Homology
BLAST of Carg17243 vs. NCBI nr
Match:
KAG7013169.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1067.0 bits (2758), Expect = 5.1e-308
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV
Sbjct: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ
Sbjct: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLMKREGI 240
TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLMKREGI
Sbjct: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLMKREGI 240
Query: 241 APNEITFISVIRGCSVVGLVDEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEAL 300
APNEITFISVIRGCSVVGLVDEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEAL
Sbjct: 241 APNEITFISVIRGCSVVGLVDEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEAL 300
Query: 301 NFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTK 360
NFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTK
Sbjct: 301 NFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTK 360
Query: 361 NWERVSNVRQSMIAERVSKPPGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLK 420
NWERVSNVRQSMIAERVSKPPGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLK
Sbjct: 361 NWERVSNVRQSMIAERVSKPPGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLK 420
Query: 421 LAGYVANTNPVMFDVEEEEKEDALCKHSEKLAIAFGLMSVEEGLPIRVVKNLRVCWDCHD 480
LAGYVANTNPVMFDVEEEEKEDALCKHSEKLAIAFGLMSVEEGLPIRVVKNLRVCWDCHD
Sbjct: 421 LAGYVANTNPVMFDVEEEEKEDALCKHSEKLAIAFGLMSVEEGLPIRVVKNLRVCWDCHD 480
Query: 481 VTKMISKLFNREIIMRDRNRFHHFRDGECSCKDFW 516
VTKMISKLFNREIIMRDRNRFHHFRDGECSCKDFW
Sbjct: 481 VTKMISKLFNREIIMRDRNRFHHFRDGECSCKDFW 515
BLAST of Carg17243 vs. NCBI nr
Match:
KAG6574109.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1024.2 bits (2647), Expect = 3.8e-295
Identity = 515/615 (83.74%), Postives = 515/615 (83.74%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV
Sbjct: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ
Sbjct: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA
Sbjct: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGYTQRGQSREALNLFKLMQMDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLTACTHLGALDQGRWAHAYIERNKIRMTVTLGTALVDMYFKCGNVDKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV
Sbjct: 301 FWQMNEKNVYTWSSAIGGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN
Sbjct: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP
Sbjct: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 540
BLAST of Carg17243 vs. NCBI nr
Match:
XP_023542265.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1019.2 bits (2634), Expect = 1.2e-293
Identity = 513/615 (83.41%), Postives = 513/615 (83.41%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV
Sbjct: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ
Sbjct: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA
Sbjct: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGYAQRGQSREALNLFKLMQMDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLTACTHLGALDQGRWAHAYIERNKIRMTVTLGTALVDMYFKCGNVDKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNGYGEKCLELFSLMK EGIAPNEITFISVIRGCSVVGLV
Sbjct: 301 FWQMNEKNVYTWSSAIGGLAMNGYGEKCLELFSLMKHEGIAPNEITFISVIRGCSVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN
Sbjct: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP
Sbjct: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMW EISKRLKLAGYVANTNPVMFDVEEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWEEISKRLKLAGYVANTNPVMFDVEEEEK 540
BLAST of Carg17243 vs. NCBI nr
Match:
XP_022944963.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita moschata])
HSP 1 Score: 1018.5 bits (2632), Expect = 2.1e-293
Identity = 511/615 (83.09%), Postives = 514/615 (83.58%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV
Sbjct: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ
Sbjct: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACAKCGDTDYARQLFDEMPQRDS+SWNAMIA
Sbjct: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSISWNAMIAGYTQRGQSREALNLFKLMQMDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLTACTHLGALDQGRWAHAYIERNKIRMTVTLGTALVDMYFKCGNVDKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV
Sbjct: 301 FLQMNEKNVYTWSSAIGGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN
Sbjct: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAE VSKP
Sbjct: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAECVSKP 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHPSY+AIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPSYKAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 540
BLAST of Carg17243 vs. NCBI nr
Match:
XP_022968643.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita maxima])
HSP 1 Score: 1012.3 bits (2616), Expect = 1.5e-291
Identity = 508/615 (82.60%), Postives = 512/615 (83.25%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV
Sbjct: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLF LNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFALNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCL+SCYRVFESVQNPDVVCQ
Sbjct: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLSSCYRVFESVQNPDVVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA
Sbjct: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGYAQRGQSREALNLFKLMQMDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLTACTHLGALDQGRWAHAYIERNKIRMTVTLGTALVDMYFKCGNVDKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV
Sbjct: 301 FWQMNEKNVYTWSSAIGGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGRLHFDSMK DYDI+PQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN
Sbjct: 361 DEGRLHFDSMKRDYDIEPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP
Sbjct: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 540
BLAST of Carg17243 vs. ExPASy Swiss-Prot
Match:
Q9FND7 (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)
HSP 1 Score: 681.0 bits (1756), Expect = 1.0e-194
Identity = 329/612 (53.76%), Postives = 414/612 (67.65%), Query Frame = 0
Query: 4 LRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLVYSN 63
+ I KHP I L+DS T KE++QIH +L ++G L D +G FV ++AL + L Y+N
Sbjct: 1 MSRIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYAN 60
Query: 64 QILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRTSAQ 123
QILD+ PTLF LNSMIRA+ KSP P KSF FY RIL S + + PDNYT NFLV+
Sbjct: 61 QILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG 120
Query: 124 LSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTAM 183
L E G VHG + GF+ DPHVQ+GLI +YAE+GCL+SC++VF S+ PD VC+TAM
Sbjct: 121 LRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAM 180
Query: 184 VSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAG-------------------------- 243
V+ACA+CGD +AR+LF+ MP+RD ++WNAMI+G
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 244 ------------------------------------------------------------ 303
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 304 --------------GLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEG 363
GLAMNG+GEKCLELFSLMK++G+ PN +TF+SV+RGCSVVG VDEG
Sbjct: 301 MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 364 RLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACR 423
+ HFDSM++++ I+PQLEHYGC+VDLY RAGRL++A++ I MP+KPHA W +LL+A R
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 424 MYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKPPGC 483
MYKN+ELG +AS+K++ELE NHGAYVLLSNIYAD+ +W+ VS+VRQSM ++ V K PGC
Sbjct: 421 MYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 484 SVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEKEDA 516
SVMEVNGEVHEFFVGDKSHP Y I+ +W +IS+RL+LAGY A+T PVMFD++EEEKEDA
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDA 540
BLAST of Carg17243 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 426.4 bits (1095), Expect = 4.6e-118
Identity = 233/622 (37.46%), Postives = 340/622 (54.66%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLND----RQHLGQFVASIALKNP 60
++TLR KHP + L+ S ++ +LK IH LL L++D + L V P
Sbjct: 6 LNTLR--FKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKP 65
Query: 61 TNLV-YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFN 120
TNL+ Y+ I Q +P LF N +IR +S P K+F FY ++L+S + PDN TF
Sbjct: 66 TNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSR--IWPDNITFP 125
Query: 121 FLVRTSAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNP 180
FL++ S+++ G H + + GF+ D +V++ L+ MYA G + + R+F +
Sbjct: 126 FLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR 185
Query: 181 DVVCQTAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLM 240
DVV T+MV+ KCG + AR++FDEMP R+ +W+ MI G A N EK ++LF M
Sbjct: 186 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI-NGYAKNNCFEKAIDLFEFM 245
Query: 241 KREGIAPNE--------------------------------------------------- 300
KREG+ NE
Sbjct: 246 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 305
Query: 301 --------------------------------------------------ITFISVIRGC 360
+TF +V+ C
Sbjct: 306 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 365
Query: 361 SVVGLVDEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGA 420
S GLV++G +++MK D+ I+P+LEHYGC+VD+ GRAG+L EA NFI M +KP+A
Sbjct: 366 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI 425
Query: 421 WGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIA 480
GALL AC++YKN E+ E L++++ ++ G YVLLSNIYA W+++ ++R M
Sbjct: 426 LGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 485
Query: 481 ERVSKPPGCSVMEVNGEVHEFFVG-DKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMF 516
+ V KPPG S++E++G++++F +G D+ HP I R W EI +++L GY NT F
Sbjct: 486 KLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF 545
BLAST of Carg17243 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 394.8 bits (1013), Expect = 1.5e-108
Identity = 208/579 (35.92%), Postives = 332/579 (57.34%), Query Frame = 0
Query: 13 ITLIDSF--TTLKELKQIHTQLLINGLLNDRQHLGQFVA--SIALKNPTNLVYSNQILDQ 72
I L+ ++ +++ +L+QIH + +G+ LG+ + ++L +P + Y++++ +
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 73 CADP-TLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRTSAQLSAC 132
P +F N++IR Y++ +F Y R ++ + ++ PD +T+ FL++ ++
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLY-REMRVSGLVEPDTHTYPFLIKAVTTMADV 138
Query: 133 EAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTAMV--- 192
G T+H + + GF +VQ+ L+ +YA G + S Y+VF+ + D+V +++
Sbjct: 139 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 198
Query: 193 --------------------------------SACAK----------------------- 252
SACAK
Sbjct: 199 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 258
Query: 253 ------------CGDTDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLMK- 312
CG + A+ LFDEM ++SVSW ++I GLA+NG+G++ +ELF M+
Sbjct: 259 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV-GLAVNGFGKEAIELFKYMES 318
Query: 313 REGIAPNEITFISVIRGCSVVGLVDEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRL 372
EG+ P EITF+ ++ CS G+V EG +F M+ +Y I+P++EH+GCMVDL RAG++
Sbjct: 319 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 378
Query: 373 DEALNFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIY 432
+A +I +MP++P+ W LL AC ++ + +L E A ++++LE + G YVLLSN+Y
Sbjct: 379 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 438
Query: 433 ADTKNWERVSNVRQSMIAERVSKPPGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEIS 492
A + W V +R+ M+ + V K PG S++EV VHEF +GDKSHP +AI E++
Sbjct: 439 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 498
Query: 493 KRLKLAGYVANTNPVMFDVEEEEKEDALCKHSEKLAIAFGLMSVEEGLPIRVVKNLRVCW 516
RL+ GYV + V DVEEEEKE+A+ HSEK+AIAF L+S E PI VVKNLRVC
Sbjct: 499 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558
BLAST of Carg17243 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 392.1 bits (1006), Expect = 9.6e-108
Identity = 215/609 (35.30%), Postives = 319/609 (52.38%), Query Frame = 0
Query: 10 HPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVA-SIALKNPTNLVYSNQILDQ 69
+ T++ + + +ELKQIH ++L GL+ D + +F++ I+ + L Y+ + D
Sbjct: 15 YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 70 CADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDN-YTFNFLVRTSAQLSAC 129
P F N MIR +S S P +S Y R+L S+ +P N YTF L++ + LSA
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSS---APHNAYTFPSLLKACSNLSAF 134
Query: 130 EAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTAMVSAC 189
E +H + K G+E D + + LI YA G + +F+ + PD V +++
Sbjct: 135 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 194
Query: 190 AKCGDTDYARQLFDEMPQRDSVSWNAMIAG------------------------------ 249
K G D A LF +M +++++SW MI+G
Sbjct: 195 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 254
Query: 250 ------------------------------------------------------------ 309
Sbjct: 255 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 314
Query: 310 ----------GLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEGRLHF 369
G A +G+G + + F M++ GI PN ITF +V+ CS GLV+EG+L F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374
Query: 370 DSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACRMYKN 429
SM+ DY++KP +EHYGC+VDL GRAG LDEA FI MP+KP+A WGALL ACR++KN
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434
Query: 430 MELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKPPGCSVME 489
+ELGE L+ ++ + G YV +NI+A K W++ + R+ M + V+K PGCS +
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 494
Query: 490 VNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFD-VEEEEKEDALCK 516
+ G HEF GD+SHP E I+ W + ++L+ GYV ++ D V+++E+E + +
Sbjct: 495 LEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQ 554
BLAST of Carg17243 vs. ExPASy Swiss-Prot
Match:
Q9ZVF4 (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)
HSP 1 Score: 380.9 bits (977), Expect = 2.2e-104
Identity = 216/565 (38.23%), Postives = 303/565 (53.63%), Query Frame = 0
Query: 23 KELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLVYSNQILDQCADPTLFTLNSMIR 82
K+LK+IH +L G L Q + ++ + ++ Y+ Q+ D+ P +F N++ +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG--DMCYARQVFDEMHKPRIFLWNTLFK 84
Query: 83 AYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRTSAQLSACEAGRTVHGALFKHGF 142
Y ++ P +S Y ++ + PD +T+ F+V+ +QL G +H + K+GF
Sbjct: 85 GYVRNQLPFESLLLYKKMRDLG--VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF 144
Query: 143 EFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTA-------------------- 202
V + L+ MY + G L+S +FES+Q D+V A
Sbjct: 145 GCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNK 204
Query: 203 ---------------MVSACA-----------------------------------KCGD 262
M+SAC KCG+
Sbjct: 205 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 264
Query: 263 TDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIR 322
T+ AR LF+EM QR+ VSW+ MI G AMNG + L LF+ M+ EG+ PN +TF+ V+
Sbjct: 265 TEAARVLFEEMKQRNVVSWSTMIV-GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 324
Query: 323 GCSVVGLVDEGRLHFDSM--KSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKP 382
CS GLV+EG+ +F M +D +++P+ EHY CMVDL GR+G L+EA FI MP++P
Sbjct: 325 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 384
Query: 383 HAGAWGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQ 442
G WGALL AC ++++M LG+ + LVE +VLLSNIYA W+ V VR
Sbjct: 385 DTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRS 444
Query: 443 SMIAERVSKPPGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNP 502
M K S +E G++H F GDKSHP +AI EI K+++ GYV +T
Sbjct: 445 KMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCS 504
Query: 503 VMFDVEEEEKEDALCKHSEKLAIAFGLMSVEEGLPIRVVKNLRVCWDCHDVTKMISKLFN 516
V DVE EEKE +L HSEKLAIAFGL+ G PIRV+KNLR C DCH +K +S L +
Sbjct: 505 VFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTS 564
BLAST of Carg17243 vs. ExPASy TrEMBL
Match:
A0A6J1FZH3 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita moschata OX=3662 GN=LOC111449343 PE=3 SV=1)
HSP 1 Score: 1018.5 bits (2632), Expect = 1.0e-293
Identity = 511/615 (83.09%), Postives = 514/615 (83.58%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV
Sbjct: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ
Sbjct: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACAKCGDTDYARQLFDEMPQRDS+SWNAMIA
Sbjct: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSISWNAMIAGYTQRGQSREALNLFKLMQMDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLTACTHLGALDQGRWAHAYIERNKIRMTVTLGTALVDMYFKCGNVDKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV
Sbjct: 301 FLQMNEKNVYTWSSAIGGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN
Sbjct: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAE VSKP
Sbjct: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAECVSKP 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHPSY+AIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPSYKAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 540
BLAST of Carg17243 vs. ExPASy TrEMBL
Match:
A0A6J1HYM9 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita maxima OX=3661 GN=LOC111467805 PE=3 SV=1)
HSP 1 Score: 1012.3 bits (2616), Expect = 7.2e-292
Identity = 508/615 (82.60%), Postives = 512/615 (83.25%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV
Sbjct: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLF LNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFALNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCL+SCYRVFESVQNPDVVCQ
Sbjct: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLSSCYRVFESVQNPDVVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA
Sbjct: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGYAQRGQSREALNLFKLMQMDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLTACTHLGALDQGRWAHAYIERNKIRMTVTLGTALVDMYFKCGNVDKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV
Sbjct: 301 FWQMNEKNVYTWSSAIGGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGRLHFDSMK DYDI+PQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN
Sbjct: 361 DEGRLHFDSMKRDYDIEPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP
Sbjct: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 540
BLAST of Carg17243 vs. ExPASy TrEMBL
Match:
A0A6J1DA54 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica charantia OX=3673 GN=LOC111019070 PE=3 SV=1)
HSP 1 Score: 950.3 bits (2455), Expect = 3.4e-273
Identity = 470/615 (76.42%), Postives = 495/615 (80.49%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTI+LIDSFTTL ELK+IHTQLL NGLL DRQ LGQFVASIALKNPTNL
Sbjct: 1 MSTLRNIAKHPTISLIDSFTTLNELKKIHTQLLFNGLLTDRQLLGQFVASIALKNPTNLA 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCADPTLFTLNSMIRAYS+S TPHKSFQFYNRILQSND+MSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCADPTLFTLNSMIRAYSRSSTPHKSFQFYNRILQSNDLMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
AQLSACEAG TVHGAL KHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESV+ PD+VCQ
Sbjct: 121 CAQLSACEAGPTVHGALIKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVREPDLVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACAKCGDT +AR LFDEMPQRDS+SWNAMIA
Sbjct: 181 TAMVSACAKCGDTGFARDLFDEMPQRDSISWNAMIAGYAQRGQSREALNLFKLMQMDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLTACTHLGALDQGRWAHAYIERNKIRMTVTLGTALVDMYFKCGNVDKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGL+MNGYGEKCLELFSLMK+EG APNEITFIS+IRGCSVVGLV
Sbjct: 301 FWQMNEKNVYTWSSAIGGLSMNGYGEKCLELFSLMKKEGAAPNEITFISIIRGCSVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGRLHFDSMK DY I+PQLEHYGCMVDLYGRAGRLDEALNFIN MP+KPHAGAWGALLN
Sbjct: 361 DEGRLHFDSMKRDYGIEPQLEHYGCMVDLYGRAGRLDEALNFINAMPLKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSM E VSKP
Sbjct: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMKVEGVSKP 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHP+Y+AIE MWG+ISKRLKLAGYVANTNPV+FD+EEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPNYDAIETMWGDISKRLKLAGYVANTNPVLFDIEEEEK 540
BLAST of Carg17243 vs. ExPASy TrEMBL
Match:
A0A1S3BFJ2 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo OX=3656 GN=LOC103489076 PE=3 SV=1)
HSP 1 Score: 898.3 bits (2320), Expect = 1.5e-257
Identity = 448/615 (72.85%), Postives = 481/615 (78.21%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MSTLRNIAKHPTI LIDSF TLKELKQIHTQLLINGL N+RQ LGQFVASIALKNPTNL+
Sbjct: 1 MSTLRNIAKHPTIALIDSFITLKELKQIHTQLLINGLFNNRQLLGQFVASIALKNPTNLL 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSNQILDQCA PTLF LNSMIRAYSKS TPH+SFQFYN+ILQSNDVMSPDNYTFNFLVRT
Sbjct: 61 YSNQILDQCAKPTLFALNSMIRAYSKSLTPHRSFQFYNKILQSNDVMSPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
AQ SACEAG VHGAL KHGFE+DPHV+SGLIFMYAEMGCL+SC+RVFESVQ PD+VCQ
Sbjct: 121 CAQ-SACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMGCLSSCHRVFESVQKPDLVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
T MVSACAKCGD +AR LFD MPQRD VSWNAMIA
Sbjct: 181 TTMVSACAKCGDIGFARNLFDSMPQRDYVSWNAMIAGYAQRGQSREALNLFKLMQVDGVK 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDKALTV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNGYG+KCLELFSLMKREGIAPNEITFISV++GCSVVG V
Sbjct: 301 FWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
DEGR HFDSMK D+ I+P+ EHYGCMVDLYGRAGRL+EALNFINTMP+KPHAGAWGALLN
Sbjct: 361 DEGRSHFDSMKRDHGIEPKHEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
ACRMYKNMELGE ASRKL+E+E KNHGAYVLLSNIYADT NWERVSNVRQSM A +SK
Sbjct: 421 ACRMYKNMELGEFASRKLIEVEGKNHGAYVLLSNIYADTGNWERVSNVRQSMKAGGISKL 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSVMEVNGEVHEFFVGDKSHPSY+AIE MWGEISKRLKLAGYVA+TN V+FD+EEEEK
Sbjct: 481 PGCSVMEVNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEK 540
BLAST of Carg17243 vs. ExPASy TrEMBL
Match:
A0A314YQQ6 (Putative pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14554 PE=3 SV=1)
HSP 1 Score: 819.7 bits (2116), Expect = 6.9e-234
Identity = 405/615 (65.85%), Postives = 463/615 (75.28%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLV 60
MS+LR IAKHPTI+L+DSFTTLKELKQIH+QLL+NGLLND GQFVA+IA++NP+NL
Sbjct: 1 MSSLRCIAKHPTISLVDSFTTLKELKQIHSQLLVNGLLNDPHLSGQFVATIAIRNPSNLG 60
Query: 61 YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRT 120
YSN++LDQC +PTLFT NSMIRAYSKS TP KSF FY+RILQS D PDNYTFNFLVRT
Sbjct: 61 YSNEVLDQCENPTLFTFNSMIRAYSKSSTPSKSFHFYSRILQSRDNFLPDNYTFNFLVRT 120
Query: 121 SAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQ 180
AQL A E G +VH AL K GFE DPHVQSGLIFMYAE+GCL+SC+RVF + PD+VCQ
Sbjct: 121 CAQLLARETGPSVHAALTKRGFENDPHVQSGLIFMYAELGCLHSCHRVFGEIVEPDLVCQ 180
Query: 181 TAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIA------------------------ 240
TAMVSACA+CGD +AR+LFDEMPQRD ++WNAMIA
Sbjct: 181 TAMVSACARCGDVGFARELFDEMPQRDPIAWNAMIAGYAQCGKSREALNLFHLMQMEGVR 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 VNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTVTLGTALIDMYAKCGNMNKAMEV 300
Query: 301 ----------------GGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLV 360
GGLAMNG+GEKCLELFSLM +EG+ PNE+TF+SV+RGC+VVGLV
Sbjct: 301 FWGMKEKNVYTWSSALGGLAMNGFGEKCLELFSLMNKEGVHPNEVTFVSVLRGCTVVGLV 360
Query: 361 DEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLN 420
+EGR HF+SMK Y I+PQLEHYGC+VDLYGRAGRLDEALNFIN MP+KPHAGAWGALLN
Sbjct: 361 EEGRQHFNSMKKLYGIEPQLEHYGCIVDLYGRAGRLDEALNFINCMPMKPHAGAWGALLN 420
Query: 421 ACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKP 480
A RMYKNME+GE+ASRK+V+LEAKNHGAYVLLSNIYAD+K W+ VSNVRQ+M A+ V K
Sbjct: 421 ASRMYKNMEIGELASRKIVKLEAKNHGAYVLLSNIYADSKLWDGVSNVRQTMKAKGVRKL 480
Query: 481 PGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEK 516
PGCSV+EV+GEVHEF VGDKSHP Y IE M GEIS+RLKLAGYVANTNPV+FD+EEEEK
Sbjct: 481 PGCSVLEVDGEVHEFLVGDKSHPRYNEIEAMLGEISRRLKLAGYVANTNPVLFDIEEEEK 540
BLAST of Carg17243 vs. TAIR 10
Match:
AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 681.0 bits (1756), Expect = 7.3e-196
Identity = 329/612 (53.76%), Postives = 414/612 (67.65%), Query Frame = 0
Query: 4 LRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLVYSN 63
+ I KHP I L+DS T KE++QIH +L ++G L D +G FV ++AL + L Y+N
Sbjct: 1 MSRIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYAN 60
Query: 64 QILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRTSAQ 123
QILD+ PTLF LNSMIRA+ KSP P KSF FY RIL S + + PDNYT NFLV+
Sbjct: 61 QILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG 120
Query: 124 LSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTAM 183
L E G VHG + GF+ DPHVQ+GLI +YAE+GCL+SC++VF S+ PD VC+TAM
Sbjct: 121 LRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAM 180
Query: 184 VSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAG-------------------------- 243
V+ACA+CGD +AR+LF+ MP+RD ++WNAMI+G
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 244 ------------------------------------------------------------ 303
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 304 --------------GLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEG 363
GLAMNG+GEKCLELFSLMK++G+ PN +TF+SV+RGCSVVG VDEG
Sbjct: 301 MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 364 RLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACR 423
+ HFDSM++++ I+PQLEHYGC+VDLY RAGRL++A++ I MP+KPHA W +LL+A R
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 424 MYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKPPGC 483
MYKN+ELG +AS+K++ELE NHGAYVLLSNIYAD+ +W+ VS+VRQSM ++ V K PGC
Sbjct: 421 MYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 484 SVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEKEDA 516
SVMEVNGEVHEFFVGDKSHP Y I+ +W +IS+RL+LAGY A+T PVMFD++EEEKEDA
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDA 540
BLAST of Carg17243 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 426.4 bits (1095), Expect = 3.3e-119
Identity = 233/622 (37.46%), Postives = 340/622 (54.66%), Query Frame = 0
Query: 1 MSTLRNIAKHPTITLIDSFTTLKELKQIHTQLLINGLLND----RQHLGQFVASIALKNP 60
++TLR KHP + L+ S ++ +LK IH LL L++D + L V P
Sbjct: 6 LNTLR--FKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKP 65
Query: 61 TNLV-YSNQILDQCADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFN 120
TNL+ Y+ I Q +P LF N +IR +S P K+F FY ++L+S + PDN TF
Sbjct: 66 TNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSR--IWPDNITFP 125
Query: 121 FLVRTSAQLSACEAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNP 180
FL++ S+++ G H + + GF+ D +V++ L+ MYA G + + R+F +
Sbjct: 126 FLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR 185
Query: 181 DVVCQTAMVSACAKCGDTDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLM 240
DVV T+MV+ KCG + AR++FDEMP R+ +W+ MI G A N EK ++LF M
Sbjct: 186 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI-NGYAKNNCFEKAIDLFEFM 245
Query: 241 KREGIAPNE--------------------------------------------------- 300
KREG+ NE
Sbjct: 246 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 305
Query: 301 --------------------------------------------------ITFISVIRGC 360
+TF +V+ C
Sbjct: 306 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 365
Query: 361 SVVGLVDEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGA 420
S GLV++G +++MK D+ I+P+LEHYGC+VD+ GRAG+L EA NFI M +KP+A
Sbjct: 366 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI 425
Query: 421 WGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIA 480
GALL AC++YKN E+ E L++++ ++ G YVLLSNIYA W+++ ++R M
Sbjct: 426 LGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 485
Query: 481 ERVSKPPGCSVMEVNGEVHEFFVG-DKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMF 516
+ V KPPG S++E++G++++F +G D+ HP I R W EI +++L GY NT F
Sbjct: 486 KLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF 545
BLAST of Carg17243 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-109
Identity = 208/579 (35.92%), Postives = 332/579 (57.34%), Query Frame = 0
Query: 13 ITLIDSF--TTLKELKQIHTQLLINGLLNDRQHLGQFVA--SIALKNPTNLVYSNQILDQ 72
I L+ ++ +++ +L+QIH + +G+ LG+ + ++L +P + Y++++ +
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 73 CADP-TLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRTSAQLSAC 132
P +F N++IR Y++ +F Y R ++ + ++ PD +T+ FL++ ++
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLY-REMRVSGLVEPDTHTYPFLIKAVTTMADV 138
Query: 133 EAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTAMV--- 192
G T+H + + GF +VQ+ L+ +YA G + S Y+VF+ + D+V +++
Sbjct: 139 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 198
Query: 193 --------------------------------SACAK----------------------- 252
SACAK
Sbjct: 199 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 258
Query: 253 ------------CGDTDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLMK- 312
CG + A+ LFDEM ++SVSW ++I GLA+NG+G++ +ELF M+
Sbjct: 259 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV-GLAVNGFGKEAIELFKYMES 318
Query: 313 REGIAPNEITFISVIRGCSVVGLVDEGRLHFDSMKSDYDIKPQLEHYGCMVDLYGRAGRL 372
EG+ P EITF+ ++ CS G+V EG +F M+ +Y I+P++EH+GCMVDL RAG++
Sbjct: 319 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 378
Query: 373 DEALNFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIY 432
+A +I +MP++P+ W LL AC ++ + +L E A ++++LE + G YVLLSN+Y
Sbjct: 379 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 438
Query: 433 ADTKNWERVSNVRQSMIAERVSKPPGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEIS 492
A + W V +R+ M+ + V K PG S++EV VHEF +GDKSHP +AI E++
Sbjct: 439 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 498
Query: 493 KRLKLAGYVANTNPVMFDVEEEEKEDALCKHSEKLAIAFGLMSVEEGLPIRVVKNLRVCW 516
RL+ GYV + V DVEEEEKE+A+ HSEK+AIAF L+S E PI VVKNLRVC
Sbjct: 499 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558
BLAST of Carg17243 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 392.1 bits (1006), Expect = 6.8e-109
Identity = 215/609 (35.30%), Postives = 319/609 (52.38%), Query Frame = 0
Query: 10 HPTITLIDSFTTLKELKQIHTQLLINGLLNDRQHLGQFVA-SIALKNPTNLVYSNQILDQ 69
+ T++ + + +ELKQIH ++L GL+ D + +F++ I+ + L Y+ + D
Sbjct: 15 YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 70 CADPTLFTLNSMIRAYSKSPTPHKSFQFYNRILQSNDVMSPDN-YTFNFLVRTSAQLSAC 129
P F N MIR +S S P +S Y R+L S+ +P N YTF L++ + LSA
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSS---APHNAYTFPSLLKACSNLSAF 134
Query: 130 EAGRTVHGALFKHGFEFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTAMVSAC 189
E +H + K G+E D + + LI YA G + +F+ + PD V +++
Sbjct: 135 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 194
Query: 190 AKCGDTDYARQLFDEMPQRDSVSWNAMIAG------------------------------ 249
K G D A LF +M +++++SW MI+G
Sbjct: 195 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 254
Query: 250 ------------------------------------------------------------ 309
Sbjct: 255 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 314
Query: 310 ----------GLAMNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEGRLHF 369
G A +G+G + + F M++ GI PN ITF +V+ CS GLV+EG+L F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374
Query: 370 DSMKSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACRMYKN 429
SM+ DY++KP +EHYGC+VDL GRAG LDEA FI MP+KP+A WGALL ACR++KN
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434
Query: 430 MELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQSMIAERVSKPPGCSVME 489
+ELGE L+ ++ + G YV +NI+A K W++ + R+ M + V+K PGCS +
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 494
Query: 490 VNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNPVMFD-VEEEEKEDALCK 516
+ G HEF GD+SHP E I+ W + ++L+ GYV ++ D V+++E+E + +
Sbjct: 495 LEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQ 554
BLAST of Carg17243 vs. TAIR 10
Match:
AT2G01510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 380.9 bits (977), Expect = 1.6e-105
Identity = 216/565 (38.23%), Postives = 303/565 (53.63%), Query Frame = 0
Query: 23 KELKQIHTQLLINGLLNDRQHLGQFVASIALKNPTNLVYSNQILDQCADPTLFTLNSMIR 82
K+LK+IH +L G L Q + ++ + ++ Y+ Q+ D+ P +F N++ +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG--DMCYARQVFDEMHKPRIFLWNTLFK 84
Query: 83 AYSKSPTPHKSFQFYNRILQSNDVMSPDNYTFNFLVRTSAQLSACEAGRTVHGALFKHGF 142
Y ++ P +S Y ++ + PD +T+ F+V+ +QL G +H + K+GF
Sbjct: 85 GYVRNQLPFESLLLYKKMRDLG--VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF 144
Query: 143 EFDPHVQSGLIFMYAEMGCLNSCYRVFESVQNPDVVCQTA-------------------- 202
V + L+ MY + G L+S +FES+Q D+V A
Sbjct: 145 GCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNK 204
Query: 203 ---------------MVSACA-----------------------------------KCGD 262
M+SAC KCG+
Sbjct: 205 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 264
Query: 263 TDYARQLFDEMPQRDSVSWNAMIAGGLAMNGYGEKCLELFSLMKREGIAPNEITFISVIR 322
T+ AR LF+EM QR+ VSW+ MI G AMNG + L LF+ M+ EG+ PN +TF+ V+
Sbjct: 265 TEAARVLFEEMKQRNVVSWSTMIV-GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 324
Query: 323 GCSVVGLVDEGRLHFDSM--KSDYDIKPQLEHYGCMVDLYGRAGRLDEALNFINTMPIKP 382
CS GLV+EG+ +F M +D +++P+ EHY CMVDL GR+G L+EA FI MP++P
Sbjct: 325 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 384
Query: 383 HAGAWGALLNACRMYKNMELGEVASRKLVELEAKNHGAYVLLSNIYADTKNWERVSNVRQ 442
G WGALL AC ++++M LG+ + LVE +VLLSNIYA W+ V VR
Sbjct: 385 DTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRS 444
Query: 443 SMIAERVSKPPGCSVMEVNGEVHEFFVGDKSHPSYEAIERMWGEISKRLKLAGYVANTNP 502
M K S +E G++H F GDKSHP +AI EI K+++ GYV +T
Sbjct: 445 KMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCS 504
Query: 503 VMFDVEEEEKEDALCKHSEKLAIAFGLMSVEEGLPIRVVKNLRVCWDCHDVTKMISKLFN 516
V DVE EEKE +L HSEKLAIAFGL+ G PIRV+KNLR C DCH +K +S L +
Sbjct: 505 VFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTS 564
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7013169.1 | 5.1e-308 | 100.00 | putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... | [more] |
KAG6574109.1 | 3.8e-295 | 83.74 | putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... | [more] |
XP_023542265.1 | 1.2e-293 | 83.41 | putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita pepo s... | [more] |
XP_022944963.1 | 2.1e-293 | 83.09 | putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita moscha... | [more] |
XP_022968643.1 | 1.5e-291 | 82.60 | putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita maxima... | [more] |
Match Name | E-value | Identity | Description | |
Q9FND7 | 1.0e-194 | 53.76 | Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th... | [more] |
Q9FG16 | 4.6e-118 | 37.46 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
A8MQA3 | 1.5e-108 | 35.92 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 9.6e-108 | 35.30 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9ZVF4 | 2.2e-104 | 38.23 | Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FZH3 | 1.0e-293 | 83.09 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita mosc... | [more] |
A0A6J1HYM9 | 7.2e-292 | 82.60 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita maxi... | [more] |
A0A6J1DA54 | 3.4e-273 | 76.42 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica char... | [more] |
A0A1S3BFJ2 | 1.5e-257 | 72.85 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo O... | [more] |
A0A314YQQ6 | 6.9e-234 | 65.85 | Putative pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nu... | [more] |
Match Name | E-value | Identity | Description | |
AT5G40405.1 | 7.3e-196 | 53.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G06540.1 | 3.3e-119 | 37.46 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21065.1 | 1.1e-109 | 35.92 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 6.8e-109 | 35.30 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G01510.1 | 1.6e-105 | 38.23 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |