Carg17257 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17257
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	binding partner of ACD11 1-like
Location	Carg_Chr18: 10892250 .. 10897127 (+)
RNA-Seq Expression	Carg17257
Synteny	Carg17257

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCTCACAATTAGACTCTTCATCAACCCCTTATCTCTTTCATTTACATACAGTTCCAACATTGAGCTTAATTATTTTCGTGTACCATATCAAATCCTGTATCCAAACTTAATTACATAACATGGGTGTGTGCAGTGCTCTGAAGCTGACATTAGGAGGCCCGCTTACTCTTAATAGCCATAGAACACCATATATGTGCTTACATGCGCAACCAAGTTGAAATTTTTAGCCCCAGTTTGGAGACAGATCGAGCAGGGACGGTATGGCCATGGCCGCATGCTGCTTTCCTTCTTATTTCAAGCTTATAATAAGCAGTATTAGGACTGTGGTCAAGTTGTCCTGTTCGACCCCAACAAATAGTGGATTACTAATTCTATAAACACTTCGAGTTTCTTTTCATGGATCCCATATCTCTTTGTCCATCAACATATCATCCCTCTTCTTCTAACACCTGCTGCCTTGCTAACATCAGTATAGATTTAGCATAGCAGGTAGCAGCCCACAAGCCTTCTTCTTAAGTTTAGACCATAATGTCGTCCAGAAGCTCGCGTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGATTCGCAATGCGCGTTCCTCCTCCAGGGTATCTCTGTTTTTCTACACTCTGTTCCTGTTTATTTCAGAAATGGGTTACACCCACAATCTCATTCTTCTTAATTTGTGGGGTTTTATAGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGGGAGGTGGGCGACTTAAGCGACCGATTATCAGAGCTGTTGCTATCAACTGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATGTAATAAAGAATGCTCTATTATCTCTATCATTCTTCTTCTTCTTCTTCTATAGATTTTGATCTTCATCAGCTCAGATAATATGGAATATGCCTACACAAAATTATATATATATATATATCGTTGTTATAAAGTCGTATAATAAAAGGGCTTGTCTAGAGTTCGTTTTAAATCATATGAATTACCATCACTATGCTCTGAGATCAATTTTGTTTATAAATTTTTCAAAAGGCCGCCGGTTTTGTTCTATCTTATTCATGGTTATTATTGTTATCTTTCCTTTCTTAGTGGTGTTGCTTTATAAAGAAAGTCTGAATGAGCTTTAAAGTCCTCTGTTTTGGTGCCCACAAAACCCCATTTGACTGTGACACCACAGAAGAAGAGGAGAGTTCTGAAAGTTGTTTTCCTTTTCCCTTCAAAACAAAAATTTCGAATTCCTGCACGTGCCAGTTTGTGTAGCATTTAAGACCATACCCTTTTCAAATCTCCTCTGATTTCCTAAACAGTTCATATTCTCTGGTGTTTCTTTCTGAGGAATTATTGGGAGTGACAGTTCTGAACGACCCTTTTTCTAGCCACCATTAATCATGGGGTTTTGTTAAAAAGTATGAAGAACATGAGGATTTAGGATAATATAATGTGGAAAACTCAAGCTAAACGTAGTTAACAATGTATAAACGAGGTTGCTTTATGCTTGAAAAAGAGAAAAGAACAGAGGATACCCAAGTCAAAGCGTCAGAGTGGAAGAAGCTCTCGTGAGTTGTGAAAGTTAGCAGGAGGTAGCAGAAGATCCCCACTGACAAACAGAAGAAACATCGAAGCCCCAAAGTCTTGTCGACCGACTGCTGTCTTTTCTGCATAACCTTTCATAAAATTTTAATGGTTGGTTCCATAAATGGAATCCAAAGAAGAGGAATGCGGACTTACTTCATATGTTTGTTTCTGAGTGAATCGCTTTTGAATGTGATCCATTCAAAAGAGGAGCCTCTTACCCATTAAGTAATTTGGTCTAAAGTTCTACGACCCAGATGTTTGCAGGCTTAAATTATGAATCAAAGAAGGCCCATTGTTCAATCTGAAGCCCAGCTCAGCCCACTGAGCTCTAAAGTTCTTCAGTTCCATTGACGCCTCTTTTTCTTCAGAAACTTCATTTTCTGCTAGTCAATTCCATTGTCTCCTCTGCAAGTTACATTTCAACGGGACAAGAGACGAATCAATTTACTGTTGCAGCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACGGAGAAGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTATTCATTTCTTCCAATTGGGAGTTTGATTTCATGTCCTTGACTCTGTAATCCCATGATCCATATATTTAAAAGACATCAATAGATCTTTCTAAATGTGATCAAGTTTGAAGAGGCTGTTTAGTAATTCATACCTTGAAATTATGGCCTTCTTGTTTGATTTTGTTTTAGTTTTTTGTTCTTTCAAAAGCGCTTGGTGTTAGGATTTGTGGTTTCATGAAAACAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTCATTCAAAGATGCTTACTCTCAAGAGACTGCTTGCCTGCTGAGTGTGAGTATTCAATTTATAAATCCTGAATTAATCAATGTGTTTCATGTGGCAGTTTTGATTGCAAAAGGAAAAAGAGAGGCATTTTTTGTTCTTCTCAATTGGAAAAACTGTAGGCACAATTGGCTGTGGCGTGTTGTAAGACTACTGCTAGCAGATATTGTCTGCTTTGGCTCGATACGTATTGCCGTCAGCCTCGTGGTTTTAAAACGCGTCTATTAGAGCTAGACACCGTCTCTATACCCGAGCTTATAAGAATGCGGAAACCTCTCCCTAGTAGATGCGTTTTAAAATCGTGAGGCGAGGCTGACGGCGATACGCAACGGGTCAAAATGGACAATATCTGCTAACGGTGGTCTTAGGCTGTAACGAATAGTATCAGAGACAAACACTAGACGGTGTACCTGCGAGAATGCTGGCCTCCAAGGGAGGTGGATTATGAGATCCCACATCGGTTGGAGAGGAGAACAAAACATTCCTTATAAGAATGTGAAAACCTCTCCCTAGTAGACACGTTTTAAAACTGTGAAATTGACGGCAATACGTAACGAGCCAAAGTGGATAATATCTACTAGCTGTGGACTTGGGCAGTTACTAAGCAGTGAAGGGTCCTTTGGTTTCCTCAAGTAATGCCCCTTCGTTAAATCGACAACAATGATTAGAATCGAAATAACATAGAAAATGGCTTTCAAATAATATAAATTGCTTCATCATCATTGAACTGTAAAAGTGTGGTTTTGGCTTCATCAAATTTGAAGCAGCCTTAATAGGAATTTGCTACTGCGCTTGAATGTTCGACATGGATGTAACTATGCGTTCTATTGAAAAGAAAAACGGACCCGTTTATTATTGTATAGAGATGGCATTTAAATGTGTTAGGCACATGCAACATTGTTGTTGTTGTTGAATCTGTGATTAGAGATAACAACTTTGTTAGCATTTAGAATTCATCATTTGTAATACTTATTGTTGAATCTGCAGAACGCATTTATCTCACCATCTTCTCTTTCGCTGCAAATTTGCATTGTTTTTAGGAATGAACTTGATGGAATTTTTACTATTTCAAATGAATTTCCTCTTGGCATCAAATGATTATAAGGAATTTCTATATGGATACTTTCAGTTTGTGCACTTCACCTGTTCGAGTTTGATCATTCTGTTTATGTTCTGTCTATTATTTGGTTTTCAATCAACAATCATTTCTGGTGATTTGGTTAATGATCATGTTGTAGAGTCCAATATCTGTTCATTGCAGGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATTTCTGGAGCAGGCCTTCCGGTTACCATGAAGAAGATGGTACTCCTCCTGTAAGTATCGAAAATCGACAAATGATATTCATTAGTTTTTTCCAACTCTTGAAATTTGCATATGTTTAGTTCCTATGGTCGAACTTGATTAATTGACGAGTTCTTTATCGTATAGTCGGCTCAAAGAAGTCAGTTTGTTTCCACCGCTGGAACCGCAGTGTCCATGGCCCAGGACGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTTACGAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGATTTGAGTAACAGAATTGGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCAGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATGTCCGATGCCCTGAATCGAGCTGCCAAAGCTGCAGCTGACTTGGGTAGTCGTGGTCTCGAACATTAAGACGTTAGAGAGTCCTTCTGCTCATCCATTGTAAATAAAGCACTGATATTTTAATCAGAACGTACATATCTGAAAGCTGTATGTATAAATTTTACATTTCATAGAGTTCAATCACACCAGTCATTTGAACCTCTAAAATTTGCTATATTTTAGCCTCTGAATAGTCGGTAAAATACGAGTCGAATCGTCTCCCAGATTGTACTTTTTACTATCCTGCTTACAGATTGTCTTCTCCTTAATCTGTTTGTTCGTTGAAGTTACTCTCAAATTCGATAGACTTATTTGGTTCGTTTAGACTGTTGTACTGTCTATAGGGATGCCATATGGATGGATGCATGATTTAGGCGCAACAAGAATGAAGTCCCGCAAGCAATATCATGTTTTTGCCGCCTAGGATGGTTCCTTCCAG

mRNA sequence

CATCCTCACAATTAGACTCTTCATCAACCCCTTATCTCTTTCATTTACATACAGTTCCAACATTGAGCTTAATTATTTTCGTGTACCATATCAAATCCTGTATCCAAACTTAATTACATAACATGGGTGTGTGCAGTGCTCTGAAGCTGACATTAGGAGGCCCGCTTACTCTTAATAGCCATAGAACACCATATATGTGCTTACATGCGCAACCAAGTTGAAATTTTTAGCCCCAGTTTGGAGACAGATCGAGCAGGGACGGTATGGCCATGGCCGCATGCTGCTTTCCTTCTTATTTCAAGCTTATAATAAGCAGTATTAGGACTGTGGTCAAGTTGTCCTGTTCGACCCCAACAAATAGTGGATTACTAATTCTATAAACACTTCGAGTTTCTTTTCATGGATCCCATATCTCTTTGTCCATCAACATATCATCCCTCTTCTTCTAACACCTGCTGCCTTGCTAACATCAGTATAGATTTAGCATAGCAGGTAGCAGCCCACAAGCCTTCTTCTTAAGTTTAGACCATAATGTCGTCCAGAAGCTCGCGTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGATTCGCAATGCGCGTTCCTCCTCCAGGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGGGAGGTGGGCGACTTAAGCGACCGATTATCAGAGCTGTTGCTATCAACTGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACGGAGAAGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTCATTCAAAGATGCTTACTCTCAAGAGACTGCTTGCCTGCTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATTTCTGGAGCAGGCCTTCCGGTTACCATGAAGAAGATGGTACTCCTCCTTCGGCTCAAAGAAGTCAGTTTGTTTCCACCGCTGGAACCGCAGTGTCCATGGCCCAGGACGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTTACGAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGATTTGAGTAACAGAATTGGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCAGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATGTCCGATGCCCTGAATCGAGCTGCCAAAGCTGCAGCTGACTTGGGTAGTCGTGGTCTCGAACATTAAGACGTTAGAGAGTCCTTCTGCTCATCCATTGTAAATAAAGCACTGATATTTTAATCAGAACGTACATATCTGAAAGCTGTATGTATAAATTTTACATTTCATAGAGTTCAATCACACCAGTCATTTGAACCTCTAAAATTTGCTATATTTTAGCCTCTGAATAGTCGGTAAAATACGAGTCGAATCGTCTCCCAGATTGTACTTTTTACTATCCTGCTTACAGATTGTCTTCTCCTTAATCTGTTTGTTCGTTGAAGTTACTCTCAAATTCGATAGACTTATTTGGTTCGTTTAGACTGTTGTACTGTCTATAGGGATGCCATATGGATGGATGCATGATTTAGGCGCAACAAGAATGAAGTCCCGCAAGCAATATCATGTTTTTGCCGCCTAGGATGGTTCCTTCCAG

Coding sequence (CDS)

ATGTCGTCCAGAAGCTCGCGTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGATTCGCAATGCGCGTTCCTCCTCCAGGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGGGAGGTGGGCGACTTAAGCGACCGATTATCAGAGCTGTTGCTATCAACTGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACGGAGAAGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTCATTCAAAGATGCTTACTCTCAAGAGACTGCTTGCCTGCTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATTTCTGGAGCAGGCCTTCCGGTTACCATGAAGAAGATGGTACTCCTCCTTCGGCTCAAAGAAGTCAGTTTGTTTCCACCGCTGGAACCGCAGTGTCCATGGCCCAGGACGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTTACGAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGATTTGAGTAACAGAATTGGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCAGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATGTCCGATGCCCTGAATCGAGCTGCCAAAGCTGCAGCTGACTTGGGTAGTCGTGGTCTCGAACATTAA

Protein sequence

MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

Homology

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BLAST of Carg17257 vs. NCBI nr
Match: KAG7013155.1 (Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 641.7 bits (1654), Expect = 3.5e-180
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60
           MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR
Sbjct: 1   MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60

Query: 61  SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGLSPKATEKDIL 120
           SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGLSPKATEKDIL
Sbjct: 61  SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGLSPKATEKDIL 120

Query: 121 DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDE 180
           DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDE
Sbjct: 121 DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDE 180

Query: 181 EFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAK 240
           EFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAK
Sbjct: 181 EFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAK 240

Query: 241 AFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA 300
           AFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA
Sbjct: 241 AFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA 300

Query: 301 AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH 342
           AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Sbjct: 301 AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH 341

[Close]

BLAST of Carg17257 vs. NCBI nr
Match: KAG6574098.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 640.2 bits (1650), Expect = 1.0e-179
Identity = 340/341 (99.71%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60
           MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR
Sbjct: 1   MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60

Query: 61  SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGLSPKATEKDIL 120
           SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGLSPKATEKDIL
Sbjct: 61  SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLIENMNPGGYTVEVTGLSPKATEKDIL 120

Query: 121 DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDE 180
           DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDE
Sbjct: 121 DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVCITRWGHFDE 180

Query: 181 EFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAK 240
           EFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAK
Sbjct: 181 EFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGKDTFTKAK 240

Query: 241 AFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA 300
           AFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA
Sbjct: 241 AFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTA 300

Query: 301 AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH 342
           AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGL+H
Sbjct: 301 AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLKH 341

[Close]

BLAST of Carg17257 vs. NCBI nr
Match: XP_022945905.1 (binding partner of ACD11 1-like [Cucurbita moschata])

HSP 1 Score: 474.6 bits (1220), Expect = 7.4e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. NCBI nr
Match: XP_023541311.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467.6 bits (1202), Expect = 9.1e-128
Identity = 242/244 (99.18%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSG HEEDGTP SAQRSQFVSTAGTAVSMA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGDHEEDGTPASAQRSQFVSTAGTAVSMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. NCBI nr
Match: XP_022968306.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 466.8 bits (1200), Expect = 1.5e-127
Identity = 240/244 (98.36%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTP SAQRSQF ST GTAVSMA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPASAQRSQFASTTGTAVSMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALF+SDALNRAAKAAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFISDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.8e-33
Identity = 96/241 (39.83%), Postives = 138/241 (57.26%), Query Frame = 0


Query: 104 TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 163
           +V+V  LS  ATE DI +FF+FSG +E ++I +S E   +AYV+FK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 164 TIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKT 223
           +I DQ V I       E    +S P+  H E  +          S A + V  A+DVV +
Sbjct: 67  SIADQSVII-------ELAPNYSPPAAPHAETQS----------SGAESVVQKAEDVVSS 126

Query: 224 MLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTM 283
           MLA G++LGKD   KAKAFDE H  ++TA A VA L  +IGL+  + AG     E  K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 284 DEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGL 341
           D+ + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+AA ++G +  
Sbjct: 187 DQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK 227

[Close]

BLAST of Carg17257 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-24
Identity = 70/93 (75.27%), Postives = 78/93 (83.87%), Query Frame = 0


Query: 2  SSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRS 61
          S RSSRSR+S   SS ISD+QI+DL+SKLQ LIPE+R  R S +VSASKVLQETCNYIR+
Sbjct: 3  SRRSSRSRQSG--SSRISDDQISDLVSKLQHLIPELRR-RRSDKVSASKVLQETCNYIRN 62

Query: 62 LQREVGDLSDRLSELLLSTDPESAQAAIIRSLL 95
          L REV DLSDRLSELL STD  SA+AAIIRSLL
Sbjct: 63 LHREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of Carg17257 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 1  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60
          MSSR SRSR+S   SS I+DEQI+DL+SKLQ L+PE R  RS+ RV +S+VLQETCNYIR
Sbjct: 1  MSSRRSRSRQSG--SSRITDEQISDLVSKLQDLLPEAR-LRSNDRVPSSRVLQETCNYIR 60

Query: 61 SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLI 96
          SL +EV DLS+RLSELL ++D  SAQAAIIRSLL+
Sbjct: 61 SLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of Carg17257 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 1  MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60
          MSSR SRSR+S   SS I+DEQI+DL+SKLQ L+PE R  RS+ RV +S+VLQETCNYIR
Sbjct: 1  MSSRRSRSRQSG--SSRITDEQISDLVSKLQDLLPEAR-LRSNDRVPSSRVLQETCNYIR 60

Query: 61 SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLI 96
          SL +EV DLS+RLSELL ++D  SAQAAIIRSLL+
Sbjct: 61 SLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of Carg17257 vs. ExPASy Swiss-Prot
Match: Q9LXG5 (Transcription factor PRE2 OS=Arabidopsis thaliana OX=3702 GN=PRE2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-22
Identity = 61/90 (67.78%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 5  SSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQR 64
          SSR  R +  SS ISD+QI DLISKL+Q IPEIR  R S+ VSASKVLQETCNYIR+L +
Sbjct: 3  SSRRSRQASSSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNK 62

Query: 65 EVGDLSDRLSELLLSTDPESAQAAIIRSLL 95
          E  DLSDRL++LL S DP S QAA+IRSL+
Sbjct: 63 EADDLSDRLTQLLESIDPNSPQAAVIRSLI 92

[Close]

BLAST of Carg17257 vs. ExPASy TrEMBL
Match: A0A6J1G2B1 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450009 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 3.6e-130
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. ExPASy TrEMBL
Match: A0A6J1HUH9 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467575 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 7.5e-128
Identity = 240/244 (98.36%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTP SAQRSQF ST GTAVSMA
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPASAQRSQFASTTGTAVSMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK
Sbjct: 121 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALF+SDALNRAAKAAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFISDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. ExPASy TrEMBL
Match: A0A0A0KSM6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 4.1e-118
Identity = 221/244 (90.57%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED TP SAQRSQF+S+AG AV+MA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           Q+VVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGYEA K
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           ++DEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. ExPASy TrEMBL
Match: A0A5D3CVI0 (Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00120 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.9e-117
Identity = 219/244 (89.75%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED T  SAQRSQF+S+AG AV+MA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           Q+VVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAG+EA K
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           ++DEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. ExPASy TrEMBL
Match: A0A1S3BET5 (binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.9e-117
Identity = 219/244 (89.75%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
           CLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED T  SAQRSQF+S+AG AV+MA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           Q+VVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAG+EA K
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 278 TMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 337
           ++DEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 338 GLEH 342
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of Carg17257 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-79
Identity = 156/238 (65.55%), Postives = 185/238 (77.73%), Query Frame = 0


Query: 102 GYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLS 161
           GY VEVTGLSP  T  D++DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 162 GATIVDQRVCITRWGHFDEEFDFWSRPS-GYHEEDGTPPSAQRSQFVSTAGTAVSMAQDV 221
           GATI+DQRVCITRWG   EEFDFW+  S G+ +E  +   AQRS+F   AG AV+ AQ+V
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEF--NAGEAVTKAQEV 125

Query: 222 VKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMD 281
           VK MLA G+VLGKD  +KAKAFDESH VSA A A+V+ L  RIGLTD I  G EA +  D
Sbjct: 126 VKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTD 185

Query: 282 EKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG 339
           ++YHV  T KSA+ ATGRTAAAAA +VV SSYFS GAL++S AL RAAKAA+DLG+RG
Sbjct: 186 QRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAASDLGTRG 241

[Close]

BLAST of Carg17257 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 202.6 bits (514), Expect = 5.1e-52
Identity = 122/252 (48.41%), Postives = 160/252 (63.49%), Query Frame = 0


Query: 98  MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 157
           M P GY  +VT LSP+ATEKD+  FF+  G +ELVEI     DA TAYV+F+DAY+ + A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 158 CLLSGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMA 217
            LLSGATIVDQ V I+ +G +  E +     +   EED +    +   F S+ G A+++A
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESN-----NLRQEEDYSVTVTRSDAFASSPGEAITVA 120

Query: 218 QDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAK 277
           Q VV+TMLA GYVL KD   KAKA DES + S+  A K+A++S+ +GLT  I +  E  +
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 278 TMDEKYHVLQTTKSAI-----------SATGRTAAAAADTVVRSSYFSRGALFMSDALNR 337
           + DEKYH    TKSA+           + TG+ AAAAA +VV S YF+ GAL+ SDAL R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

Query: 338 AAKAAADLGSRG 339
           AAKAAA +G  G
Sbjct: 241 AAKAAAHIGGGG 247

[Close]

BLAST of Carg17257 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 149.4 bits (376), Expect = 5.1e-36
Identity = 93/241 (38.59%), Postives = 139/241 (57.68%), Query Frame = 0


Query: 104 TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 163
           TV+V+ +S  AT++D+ +FF+FSG I  +E     E    AYV+FKD    ETA LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 164 TIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKT 223
           TIVD  V ++         D+   P      +  P  + +S       + +  A+DVV +
Sbjct: 65  TIVDSSVIVSM------APDYQLSPEALASLE--PKDSNKSP--KAGDSVLRKAEDVVSS 124

Query: 224 MLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGY----EAAKTM 283
           MLA G++LGKD   KAK+ DE HQ+++TA+AKVA    +IG TD I  G     E  + +
Sbjct: 125 MLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREV 184

Query: 284 DEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGL 341
           D+KY V + TKSAI+A  +T + A   ++++ Y   GA +++ A N+ AKAA ++G +  
Sbjct: 185 DQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAK 235

[Close]

BLAST of Carg17257 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 149.1 bits (375), Expect = 6.6e-36
Identity = 89/241 (36.93%), Postives = 137/241 (56.85%), Query Frame = 0


Query: 104 TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 163
           TV+V+ +S +ATE+D+ +FF+FSG I  +E     + +  AYV+FKD    ETA LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 164 TIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKT 223
           TIVD  V +T         D+   P      +    S + S       +    A+DVV  
Sbjct: 65  TIVDSSVTVTM------SPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSG 124

Query: 224 MLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTM 283
           M++ G+VLGKD   KAK+ DE HQ+++TA+A+V     RIG T+ I  G     E  K +
Sbjct: 125 MISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEV 184

Query: 284 DEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGL 341
           D+K+ V + TKSAI+A  +T + A   ++++ Y   GA +++ A NR +KAA ++G +  
Sbjct: 185 DQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAK 239

[Close]

BLAST of Carg17257 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-35
Identity = 96/241 (39.83%), Postives = 137/241 (56.85%), Query Frame = 0


Query: 104 TVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGA 163
           +V+V  LS  ATE DI +FF+FSG +E ++I  S E   +AYV+FK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 164 TIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKT 223
           +I DQ V I       E    +S P+  H E  +          S A + V  A+DVV +
Sbjct: 67  SIADQSVII-------ELAPNYSPPAAPHAETQS----------SGAESVVQKAEDVVSS 126

Query: 224 MLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAG----YEAAKTM 283
           MLA G++LGKD   KAKAFDE H  ++TA A VA L  +IGL+  + AG     E  K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 284 DEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGL 341
           D+ + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+AA ++G +  
Sbjct: 187 DQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK 228

The following BLAST results are available for this feature:

BLAST of Carg17257 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013155.1	3.5e-180	100.00	Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6574098.1	1.0e-179	99.71	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945905.1	7.4e-130	100.00	binding partner of ACD11 1-like [Cucurbita moschata]	[more]
XP_023541311.1	9.1e-128	99.18	binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022968306.1	1.5e-127	98.36	binding partner of ACD11 1-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg17257 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	8.8e-33	39.83	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
Q8GW32	1.5e-24	75.27	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
B8APB5	1.1e-22	69.47	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	1.1e-22	69.47	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
Q9LXG5	1.4e-22	67.78	Transcription factor PRE2 OS=Arabidopsis thaliana OX=3702 GN=PRE2 PE=1 SV=1	[more]

BLAST of Carg17257 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2B1	3.6e-130	100.00	binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450009 PE...	[more]
A0A6J1HUH9	7.5e-128	98.36	binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0KSM6	4.1e-118	90.57	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV...	[more]
A0A5D3CVI0	5.9e-117	89.75	Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BET5	5.9e-117	89.75	binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1	[more]

BLAST of Carg17257 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14340.1	2.9e-79	65.55	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G01210.1	5.1e-52	48.41	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	5.1e-36	38.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	6.6e-36	36.93	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	7.3e-35	39.83	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 98..339
None	No IPR available	PANTHER	PTHR32343:SF26	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 98..339
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 104..174 e-value: 3.1E-4 score: 30.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 107..166 e-value: 1.6E-5 score: 24.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 103..169 score: 9.063978
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 22..63 e-value: 9.0E-6 score: 25.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 7..62 score: 10.435723
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 21..87 e-value: 3.1E-7 score: 32.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 21..81
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 94..181 e-value: 2.5E-7 score: 32.7
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 105..173 e-value: 5.74041E-35 score: 120.628
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 93..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17257-RA	Carg17257-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding