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Carg17092 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTCAACTAAATCAACACCGAGAAGGGTTCTGATCGTCGTCACGATGATGGTTGCTCTTATCATCGTCGGCTTGCTTCCAATGGCAGCGGAGGCGACTGTCCCTGCCGGGGGTGCAGTCTCTCAATGCATCCAGGGTTGCACAAAGTCATTGGCCGGTTTAACGTCTGGTTATTGCCTTACTCTTTGTTCAGCTGAGTTCCACCCTCTATCTGCTCACCCACATCATCATGAACATGATCATAGCCATGCTCATGTTCGTGTTGATGCTCATGCTCACGTTGATGATCATGGTCACGTTCATGCTCATGTTCATGCACATGTTGATGGTCATGGTCATCTTCAAGCTCATGTTCATGCTCATGCTCATGCGCTTCATTAG ATGAACTCAACTAAATCAACACCGAGAAGGGTTCTGATCGTCGTCACGATGATGGTTGCTCTTATCATCGTCGGCTTGCTTCCAATGGCAGCGGAGGCGACTGTCCCTGCCGGGGGTGCAGTCTCTCAATGCATCCAGGGTTGCACAAAGTCATTGGCCGGTTTAACGTCTGGTTATTGCCTTACTCTTTGTTCAGCTGAGTTCCACCCTCTATCTGCTCACCCACATCATCATGAACATGATCATAGCCATGCTCATGTTCGTGTTGATGCTCATGCTCACGTTGATGATCATGGTCACGTTCATGCTCATGTTCATGCACATGTTGATGGTCATGGTCATCTTCAAGCTCATGTTCATGCTCATGCTCATGCGCTTCATTAG ATGAACTCAACTAAATCAACACCGAGAAGGGTTCTGATCGTCGTCACGATGATGGTTGCTCTTATCATCGTCGGCTTGCTTCCAATGGCAGCGGAGGCGACTGTCCCTGCCGGGGGTGCAGTCTCTCAATGCATCCAGGGTTGCACAAAGTCATTGGCCGGTTTAACGTCTGGTTATTGCCTTACTCTTTGTTCAGCTGAGTTCCACCCTCTATCTGCTCACCCACATCATCATGAACATGATCATAGCCATGCTCATGTTCGTGTTGATGCTCATGCTCACGTTGATGATCATGGTCACGTTCATGCTCATGTTCATGCACATGTTGATGGTCATGGTCATCTTCAAGCTCATGTTCATGCTCATGCTCATGCGCTTCATTAG MNSTKSTPRRVLIVVTMMVALIIVGLLPMAAEATVPAGGAVSQCIQGCTKSLAGLTSGYCLTLCSAEFHPLSAHPHHHEHDHSHAHVRVDAHAHVDDHGHVHAHVHAHVDGHGHLQAHVHAHAHALH Homology
BLAST of Carg17092 vs. NCBI nr
Match: KAG6591952.1 (hypothetical protein SDJN03_14298, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024824.1 hypothetical protein SDJN02_13643, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.5 bits (615), Expect = 3.9e-60 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Carg17092 vs. NCBI nr
Match: KAA0064320.1 (histidine-rich glycoprotein-like isoform X2 [Cucumis melo var. makuwa] >TYK20266.1 histidine-rich glycoprotein-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 2.3e-07 Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Carg17092 vs. NCBI nr
Match: KAE8649837.1 (hypothetical protein Csa_012364 [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 4.3e-06 Identity = 58/136 (42.65%), Postives = 75/136 (55.15%), Query Frame = 0
BLAST of Carg17092 vs. NCBI nr
Match: CAD5218578.1 (unnamed protein product [Bursaphelenchus okinawaensis] >CAG9111039.1 unnamed protein product [Bursaphelenchus okinawaensis]) HSP 1 Score: 61.6 bits (148), Expect = 5.6e-06 Identity = 35/60 (58.33%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Carg17092 vs. NCBI nr
Match: CAD5209452.1 (unnamed protein product [Bursaphelenchus okinawaensis] >CAG9089349.1 unnamed protein product [Bursaphelenchus okinawaensis]) HSP 1 Score: 60.1 bits (144), Expect = 1.6e-05 Identity = 33/53 (62.26%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of Carg17092 vs. ExPASy Swiss-Prot
Match: A9GP90 (Urease accessory protein UreG OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=ureG PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05 Identity = 27/52 (51.92%), Postives = 29/52 (55.77%), Query Frame = 0
BLAST of Carg17092 vs. ExPASy TrEMBL
Match: A0A5A7VAR8 (Histidine-rich glycoprotein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004060 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07 Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Carg17092 vs. ExPASy TrEMBL
Match: A0A401QIR4 (Uncharacterized protein (Fragment) OS=Scyliorhinus torazame OX=75743 GN=scyTo_0025968 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.9e-06 Identity = 33/53 (62.26%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of Carg17092 vs. ExPASy TrEMBL
Match: A0A401QK83 (Uncharacterized protein (Fragment) OS=Scyliorhinus torazame OX=75743 GN=scyTo_0026490 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.9e-05 Identity = 33/55 (60.00%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of Carg17092 vs. ExPASy TrEMBL
Match: A0A401QL29 (Uncharacterized protein (Fragment) OS=Scyliorhinus torazame OX=75743 GN=scyTo_0026721 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 31/52 (59.62%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of Carg17092 vs. ExPASy TrEMBL
Match: A0A7L5Y3L7 (Urease accessory protein UreE OS=Burkholderiaceae bacterium OX=2030806 GN=ureE PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04 Identity = 30/52 (57.69%), Postives = 31/52 (59.62%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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