Carg17217 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAGAATTCGCCATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCATGCTTTAAGAACTGCTCAAAAAGCTCCTGTCCACGCTCGAGGTTAAGCTTTTGATTATGATCTTACAATGAAGTATTCTTTTGATGACGAACATCATCCACTTTCTATGCATTTTTCTTGTCATGATCTTCAGATGTCATTTGAATTCACCCTGGTTTCATTTCGGATTTCGTTAGTTTTGAAATTGTCTGCTTTGAACAGAGGAACTGAGGCATACAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAACGAGAGACGGAAAGTAAGGTTTCTGCTGAGTGAAGGAATAGAGAGATTGAAGCGTTTAGAGGAGATGTTGGATATGCAG GAGGAGAATTCGCCATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCATGCTTTAAGAACTGCTCAAAAAGCTCCTGTCCACGCTCGAGAGGAACTGAGGCATACAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAACGAGAGACGGAAAGTAAGGTTTCTGCTGAGTGAAGGAATAGAGAGATTGAAGCGTTTAGAGGAGATGTTGGATATGCAG ATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCATGCTTTAAGAACTGCTCAAAAAGCTCCTGTCCACGCTCGAGAGGAACTGAGGCATACAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAACGAGAGACGGAAAGTAAGGTTTCTGCTGAGTGAAGGAATAGAGAGATTGAAGCGTTTAGAGGAGATGTTGGATATGCAG MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERRKVRFLLSEGIERLKRLEEMLDMQ Homology
BLAST of Carg17217 vs. NCBI nr
Match: KAG6608613.1 (hypothetical protein SDJN03_01955, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147.5 bits (371), Expect = 4.8e-32 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg17217 vs. NCBI nr
Match: KAG7037930.1 (hypothetical protein SDJN02_01562, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.5 bits (371), Expect = 4.8e-32 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg17217 vs. NCBI nr
Match: XP_022941069.1 (uncharacterized protein LOC111446466 [Cucurbita moschata]) HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg17217 vs. NCBI nr
Match: XP_023524988.1 (uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo] >XP_023524989.1 uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo] >XP_023524990.1 uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 141.0 bits (354), Expect = 4.5e-30 Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Carg17217 vs. NCBI nr
Match: XP_022936861.1 (uncharacterized protein LOC111443321 [Cucurbita moschata] >XP_022936862.1 uncharacterized protein LOC111443321 [Cucurbita moschata]) HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28 Identity = 71/79 (89.87%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Carg17217 vs. ExPASy TrEMBL
Match: A0A6J1FM54 (uncharacterized protein LOC111446466 OS=Cucurbita moschata OX=3662 GN=LOC111446466 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.8e-32 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg17217 vs. ExPASy TrEMBL
Match: A0A6J1F8N3 (uncharacterized protein LOC111443321 OS=Cucurbita moschata OX=3662 GN=LOC111443321 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.0e-28 Identity = 71/79 (89.87%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Carg17217 vs. ExPASy TrEMBL
Match: A0A6J1IY12 (uncharacterized protein LOC111480962 OS=Cucurbita maxima OX=3661 GN=LOC111480962 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.0e-28 Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Carg17217 vs. ExPASy TrEMBL
Match: A0A6J1IFA5 (uncharacterized protein LOC111476418 OS=Cucurbita maxima OX=3661 GN=LOC111476418 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.6e-27 Identity = 68/79 (86.08%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Carg17217 vs. ExPASy TrEMBL
Match: A0A6J1CHJ1 (uncharacterized protein LOC111011218 OS=Momordica charantia OX=3673 GN=LOC111011218 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.3e-26 Identity = 66/79 (83.54%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Carg17217 vs. TAIR 10
Match: AT1G76065.1 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 105.1 bits (261), Expect = 2.6e-23 Identity = 52/78 (66.67%), Postives = 67/78 (85.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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