Carg17318 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17318
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein BIG GRAIN 1-like E
Location	Carg_Chr18: 10555350 .. 10556018 (+)
RNA-Seq Expression	Carg17318
Synteny	Carg17318

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCCGCCACCCACCTCCCCGGCAACCCAGCTAAGATCTTCCACAAACCACCACACCGGCGGAACGATTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGTTAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAGCTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATCTCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGACTTCGATTGA

mRNA sequence

ATGTCCGCCGCCACCCACCTCCCCGGCAACCCAGCTAAGATCTTCCACAAACCACCACACCGGCGGAACGATTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGTTAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAGCTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATCTCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGACTTCGATTGA

Coding sequence (CDS)

ATGTCCGCCGCCACCCACCTCCCCGGCAACCCAGCTAAGATCTTCCACAAACCACCACACCGGCGGAACGATTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGTTAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAGCTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATCTCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGACTTCGATTGA

Protein sequence

MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD

Homology

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BLAST of Carg17318 vs. NCBI nr
Match: KAG7013094.1 (Protein BIG GRAIN 1-like E, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434.1 bits (1115), Expect = 7.2e-118
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH
Sbjct: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60

Query: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120
           SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS
Sbjct: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120

Query: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180
           QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA
Sbjct: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180

Query: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 223
           SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD
Sbjct: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 222

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BLAST of Carg17318 vs. NCBI nr
Match: XP_022945530.1 (protein BIG GRAIN 1-like E [Cucurbita moschata] >KAG6574036.1 Protein BIG GRAIN 1-like E, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 219/222 (98.65%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MSAATHL GNP KIFHKPPHRRN STELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH
Sbjct: 1   MSAATHLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60

Query: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120
           SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS
Sbjct: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120

Query: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180
           QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA
Sbjct: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180

Query: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 223
           SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD
Sbjct: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 222

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BLAST of Carg17318 vs. NCBI nr
Match: XP_022968639.1 (protein BIG GRAIN 1-like E [Cucurbita maxima])

HSP 1 Score: 417.9 bits (1073), Expect = 5.4e-113
Identity = 214/222 (96.40%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MSAATHLPGNP KIFHKPPHRRNDSTELDVFEAARYFSGSNEL YTNTSSFTH II EDH
Sbjct: 1   MSAATHLPGNPDKIFHKPPHRRNDSTELDVFEAARYFSGSNELAYTNTSSFTHKIIIEDH 60

Query: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120
           S RRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS
Sbjct: 61  SRRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120

Query: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180
           QKKKKPKNG KNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYK+IRNLLDQTRPA
Sbjct: 121 QKKKKPKNGTKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKEIRNLLDQTRPA 180

Query: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 223
           SKNLGNVKQNSDHPTRKIKDVD+DARSDSSSDLFELRIYDFD
Sbjct: 181 SKNLGNVKQNSDHPTRKIKDVDEDARSDSSSDLFELRIYDFD 222

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BLAST of Carg17318 vs. NCBI nr
Match: XP_023542013.1 (protein BIG GRAIN 1-like E [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.9 bits (1073), Expect = 5.4e-113
Identity = 215/222 (96.85%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MSAATHL GNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTH IIREDH
Sbjct: 1   MSAATHLSGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHKIIREDH 60

Query: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120
           SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS
Sbjct: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120

Query: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180
           QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYK+IRNLLDQTRP 
Sbjct: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKEIRNLLDQTRPP 180

Query: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 223
           SKNLGNVKQNSD PTRKIKDVD DA+SDSSSDLFELRIYDFD
Sbjct: 181 SKNLGNVKQNSDLPTRKIKDVDDDAQSDSSSDLFELRIYDFD 222

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BLAST of Carg17318 vs. NCBI nr
Match: XP_038892897.1 (protein BIG GRAIN 1-like E [Benincasa hispida])

HSP 1 Score: 261.2 bits (666), Expect = 8.4e-66
Identity = 155/248 (62.50%), Postives = 174/248 (70.16%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYT-----NTSSFTHNI 60
           MS   HL GNP K+F K  HRR DS ELDVFEAARYFSGSNEL YT      TS F+  I
Sbjct: 1   MSITGHLSGNPDKLFRKSLHRRKDSGELDVFEAARYFSGSNELPYTAATTYETSLFSQKI 60

Query: 61  IREDHSSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIK-EKKHRQQPSSPAGRLANFLN 120
            REDH  RRGGRMSLDLP+RTN    PPPPYTAEK  IK +KK RQQPSSP GRLANFLN
Sbjct: 61  FREDHGDRRGGRMSLDLPIRTNVIPLPPPPYTAEKQSIKDQKKQRQQPSSPGGRLANFLN 120

Query: 121 SLFNQSASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------- 180
           SLFNQS+S+KKKKPKN ++N++ H EIG +KRRSSLS+LIDSK SSN             
Sbjct: 121 SLFNQSSSKKKKKPKNPIRNEDLHQEIGGKKRRSSLSTLIDSKFSSNSSKISGFRTPPAP 180

Query: 181 ----ISAPNKNYKQIRNLLDQTRPA--SKNLGN-VKQNSDHPTRKIKDVDQDARSDSSSD 221
               +  P+KNYK+IR+ LDQ R A  SKNLGN + +      RKI D D+   SDSSSD
Sbjct: 181 NCCTVQTPSKNYKEIRSFLDQKRAANSSKNLGNGIDKKKSEMWRKINDPDEGDESDSSSD 240

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BLAST of Carg17318 vs. ExPASy Swiss-Prot
Match: Q93Z37 (Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana OX=3702 GN=At1g69160 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13
Identity = 92/281 (32.74%), Postives = 123/281 (43.77%), Query Frame = 0


Query: 20  HRRNDSTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLD 79
           H+RN S ELDVFEAA YF G NE     + +T  + +N  RE++  R      G R+SLD
Sbjct: 22  HKRN-SEELDVFEAAVYF-GYNEASSGDHGHTQKYGYNAAREENPRRWGILGGGRRISLD 81

Query: 80  LPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQK 139
           LP+R +                T  K  +   +H+ QPSSP G++A+FLNSLF+Q+ S+K
Sbjct: 82  LPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHK-QPSSPGGKIASFLNSLFHQAGSKK 141

Query: 140 ---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLI 199
              K K K    + E   EI       R+RRSS+S                      SLI
Sbjct: 142 NKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTTTTTASSSSKSLI 201

Query: 200 DSKSSS------NISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK------- 221
            S SS        ++ P KNYKQ  N    T+   +      +       K+K       
Sbjct: 202 SSSSSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEYSWLDEKLKVMESLSE 261

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BLAST of Carg17318 vs. ExPASy TrEMBL
Match: A0A6J1G172 (protein BIG GRAIN 1-like E OS=Cucurbita moschata OX=3662 GN=LOC111449738 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 219/222 (98.65%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MSAATHL GNP KIFHKPPHRRN STELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH
Sbjct: 1   MSAATHLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60

Query: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120
           SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS
Sbjct: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120

Query: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180
           QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA
Sbjct: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180

Query: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 223
           SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD
Sbjct: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 222

[Close]

BLAST of Carg17318 vs. ExPASy TrEMBL
Match: A0A6J1I085 (protein BIG GRAIN 1-like E OS=Cucurbita maxima OX=3661 GN=LOC111467800 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-113
Identity = 214/222 (96.40%), Postives = 216/222 (97.30%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MSAATHLPGNP KIFHKPPHRRNDSTELDVFEAARYFSGSNEL YTNTSSFTH II EDH
Sbjct: 1   MSAATHLPGNPDKIFHKPPHRRNDSTELDVFEAARYFSGSNELAYTNTSSFTHKIIIEDH 60

Query: 61  SSRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120
           S RRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS
Sbjct: 61  SRRRGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSAS 120

Query: 121 QKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQTRPA 180
           QKKKKPKNG KNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYK+IRNLLDQTRPA
Sbjct: 121 QKKKKPKNGTKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKEIRNLLDQTRPA 180

Query: 181 SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFELRIYDFD 223
           SKNLGNVKQNSDHPTRKIKDVD+DARSDSSSDLFELRIYDFD
Sbjct: 181 SKNLGNVKQNSDHPTRKIKDVDEDARSDSSSDLFELRIYDFD 222

[Close]

BLAST of Carg17318 vs. ExPASy TrEMBL
Match: A0A6J1D6V3 (protein BIG GRAIN 1-like E OS=Momordica charantia OX=3673 GN=LOC111017581 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.1e-61
Identity = 154/255 (60.39%), Postives = 171/255 (67.06%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MS  +HL  NP KIF K  HRRN+S ELDVFEAARYFSG NE+ YT    +   I REDH
Sbjct: 1   MSITSHLSDNPDKIFKKSFHRRNNSGELDVFEAARYFSGCNEVSYTGGGGY-QKIFREDH 60

Query: 61  SSRRG-GRMSLDLPLRTNAA--PPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQ 120
             RRG GRMSLDLP+RTN    PPPPYTAEK  IKEKKHRQQPSSP GRLANFLNSLFNQ
Sbjct: 61  GGRRGAGRMSLDLPIRTNVVPLPPPPYTAEKQTIKEKKHRQQPSSPGGRLANFLNSLFNQ 120

Query: 121 SASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNIS---------------A 180
           SAS+KKKKPKN +K+++       RKRRSSLS+LIDSKSSSN S                
Sbjct: 121 SASKKKKKPKNPIKSEDQEIGSAGRKRRSSLSNLIDSKSSSNFSVSGFRTPPTPNCTLQT 180

Query: 181 PNKNYKQIRNLLDQTRPASKNLG-----------NVKQNSD----HPTRKIKDVDQDARS 223
           PNKNYK+IR LL     ++ NLG           N KQNSD    +  RKI  +D+ A S
Sbjct: 181 PNKNYKEIRTLLSS---SNNNLGNGSFNQVAYNNNYKQNSDRHQENEIRKINGLDEGADS 240

[Close]

BLAST of Carg17318 vs. ExPASy TrEMBL
Match: A0A0A0KSX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606790 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.7e-59
Identity = 144/245 (58.78%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MS  +HL G+P KIF K  HRR DS ELDVFEAARYF+GSNE  YT  +++  ++    H
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAATYETSLF---H 60

Query: 61  SSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIKE-KKHRQQPSSPAGRLANFLNSLFNQ 120
             RRGGRMSLDLPLRTN    P PPYTAEK  +K+ KKHRQQPSSP GRLANFLNSLFNQ
Sbjct: 61  GGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLANFLNSLFNQ 120

Query: 121 SASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ 180
           SAS+KKKKPKN +K ++ HHE+GARKRRSSLS+LID+KSSS+                  
Sbjct: 121 SASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSSHSSSKISGFRTPPAPNCCT 180

Query: 181 ISAPNKNYKQIRNLLDQTRPA----SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFE 221
           +  PNKNY +IR+ LDQ R      SK  G   Q S+   RK+ D D+   SDSSSDLFE
Sbjct: 181 VQTPNKNYMEIRSFLDQKREGINYYSKKNGINNQKSE--MRKMNDQDEGDESDSSSDLFE 240

[Close]

BLAST of Carg17318 vs. ExPASy TrEMBL
Match: A0A5D3CB02 (Protein BIG GRAIN 1-like E OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00190 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 9.1e-58
Identity = 143/245 (58.37%), Postives = 162/245 (66.12%), Query Frame = 0


Query: 1   MSAATHLPGNPAKIFHKPPHRRNDSTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MS  +HL G+P KIF K  HRR DS ELDVFEAA YFSGSNE    NT++     +   H
Sbjct: 1   MSVTSHLSGHPNKIFRKSLHRRKDSDELDVFEAASYFSGSNEPCNYNTATTYETSL--FH 60

Query: 61  SSRRGGRMSLDLPLRTNA--APPPPYTAEKPPIKE-KKHRQQPSSPAGRLANFLNSLFNQ 120
             RRGGRMSLDLPLRTN    PPPPYTAEK  IK+ KKHRQQPSSP GRLANFLNSLFNQ
Sbjct: 61  GGRRGGRMSLDLPLRTNVIPLPPPPYTAEKQSIKDPKKHRQQPSSPGGRLANFLNSLFNQ 120

Query: 121 SASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ 180
           S S+KKKKPKN +K ++ HHEIGARKRRSSLS+LID+KSSSN                  
Sbjct: 121 SGSKKKKKPKNSIKTEDLHHEIGARKRRSSLSTLIDTKSSSNNSSKVSGFRTPPAPNCCS 180

Query: 181 ISAPNKNYKQIRNLLDQTRP----ASKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFE 221
           +  P+K Y +IR+ LDQ R     + KN      N     RK+ D D+   SDSSSDLFE
Sbjct: 181 VQTPSKKYMEIRSFLDQKREGNYYSKKNNRGNGINEKSEMRKMNDEDEGDESDSSSDLFE 240

[Close]

BLAST of Carg17318 vs. TAIR 10
Match: AT1G69160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits to 172 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 92/281 (32.74%), Postives = 123/281 (43.77%), Query Frame = 0


Query: 20  HRRNDSTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLD 79
           H+RN S ELDVFEAA YF G NE     + +T  + +N  RE++  R      G R+SLD
Sbjct: 22  HKRN-SEELDVFEAAVYF-GYNEASSGDHGHTQKYGYNAAREENPRRWGILGGGRRISLD 81

Query: 80  LPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQK 139
           LP+R +                T  K  +   +H+ QPSSP G++A+FLNSLF+Q+ S+K
Sbjct: 82  LPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHK-QPSSPGGKIASFLNSLFHQAGSKK 141

Query: 140 ---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLI 199
              K K K    + E   EI       R+RRSS+S                      SLI
Sbjct: 142 NKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTTTTTASSSSKSLI 201

Query: 200 DSKSSS------NISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK------- 221
            S SS        ++ P KNYKQ  N    T+   +      +       K+K       
Sbjct: 202 SSSSSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEYSWLDEKLKVMESLSE 261

The following BLAST results are available for this feature:

BLAST of Carg17318 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013094.1	7.2e-118	100.00	Protein BIG GRAIN 1-like E, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945530.1	2.6e-115	98.65	protein BIG GRAIN 1-like E [Cucurbita moschata] >KAG6574036.1 Protein BIG GRAIN ...	[more]
XP_022968639.1	5.4e-113	96.40	protein BIG GRAIN 1-like E [Cucurbita maxima]	[more]
XP_023542013.1	5.4e-113	96.85	protein BIG GRAIN 1-like E [Cucurbita pepo subsp. pepo]	[more]
XP_038892897.1	8.4e-66	62.50	protein BIG GRAIN 1-like E [Benincasa hispida]	[more]

BLAST of Carg17318 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z37	1.7e-13	32.74	Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana OX=3702 GN=At1g69160 PE=2 SV=...	[more]

BLAST of Carg17318 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G172	1.2e-115	98.65	protein BIG GRAIN 1-like E OS=Cucurbita moschata OX=3662 GN=LOC111449738 PE=3 SV...	[more]
A0A6J1I085	2.6e-113	96.40	protein BIG GRAIN 1-like E OS=Cucurbita maxima OX=3661 GN=LOC111467800 PE=3 SV=1	[more]
A0A6J1D6V3	5.1e-61	60.39	protein BIG GRAIN 1-like E OS=Momordica charantia OX=3673 GN=LOC111017581 PE=3 S...	[more]
A0A0A0KSX8	1.7e-59	58.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606790 PE=3 SV=1	[more]
A0A5D3CB02	9.1e-58	58.37	Protein BIG GRAIN 1-like E OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Carg17318 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69160.1	1.2e-14	32.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR33541:SF11	PROTEIN BIG GRAIN 1-LIKE E	coord: 181..222 coord: 10..161
IPR039621	Protein BIG GRAIN 1-like	PANTHER	PTHR33541	PROTEIN BIG GRAIN 1-LIKE A-RELATED	coord: 181..222 coord: 10..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17318-RA	Carg17318-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005886	plasma membrane