Homology
BLAST of Carg17211 vs. NCBI nr
Match:
KAG7037924.1 (La-related protein 1C, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 970.3 bits (2507), Expect = 6.1e-279
Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0
Query: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE
Sbjct: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
Query: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ
Sbjct: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
Query: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM
Sbjct: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
Query: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG
Sbjct: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
Query: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP 300
GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP
Sbjct: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP 300
Query: 301 TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV 360
TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV
Sbjct: 301 TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV 360
Query: 361 PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS
Sbjct: 361 PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
Query: 421 STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVN 480
STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVN
Sbjct: 421 STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVN 480
Query: 481 QDVQTDI 488
QDVQTDI
Sbjct: 481 QDVQTDI 487
BLAST of Carg17211 vs. NCBI nr
Match:
KAG6608607.1 (La-related protein 1C, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 951.4 bits (2458), Expect = 3.0e-273
Identity = 480/487 (98.56%), Postives = 480/487 (98.56%), Query Frame = 0
Query: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE
Sbjct: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
Query: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA GPTIVPPQRQ
Sbjct: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA-------GPTIVPPQRQ 120
Query: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM
Sbjct: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
Query: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG
Sbjct: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
Query: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP 300
GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP
Sbjct: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP 300
Query: 301 TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV 360
TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV
Sbjct: 301 TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV 360
Query: 361 PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS
Sbjct: 361 PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
Query: 421 STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVN 480
STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVN
Sbjct: 421 STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVN 480
Query: 481 QDVQTDI 488
QDVQTDI
Sbjct: 481 QDVQTDI 480
BLAST of Carg17211 vs. NCBI nr
Match:
XP_022941059.1 (la-related protein 1C-like [Cucurbita moschata])
HSP 1 Score: 934.1 bits (2413), Expect = 4.9e-268
Identity = 476/491 (96.95%), Postives = 476/491 (96.95%), Query Frame = 0
Query: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE
Sbjct: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
Query: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA GPTIVPPQRQ
Sbjct: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA-------GPTIVPPQRQ 120
Query: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYR----PPPPPPPPFPVFQIP 180
ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYR PPPPPPPPFPVFQIP
Sbjct: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPPPPPFPVFQIP 180
Query: 181 CSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQ 240
CSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPN FPRGNLALHPRGNGHYQ
Sbjct: 181 CSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNCFPRGNLALHPRGNGHYQ 240
Query: 241 NNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEF 300
NNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEF
Sbjct: 241 NNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEF 300
Query: 301 VYVPTWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDD 360
VYVPTWPLETYRGMPFMPPPSVY SAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDD
Sbjct: 301 VYVPTWPLETYRGMPFMPPPSVYYSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDD 360
Query: 361 QGWVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRT 420
QGWVPISLIAGFSMVKNLTTNI WIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRT
Sbjct: 361 QGWVPISLIAGFSMVKNLTTNIQWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRT 420
Query: 421 DLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTN 480
DLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSS LTN
Sbjct: 421 DLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSQLTN 480
Query: 481 GEVNQDVQTDI 488
GEVNQDVQTDI
Sbjct: 481 GEVNQDVQTDI 484
BLAST of Carg17211 vs. NCBI nr
Match:
XP_023525275.1 (la-related protein 1C-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 915.6 bits (2365), Expect = 1.8e-262
Identity = 468/489 (95.71%), Postives = 469/489 (95.91%), Query Frame = 0
Query: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSS STVSAPE
Sbjct: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSFSTVSAPE 60
Query: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
TPETPAPAPTSDFFASSEEG PVMGADSWPDLAESAKASPKLA GPTIVPPQRQ
Sbjct: 61 TPETPAPAPTSDFFASSEEGAPVMGADSWPDLAESAKASPKLA-------GPTIVPPQRQ 120
Query: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYR--PPPPPPPPFPVFQIPCS 180
ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYR PPPPPPPPFPVFQIPCS
Sbjct: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPPPFPVFQIPCS 180
Query: 181 MMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNN 240
MMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGN ALHPRGNGHYQNN
Sbjct: 181 MMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNFALHPRGNGHYQNN 240
Query: 241 RGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVY 300
RGGKQRDQDRGVYSNARDAHFRQHRP TRGFMRPTPP TAQFPQPVIPYGNPMPPPEFVY
Sbjct: 241 RGGKQRDQDRGVYSNARDAHFRQHRPSTRGFMRPTPPYTAQFPQPVIPYGNPMPPPEFVY 300
Query: 301 VPTWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQG 360
VPTWPLETYRG PFMPPPSVY SAVDPTLSASLVNQIEYYFSDTNLITDGYLRC+MDDQG
Sbjct: 301 VPTWPLETYRGTPFMPPPSVYYSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCRMDDQG 360
Query: 361 WVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDL 420
WVPISLIA FSMVKNLTTNI WIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDL
Sbjct: 361 WVPISLIASFSMVKNLTTNIQWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDL 420
Query: 421 TSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGE 480
TSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESA SS LTNGE
Sbjct: 421 TSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESAGSSQLTNGE 480
Query: 481 VNQDVQTDI 488
VNQDVQTDI
Sbjct: 481 VNQDVQTDI 482
BLAST of Carg17211 vs. NCBI nr
Match:
XP_022982500.1 (la-related protein 1B-like [Cucurbita maxima])
HSP 1 Score: 903.3 bits (2333), Expect = 9.2e-259
Identity = 462/488 (94.67%), Postives = 466/488 (95.49%), Query Frame = 0
Query: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSS STVSAPE
Sbjct: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSFSTVSAPE 60
Query: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA GPTIVPPQRQ
Sbjct: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA-------GPTIVPPQRQ 120
Query: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM
Sbjct: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
Query: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG
Sbjct: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
Query: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP 300
GKQRDQDRGVYSNARDAHFRQHRPPTRG M PTPP TAQFPQPV+PYGNPM PPEFVYVP
Sbjct: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGLMPPTPPYTAQFPQPVLPYGNPMHPPEFVYVP 300
Query: 301 TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV 360
TWPLETYRGMPFM PPSVY SAVDPTLSASLV QIEYYF DTNLI DGYLRC+MDDQGWV
Sbjct: 301 TWPLETYRGMPFMLPPSVYYSAVDPTLSASLVKQIEYYFCDTNLIMDGYLRCRMDDQGWV 360
Query: 361 PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
PISLIA FS VKNLTTNI WIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS
Sbjct: 361 PISLIASFSRVKNLTTNIQWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
Query: 421 STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQ-SSESADSSHLTNGEV 480
STPSGSDHDSLATSFQGVR+DEGINQSTPSDTDPRNT+STTKIQ SSESADSS LTNGEV
Sbjct: 421 STPSGSDHDSLATSFQGVRLDEGINQSTPSDTDPRNTKSTTKIQSSSESADSSQLTNGEV 480
Query: 481 NQDVQTDI 488
NQDVQTDI
Sbjct: 481 NQDVQTDI 481
BLAST of Carg17211 vs. ExPASy Swiss-Prot
Match:
Q94K80 (La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 8.1e-24
Identity = 156/536 (29.10%), Postives = 226/536 (42.16%), Query Frame = 0
Query: 5 NHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPETP-- 64
NH SP+ + + P + W +VRGE E I+ + + SS AP P
Sbjct: 22 NHGSPTASVAQSPRR---PSRQVSSPWTQIVRGESEPIAAAAAVAGPSSPQSRAPIEPIA 81
Query: 65 ETPAPAPTSDFFA------------------------------SSEEGGPVMGADSWPDL 124
APT+ + E GPVMGA SWP L
Sbjct: 82 SVSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKRPSNGASEVGPVMGASSWPAL 141
Query: 125 AESAKA--------SPKLAVDSPSKSGPTIVPPQRQATNNAKSDPSLKH---------PV 184
+E+ KA S K D PS S + P Q NA S P+ K P
Sbjct: 142 SETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANA-SVPAPKQAGRANPNPTPN 201
Query: 185 VARQRS-SRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMMPAIPDPSHGEPLFR 244
+RQRS +R+G GS+ G ++ P + PSH P R
Sbjct: 202 HSRQRSFKQRNGASGSANGTVSQ------------------PSAQGSFTELPSH-NPSPR 261
Query: 245 SNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRGGKQRDQDRGVYS-- 304
N+ GF Q + ++ P+ + NG++ + GG+ R+Q+ G +
Sbjct: 262 GQNQK----NGFASQNHGGTENPS-----QRDSYRNQNGNHHQSHGGR-RNQEHGNQNWT 321
Query: 305 -----NARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVPTWPLET- 364
N R+ + + R T F+R P QP+ + P P + PT ++
Sbjct: 322 FQRSFNGREGNAQSQR-GTPAFVRHPSPTV----QPIPQFMAAQPFPSHIPFPTELAQSS 381
Query: 365 -YRGMPFMPP----PSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVP 424
Y MP+M P P + DP L L QI+YYFSD NLITD YLR M+++G+VP
Sbjct: 382 YYPRMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVP 441
Query: 425 ISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTSS 474
+ ++AGF V LT NI I+E+L+ S +EVQ + IRKR+ W+ W+ LR + T S
Sbjct: 442 LRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWV-----LRRNPTGS 501
BLAST of Carg17211 vs. ExPASy Swiss-Prot
Match:
Q8RWR2 (La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2)
HSP 1 Score: 104.0 bits (258), Expect = 4.9e-21
Identity = 126/424 (29.72%), Postives = 196/424 (46.23%), Query Frame = 0
Query: 43 SQSPLSSSSSSSTVSAPETPETPAPAPTSDFFASSEEGGPVMG-ADSWPDLAESAKA--- 102
S SP + ++SS +A + P P+S+ SS + GPVMG A+SWP L+ SA++
Sbjct: 56 SVSPPTGNNSSDYDNADKKPPPVWNMPSSN---SSSDVGPVMGAAESWPALSLSARSSSI 115
Query: 103 -SPKLAVDSPSKSGPTIVPPQRQATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPAR 162
SP L P G + P QAT+N ++ + V A +S + +S P R
Sbjct: 116 KSPSLDASKPFPDGSSSSIPPPQATSNTSTNANAGSSVSA---TSSENSAVNNSQRKPFR 175
Query: 163 GFYRPPPPPPPPFPVFQIPCSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYP 222
S + S+ PL + H + G NF +
Sbjct: 176 R---------------NNNTSSSSTSSNVSNAAPLNTRDQNHSQRGGGSFGSGNFRNSQR 235
Query: 223 NFFPRGNLALHPRGNG-HYQNNRGGKQRDQDRGVYSN--ARDAHFRQHRPPTRGFMRPT- 282
N N + +PRG G H+ N R + +Q + N RD H + R G +RP
Sbjct: 236 N----RNSSSYPRGEGLHHGNRRNYEHGNQSGFSHRNYSGRDMHLQPQRGV--GMIRPQM 295
Query: 283 -------PPCTAQF---PQPVIPYGNPMPPPEF---VYVPTWPLETYRGM--PFMPPPSV 342
P +AQ+ PQ + YG P+ P++ V++P P G+ PF P +
Sbjct: 296 LMGPPSFPASSAQYMAAPQ-LGSYGGPIIYPDYAQHVFMP-HPSPDPMGLVGPF-PLQPM 355
Query: 343 YNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNI 402
Y D L ++ Q+EYYFS NL D +LR QM+D+GWVP+ +IA F + LT NI
Sbjct: 356 YFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNI 415
Query: 403 LWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDHDSLATSFQGV 443
I+E+LR+S V+E+Q +R+R +W K+++ R + S++ SL + + +
Sbjct: 416 QTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSR---SGPAAGASNNASLVSQIESM 446
BLAST of Carg17211 vs. ExPASy Swiss-Prot
Match:
Q940X9 (La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 2.1e-19
Identity = 141/442 (31.90%), Postives = 190/442 (42.99%), Query Frame = 0
Query: 64 TPAPAPTSDFFASSEEGGPVMGADSWPDLAESA-----KASPKLAVDSPSKSGPTIVP-P 123
T +P T D PVMGA SWP LA++A K P A PSK+ PT +P P
Sbjct: 31 TTSPVETID--------APVMGAHSWPALADAAQQPRPKNPPAPAPAPPSKNIPTSIPIP 90
Query: 124 QRQATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPP---------PP 183
T AKS + ++ G S GP PPPPP PP
Sbjct: 91 TPAVTGQAKSKGG------GKANPGHKNPSGRHSKPGPRSNQNGPPPPPYLVHAVPYHPP 150
Query: 184 PF-PVFQIPCSM---MPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGN 243
PF P+ +P + P P P + P+ P +G Q S P P
Sbjct: 151 PFPPMVPLPHAAGPDFPYAPYPPYPVPV------PPVTESGNEKQVQ-ASPLPPVLPA-- 210
Query: 244 LALHPRGN--GHYQNNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTA---- 303
P+G+ + + RG R+ +G A +F RPP FM P P
Sbjct: 211 ----PQGDPGKPWPHQRGFDPRNMPQG----AGPRNF--GRPP---FMGPAPGFLVGPGP 270
Query: 304 QFPQPVIPYGNPMPPPEFV---YVPTW-PLETYRGMPFMPPPSVYNSAVDPTLSASLVNQ 363
FP PV Y P PPP + Y P + P +G P + P + L ++ Q
Sbjct: 271 GFPGPV--YYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKL-------DLRDRVLKQ 330
Query: 364 IEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQ 423
+EYYFSD NL D YL MD++GWVP +IAGF VK +T ++ +I+ +L S +EVQ
Sbjct: 331 VEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQ 390
Query: 424 DNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDP 477
++IRKR++W WI S + ++ T D DS + + G N PS
Sbjct: 391 GDQIRKRDKWSDWIPAS---KKSTSAETIGDGDKDSPKS------ITSGDNFGNPSKGSS 415
BLAST of Carg17211 vs. ExPASy Swiss-Prot
Match:
Q659C4 (La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2)
HSP 1 Score: 83.6 bits (205), Expect = 6.9e-15
Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 327 LSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNILWIIESLR 386
L + QIEYYFS NL D +LR +MD+QG++PISLIAGF V+ LTTN+ I+E+L+
Sbjct: 215 LKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALK 274
Query: 387 TSTVLEVQDNRIRKRNEWKKWII 410
ST +E+ D ++RK+ E +KW I
Sbjct: 275 DSTEVEIVDEKMRKKIEPEKWPI 297
BLAST of Carg17211 vs. ExPASy Swiss-Prot
Match:
Q6PKG0 (La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2)
HSP 1 Score: 72.8 bits (177), Expect = 1.2e-11
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 0
Query: 334 QIEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEV 393
QIEYYFS NL D +LR +MD G++PI+LIA F V+ LTT+I I +L+ S V+E+
Sbjct: 410 QIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEI 469
Query: 394 QDNRIRKRNEWKKW 408
D ++R+R E +KW
Sbjct: 470 VDEKVRRREEPEKW 483
BLAST of Carg17211 vs. ExPASy TrEMBL
Match:
A0A6J1FM41 (la-related protein 1C-like OS=Cucurbita moschata OX=3662 GN=LOC111446461 PE=4 SV=1)
HSP 1 Score: 934.1 bits (2413), Expect = 2.4e-268
Identity = 476/491 (96.95%), Postives = 476/491 (96.95%), Query Frame = 0
Query: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE
Sbjct: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
Query: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA GPTIVPPQRQ
Sbjct: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA-------GPTIVPPQRQ 120
Query: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYR----PPPPPPPPFPVFQIP 180
ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYR PPPPPPPPFPVFQIP
Sbjct: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPPPPPFPVFQIP 180
Query: 181 CSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQ 240
CSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPN FPRGNLALHPRGNGHYQ
Sbjct: 181 CSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNCFPRGNLALHPRGNGHYQ 240
Query: 241 NNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEF 300
NNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEF
Sbjct: 241 NNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEF 300
Query: 301 VYVPTWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDD 360
VYVPTWPLETYRGMPFMPPPSVY SAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDD
Sbjct: 301 VYVPTWPLETYRGMPFMPPPSVYYSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDD 360
Query: 361 QGWVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRT 420
QGWVPISLIAGFSMVKNLTTNI WIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRT
Sbjct: 361 QGWVPISLIAGFSMVKNLTTNIQWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRT 420
Query: 421 DLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTN 480
DLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSS LTN
Sbjct: 421 DLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSQLTN 480
Query: 481 GEVNQDVQTDI 488
GEVNQDVQTDI
Sbjct: 481 GEVNQDVQTDI 484
BLAST of Carg17211 vs. ExPASy TrEMBL
Match:
A0A6J1J2U4 (la-related protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111481303 PE=4 SV=1)
HSP 1 Score: 903.3 bits (2333), Expect = 4.5e-259
Identity = 462/488 (94.67%), Postives = 466/488 (95.49%), Query Frame = 0
Query: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPE 60
MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSS STVSAPE
Sbjct: 1 MATVNHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSFSTVSAPE 60
Query: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLAVDSPSKSGPTIVPPQRQ 120
TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA GPTIVPPQRQ
Sbjct: 61 TPETPAPAPTSDFFASSEEGGPVMGADSWPDLAESAKASPKLA-------GPTIVPPQRQ 120
Query: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM
Sbjct: 121 ATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMM 180
Query: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG
Sbjct: 181 PAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRG 240
Query: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVP 300
GKQRDQDRGVYSNARDAHFRQHRPPTRG M PTPP TAQFPQPV+PYGNPM PPEFVYVP
Sbjct: 241 GKQRDQDRGVYSNARDAHFRQHRPPTRGLMPPTPPYTAQFPQPVLPYGNPMHPPEFVYVP 300
Query: 301 TWPLETYRGMPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWV 360
TWPLETYRGMPFM PPSVY SAVDPTLSASLV QIEYYF DTNLI DGYLRC+MDDQGWV
Sbjct: 301 TWPLETYRGMPFMLPPSVYYSAVDPTLSASLVKQIEYYFCDTNLIMDGYLRCRMDDQGWV 360
Query: 361 PISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
PISLIA FS VKNLTTNI WIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS
Sbjct: 361 PISLIASFSRVKNLTTNIQWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTS 420
Query: 421 STPSGSDHDSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQ-SSESADSSHLTNGEV 480
STPSGSDHDSLATSFQGVR+DEGINQSTPSDTDPRNT+STTKIQ SSESADSS LTNGEV
Sbjct: 421 STPSGSDHDSLATSFQGVRLDEGINQSTPSDTDPRNTKSTTKIQSSSESADSSQLTNGEV 480
Query: 481 NQDVQTDI 488
NQDVQTDI
Sbjct: 481 NQDVQTDI 481
BLAST of Carg17211 vs. ExPASy TrEMBL
Match:
A0A0A0LH68 (HTH La-type RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G873810 PE=4 SV=1)
HSP 1 Score: 611.3 bits (1575), Expect = 3.5e-171
Identity = 353/532 (66.35%), Postives = 384/532 (72.18%), Query Frame = 0
Query: 5 NHRSPSPTSFKGDNT--YEFPPKNHLCAWAAVVRGEPELIS---QSPLSSSSSSSTVSAP 64
NHRSPS TS GDNT EF KN WA VVRGEPE IS QS LSSSSSS + A
Sbjct: 10 NHRSPSGTSLAGDNTNSSEFRRKNLQSPWAQVVRGEPESISPVDQSQLSSSSSSLSSLAV 69
Query: 65 ETPETPAPA-PTSDFFASSE------------------------EGGPVMGADSWPDLAE 124
ETPAPA P SD F SSE EGG VMGADSWP LAE
Sbjct: 70 SATETPAPASPPSDNFTSSENCDANDGNAASKKQAWNKPTNGVVEGGSVMGADSWPALAE 129
Query: 125 SAKASPKLAVDSPSK----------SGPTIVPPQRQATNNAKSDPSLKHPVVARQRSSRR 184
SA+ASPKL VDSP K GP VPPQRQATNNAKS+P+LK+PVVAR+ S R
Sbjct: 130 SARASPKLTVDSPPKVTVEVAVPPSQGPINVPPQRQATNNAKSNPTLKNPVVARRSSRRG 189
Query: 185 SGGGGSSMGGPARGFYR----PPPPPPPPFPVFQIP----CSMMPAIPDPSHGEPLFRSN 244
GGGGSS+GGP G+YR PPPPPPPPFPVFQ+ C+M+PAIPDPS GEPLFRS
Sbjct: 190 GGGGGSSVGGPRGGYYRPPPPPPPPPPPPFPVFQVSPNSYCNMIPAIPDPSSGEPLFRSP 249
Query: 245 NRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRGGKQRDQDRGVYSNARD 304
N PRA+AGFVPQ NF +D+ NFFPRGN LHPRG+ HY NNRGGK R QDRG+Y NARD
Sbjct: 250 NWDPRAVAGFVPQLNFGTDHRNFFPRGNFPLHPRGDSHYHNNRGGK-RGQDRGIYFNARD 309
Query: 305 AHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVPTWPLETYR-GMPFMPP 364
AHF+QHRP TRGFMRP PP T QFPQ V P+ NPM PEFVYVPT PLE YR G+PFMP
Sbjct: 310 AHFQQHRPHTRGFMRPLPPFTGQFPQGVRPHLNPMAHPEFVYVPTLPLEAYRGGLPFMPR 369
Query: 365 PSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLT 424
P++ VDPTLSAS+V QIEYYFSD NL+ D YLR QMDDQGWVPISLIA F MV +LT
Sbjct: 370 PAMNYPTVDPTLSASIVKQIEYYFSDGNLVKDDYLRSQMDDQGWVPISLIATFPMVLSLT 429
Query: 425 TNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDHDSLATSF 484
NI WI+ESLRTST +EVQD +IR+RNEWKKW SN RTDL SS SGS HDSLATSF
Sbjct: 430 NNIQWIVESLRTSTEVEVQDYKIRRRNEWKKWTTKSNWFRTDLVSSASSGSTHDSLATSF 489
Query: 485 QGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVNQDVQTDI 488
Q VRVDEG NQS +DTDP N E TT++QSSES D S LTNGE NQDVQTDI
Sbjct: 490 QRVRVDEGTNQSMTNDTDPHNAERTTELQSSESGDCSQLTNGEANQDVQTDI 540
BLAST of Carg17211 vs. ExPASy TrEMBL
Match:
A0A5D3E7C8 (La-related protein 1C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007870 PE=4 SV=1)
HSP 1 Score: 599.7 bits (1545), Expect = 1.1e-167
Identity = 355/539 (65.86%), Postives = 386/539 (71.61%), Query Frame = 0
Query: 5 NHRSPSPTSFKGDNT--YEFPPKNHLCAWAAVVRGEPELIS---QSPLSSSSSSSTVSAP 64
N RSPS TSF GDNT EF KN WA VVRGEPE IS QS LSSSSSS + A
Sbjct: 10 NRRSPSGTSFTGDNTNSSEFRRKNLQSPWAQVVRGEPESISPVDQSQLSSSSSSLSSLAV 69
Query: 65 ETPETPAPA-PTSDFFASSE--------------------------EGGPVMGADSWPDL 124
ETPAPA P SD F SSE EGG VMGADSWP L
Sbjct: 70 SATETPAPASPPSDNFTSSENCDTNDGNATAASKKQAWNKPTNGVVEGGSVMGADSWPAL 129
Query: 125 AESAKASPKLAVDSPSK----------SGPTIVPPQRQATNNAKSDPSLKHPVVARQRSS 184
AESA+ASPKL VDSP K GP VPPQRQATNNAKS+P+LK+PVV R RSS
Sbjct: 130 AESARASPKLTVDSPPKVTVEVAVPPSQGPINVPPQRQATNNAKSNPTLKNPVVPRLRSS 189
Query: 185 RR-SGGGGSSMGGPAR-GFYR-----PPPPPPPPFPVFQIP----CSMMPAIPDPSHGEP 244
RR GGGGSS+GGPAR GFYR PPPPPPPPFP+FQ+P C+M+PAIPDPS GEP
Sbjct: 190 RRGGGGGGSSVGGPARGGFYRPPPPPPPPPPPPPFPLFQVPPNSYCNMIPAIPDPSSGEP 249
Query: 245 LFRSNNRH--PRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRGGKQRDQDRG 304
FRS N + PRA+AGFVPQ NF +D+ NFFPRG+LA HPR +GHY NNRGGK R QDRG
Sbjct: 250 PFRSLNPNWDPRAVAGFVPQLNFGTDHRNFFPRGHLAFHPRVDGHYHNNRGGK-RGQDRG 309
Query: 305 VYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVPTWPLETYRG 364
+Y NARDAHF+QHRP TRGFMRP PP QFPQ V P+ NPM PEFVYVPT PLE YRG
Sbjct: 310 IYPNARDAHFQQHRPHTRGFMRPLPPFAGQFPQGVRPHVNPMAHPEFVYVPTLPLEAYRG 369
Query: 365 -MPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGF 424
MPFMP P++ VDP LSAS++ QIEYYFSD NL+ D YLR QMDDQGWVPISLIA F
Sbjct: 370 SMPFMPRPAMNYPTVDPILSASILKQIEYYFSDGNLVKDDYLRSQMDDQGWVPISLIATF 429
Query: 425 SMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDH 484
MV +LT NI WIIESLR ST +EVQDN+IR+RNEWKKW SN RTDL SS SGS H
Sbjct: 430 PMVLSLTNNIQWIIESLRASTEVEVQDNKIRRRNEWKKWTTKSNWFRTDLVSSATSGSSH 489
Query: 485 DSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVNQDVQTDI 488
DSLATSFQ VRVDEG NQS +D DP N E TT++QSSES D S LTNGE NQDVQTDI
Sbjct: 490 DSLATSFQRVRVDEGTNQSMTNDNDPHNAERTTELQSSESGDCSKLTNGEANQDVQTDI 547
BLAST of Carg17211 vs. ExPASy TrEMBL
Match:
A0A1S3CRB5 (la-related protein 1C-like OS=Cucumis melo OX=3656 GN=LOC103503862 PE=4 SV=1)
HSP 1 Score: 599.7 bits (1545), Expect = 1.1e-167
Identity = 355/539 (65.86%), Postives = 386/539 (71.61%), Query Frame = 0
Query: 5 NHRSPSPTSFKGDNT--YEFPPKNHLCAWAAVVRGEPELIS---QSPLSSSSSSSTVSAP 64
N RSPS TSF GDNT EF KN WA VVRGEPE IS QS LSSSSSS + A
Sbjct: 10 NRRSPSGTSFTGDNTNSSEFRRKNLQSPWAQVVRGEPESISPVDQSQLSSSSSSLSSLAV 69
Query: 65 ETPETPAPA-PTSDFFASSE--------------------------EGGPVMGADSWPDL 124
ETPAPA P SD F SSE EGG VMGADSWP L
Sbjct: 70 SATETPAPASPPSDNFTSSENCDTNDGNATAASKKQAWNKPTNGVVEGGSVMGADSWPAL 129
Query: 125 AESAKASPKLAVDSPSK----------SGPTIVPPQRQATNNAKSDPSLKHPVVARQRSS 184
AESA+ASPKL VDSP K GP VPPQRQATNNAKS+P+LK+PVV R RSS
Sbjct: 130 AESARASPKLTVDSPPKVTVEVAVPPSQGPINVPPQRQATNNAKSNPTLKNPVVPRLRSS 189
Query: 185 RR-SGGGGSSMGGPAR-GFYR-----PPPPPPPPFPVFQIP----CSMMPAIPDPSHGEP 244
RR GGGGSS+GGPAR GFYR PPPPPPPPFP+FQ+P C+M+PAIPDPS GEP
Sbjct: 190 RRGGGGGGSSVGGPARGGFYRPPPPPPPPPPPPPFPLFQVPPNSYCNMIPAIPDPSSGEP 249
Query: 245 LFRSNNRH--PRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRGGKQRDQDRG 304
FRS N + PRA+AGFVPQ NF +D+ NFFPRG+LA HPR +GHY NNRGGK R QDRG
Sbjct: 250 PFRSLNPNWDPRAVAGFVPQLNFGTDHRNFFPRGHLAFHPRVDGHYHNNRGGK-RGQDRG 309
Query: 305 VYSNARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVPTWPLETYRG 364
+Y NARDAHF+QHRP TRGFMRP PP QFPQ V P+ NPM PEFVYVPT PLE YRG
Sbjct: 310 IYPNARDAHFQQHRPHTRGFMRPLPPFAGQFPQGVRPHVNPMAHPEFVYVPTLPLEAYRG 369
Query: 365 -MPFMPPPSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGF 424
MPFMP P++ VDP LSAS++ QIEYYFSD NL+ D YLR QMDDQGWVPISLIA F
Sbjct: 370 SMPFMPRPAMNYPTVDPILSASILKQIEYYFSDGNLVKDDYLRSQMDDQGWVPISLIATF 429
Query: 425 SMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDH 484
MV +LT NI WIIESLR ST +EVQDN+IR+RNEWKKW SN RTDL SS SGS H
Sbjct: 430 PMVLSLTNNIQWIIESLRASTEVEVQDNKIRRRNEWKKWTTKSNWFRTDLVSSATSGSSH 489
Query: 485 DSLATSFQGVRVDEGINQSTPSDTDPRNTESTTKIQSSESADSSHLTNGEVNQDVQTDI 488
DSLATSFQ VRVDEG NQS +D DP N E TT++QSSES D S LTNGE NQDVQTDI
Sbjct: 490 DSLATSFQRVRVDEGTNQSMTNDNDPHNAERTTELQSSESGDCSKLTNGEANQDVQTDI 547
BLAST of Carg17211 vs. TAIR 10
Match:
AT4G35890.1 (winged-helix DNA-binding transcription factor family protein )
HSP 1 Score: 113.2 bits (282), Expect = 5.8e-25
Identity = 156/536 (29.10%), Postives = 226/536 (42.16%), Query Frame = 0
Query: 5 NHRSPSPTSFKGDNTYEFPPKNHLCAWAAVVRGEPELISQSPLSSSSSSSTVSAPETP-- 64
NH SP+ + + P + W +VRGE E I+ + + SS AP P
Sbjct: 22 NHGSPTASVAQSPRR---PSRQVSSPWTQIVRGESEPIAAAAAVAGPSSPQSRAPIEPIA 81
Query: 65 ETPAPAPTSDFFA------------------------------SSEEGGPVMGADSWPDL 124
APT+ + E GPVMGA SWP L
Sbjct: 82 SVSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKRPSNGASEVGPVMGASSWPAL 141
Query: 125 AESAKA--------SPKLAVDSPSKSGPTIVPPQRQATNNAKSDPSLKH---------PV 184
+E+ KA S K D PS S + P Q NA S P+ K P
Sbjct: 142 SETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANA-SVPAPKQAGRANPNPTPN 201
Query: 185 VARQRS-SRRSGGGGSSMGGPARGFYRPPPPPPPPFPVFQIPCSMMPAIPDPSHGEPLFR 244
+RQRS +R+G GS+ G ++ P + PSH P R
Sbjct: 202 HSRQRSFKQRNGASGSANGTVSQ------------------PSAQGSFTELPSH-NPSPR 261
Query: 245 SNNRHPRAIAGFVPQTNFVSDYPNFFPRGNLALHPRGNGHYQNNRGGKQRDQDRGVYS-- 304
N+ GF Q + ++ P+ + NG++ + GG+ R+Q+ G +
Sbjct: 262 GQNQK----NGFASQNHGGTENPS-----QRDSYRNQNGNHHQSHGGR-RNQEHGNQNWT 321
Query: 305 -----NARDAHFRQHRPPTRGFMRPTPPCTAQFPQPVIPYGNPMPPPEFVYVPTWPLET- 364
N R+ + + R T F+R P QP+ + P P + PT ++
Sbjct: 322 FQRSFNGREGNAQSQR-GTPAFVRHPSPTV----QPIPQFMAAQPFPSHIPFPTELAQSS 381
Query: 365 -YRGMPFMPP----PSVYNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVP 424
Y MP+M P P + DP L L QI+YYFSD NLITD YLR M+++G+VP
Sbjct: 382 YYPRMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVP 441
Query: 425 ISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTSS 474
+ ++AGF V LT NI I+E+L+ S +EVQ + IRKR+ W+ W+ LR + T S
Sbjct: 442 LRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWV-----LRRNPTGS 501
BLAST of Carg17211 vs. TAIR 10
Match:
AT5G66100.1 (winged-helix DNA-binding transcription factor family protein )
HSP 1 Score: 104.0 bits (258), Expect = 3.5e-22
Identity = 126/424 (29.72%), Postives = 196/424 (46.23%), Query Frame = 0
Query: 43 SQSPLSSSSSSSTVSAPETPETPAPAPTSDFFASSEEGGPVMG-ADSWPDLAESAKA--- 102
S SP + ++SS +A + P P+S+ SS + GPVMG A+SWP L+ SA++
Sbjct: 57 SVSPPTGNNSSDYDNADKKPPPVWNMPSSN---SSSDVGPVMGAAESWPALSLSARSSSI 116
Query: 103 -SPKLAVDSPSKSGPTIVPPQRQATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPAR 162
SP L P G + P QAT+N ++ + V A +S + +S P R
Sbjct: 117 KSPSLDASKPFPDGSSSSIPPPQATSNTSTNANAGSSVSA---TSSENSAVNNSQRKPFR 176
Query: 163 GFYRPPPPPPPPFPVFQIPCSMMPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYP 222
S + S+ PL + H + G NF +
Sbjct: 177 R---------------NNNTSSSSTSSNVSNAAPLNTRDQNHSQRGGGSFGSGNFRNSQR 236
Query: 223 NFFPRGNLALHPRGNG-HYQNNRGGKQRDQDRGVYSN--ARDAHFRQHRPPTRGFMRPT- 282
N N + +PRG G H+ N R + +Q + N RD H + R G +RP
Sbjct: 237 N----RNSSSYPRGEGLHHGNRRNYEHGNQSGFSHRNYSGRDMHLQPQRGV--GMIRPQM 296
Query: 283 -------PPCTAQF---PQPVIPYGNPMPPPEF---VYVPTWPLETYRGM--PFMPPPSV 342
P +AQ+ PQ + YG P+ P++ V++P P G+ PF P +
Sbjct: 297 LMGPPSFPASSAQYMAAPQ-LGSYGGPIIYPDYAQHVFMP-HPSPDPMGLVGPF-PLQPM 356
Query: 343 YNSAVDPTLSASLVNQIEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNI 402
Y D L ++ Q+EYYFS NL D +LR QM+D+GWVP+ +IA F + LT NI
Sbjct: 357 YFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNI 416
Query: 403 LWIIESLRTSTVLEVQDNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDHDSLATSFQGV 443
I+E+LR+S V+E+Q +R+R +W K+++ R + S++ SL + + +
Sbjct: 417 QTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSR---SGPAAGASNNASLVSQIESM 447
BLAST of Carg17211 vs. TAIR 10
Match:
AT5G21160.1 (LA RNA-binding protein )
HSP 1 Score: 98.6 bits (244), Expect = 1.5e-20
Identity = 141/442 (31.90%), Postives = 190/442 (42.99%), Query Frame = 0
Query: 64 TPAPAPTSDFFASSEEGGPVMGADSWPDLAESA-----KASPKLAVDSPSKSGPTIVP-P 123
T +P T D PVMGA SWP LA++A K P A PSK+ PT +P P
Sbjct: 31 TTSPVETID--------APVMGAHSWPALADAAQQPRPKNPPAPAPAPPSKNIPTSIPIP 90
Query: 124 QRQATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPP---------PP 183
T AKS + ++ G S GP PPPPP PP
Sbjct: 91 TPAVTGQAKSKGG------GKANPGHKNPSGRHSKPGPRSNQNGPPPPPYLVHAVPYHPP 150
Query: 184 PF-PVFQIPCSM---MPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGN 243
PF P+ +P + P P P + P+ P +G Q S P P
Sbjct: 151 PFPPMVPLPHAAGPDFPYAPYPPYPVPV------PPVTESGNEKQVQ-ASPLPPVLPA-- 210
Query: 244 LALHPRGN--GHYQNNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTA---- 303
P+G+ + + RG R+ +G A +F RPP FM P P
Sbjct: 211 ----PQGDPGKPWPHQRGFDPRNMPQG----AGPRNF--GRPP---FMGPAPGFLVGPGP 270
Query: 304 QFPQPVIPYGNPMPPPEFV---YVPTW-PLETYRGMPFMPPPSVYNSAVDPTLSASLVNQ 363
FP PV Y P PPP + Y P + P +G P + P + L ++ Q
Sbjct: 271 GFPGPV--YYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKL-------DLRDRVLKQ 330
Query: 364 IEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQ 423
+EYYFSD NL D YL MD++GWVP +IAGF VK +T ++ +I+ +L S +EVQ
Sbjct: 331 VEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQ 390
Query: 424 DNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDP 477
++IRKR++W WI S + ++ T D DS + + G N PS
Sbjct: 391 GDQIRKRDKWSDWIPAS---KKSTSAETIGDGDKDSPKS------ITSGDNFGNPSKGSS 415
BLAST of Carg17211 vs. TAIR 10
Match:
AT5G21160.3 (LA RNA-binding protein )
HSP 1 Score: 98.6 bits (244), Expect = 1.5e-20
Identity = 141/442 (31.90%), Postives = 190/442 (42.99%), Query Frame = 0
Query: 64 TPAPAPTSDFFASSEEGGPVMGADSWPDLAESA-----KASPKLAVDSPSKSGPTIVP-P 123
T +P T D PVMGA SWP LA++A K P A PSK+ PT +P P
Sbjct: 31 TTSPVETID--------APVMGAHSWPALADAAQQPRPKNPPAPAPAPPSKNIPTSIPIP 90
Query: 124 QRQATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPP---------PP 183
T AKS + ++ G S GP PPPPP PP
Sbjct: 91 TPAVTGQAKSKGG------GKANPGHKNPSGRHSKPGPRSNQNGPPPPPYLVHAVPYHPP 150
Query: 184 PF-PVFQIPCSM---MPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGN 243
PF P+ +P + P P P + P+ P +G Q S P P
Sbjct: 151 PFPPMVPLPHAAGPDFPYAPYPPYPVPV------PPVTESGNEKQVQ-ASPLPPVLPA-- 210
Query: 244 LALHPRGN--GHYQNNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTA---- 303
P+G+ + + RG R+ +G A +F RPP FM P P
Sbjct: 211 ----PQGDPGKPWPHQRGFDPRNMPQG----AGPRNF--GRPP---FMGPAPGFLVGPGP 270
Query: 304 QFPQPVIPYGNPMPPPEFV---YVPTW-PLETYRGMPFMPPPSVYNSAVDPTLSASLVNQ 363
FP PV Y P PPP + Y P + P +G P + P + L ++ Q
Sbjct: 271 GFPGPV--YYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKL-------DLRDRVLKQ 330
Query: 364 IEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQ 423
+EYYFSD NL D YL MD++GWVP +IAGF VK +T ++ +I+ +L S +EVQ
Sbjct: 331 VEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQ 390
Query: 424 DNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDP 477
++IRKR++W WI S + ++ T D DS + + G N PS
Sbjct: 391 GDQIRKRDKWSDWIPAS---KKSTSAETIGDGDKDSPKS------ITSGDNFGNPSKGSS 415
BLAST of Carg17211 vs. TAIR 10
Match:
AT5G21160.2 (LA RNA-binding protein )
HSP 1 Score: 98.6 bits (244), Expect = 1.5e-20
Identity = 141/442 (31.90%), Postives = 190/442 (42.99%), Query Frame = 0
Query: 64 TPAPAPTSDFFASSEEGGPVMGADSWPDLAESA-----KASPKLAVDSPSKSGPTIVP-P 123
T +P T D PVMGA SWP LA++A K P A PSK+ PT +P P
Sbjct: 31 TTSPVETID--------APVMGAHSWPALADAAQQPRPKNPPAPAPAPPSKNIPTSIPIP 90
Query: 124 QRQATNNAKSDPSLKHPVVARQRSSRRSGGGGSSMGGPARGFYRPPPPP---------PP 183
T AKS + ++ G S GP PPPPP PP
Sbjct: 91 TPAVTGQAKSKGG------GKANPGHKNPSGRHSKPGPRSNQNGPPPPPYLVHAVPYHPP 150
Query: 184 PF-PVFQIPCSM---MPAIPDPSHGEPLFRSNNRHPRAIAGFVPQTNFVSDYPNFFPRGN 243
PF P+ +P + P P P + P+ P +G Q S P P
Sbjct: 151 PFPPMVPLPHAAGPDFPYAPYPPYPVPV------PPVTESGNEKQVQ-ASPLPPVLPA-- 210
Query: 244 LALHPRGN--GHYQNNRGGKQRDQDRGVYSNARDAHFRQHRPPTRGFMRPTPPCTA---- 303
P+G+ + + RG R+ +G A +F RPP FM P P
Sbjct: 211 ----PQGDPGKPWPHQRGFDPRNMPQG----AGPRNF--GRPP---FMGPAPGFLVGPGP 270
Query: 304 QFPQPVIPYGNPMPPPEFV---YVPTW-PLETYRGMPFMPPPSVYNSAVDPTLSASLVNQ 363
FP PV Y P PPP + Y P + P +G P + P + L ++ Q
Sbjct: 271 GFPGPV--YYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKL-------DLRDRVLKQ 330
Query: 364 IEYYFSDTNLITDGYLRCQMDDQGWVPISLIAGFSMVKNLTTNILWIIESLRTSTVLEVQ 423
+EYYFSD NL D YL MD++GWVP +IAGF VK +T ++ +I+ +L S +EVQ
Sbjct: 331 VEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQ 390
Query: 424 DNRIRKRNEWKKWIINSNQLRTDLTSSTPSGSDHDSLATSFQGVRVDEGINQSTPSDTDP 477
++IRKR++W WI S + ++ T D DS + + G N PS
Sbjct: 391 GDQIRKRDKWSDWIPAS---KKSTSAETIGDGDKDSPKS------ITSGDNFGNPSKGSS 415
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7037924.1 | 6.1e-279 | 100.00 | La-related protein 1C, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6608607.1 | 3.0e-273 | 98.56 | La-related protein 1C, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022941059.1 | 4.9e-268 | 96.95 | la-related protein 1C-like [Cucurbita moschata] | [more] |
XP_023525275.1 | 1.8e-262 | 95.71 | la-related protein 1C-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022982500.1 | 9.2e-259 | 94.67 | la-related protein 1B-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q94K80 | 8.1e-24 | 29.10 | La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1 | [more] |
Q8RWR2 | 4.9e-21 | 29.72 | La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2 | [more] |
Q940X9 | 2.1e-19 | 31.90 | La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1 | [more] |
Q659C4 | 6.9e-15 | 51.81 | La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2 | [more] |
Q6PKG0 | 1.2e-11 | 50.00 | La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FM41 | 2.4e-268 | 96.95 | la-related protein 1C-like OS=Cucurbita moschata OX=3662 GN=LOC111446461 PE=4 SV... | [more] |
A0A6J1J2U4 | 4.5e-259 | 94.67 | la-related protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111481303 PE=4 SV=1 | [more] |
A0A0A0LH68 | 3.5e-171 | 66.35 | HTH La-type RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=... | [more] |
A0A5D3E7C8 | 1.1e-167 | 65.86 | La-related protein 1C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
A0A1S3CRB5 | 1.1e-167 | 65.86 | la-related protein 1C-like OS=Cucumis melo OX=3656 GN=LOC103503862 PE=4 SV=1 | [more] |