Carg17163 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17163
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AP-4 complex subunit mu-like
Location	Carg_Chr01: 12773826 .. 12779524 (-)
RNA-Seq Expression	Carg17163
Synteny	Carg17163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGGAGTTCTTTGGGGAGTCTCCCATCCGATTGAGTTCCTTCGCGCGCTGCTGTGTCTGCTAATCGGAGACGATACTGATTTTTTTAAGCTCGATACGGTTGCTCAGGTTTGGCAATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTGTAATTTTCTTTCCAGATCTGATGTGTTTTTGTTAAGCATGAAATTAGTCTCCAATTTGATACGACGAATAAAATTCTTCAATATGTCGTGGTTATTGTTAAATGTATGCAGATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTGTAGGTATTTTCATGTGTTGACTGCGTGGTAGTCTACTGGCATATTGTCTTCTGCATGCTCACTGGATTGTTAGAATTTCGACTGCAGATCCAAGTTAAAAGCGATTTTTAGACTTATTTTTATGAGTTCTTCAATAGGCAGTCGTGTTCCCTACTTTCTGCATCGTAGTTAGTATGCAATCTACGATATCTTCGTGCATTTTTTCCCTGCATTCCACCAGGTTTTGTTATAGGCTATTCGCCGTGTCTCTCAGATGAGGCATTGATTACGATTTATGCTAAAATAATTCTTTGATACCATTTTAGGATTTTTTTTTTTTTTAATATGCAGTAATGACCTTTACCTACTGTTTATGGCGATACAAAAGTATGATATCTTTTTTCATCTTTCCTGCATTCCACCAGCTTGTGGAGGACACAGGCTTTGTGTGTCGGAATAGGAGAATGAGTGCAATGTATGCTGAAATAATTGTTATAAAAAACGTATTAGTTTTATGCATGAAAATAATGGATTATGTGTTTATCAGTGTCATTTATTGACTTCTCTTCTCAACGAGAGATTTTGATCATACGGTTTCTTTCTCATATATTTTAATTTTTATATTTTTTTTGGTGTCATTTTCCCTTGGCTGCAGAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGTAAGTTTGTTATTCTTTCCCTATCCTTTCTCAGGATTTAATGAATCAACTGCTCAATTTGCTCTACCTTATTGCGCCGCAAATCGTATGTTTTAAGCCCAGTGGTTAAGTTTTTCTTTTAAAACCCTCATGATCTGTTATATGGTTTTCAATTGGAATTAGGATTTTGGTTATGTACAAACAACATCAACTGAGGTTCTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGGTATTTCTTTTACTATGCAACAATCCTTTTCAAATTTTATGCTTTAAATGTTTCTTGAGTGGACTTTCTTTACTTGTCTCTTGAAGCAAGGTAACAAACGGATGCCAGGTACGGCTGTCACTAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTCACATTCAGCTCAAGTGTGAGTATTTTTTTGTTATTTCTGTACAGCTCCAGTCCTTCTTTGTTATCTTCAATTCGGTTAAACTTATCAGAGAATTCACTTGAAAATTTTTAATGTGCATAACGCGGAGCTGTTGACTGGTATTTTAAATTTTTTATGCATCAGCTTTTGATGCCTGCTTAGTTTTCACTTCTGGAATTGGAATGAGCAAGGAGACATTTTTCATGTGGTTTTCTCTATCTCATGTACAAAGTAAATATTAGAAAGATAATCCTTCATTTTTTCTCGACTATTCATTGCCTTCTCCAAATTTTTGGGTGAATAAAAGATACACCCTTCATAATAACTGAGTACGTCTTTGGTGGCCCCTGCTTGGACTTAAATGATTTGGTTTGCATGGAGGAGTAAGTCAGTAGTTGGTTAGTTTACCTTGATAGAGCAGTTGTCAGCACAATGTGTCAGTGATTGAGGCAGACTATTACTTCTTAAAACTTAAGTGTGGGAGTCAATAGAAAAGCATTGGGAGAATTCAAGAATTCCATGATTTCATTGTAAACTTTCTGAACTAATAGAAATGTTTTGTGAGCCTTATTGTTTTACTCATTCATTGACGACATGAGAACTACATGTTTGGAGAAAATGAGAGAGAAGACAACTTCTGAGAATTGATATTCCTTAACTTGAATTTGGTGACTATAATCTTCTTTGATGCATCTTGTTAGATGGTATCATGCTTTTAGCTTATAATTCTACAATTGGCAAGCATCTCATCATATTAGGATAAGGGAAATTATCTAACAACTATAACTCATGCTAAGTGTATATATATTTTTTGGGTCGATGTTTCCATAATGGATCATTTTATGTTGACTACAGGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGGTAAGGTTCTGCATATTTATTGGTTCTGTATTCTTTTAGGGCATATTTATTGGTTCTGCATATTTATTGATTATTGGTTCTGTAAGGTTCTACAGGAGCTAGAAAAAACTAAGGGTTGAATTTTTTTAAAAAATTTTATTTTCTGATTGTGAAAGTTCTATAGCTTTTGTTTGTTAATAATAAAGGTGAATTCTATCATCTTCTATGAGTTTTCTTTATTGTTCGTTCTTCTATATGCGTATATGGTTTTATGTGTGTGTTTTTAATATGATTTGCTCTCCCGTCATTGTGTTCTATCTACACAAAGATATATGATGGATGATTATAGGAGTTGTATAAATTACCGTCTCCATATTTCAATTTAAGACTTATTTTAGTTATTGATATTTTAAGTGACTGATGTCGATTTGCACCAAAACTTTTGTAATTTTCTTCTATAGAAATAGTAAAATTAAGTTGATAAAGGCTTTTTATCTTTGTGTTCAATTAAAGGAGACATGGTTGGTATCTCCCCTAACGGGGTTGGGAACTGTCCTTCCCTTCTAACACACATAAAGTTTATATCTATTTTGTATATTTATTTTGTTTGATTGTTTTCTATTTTCTCAACCTATTACATTTTCCTTGGACTAATCCAGCTTCAACCTCTGGTGACAGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTTAGTAAAAAAGGACGCAAGTTATTTGCTTGAGTTTGCTTGTGAATTGAGACTCATTCTTGATTCTATTTTAAAAGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGTTGAAATAACTTCCCTCCTGTATGTTAACATTCTTTATGATTTTTTTTATTGAAAAGGACTGTTTAATTTTCAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGGTGTGTGTAGTGTAGCATAGAAAAAAGTCATTCGTAAATGGTTGTCATTTTTTGTTGGGTTGGGTTTGGTTTGGTTTGGTTTGGCTTGAACTCATTTCTTAGAGCTTAGTCATATAATCTCCGTTGCTTTAATCATTCTTCTATTTATGACATTTTCAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGGCAAGACACTTCCTATAAACTTCCTCTTAAATGAGCTCTGTTTATCAATAATTTTCAAGAGCATGAGTGGCAAGTTACTCGGTGCATATGATTTGTCTCTTTACTTCCTTTACTTGATTAAGGAATTATCAGTTTATACACTAGTCAACTAATACTTTGTAAGTTAGCTCCTTTCCTAGAATTACTTATTTTTATGGCTTGTCTTATGCATGTGCCGATTGTAGAGCCTTTACATAACCCTTTTGGAATACTAGAGTATTTCCCTCTTCCTTTTCATTAATTCAAAAAAATTATTTGTTTCCTTTAAAAAAATATATTTTAACTGAAGGTGTTAGGTATCAAGTCTGCATTATTTGGTTATCGACAAGCCAAAGAGAGCTATGAGCTCAATTACGCTCACTAGGCCAATTTGGAAGGATCACCTTCTCTCCCTTTTCAAAACCCTCACAATTTCTCCTTGCCTCACTCGTGCATCACTTCCCCCATACCAAGTACCCCGGAGAATCCAACATAACTAACTTCCCTTTCTTTTACCCTTTTCACTATTACTCTCACTTTCTCTCTAACTATTGGGAGCATAACAGAATGCCAATCTCGTGTTGTCTTGTCATTAGATGTTTGCATTAATCTTGTTGTTACTAATAGGCGTTACATGGCAGATTGTTGGTGGATCTGAACATACTTTGCGTGCAAGGCTCACATTTTCACAAGAATCACATGGTAAATTTTGTACATTGACGAACAAGATATTTTTCTCAGGAAATAAATATATGAATTAAAAATATATTTTCTATGGCAGGAAACATCGTGAAAGAATCTGGACCTGTTAGTATGACCTTCACAATTCCAATGTACAACGCTTCAAAGCTCCAGGCATGTTATCTGAGCAGAATCGAGTTATCTCCTTTGATAATCGATTATAAGATGCTAACATCTTCCCTTTTACTTGCAGGTTAAGTACTTGCAGATTGCAAAGAAGTCCAACACCTATAATCCGTATAGGTGGGTGAGATATGTGACACAAGCAAATTCATACGTGGCTCGATTGTGAATGTAAACTTCCTCGATCTTGATTCTCTTATTTACTATTTTGACCTGCCTGTCAGTAAATACTTGTCGTGGGTTTGGTTATCTGAGGCTGTGTTTAGTGCATATGCGAACCCTTTTCTTTTTTTTTTTTATCCTTTTGTAGAGTGAGTATGAATACCCACACCCATCAAATGCATCTCAGGATAACTGTAGTTACAATGTTCATAGTGGAATGCTTAAAGTTATCAATATTGCACTGTAAAATAATACATTAAGCCTGAGTGGCTCCATATTCTGAGTAGTAGGACATGTCGGTGCTCTGGAATTTACTTTGATATATTTGATTTGAACTTTTGAATTTGCTGATGATCAAGTATTAGAATATTAAGTTTTGAGTTTCCAGTTCTATAGTTATCGACTTCAAAGTCTATTTGCTTGATTTATGCAAATATTTGAGTTCATACGTGTGAGTTTGTTGAGAATATGTTAAATATATTGAATGGAGTTTTAATTATCGGTTCAACTTTTATAGTAAGTAGCAATTGAAGAAGATATTAGAATAGTGAAAGAAATAGTGGCAAATTAAGAGCTTGTTTGGATGGTCTTTTAGT

mRNA sequence

GAGGGAGTTCTTTGGGGAGTCTCCCATCCGATTGAGTTCCTTCGCGCGCTGCTGTGTCTGCTAATCGGAGACGATACTGATTTTTTTAAGCTCGATACGGTTGCTCAGGTTTGGCAATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGATTTTGGTTATGTACAAACAACATCAACTGAGGTTCTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGCAAGGTAACAAACGGATGCCAGGTACGGCTGTCACTAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTCACATTCAGCTCAAGTGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGATTGTTGGTGGATCTGAACATACTTTGCGTGCAAGGCTCACATTTTCACAAGAATCACATGGAAACATCGTGAAAGAATCTGGACCTGTTAGTATGACCTTCACAATTCCAATGTACAACGCTTCAAAGCTCCAGGTTAAGTACTTGCAGATTGCAAAGAAGTCCAACACCTATAATCCGTATAGGTGGGTGAGATATGTGACACAAGCAAATTCATACGTGGCTCGATTGTGAATGTAAACTTCCTCGATCTTGATTCTCTTATTTACTATTTTGACCTGCCTGTCAGTAAATACTTGTCGTGGGTTTGGTTATCTGAGGCTGTGTTTAGTGCATATGCGAACCCTTTTCTTTTTTTTTTTTATCCTTTTGTAGAGTGAGTATGAATACCCACACCCATCAAATGCATCTCAGGATAACTGTAGTTACAATGTTCATAGTGGAATGCTTAAAGTTATCAATATTGCACTGTAAAATAATACATTAAGCCTGAGTGGCTCCATATTCTGAGTAGTAGGACATGTCGGTGCTCTGGAATTTACTTTGATATATTTGATTTGAACTTTTGAATTTGCTGATGATCAAGTATTAGAATATTAAGTTTTGAGTTTCCAGTTCTATAGTTATCGACTTCAAAGTCTATTTGCTTGATTTATGCAAATATTTGAGTTCATACGTGTGAGTTTGTTGAGAATATGTTAAATATATTGAATGGAGTTTTAATTATCGGTTCAACTTTTATAGTAAGTAGCAATTGAAGAAGATATTAGAATAGTGAAAGAAATAGTGGCAAATTAAGAGCTTGTTTGGATGGTCTTTTAGT

Coding sequence (CDS)

ATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGATTTTGGTTATGTACAAACAACATCAACTGAGGTTCTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGCAAGGTAACAAACGGATGCCAGGTACGGCTGTCACTAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTCACATTCAGCTCAAGTGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGATTGTTGGTGGATCTGAACATACTTTGCGTGCAAGGCTCACATTTTCACAAGAATCACATGGAAACATCGTGAAAGAATCTGGACCTGTTAGTATGACCTTCACAATTCCAATGTACAACGCTTCAAAGCTCCAGGTTAAGTACTTGCAGATTGCAAAGAAGTCCAACACCTATAATCCGTATAGGTGGGTGAGATATGTGACACAAGCAAATTCATACGTGGCTCGATTGTGA

Protein sequence

MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTDFKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQVKYLQIAKKSNTYNPYRWVRYVTQANSYVARL

Homology

[Close]

BLAST of Carg17163 vs. NCBI nr
Match: XP_022940552.1 (AP-4 complex subunit mu-like [Cucurbita moschata] >XP_022940553.1 AP-4 complex subunit mu-like [Cucurbita moschata] >XP_023523639.1 AP-4 complex subunit mu-like [Cucurbita pepo subsp. pepo] >KAG7037877.1 AP-4 complex subunit mu [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 892.5 bits (2305), Expect = 1.5e-255
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV
Sbjct: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. NCBI nr
Match: XP_022981817.1 (AP-4 complex subunit mu-like [Cucurbita maxima] >XP_022981818.1 AP-4 complex subunit mu-like [Cucurbita maxima])

HSP 1 Score: 890.6 bits (2300), Expect = 5.7e-255
Identity = 450/451 (99.78%), Postives = 451/451 (100.00%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVVGNEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVGNEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV
Sbjct: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. NCBI nr
Match: XP_008466524.1 (PREDICTED: AP-4 complex subunit mu [Cucumis melo])

HSP 1 Score: 875.5 bits (2261), Expect = 1.9e-250
Identity = 440/451 (97.56%), Postives = 447/451 (99.11%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFD+DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDTDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEA KRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKE+GPVSMTFTIPMYNAS+LQV
Sbjct: 361 FKEANKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. NCBI nr
Match: XP_038899311.1 (AP-4 complex subunit mu [Benincasa hispida])

HSP 1 Score: 872.5 bits (2253), Expect = 1.6e-249
Identity = 440/451 (97.56%), Postives = 445/451 (98.67%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLP LGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEA KRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKE+GPVSMTFTIPMYNAS+LQV
Sbjct: 361 FKEANKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. NCBI nr
Match: XP_004147850.2 (AP-4 complex subunit mu [Cucumis sativus] >KGN59994.1 hypothetical protein Csa_000799 [Cucumis sativus])

HSP 1 Score: 870.5 bits (2248), Expect = 6.1e-249
Identity = 438/451 (97.12%), Postives = 445/451 (98.67%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHL+NFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEA KRLEW LKKIVGGSEHTLRARLTFSQESHGNIVKE+GPVSMTFTIPMYNAS+LQV
Sbjct: 361 FKEANKRLEWSLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. ExPASy Swiss-Prot
Match: Q9SB50 (AP-4 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP4M PE=2 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 5.4e-224
Identity = 386/451 (85.59%), Postives = 411/451 (91.13%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKE+ K LEW LKKIVGG EHTLRA+LTFSQE HGNI KE+GPVSMTFTIPMYN SKLQV
Sbjct: 362 FKESNKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGPVSMTFTIPMYNVSKLQV 421

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKS++YNPYRWVRYVTQANSYVAR+
Sbjct: 422 KYLQIAKKSSSYNPYRWVRYVTQANSYVARI 451

[Close]

BLAST of Carg17163 vs. ExPASy Swiss-Prot
Match: Q9GPF0 (AP-4 complex subunit mu OS=Dictyostelium discoideum OX=44689 GN=apm4 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-73
Identity = 167/535 (31.21%), Postives = 280/535 (52.34%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           M SQFF+L+ +G+ I+F+DYR ++ K S EIFF+ V+  K     +  P FN+DG+NY +
Sbjct: 1   MFSQFFILNNKGETIIFKDYRFDISKDSNEIFFKHVQSMK----SEITPAFNIDGINYLY 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           +K   + FV TTR+  SPSL  ELL R +++I+DY   L E+++R NF+L+YELLDE++D
Sbjct: 61  IKKREMYFVFTTRLLVSPSLGFELLNRASKIIQDYTASLTEEAIRLNFILIYELLDELMD 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARL------------------PPLGPASIFVQGNK 180
           +G  Q+T TE LK++VF  P  + + +L                  PP         G+K
Sbjct: 121 YGVPQSTGTETLKAFVFTPPKQIKSKQLESDSIIDNFLKATNKISVPPKQGVKPIHSGSK 180

Query: 181 RMP------GTAVTKSVVGN----------------EPGGRNR--------EEIFVDIIE 240
                     T     VV N                  GG            EI++D+ E
Sbjct: 181 NSSSGGSSLSTNTVSKVVNNIVDSISGAATNLHNSTSGGGSGSGVTDADGDNEIYIDLCE 240

Query: 241 KISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSI----GRGGRSIYDYSSS 300
           +++V +SS+G IL +EI G IQMKSYL GNP + L L+ + +      R   +  +  ++
Sbjct: 241 RLTVLYSSNGTILRNEITGKIQMKSYLRGNPALSLGLSPEFTFKTIANRDESNENEIDNN 300

Query: 301 SGGG------------TVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 360
           + GG            + I+DDC+FHE      F  + T+   PP+G+F ++ YR++   
Sbjct: 301 NIGGVSNLSAPSSNTTSFIVDDCSFHECAG-SGFQPNNTINFKPPQGDFTLLKYRISNNN 360

Query: 361 KPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVG 420
             PF +   +E     + ++++ +R+ F++ +  N + V +P+P  T  ++  L+ G+  
Sbjct: 361 YTPFLVKTNLESTIRNRFDLVVTIRSNFSNKVVPNFIFVSIPVPKSTKSLTHSLDYGSQN 420

Query: 421 NTTDFKEATKR---LEWGLKKIVGGSEHTLRARL----TFSQESHGN------------- 452
              ++K++T+    + W +KK+ GG E  LR ++      S  S+ N             
Sbjct: 421 QKVEYKQSTQAGNLVFWSIKKLRGGMETILRIQIHVDGATSSSSNNNQQQQQPQIDVGST 480

[Close]

BLAST of Carg17163 vs. ExPASy Swiss-Prot
Match: O00189 (AP-4 complex subunit mu-1 OS=Homo sapiens OX=9606 GN=AP4M1 PE=1 SV=2)

HSP 1 Score: 271.9 bits (694), Expect = 1.3e-71
Identity = 160/467 (34.26%), Postives = 268/467 (57.39%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEV-PKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+     D   ++P V +  G ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGD---ESPVVMHHHGRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  V TT  N SP  +LELL R+A ++ DY G L E ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTE+L++++  E +V     L  L    +F    Q +K  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    E+R+ L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPG 360
               PFR+   ++ + G  + +V LK+R +  S   A  V + +PLP     +S EL   
Sbjct: 301 PSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSLSQELS-- 360

Query: 361 AVGNTTDFKEATKRLEWGLKKIVGGSEHTLRARLTF----SQESHGNIVKES----GPVS 420
                   + A   L W L ++ GGS+ +   ++         SHG     S    GP S
Sbjct: 361 --SPEQKAELAEGALRWDLPRVQGGSQLSGLFQMDVPGPPGPPSHGLSTSASPLGLGPAS 420

Query: 421 MTFTIPMYNASKLQVKYLQIA-KKSNTYNPYRWVRYVTQANSYVARL 452
           ++F +P +  S LQV++L++A +     NP++WVR+++ +++YV R+
Sbjct: 421 LSFELPRHTCSGLQVRFLRLAFRPCGNANPHKWVRHLSHSDAYVIRI 453

[Close]

BLAST of Carg17163 vs. ExPASy Swiss-Prot
Match: Q9JKC7 (AP-4 complex subunit mu-1 OS=Mus musculus OX=10090 GN=Ap4m1 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 8.2e-71
Identity = 158/463 (34.13%), Postives = 265/463 (57.24%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEV-PKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+        G++P V      ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLP---GGESPVVMYHGDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G LNE ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTLENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTE+L++++  E +V     L  L    +F    Q NK  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQNKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    EI + L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEICIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPG 360
               PFR+   ++ + G  + +V LK+R +      A  + + +PLP     +S EL   
Sbjct: 301 PSPLPFRLFPSVQWDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLPRGVISLSQEL--S 360

Query: 361 AVGNTTDFKEATKRLEWGLKKIVGGSEHTLRARLTF----SQESHGNIVKESGPVSMTFT 420
           +     +  E    L W L ++ GGS+ +   ++         +HG      GP S++F 
Sbjct: 361 SPDQKAELGEGA--LHWDLPRVQGGSQLSGLFQMDVPGLQGLPNHGPSPLGLGPASLSFE 420

Query: 421 IPMYNASKLQVKYLQIA-KKSNTYNPYRWVRYVTQANSYVARL 452
           +P +  S LQV++L+++       NP++WVR+++ +N+YV R+
Sbjct: 421 LPRHTCSGLQVRFLRLSFSACGNANPHKWVRHLSHSNAYVIRI 449

[Close]

BLAST of Carg17163 vs. ExPASy Swiss-Prot
Match: Q29RY8 (AP-4 complex subunit mu-1 OS=Bos taurus OX=9913 GN=AP4M1 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-70
Identity = 158/466 (33.91%), Postives = 267/466 (57.30%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEV-PKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+     D   ++P V + D  ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGD---ESPVVMHHDDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G L E ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTSENISPFSLLELLSRLATLLGDYCGSLGEATISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTEVL++++  E +V     L  L    +F    Q +K  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEVLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    E+R+ L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVYLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPG 360
               PFR+   ++ + G  + +V LK+R +      A  V + +PLP     +S EL   
Sbjct: 301 PSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLPPKSQALNVRLHLPLPRGVVSLSQEL--S 360

Query: 361 AVGNTTDFKEATKRLEWGLKKIVGGSEHTLRARLTF-------SQESHGNIVKESGPVSM 420
           +     +  E    L W L ++ GGS+ +   ++          Q    +     GP S+
Sbjct: 361 SPEQKAELGEGA--LRWDLPRVQGGSQLSGLFQMDVPGLPGPPGQGPSASAPLGLGPASL 420

Query: 421 TFTIPMYNASKLQVKYLQIA-KKSNTYNPYRWVRYVTQANSYVARL 452
           +F +P +  S LQV++L++A +     NP++WVR+++ +++YV R+
Sbjct: 421 SFELPRHTCSGLQVRFLRLAFRPCGNANPHKWVRHLSHSDAYVIRI 452

[Close]

BLAST of Carg17163 vs. ExPASy TrEMBL
Match: A0A6J1FJY0 (AP-4 complex subunit mu-like OS=Cucurbita moschata OX=3662 GN=LOC111446118 PE=3 SV=1)

HSP 1 Score: 892.5 bits (2305), Expect = 7.3e-256
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV
Sbjct: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. ExPASy TrEMBL
Match: A0A6J1IV20 (AP-4 complex subunit mu-like OS=Cucurbita maxima OX=3661 GN=LOC111480852 PE=3 SV=1)

HSP 1 Score: 890.6 bits (2300), Expect = 2.8e-255
Identity = 450/451 (99.78%), Postives = 451/451 (100.00%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVVGNEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVGNEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV
Sbjct: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. ExPASy TrEMBL
Match: A0A1S3CRM0 (AP-4 complex subunit mu OS=Cucumis melo OX=3656 GN=LOC103503915 PE=3 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 9.2e-251
Identity = 440/451 (97.56%), Postives = 447/451 (99.11%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFD+DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDTDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEA KRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKE+GPVSMTFTIPMYNAS+LQV
Sbjct: 361 FKEANKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. ExPASy TrEMBL
Match: A0A0A0LGF2 (MHD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860300 PE=3 SV=1)

HSP 1 Score: 870.5 bits (2248), Expect = 3.0e-249
Identity = 438/451 (97.12%), Postives = 445/451 (98.67%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHL+NFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEA KRLEW LKKIVGGSEHTLRARLTFSQESHGNIVKE+GPVSMTFTIPMYNAS+LQV
Sbjct: 361 FKEANKRLEWSLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. ExPASy TrEMBL
Match: A0A6J1C0G0 (AP-4 complex subunit mu OS=Momordica charantia OX=3673 GN=LOC111007330 PE=3 SV=1)

HSP 1 Score: 869.0 bits (2244), Expect = 8.6e-249
Identity = 438/451 (97.12%), Postives = 444/451 (98.45%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGR GR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRSGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGG+VILDDCNFHESVHLDNFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGSVILDDCNFHESVHLDNFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVIL+VRAEF SSITANT+MVQMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILRVRAEFPSSITANTIMVQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKEA KRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKE+GPVSMTFTIPMYNAS+LQV
Sbjct: 361 FKEANKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMTFTIPMYNASRLQV 420

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKSNTYNPYRWVRYVTQANSYVARL
Sbjct: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451

[Close]

BLAST of Carg17163 vs. TAIR 10
Match: AT4G24550.2 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 778.1 bits (2008), Expect = 3.9e-225
Identity = 386/451 (85.59%), Postives = 411/451 (91.13%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKESGPVSMTFTIPMYNASKLQV 420
           FKE+ K LEW LKKIVGG EHTLRA+LTFSQE HGNI KE+GPVSMTFTIPMYN SKLQV
Sbjct: 362 FKESNKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGPVSMTFTIPMYNVSKLQV 421

Query: 421 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           KYLQIAKKS++YNPYRWVRYVTQANSYVAR+
Sbjct: 422 KYLQIAKKSSSYNPYRWVRYVTQANSYVARI 451

[Close]

BLAST of Carg17163 vs. TAIR 10
Match: AT4G24550.3 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 641.3 bits (1653), Expect = 5.6e-184
Identity = 318/376 (84.57%), Postives = 340/376 (90.43%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKKIV 377
           FKE+ K LEW LKK++
Sbjct: 362 FKESNKMLEWNLKKVI 376

[Close]

BLAST of Carg17163 vs. TAIR 10
Match: AT4G24550.1 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 639.0 bits (1647), Expect = 2.8e-183
Identity = 318/374 (85.03%), Postives = 338/374 (90.37%), Query Frame = 0


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKK 375
           FKE+ K LEW LKK
Sbjct: 362 FKESNKMLEWNLKK 374

[Close]

BLAST of Carg17163 vs. TAIR 10
Match: AT1G60780.1 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 254.6 bits (649), Expect = 1.5e-67
Identity = 148/451 (32.82%), Postives = 243/451 (53.88%), Query Frame = 0


Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+   + D + + P  ++ +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYD-NGVTYMFVQ 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFG 122
              +  +  +R N + + +L  L R+  V K Y   L E+SLR NFV+VYELLDE++DFG
Sbjct: 66  HSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125

Query: 123 YVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGR- 182
           Y Q T   +L  ++  +   ++  + PP+                AVT +V     G + 
Sbjct: 126 YPQYTEARILSEFIKTDAYRMEVTQRPPM----------------AVTNAVSWRSEGIQY 185

Query: 183 NREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRS 242
            + E+F+D+IE +++  +S+G I+ S++ G ++M++YLTG PE +L LN+ + +   GR 
Sbjct: 186 KKNEVFLDVIENVNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGR- 245

Query: 243 IYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFR 302
                 ++ G  + L+D  FH+ V L  F++DRT+  +PP+G F +M YR++ + KP   
Sbjct: 246 ------ATKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIW 305

Query: 303 INALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTDF 362
           + A IE     + E+++K R++F    TA  V +++P+PT  +  +     G+     + 
Sbjct: 306 VEAQIESHSRSRVEMLIKARSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPE- 365

Query: 363 KEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKE-SGPVSMTFTIPMYNASKLQV 422
           K+A   L W +K   G  E+ LRA       +      E   P+ + F IP +  S +QV
Sbjct: 366 KDA---LVWKIKSFPGNKEYMLRAEFHLPSITAEEATPERKAPIRVKFEIPYFTVSGIQV 425

Query: 423 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           +YL+I +KS  Y    WVRY+T A  Y  RL
Sbjct: 426 RYLKIIEKSG-YQALPWVRYITMAGEYELRL 427

[Close]

BLAST of Carg17163 vs. TAIR 10
Match: AT1G10730.1 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 253.4 bits (646), Expect = 3.3e-67
Identity = 148/451 (32.82%), Postives = 243/451 (53.88%), Query Frame = 0


Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+   + D + + P  ++ +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYD-NGVTYMFVQ 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFG 122
              +  +  +R N + + +L  L R+  V K Y   L E+SLR NFV+VYELLDE++DFG
Sbjct: 66  HSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125

Query: 123 YVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGR- 182
           Y Q T   +L  ++  +   ++  + PP+                AVT SV     G + 
Sbjct: 126 YPQFTEARILSEFIKTDAYRMEVTQRPPM----------------AVTNSVSWRSEGLKF 185

Query: 183 NREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRS 242
            + E+F+D+IE +++  +S+G I+ S++ G ++M++YL+G PE +L LN+ + +   GR+
Sbjct: 186 KKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRA 245

Query: 243 IYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFR 302
           I        G  + L+D  FH+ V L  F++DRT+  +PP+G F +M YR++ + KP   
Sbjct: 246 I-------KGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIW 305

Query: 303 INALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTDF 362
           + A IE     + E+++K R++F     A +V +++P+PT           G+     + 
Sbjct: 306 VEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPE- 365

Query: 363 KEATKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKE-SGPVSMTFTIPMYNASKLQV 422
           K+A   L W ++   G  EHTL+A       +      E   P+ + F IP +  S +QV
Sbjct: 366 KDA---LVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQV 425

Query: 423 KYLQIAKKSNTYNPYRWVRYVTQANSYVARL 452
           +YL+I +KS  Y  + WVRY+T A  Y  RL
Sbjct: 426 RYLKIIEKSG-YQAHPWVRYITMAGEYELRL 427

The following BLAST results are available for this feature:

BLAST of Carg17163 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940552.1	1.5e-255	100.00	AP-4 complex subunit mu-like [Cucurbita moschata] >XP_022940553.1 AP-4 complex s...	[more]
XP_022981817.1	5.7e-255	99.78	AP-4 complex subunit mu-like [Cucurbita maxima] >XP_022981818.1 AP-4 complex sub...	[more]
XP_008466524.1	1.9e-250	97.56	PREDICTED: AP-4 complex subunit mu [Cucumis melo]	[more]
XP_038899311.1	1.6e-249	97.56	AP-4 complex subunit mu [Benincasa hispida]	[more]
XP_004147850.2	6.1e-249	97.12	AP-4 complex subunit mu [Cucumis sativus] >KGN59994.1 hypothetical protein Csa_0...	[more]

BLAST of Carg17163 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB50	5.4e-224	85.59	AP-4 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP4M PE=2 SV=1	[more]
Q9GPF0	1.8e-73	31.21	AP-4 complex subunit mu OS=Dictyostelium discoideum OX=44689 GN=apm4 PE=2 SV=1	[more]
O00189	1.3e-71	34.26	AP-4 complex subunit mu-1 OS=Homo sapiens OX=9606 GN=AP4M1 PE=1 SV=2	[more]
Q9JKC7	8.2e-71	34.13	AP-4 complex subunit mu-1 OS=Mus musculus OX=10090 GN=Ap4m1 PE=1 SV=1	[more]
Q29RY8	1.1e-70	33.91	AP-4 complex subunit mu-1 OS=Bos taurus OX=9913 GN=AP4M1 PE=2 SV=1	[more]

BLAST of Carg17163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJY0	7.3e-256	100.00	AP-4 complex subunit mu-like OS=Cucurbita moschata OX=3662 GN=LOC111446118 PE=3 ...	[more]
A0A6J1IV20	2.8e-255	99.78	AP-4 complex subunit mu-like OS=Cucurbita maxima OX=3661 GN=LOC111480852 PE=3 SV...	[more]
A0A1S3CRM0	9.2e-251	97.56	AP-4 complex subunit mu OS=Cucumis melo OX=3656 GN=LOC103503915 PE=3 SV=1	[more]
A0A0A0LGF2	3.0e-249	97.12	MHD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860300 PE=3 SV...	[more]
A0A6J1C0G0	8.6e-249	97.12	AP-4 complex subunit mu OS=Momordica charantia OX=3673 GN=LOC111007330 PE=3 SV=1	[more]

BLAST of Carg17163 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24550.2	3.9e-225	85.59	Clathrin adaptor complexes medium subunit family protein	[more]
AT4G24550.3	5.6e-184	84.57	Clathrin adaptor complexes medium subunit family protein	[more]
AT4G24550.1	2.8e-183	85.03	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G60780.1	1.5e-67	32.82	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G10730.1	3.3e-67	32.82	Clathrin adaptor complexes medium subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001392	Clathrin adaptor, mu subunit	PRINTS	PR00314	CLATHRINADPT	coord: 256..283 score: 46.1 coord: 12..32 score: 32.03 coord: 101..128 score: 64.94 coord: 325..340 score: 32.95
IPR001392	Clathrin adaptor, mu subunit	PIRSF	PIRSF005992	AP_complex_mu	coord: 1..451 e-value: 2.0E-110 score: 367.9
None	No IPR available	GENE3D	3.30.450.60		coord: 1..141 e-value: 3.7E-45 score: 155.2
None	No IPR available	GENE3D	2.60.40.1170	Mu homology domain, subdomain B	coord: 182..446 e-value: 8.5E-88 score: 296.0
None	No IPR available	GENE3D	2.60.40.1170	Mu homology domain, subdomain B	coord: 298..450 e-value: 8.5E-88 score: 296.0
None	No IPR available	PANTHER	PTHR10529:SF347	AP-4 COMPLEX SUBUNIT MU-LIKE	coord: 2..451
None	No IPR available	PANTHER	PTHR10529	AP COMPLEX SUBUNIT MU	coord: 2..451
None	No IPR available	CDD	cd14838	AP4_Mu_N	coord: 3..143 e-value: 1.3256E-91 score: 271.729
None	No IPR available	CDD	cd09253	AP-4_Mu4_Cterm	coord: 178..451 e-value: 7.11191E-154 score: 435.462
IPR028565	Mu homology domain	PFAM	PF00928	Adap_comp_sub	coord: 182..450 e-value: 4.3E-70 score: 236.1
IPR028565	Mu homology domain	PROSITE	PS51072	MHD	coord: 183..450 score: 36.591652
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..132 e-value: 2.1E-5 score: 24.5
IPR036168	AP-2 complex subunit mu, C-terminal superfamily	SUPERFAMILY	49447	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	coord: 182..450
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17163-RA	Carg17163-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090160	Golgi to lysosome transport
biological_process	GO:0006605	protein targeting
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030131	clathrin adaptor complex
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005802	trans-Golgi network