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Carg17191 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGATGGAAACTCAAGTGTTTGAAACAAACACAAAGTCCAGATTTAAACGAATTTGTGTGTTCTGTGGTAGCAGCCCCGGCAAGAAGCCGAGCTATCAACTCGGTGCTCTTCAACTAGCTCAGCAACTGGTACGTCGTGGTTGCTTTAACTTTAAGTTGATAGATTACGATAAATCTAGAGAAGTATTAATGAAAGTACAGGTGGAAAGAAACATTGACTTGGTTTATGGAGGAGGCAGCATCGGCCTGATGGGTTTAGTGTCCCAAGCTGTGCATGATGGCGGTTGCCACGTGTTAGGGTAACTTTTCTTTACACTGGACATCAATTTATGGTTTTAACAAGATAGTGAGATTAACAAAACAGAGGCGATGATTTGGGTTTTGGTTTCAGTGTGATTCCAAGGACGCTGATGTTAAGAGAGGTAAATTAGTTATTGAACAAAATATGGATAGGATAGTTCTGAGATTTTAACGCTGATGTTAAGAAGTCATATTTTCAGCTGACAGGAGAAACTGTGGGAGAAGTGAGGCCTGTGTCGGGCATGCACCAACGAAAAGCAGAGATGGCTAAACAAGCGGACGCGTTCATTGCCCTGCCAGGTCGCTTTCCTTATGATTATCCTCATCCTTGAATCTGTCGGGTGTCCCTCTATTACAGAGTTTAGTGGGTATTATGATGTGTGCTTGGCAGGTGGGTATGGCACTTTAGAGGAGCTTCTGGAGGTCATAACTTGGGCTCAACTTGGAATCCACCACAAACCCGTGTGATAACCAACACTTTTGTTTTTGTTTCCTTTTAAAGTTTACTTTAACTTCAATCAGTGGACGCTGAATTTGATTGTATTGTATGATATAGGTGGGGCTGTTGAACGTGGACGGCTATTACAATGCGCTTCTTTCCTTCATTGACAAAGCCGTGGCAGAAGGTTTTATCACACCAGCTGCCCGTAACATTATTGTTTCCGCTCAGACTGCCCACGAACTCATGTGCAAGCTTGAGGTACATCTCCTATATCGCCTACACGTGGGGAGGATCTACTACTTGGGTCCCCACAGGAATTAGCCTACTCCAAATGGAACTGAGATTGGTCTTCTTTTTTTTTTGTTTCACTTTGACTAAGGATTACAAACCAAAGCACTGCGGAGTTGCCGGCTGGGTATGATCGGTAGATGGACAAACAAATAGGTTTCATATCAAAATCGGACATTGCCCCCTGACTTAGTCTCATTTATTTCGACACTCGAAAGAATAAAGAAATAAAAAGAAAGAAACAAAATTCTGTTTGTGCTTTCTGCTTTTGACACCAGAGTAGTTGTTTCTAGTTAGCTGTATTAGGATTTGTGTAGAAATATGTCTTGAGATCGTGTTTTGATTGGAATGATTATGTATGTATGGATCACTAGCAAGAAATCGTTGATTTTTGAATACCTAAGTTCTACATGCATTGCACAAGGTCATGCCCGTCATGAATGTAAAGTGGCGAATAAGGAATTTGGTATCAACCCATCACCGAGAATGTCCTATGTTCCAAAATTCAATGCTACCCAACACTTACCACGGAAGCTAGTCTTCGTGATTCAGACGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGAGGCCAAAGAGTTTGAACTAGGTAAGAATCCTTATCATACATAGATTTTATTTCTCAATTCGTAGATCTATTCAACTCACTTTAGCTGGGTAACTAAGATGAGATTAACTTGTAAATATGTCTGTAGATGGTGGAACCAAATGATCTATAATTGAAGGGAATTCGCTCATACTATATTCGGAGTGGCCTTTATGATTAAAGTACTGATTTTGATGGAAAGTACCTATTTTATAAGTGGCATCATCTCATACACCTTTTAATTTGGAATCAATTAAAATGAAACGCGGTGGTTGCGACCACTAAGTCCAAATTTGGAGTGGACGGAAGAATTTTGCAAGTCCATCCAAAAACTGGCATCTTTTTAGCCTGCCACTATGAGAGCAGCATCAATGGACTCGACTTTAAGACTTTTGAAATACAAAATTATTAGCCCTCCAA AAACGATGGAAACTCAAGTGTTTGAAACAAACACAAAGTCCAGATTTAAACGAATTTGTGTGTTCTGTGGTAGCAGCCCCGGCAAGAAGCCGAGCTATCAACTCGGTGCTCTTCAACTAGCTCAGCAACTGGTACGTCGTGGTTGCTTTAACTTTAAGTTGATAGATTACGATAAATCTAGAGAAGTATTAATGAAAGTACAGGTGGAAAGAAACATTGACTTGGTTTATGGAGGAGGCAGCATCGGCCTGATGGGTTTAGTGTCCCAAGCTGTGCATGATGGCGGTTGCCACGTGTTAGGTGTGATTCCAAGGACGCTGATGTTAAGAGAGCTGACAGGAGAAACTGTGGGAGAAGTGAGGCCTGTGTCGGGCATGCACCAACGAAAAGCAGAGATGGCTAAACAAGCGGACGCGTTCATTGCCCTGCCAGGTGGGTATGGCACTTTAGAGGAGCTTCTGGAGGTCATAACTTGGGCTCAACTTGGAATCCACCACAAACCCGTGGGGCTGTTGAACGTGGACGGCTATTACAATGCGCTTCTTTCCTTCATTGACAAAGCCGTGGCAGAAGGTTTTATCACACCAGCTGCCCGTAACATTATTGTTTCCGCTCAGACTGCCCACGAACTCATGTGCAAGCTTGAGAAATCGTTGATTTTTGAATACCTAAGTTCTACATGCATTGCACAAGGTCATGCCCGTCATGAATGTAAAGTGGCGAATAAGGAATTTGGTATCAACCCATCACCGAGAATGTCCTATGTTCCAAAATTCAATGCTACCCAACACTTACCACGGAAGCTAGTCTTCGTGATTCAGACGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGAGGCCAAAGAGTTTGAACTAGATGGTGGAACCAAATGATCTATAATTGAAGGGAATTCGCTCATACTATATTCGGAGTGGCCTTTATGATTAAAGTACTGATTTTGATGGAAAGTACCTATTTTATAAGTGGCATCATCTCATACACCTTTTAATTTGGAATCAATTAAAATGAAACGCGGTGGTTGCGACCACTAAGTCCAAATTTGGAGTGGACGGAAGAATTTTGCAAGTCCATCCAAAAACTGGCATCTTTTTAGCCTGCCACTATGAGAGCAGCATCAATGGACTCGACTTTAAGACTTTTGAAATACAAAATTATTAGCCCTCCAA ATGGAAACTCAAGTGTTTGAAACAAACACAAAGTCCAGATTTAAACGAATTTGTGTGTTCTGTGGTAGCAGCCCCGGCAAGAAGCCGAGCTATCAACTCGGTGCTCTTCAACTAGCTCAGCAACTGGTACGTCGTGGTTGCTTTAACTTTAAGTTGATAGATTACGATAAATCTAGAGAAGTATTAATGAAAGTACAGGTGGAAAGAAACATTGACTTGGTTTATGGAGGAGGCAGCATCGGCCTGATGGGTTTAGTGTCCCAAGCTGTGCATGATGGCGGTTGCCACGTGTTAGGTGTGATTCCAAGGACGCTGATGTTAAGAGAGCTGACAGGAGAAACTGTGGGAGAAGTGAGGCCTGTGTCGGGCATGCACCAACGAAAAGCAGAGATGGCTAAACAAGCGGACGCGTTCATTGCCCTGCCAGGTGGGTATGGCACTTTAGAGGAGCTTCTGGAGGTCATAACTTGGGCTCAACTTGGAATCCACCACAAACCCGTGGGGCTGTTGAACGTGGACGGCTATTACAATGCGCTTCTTTCCTTCATTGACAAAGCCGTGGCAGAAGGTTTTATCACACCAGCTGCCCGTAACATTATTGTTTCCGCTCAGACTGCCCACGAACTCATGTGCAAGCTTGAGAAATCGTTGATTTTTGAATACCTAAGTTCTACATGCATTGCACAAGGTCATGCCCGTCATGAATGTAAAGTGGCGAATAAGGAATTTGGTATCAACCCATCACCGAGAATGTCCTATGTTCCAAAATTCAATGCTACCCAACACTTACCACGGAAGCTAGTCTTCGTGATTCAGACGTTGCTGCTGCTGACATGCAAACCATTGAAGATGGTCCTCGAGGCCAAAGAGTTTGAACTAGATGGTGGAACCAAATGA METQVFETNTKSRFKRICVFCGSSPGKKPSYQLGALQLAQQLVRRGCFNFKLIDYDKSREVLMKVQVERNIDLVYGGGSIGLMGLVSQAVHDGGCHVLGVIPRTLMLRELTGETVGEVRPVSGMHQRKAEMAKQADAFIALPGGYGTLEELLEVITWAQLGIHHKPVGLLNVDGYYNALLSFIDKAVAEGFITPAARNIIVSAQTAHELMCKLEKSLIFEYLSSTCIAQGHARHECKVANKEFGINPSPRMSYVPKFNATQHLPRKLVFVIQTLLLLTCKPLKMVLEAKEFELDGGTK Homology
BLAST of Carg17191 vs. NCBI nr
Match: KAG7037905.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 600.5 bits (1547), Expect = 7.8e-168 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of Carg17191 vs. NCBI nr
Match: XP_023525368.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucurbita pepo subsp. pepo] >KAG6608588.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 367.9 bits (943), Expect = 8.5e-98 Identity = 189/214 (88.32%), Postives = 189/214 (88.32%), Query Frame = 0
BLAST of Carg17191 vs. NCBI nr
Match: XP_022980902.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucurbita maxima]) HSP 1 Score: 367.9 bits (943), Expect = 8.5e-98 Identity = 189/214 (88.32%), Postives = 189/214 (88.32%), Query Frame = 0
BLAST of Carg17191 vs. NCBI nr
Match: XP_022940429.1 (probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 [Cucurbita moschata]) HSP 1 Score: 358.6 bits (919), Expect = 5.2e-95 Identity = 188/223 (84.30%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of Carg17191 vs. NCBI nr
Match: XP_008466494.1 (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7-like isoform X1 [Cucumis melo]) HSP 1 Score: 345.1 bits (884), Expect = 5.9e-91 Identity = 183/231 (79.22%), Postives = 189/231 (81.82%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 285.4 bits (729), Expect = 7.3e-76 Identity = 148/206 (71.84%), Postives = 163/206 (79.13%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75 Identity = 149/209 (71.29%), Postives = 163/209 (77.99%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy Swiss-Prot
Match: Q8H7U8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL3 PE=2 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 3.1e-74 Identity = 145/205 (70.73%), Postives = 163/205 (79.51%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 6.8e-74 Identity = 148/209 (70.81%), Postives = 161/209 (77.03%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy Swiss-Prot
Match: Q84M85 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL5 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL5 PE=2 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.5e-73 Identity = 139/206 (67.48%), Postives = 162/206 (78.64%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy TrEMBL
Match: A0A6J1ISJ1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111480218 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 4.1e-98 Identity = 189/214 (88.32%), Postives = 189/214 (88.32%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy TrEMBL
Match: A0A6J1FK34 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111446042 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 2.5e-95 Identity = 188/223 (84.30%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy TrEMBL
Match: A0A1S3CSP0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103503886 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.9e-91 Identity = 183/231 (79.22%), Postives = 189/231 (81.82%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy TrEMBL
Match: A0A0A0LGH1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G872060 PE=3 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 7.1e-90 Identity = 183/232 (78.88%), Postives = 189/232 (81.47%), Query Frame = 0
BLAST of Carg17191 vs. ExPASy TrEMBL
Match: A0A6J1C1J3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111006568 PE=3 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 1.1e-87 Identity = 174/218 (79.82%), Postives = 179/218 (82.11%), Query Frame = 0
BLAST of Carg17191 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 285.4 bits (729), Expect = 5.2e-77 Identity = 148/206 (71.84%), Postives = 163/206 (79.13%), Query Frame = 0
BLAST of Carg17191 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 284.6 bits (727), Expect = 8.9e-77 Identity = 149/209 (71.29%), Postives = 163/209 (77.99%), Query Frame = 0
BLAST of Carg17191 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 278.9 bits (712), Expect = 4.9e-75 Identity = 148/209 (70.81%), Postives = 161/209 (77.03%), Query Frame = 0
BLAST of Carg17191 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 270.8 bits (691), Expect = 1.3e-72 Identity = 151/248 (60.89%), Postives = 179/248 (72.18%), Query Frame = 0
BLAST of Carg17191 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 268.9 bits (686), Expect = 5.0e-72 Identity = 148/233 (63.52%), Postives = 162/233 (69.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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