRLPSFISRLGRHGRRH-SASADFHYDALSYSLNF 120

Query: 121 DEGYDEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           DEGYDEGHVDD FPLRNFSSRLPASPPKS+PS+T  SREM TA+S
Sbjct: 121 DEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 163

BLAST of Carg17456 vs. ExPASy TrEMBL
Match: A0A1S3CDF1 (uncharacterized protein LOC103499607 OS=Cucumis melo OX=3656 GN=LOC103499607 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.6e-58
Identity = 125/167 (74.85%), Postives = 136/167 (81.44%), Query Frame = 0

Query: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQ------HQRRMSFSSD 60
           MDDSNEHK N+S S+LK  +KSSLCLSCCLR+HRNGHHHL  H       H RRMS SSD
Sbjct: 1   MDDSNEHKGNSSSSTLKEMLKSSLCLSCCLRKHRNGHHHLHHHHHHHHHGHHRRMSISSD 60

Query: 61  GEVPSPLTRCSSAKDKSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYAL 120
           G+ P PLTRCSSAKDKSRSRE  + K D  P+FISRLGRH RRH SAS DF YDALSY+L
Sbjct: 61  GDSPGPLTRCSSAKDKSRSRECHDIK-DRLPNFISRLGRHGRRH-SASADFRYDALSYSL 120

Query: 121 NFDEGYDEGHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 162
           NFDEGYDEGHVDD FPLRNFSSRLPASPPKS+PSS+  SREM TA+S
Sbjct: 121 NFDEGYDEGHVDDEFPLRNFSSRLPASPPKSSPSSSTASREMITAFS 165

BLAST of Carg17456 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 7.0e-12
Identity = 54/151 (35.76%), Postives = 77/151 (50.99%), Query Frame = 0

Query: 9   ENASPSSLKAKIKSSLCLSCCLRRHRNGHHHLQRHQHQRRMSFSSDGEVPSPLTRCSSAK 68
           E  +  SL+ K+KS  C++ C R   N HHH            +++    SP       K
Sbjct: 4   ETMTNLSLQKKLKSRFCIAGCFRT-TNHHHHDNIPDDLPSSPVTTEKSTQSPHGGGMKTK 63

Query: 69  DKSRSRESPESKTDWRPHFISRL----------GRHSRRHSSASVDFHYDALSYALNFDE 128
               +R   +S    +   I R+          G+H RRH++   DFHYD  SYALNFD+
Sbjct: 64  SPRLTRTLSKSHEKCK-SLIHRMGGGVGGVGGHGKHIRRHTA---DFHYDPSSYALNFDK 123

Query: 129 GYDEGHVDDAFPLRNFSSRLPASPPKSAPSS 150
           G ++ ++ D FPLRNFS+RLP SPP SA ++
Sbjct: 124 GDEDDNI-DRFPLRNFSARLPHSPPSSAKAA 148

BLAST of Carg17456 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06
Identity = 28/55 (50.91%), Postives = 33/55 (60.00%), Query Frame = 0

Query: 99  SSASVDFHYDALSYALNFDEGYDEGHVDDAFPLRNFSSRLPASPPKSAPSSTETS 154
           SS    F YD LSY+LNFD+G   GH DD FP R++S R  A    S P ST+ S
Sbjct: 119 SSDQGKFRYDQLSYSLNFDDGNQTGHFDDEFPYRDYSMRFAA---PSLPVSTKCS 170

BLAST of Carg17456 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-05
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0

Query: 103 VDFHYDALSYALNFDEGYDEGHVDDAFPLRNFSSRLPASPPKSAPSSTETS 154
           V F YD+ SY+LNFD+G   GH +D FP R++S R  A    S P ST+ S
Sbjct: 693 VSFRYDSWSYSLNFDDGKQTGHFEDEFPYRDYSMRFAA---PSLPVSTKCS 740

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6586352.16.5e-84100.00hypothetical protein SDJN03_19085, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022938304.11.4e-8399.38uncharacterized protein LOC111444439 [Cucurbita moschata][more]
XP_023536962.11.6e-8298.14uncharacterized protein LOC111798189 [Cucurbita pepo subsp. pepo][more]
XP_022965990.12.3e-8196.89uncharacterized protein LOC111465710 [Cucurbita maxima][more]
XP_038890730.11.0e-6080.25homeobox protein MOX-2 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FDP27.0e-8499.38uncharacterized protein LOC111444439 OS=Cucurbita moschata OX=3662 GN=LOC1114444... [more]
A0A6J1HQB71.1e-8196.89uncharacterized protein LOC111465710 OS=Cucurbita maxima OX=3661 GN=LOC111465710... [more]
A0A5D3BFQ43.9e-5875.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LL608.6e-5876.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009350 PE=4 SV=1[more]
A0A1S3CDF18.6e-5874.85uncharacterized protein LOC103499607 OS=Cucumis melo OX=3656 GN=LOC103499607 PE=... [more]
Match NameE-valueIdentityDescription
AT5G35090.17.0e-1235.76unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
AT3G01430.12.6e-0650.91BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:... [more]
AT5G14890.11.3e-0549.02NHL domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..66
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 10..147
NoneNo IPR availablePANTHERPTHR33168:SF60SUBFAMILY NOT NAMEDcoord: 10..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17456-RACarg17456-RAmRNA