Carg17033 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17033
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr09: 4234069 .. 4239542 (-)
RNA-Seq Expression	Carg17033
Synteny	Carg17033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGAGAGGTCAGTTTATAGCCTTTTGTTGCTCTCTCACAAATTTAAGTTCCGCATGTCAATTGTGAACTTGTGTTCTATCAGTTGCTGTTCGTGTTTTCATGATGTGCTACTCGTTGAGATTTTAGTTTATATCTCGGTTTTGAAATTTCCACCCTTGAATTTGGAGTTTGTATATGAAGTGATTGTTGCATTTATCCTTGCTTTTTTTTTTTAAATCGAGGGTGATAATATTGATAATACCAAGCAGGATGATGAACTATCTCCAAACAGGAAAAATTGGACATTCACTGACAGAAAATATTGTAAATAATGGCCATACATTACAAAAAGCTTGTTCTTCAGTATTCGAAGGCTTGTTAACTCTTTAAGTTTAGGCGACCTTCCATATGTGTTGCCACCCTCCGATTCTTCTCCGAGCCCATGGATCATGATCCCATTGAGTAAGCACTCATCACTAGCCCAGTAGGGCCGAACTCAATAACTGTACGAGTCCATCAAGAAGTTTTTAGAATGTTTTATAGAAAGATTTAGCTATCTAGACATTTTAGAAATAGATATTTAGATATCTAGATATTTTAGGAATAAATTTAGAAGATCTTAAAAAATAAGATAAGAAGATCACAAATATGCAAAAAATATGATAGAAGATCACAAATGTGTGGTCTACATTATCTAGCATCTACTGTAAATACCCTTCACCTCCACCAAGTTTTCACCCGATTTTCATCCAAGAAAAGAAAAGTGTAGTAGTGTCGTAGATAGTGTCTTGTAATATCCTTCACCTCCACTGTAAATACCCTTCACCTCCACGTTTAGCTACTTTCGAGTATTTGGTTGAATTTGCTACATATTTGTGCCTAGTCATCTACACAACAAGTTTGACAAGAAAGCAGTCAAGTGTGTATTTGTTGGATATGACAATCAAAGAAAAGGGTGGAAGTGTTGTGATCCAACAAGTGGAAGATGCTACACTTCAAGAGATGTAGCTTTTGATGAAGCATTGAAGAAGAAAGTCTTACCATTCTCGAACAACATTGAAGAAATTCTACGACAGAAGACTGGAAGCAAGCTGCACACATTTATTCAAGTGTTGATGCGCTTGAAGATCCAAGTGATACTGATGTTGGTGAGCGAGAAATGCTCAACTAAGCAAACTCGGTGAAAAGGAAATGACACCTCAACAACTTAGGTGGTCAAGAATCCAAAAGGCAAATCGTAAGTATGTCAACGCAACTATTAGAGAAGACAAATGACCAATAAAATCCAAAAGTCAAATCCTAAGTACGTCAACGCAACTATTATAGAAGACGGATGACCAATATGGTACAGTGAATGAGTGTTAGTGTTGAGGGGGGATGTTAAAAGATTATCACTAGCCTAATAAGGTCAAACTCAATAATTTTACGAGTCTATTATCTAGAAGTTTTGAATGTTCTAAAAAGATTTAGATATCTAGATACTTCAGAAATAAATCTAGACCATATATAAATACCCTTCCACTCCACCAAGTTTTTCATCTAAGAAAAGAAAAATGTAGTAGTATCCTCTAAAGAGTGTCTTATAATCTCTTGGTCTTAATAAAGAGTATGAGTGTTTCCACAAAAGAGTTGTGGTCAATATTAAAGAGTTAATGTCAACTTTATGCAGGATGCTGACAAGGAAATAGTGCTCCATCACCTCCTAAAAAGTGCAGAAATGGTATATTTCATCCTGCATTCAAGTGTTTCTTTCTTTCTTTCTCTACTCTTGAAAGTTCAACTGTTTCAATTTAAATTTCACAAATTGTAACCTGCCGATGTCTATTTTTGAGCTTATCATCTACTTCTCGTGAATTATTATCAGGATGGTAACCTGAATAAAACACTTGGGTTTAGTGATTCTGCAGAAAGGCCAATTCTTGAGCATCAAAGTAGATTTCTTCAGGACAGGTTGCTACTAATTATGAATGATTAAGTTCTTTGATCTCTCTTCTTGTTCCTAGAGAACCATGACTTTTATTTACATTTACCCCCTTCCTCTCAAACGCTGCCTGCCTTAATTATGATATTGAAGTCTAACAGTTACGTATTTCTATTTTACACAACGATAAACTTTCTTAAAAGTTTAAAATTTTACATGTTGTTCTGTGTTGTTGGTTGAATTTTAGTATATTCCCCCATCTTTTCGTGCCATTTTCCTGCTTAATTTTATTGTGAACGTTTCTTTTTAACTACCGAGAGAATTAATTGATACGAGAGGTGGAAGAAGCATGCTATGCAGAGCTGTTGACCATAATTTGAAAATGCTGCGAAGACTTATGGCTTCAGTGTATGATACCTACTGCAACTGTGTGCTCATTTCACTTATTCGTTTCACGATTATAATATTCCTCCATTTAAGGATATGGGATTTTAATATATCACTTGGTTCCTTTACTGCTCATTTAGTTGCTGCTGTCAGTTTATTACTTCCATTGACAAGCAAACTTGAAGTGTGGTCGATTCATAATTTACATGAGGAATTAGTAGTTTTAAACCTTCATAGTTCTGTAATGTCTTGCATTATATTATTGTTATTCGATTAATGCATCATTCATTCTTATGAATGGCTTCTTGCATTTCTAAATGTTTCAACATTTCAGTGGTAGTTTTCTATAGGTATCTTTGGTGTCTAAAGAGATGATAGCCTGAAGAATATTCTCCTCATCACGGGATCATCTGGGGTATGCAGAAACTCACTATTATCACCTGATCTATGTTTACGTTGTTTAGATTTTGTACTTTTCATTGAAACAATGTGTCTTGTCTATGCAGTTTCTTCTTTTTAGTCTTGATGATATCTTAAAATTAAGTTGAAGCTGGTTTTGTGAAACTCTGTTGGGTTGTTTTTGTTCATCGTTGTAAATACAAGTAAATAAATCATTCTTTTGGCCGTTGTATGTTTCTTTGCCATTTTATTCCACCTCCAAATCTCTTCTGAATATTTGCTACTTGTATGGTGTTAGATGGCTATGAAGGCAACTGAAAATTTGTTTTGAGGTGCAGCTGTGCCATATTTTTAGTGGAATTCGTCTTTAATTCTTGCAAATTATCATATTAGAATGGCATATATTCTCGAATATCAAATAGTTTTTGTTTTTATTTTTTTTATTGTTTCATTTGTCCTATGAATTGAATGTTTACTTGAGGAATATTTGTTATCAAGGAAAGACTAATTGAGTATGAGTTTGCTGTGTGTTTTTATTCTATATGCCAATTTATCTACTCAAAATTTGCCAACTTTGCACTGTTTCTAGTTTGCTTGGAGTCTGGACTACTCTTTTTTTTTAAAAACTTTTGTTGTTGTTGCTTTTATGGATACAAAGAAATCAAGGGACTTCGATTGTTAATAACCACAGTGCTCTTTTGTTCAACCTTGATGGATGGTCTTTTTTGCAATGGATCCCTTAGTGCTGGTCTCCTCTACCTCCAGCGTGTGTAGTAACTCCATTTTTGATTGATGGATTATGAATATAAATATAAAGTATAAATATTGTTTCTTATTAAGAAAAAAAAAAAACTTGACTGTGTCTAATATATTCTTCTTCAGTTCAGTGCATCTGTCATTCAATCGGGAGCTGTTCTCGAGCAGATGATTGGAGAGGCTTTACAATCTCATCAGCTAAAATGGTTCGTTCTATTTAAATTTTGGCTTGGATTTCTCCATGTTATAATTTCTTTCTTGAACTTTATGGCATTGCTCGTTCTGCATGTGTTTGGTTACTCCTTGAAGAGAATGGTATTAGAAAGAAAAAAAATTTTTAATTTCGTTGTCTGGTGAATCTGTATTGCTGATTTTTCCTTCAAAAAAGAGCATCAAATTGGGACATTGTGATATTACTGTAAAATTAGCTCTTTATCAAATTCTCCTTTTGGCTGGCCATAAATCTTTTTAATAGTGACTGAAAAGATGATTATATTATATGTCAGTAAAACATTTCCAGGGGTCGAAGAACAATTTTATTGGGAAGTGTTGTTCTCTTCAAGAGAGTACACCAGCCAAATGTTTAGCGACTAAGGTGATTGAACTCATCCCTTTATCAGACGATGATTCTAAAGATTACATTAAAGGTGTTGGAGAATTTGAATTCATCGAATCTGTAAGCACCAGCAACCAAGTTGAAGCTAAGCCTTTTAATTATTTTAGAGGACGTGGATATCATTTTTCTTGAGGATCCTGGTTTTGTTTCTGCAATTCAAGAGATTGTTGACACAGGAAAGGGACCCATAATTTTGACCAGCAATAGTAAGAGTGCTTACTTGTGGAATTGATTTCATTTTGTAGGAATTTTACAGAATACAATGATTTATTCACTTGTTTTATCCTTGAACTATAGGTAGCAGTCCTGTTCTCCCTAATACTTTTGGATAGGCTACAGGTCTTTTTTATACGACCACCATCAACGGAGATACTAGGCCATTTCTATATAAGGTGCGTGCTTCTGGCTCATCTACTACTAATGACATATAACTTAATTTCCACTCAGTTGATTCGTTATTGGTTCCCTTTCAGATTTGTGTTGCTGAAGGAGTCAGCAACCAACCATTCTTAAGGTATTATTCATTGTTGCCACAAAGAGATACGGAAAACCATTGTGTTTCTTCAGTTCAGGTGCCAGGGTAAAAGATTTAGAGGTCAGTCATGCTTTCAAAACTCACAACAAACTTTGACGTTAATATTTTGATTTGACACCATGCACTTCAAAATGGCCACAATTGGAATGTTTGTTTGGTGTTCGTTTGACTCTAAATTTGGTGAGGTTACATCTATATTAATGTGAACTTTGTCAACCCTAGTCTAGACTTTCCCACCCCACGGAAGTAAGAGGAAAGCCTTCAAAGCAGATGACATAAACCCTTTGTTTTAGTCGGGCAATGATGAACATTTTTTGCTGAATTTGTTTTTGGTTTTTTTGTTTAACTCTAGAGCCACTTGTCAAAACTCGTGACAAAACTTTGACTTTCAAAGTTATGGCTTGGAGATCCACTTCGACCTTCATTGAGGTCATCTCTAATACTCTTGATAGGAATGTCGCTCTATTCTTGCTTGCGCTTGAGTTTGGCGATTTTGCTCACTTTTTTTGGTGTGTTAGATGATGCATTGTCTTCTTTGGTCATACATTACCGACACTTGCATGCCACCACAACTCTTGTACACCGTGTGAGTCAAAAATTACTTTTTTCTAGTATGATTGTGACTTAACCCACAAAAATGGGTGCAGTCAAACATGCCCCCACTATTACTCTCTTGAAAAATACTTCTTAGTAGACCATTACTCACGATTTGGTTGGCATGTGGGTTGCCATTGTGAAATGAGTGGTTTCTATGTATTTGTTTAGATAATCTCTTTTAACTTTAAAAAATGTTTAATAGATTTTCATTTCAATTTTACTTGATAGATTTTCAAACTTTAATTTTACCTAATAGATTTTTGACATTTGGTTTTTCTT

mRNA sequence

ATGATTAGAGAGGATGCTGACAAGGAAATAGTGCTCCATCACCTCCTAAAAAGTGCAGAAATGGATGGTAACCTGAATAAAACACTTGGGTTTAGTGATTCTGCAGAAAGGCCAATTCTTGAGCATCAAAGTAGATTTCTTCAGGACAGAGATGATAGCCTGAAGAATATTCTCCTCATCACGGGATCATCTGGGTTCAGTGCATCTGTCATTCAATCGGGAGCTGTTCTCGAGCAGATGATTGGAGAGGCTTTACAATCTCATCAGCTAAAATGGTTCGTTCTATTTAAATTTTGGCTTGGATTTCTCCATGTTATAATTTCTTTCTTGAACTTTATGGCATTGCTCGTTCTGCATGTGTTTGGTTACTCCTTGAAGAGAATGGGGTCGAAGAACAATTTTATTGGGAAGTGTTGTTCTCTTCAAGAGAGTACACCAGCCAAATGTTTAGCGACTAAGGTGATTGAACTCATCCCTTTATCAGACGATGATTCTAAAGATTACATTAAAGGTGTTGGAGAATTTGAATTCATCGAATCTGTAGCAGTCCTGTTCTCCCTAATACTTTTGGATAGGCTACAGATTTGTGTTGCTGAAGGAGTCAGCAACCAACCATTCTTAAGGTATTATTCATTGTTGCCACAAAGAGATACGGAAAACCATTGTGTTTCTTCAGTTCAGGTGCCAGGGTAAAAGATTTAGAGGTCAGTCATGCTTTCAAAACTCACAACAAACTTTGACGTTAATATTTTGATTTGACACCATGCACTTCAAAATGGCCACAATTGGAATGTTTGTTTGGTGTTCGTTTGACTCTAAATTTGGTGAGGTTACATCTATATTAATGTGAACTTTGTCAACCCTAGTCTAGACTTTCCCACCCCACGGAAGTAAGAGGAAAGCCTTCAAAGCAGATGACATAAACCCTTTGTTTTAGTCGGGCAATGATGAACATTTTTTGCTGAATTTGTTTTTGGTTTTTTTGTTTAACTCTAGAGCCACTTGTCAAAACTCGTGACAAAACTTTGACTTTCAAAGTTATGGCTTGGAGATCCACTTCGACCTTCATTGAGGTCATCTCTAATACTCTTGATAGGAATGTCGCTCTATTCTTGCTTGCGCTTGAGTTTGGCGATTTTGCTCACTTTTTTTGGTGTGTTAGATGATGCATTGTCTTCTTTGGTCATACATTACCGACACTTGCATGCCACCACAACTCTTGTACACCGTGTGAGTCAAAAATTACTTTTTTCTAGTATGATTGTGACTTAACCCACAAAAATGGGTGCAGTCAAACATGCCCCCACTATTACTCTCTTGAAAAATACTTCTTAGTAGACCATTACTCACGATTTGGTTGGCATGTGGGTTGCCATTGTGAAATGAGTGGTTTCTATGTATTTGTTTAGATAATCTCTTTTAACTTTAAAAAATGTTTAATAGATTTTCATTTCAATTTTACTTGATAGATTTTCAAACTTTAATTTTACCTAATAGATTTTTGACATTTGGTTTTTCTT

Coding sequence (CDS)

ATGATTAGAGAGGATGCTGACAAGGAAATAGTGCTCCATCACCTCCTAAAAAGTGCAGAAATGGATGGTAACCTGAATAAAACACTTGGGTTTAGTGATTCTGCAGAAAGGCCAATTCTTGAGCATCAAAGTAGATTTCTTCAGGACAGAGATGATAGCCTGAAGAATATTCTCCTCATCACGGGATCATCTGGGTTCAGTGCATCTGTCATTCAATCGGGAGCTGTTCTCGAGCAGATGATTGGAGAGGCTTTACAATCTCATCAGCTAAAATGGTTCGTTCTATTTAAATTTTGGCTTGGATTTCTCCATGTTATAATTTCTTTCTTGAACTTTATGGCATTGCTCGTTCTGCATGTGTTTGGTTACTCCTTGAAGAGAATGGGGTCGAAGAACAATTTTATTGGGAAGTGTTGTTCTCTTCAAGAGAGTACACCAGCCAAATGTTTAGCGACTAAGGTGATTGAACTCATCCCTTTATCAGACGATGATTCTAAAGATTACATTAAAGGTGTTGGAGAATTTGAATTCATCGAATCTGTAGCAGTCCTGTTCTCCCTAATACTTTTGGATAGGCTACAGATTTGTGTTGCTGAAGGAGTCAGCAACCAACCATTCTTAAGGTATTATTCATTGTTGCCACAAAGAGATACGGAAAACCATTGTGTTTCTTCAGTTCAGGTGCCAGGGTAA

Protein sequence

MIREDADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDRDDSLKNILLITGSSGFSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCSLQESTPAKCLATKVIELIPLSDDDSKDYIKGVGEFEFIESVAVLFSLILLDRLQICVAEGVSNQPFLRYYSLLPQRDTENHCVSSVQVPG

Homology

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BLAST of Carg17033 vs. NCBI nr
Match: KAG7024769.1 (hypothetical protein SDJN02_13587, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.8 bits (1161), Expect = 3.5e-123
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MIREDADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDRDDSLKNILLI 60
           MIREDADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDRDDSLKNILLI
Sbjct: 1   MIREDADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDRDDSLKNILLI 60

Query: 61  TGSSGFSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHV 120
           TGSSGFSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHV
Sbjct: 61  TGSSGFSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHV 120

Query: 121 FGYSLKRMGSKNNFIGKCCSLQESTPAKCLATKVIELIPLSDDDSKDYIKGVGEFEFIES 180
           FGYSLKRMGSKNNFIGKCCSLQESTPAKCLATKVIELIPLSDDDSKDYIKGVGEFEFIES
Sbjct: 121 FGYSLKRMGSKNNFIGKCCSLQESTPAKCLATKVIELIPLSDDDSKDYIKGVGEFEFIES 180

Query: 181 VAVLFSLILLDRLQICVAEGVSNQPFLRYYSLLPQRDTENHCVSSVQVPG 231
           VAVLFSLILLDRLQICVAEGVSNQPFLRYYSLLPQRDTENHCVSSVQVPG
Sbjct: 181 VAVLFSLILLDRLQICVAEGVSNQPFLRYYSLLPQRDTENHCVSSVQVPG 230

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BLAST of Carg17033 vs. NCBI nr
Match: KAG6591896.1 (hypothetical protein SDJN03_14242, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.4 bits (882), Expect = 7.8e-91
Identity = 184/220 (83.64%), Postives = 192/220 (87.27%), Query Frame = 0


Query: 4   EDADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDRDDSLKNILLITGS 63
           +DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDRDDSLKNILLITGS
Sbjct: 123 QDADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDRDDSLKNILLITGS 182

Query: 64  SGFSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGY 123
           SGFSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGY
Sbjct: 183 SGFSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGY 242

Query: 124 SLKRMGSKNNFIGKCCSLQESTPAKCLATKVIELIPLSDDDSKDYIKGVGEFEFIESVAV 183
           SLKRMGSKNNFIGKCCSLQESTPAKCLATKVIELIPLSD+DSKDYIK +        VAV
Sbjct: 243 SLKRMGSKNNFIGKCCSLQESTPAKCLATKVIELIPLSDNDSKDYIKAI--------VAV 302

Query: 184 LFSLILLDRLQICVAEGVSNQPFLRYY--SLLPQRDTENH 222
           LFSLILLDRLQ+      S +    +Y   +L +    NH
Sbjct: 303 LFSLILLDRLQVFFIRPPSTEILGHFYIRFVLLKESATNH 334

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BLAST of Carg17033 vs. NCBI nr
Match: XP_038898741.1 (uncharacterized protein LOC120086264 isoform X2 [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-35
Identity = 119/304 (39.14%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           DADKEI+LHHL  SAEMD NLNKT G SDS  RPILEHQ+RFL+DR              
Sbjct: 263 DADKEIMLHHLPSSAEMDDNLNKTRGLSDSEARPILEHQNRFLEDRMQSYYLRCQSRPKN 322

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 323 CLWTYKYQPKMAMEVCGNLESVKFLSEWLHLWYERNSQNNKDFGGGNKFQKQDNDGYCSQ 382

Query: 125 ----------DDSLKNILLITGSSG--------------------FSASVIQSGAVLEQM 184
                      DSL N+LL+TGSSG                    FSASVI+SGAVL+QM
Sbjct: 383 SDSDYESPDGKDSLTNVLLVTGSSGSGKSAAIYACAEEHGFRVFEFSASVIRSGAVLKQM 442

Query: 185 IGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCS 200
           IGEALQSHQLKW V                                  GS+N+FI KC S
Sbjct: 443 IGEALQSHQLKWSV------------------------------KNSQGSRNSFIEKCSS 502

[Close]

BLAST of Carg17033 vs. NCBI nr
Match: XP_038898740.1 (uncharacterized protein LOC120086264 isoform X1 [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-35
Identity = 119/304 (39.14%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           DADKEI+LHHL  SAEMD NLNKT G SDS  RPILEHQ+RFL+DR              
Sbjct: 264 DADKEIMLHHLPSSAEMDDNLNKTRGLSDSEARPILEHQNRFLEDRMQSYYLRCQSRPKN 323

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 324 CLWTYKYQPKMAMEVCGNLESVKFLSEWLHLWYERNSQNNKDFGGGNKFQKQDNDGYCSQ 383

Query: 125 ----------DDSLKNILLITGSSG--------------------FSASVIQSGAVLEQM 184
                      DSL N+LL+TGSSG                    FSASVI+SGAVL+QM
Sbjct: 384 SDSDYESPDGKDSLTNVLLVTGSSGSGKSAAIYACAEEHGFRVFEFSASVIRSGAVLKQM 443

Query: 185 IGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCS 200
           IGEALQSHQLKW V                                  GS+N+FI KC S
Sbjct: 444 IGEALQSHQLKWSV------------------------------KNSQGSRNSFIEKCSS 503

[Close]

BLAST of Carg17033 vs. NCBI nr
Match: XP_031740589.1 (uncharacterized protein LOC101216488 isoform X1 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-34
Identity = 115/304 (37.83%), Postives = 134/304 (44.08%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           D D+E +LHHLL S++MD NLNKT G SD   RPI EHQSRFLQDR              
Sbjct: 272 DVDQETMLHHLLSSSKMDDNLNKTRGISDFEARPIPEHQSRFLQDRMQSYYLRCQSHSKN 331

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 332 CLWTYKYQPRTAMEVCGNLESVKFLSEWLHLWYERNSQKKKDFAGGKKFQKQDNNGYCSQ 391

Query: 125 ----------DDSLKNILLITGSSG--------------------FSASVIQSGAVLEQM 184
                     +D LKN+LL+TGSSG                    FSASVI+SGAVL+QM
Sbjct: 392 SDSDYESPDEEDGLKNVLLVTGSSGSGKSAAVHACAEEHGFRVFEFSASVIRSGAVLKQM 451

Query: 185 IGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCS 200
           IGEALQSHQLKW V                               K  G +NNFI KC S
Sbjct: 452 IGEALQSHQLKWSV------------------------------KKSQGPRNNFIEKCSS 511

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BLAST of Carg17033 vs. ExPASy TrEMBL
Match: A0A0A0L0K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G365040 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.5e-34
Identity = 115/304 (37.83%), Postives = 134/304 (44.08%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           D D+E +LHHLL S++MD NLNKT G SD   RPI EHQSRFLQDR              
Sbjct: 263 DVDQETMLHHLLSSSKMDDNLNKTRGISDFEARPIPEHQSRFLQDRMQSYYLRCQSHSKN 322

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 323 CLWTYKYQPRTAMEVCGNLESVKFLSEWLHLWYERNSQKKKDFAGGKKFQKQDNNGYCSQ 382

Query: 125 ----------DDSLKNILLITGSSG--------------------FSASVIQSGAVLEQM 184
                     +D LKN+LL+TGSSG                    FSASVI+SGAVL+QM
Sbjct: 383 SDSDYESPDEEDGLKNVLLVTGSSGSGKSAAVHACAEEHGFRVFEFSASVIRSGAVLKQM 442

Query: 185 IGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCS 200
           IGEALQSHQLKW V                               K  G +NNFI KC S
Sbjct: 443 IGEALQSHQLKWSV------------------------------KKSQGPRNNFIEKCSS 502

[Close]

BLAST of Carg17033 vs. ExPASy TrEMBL
Match: A0A5A7TUP8 (Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G002560 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32
Identity = 113/304 (37.17%), Postives = 133/304 (43.75%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           DAD+E +LHHLL+SA++D NLNKT G S+   RPI EHQSRFLQDR              
Sbjct: 263 DADQETMLHHLLRSAKVDDNLNKTHGVSEFEARPISEHQSRFLQDRMQSYYLRCQGRSKN 322

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 323 CLWTYKYQPRTAMEVCGNLESVKFLSEWLHLWYERNSQNKKDFAGGNKFQKQDKNGYCSQ 382

Query: 125 ----------DDSLKNILLITGSSG--------------------FSASVIQSGAVLEQM 184
                     +D LKN+LL+TGSSG                    FSAS I+SGAVL+QM
Sbjct: 383 SDSDYESPDGEDGLKNVLLVTGSSGSGKSAAVYACAEEHSFRVFEFSASAIRSGAVLKQM 442

Query: 185 IGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCS 200
           IGEALQSHQLKW V                                  G +NNF+ K  S
Sbjct: 443 IGEALQSHQLKWSV------------------------------KTSQGPRNNFVEKSSS 502

[Close]

BLAST of Carg17033 vs. ExPASy TrEMBL
Match: A0A1S3BAH3 (uncharacterized protein LOC103487579 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487579 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32
Identity = 113/304 (37.17%), Postives = 133/304 (43.75%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           DAD+E +LHHLL+SA++D NLNKT G S+   RPI EHQSRFLQDR              
Sbjct: 182 DADQETMLHHLLRSAKVDDNLNKTHGVSEFEARPISEHQSRFLQDRMQSYYLRCQGRSKN 241

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 242 CLWTYKYQPRTAMEVCGNLESVKFLSEWLHLWYERNSQNKKDFAGGNKFQKQDKNGYCSQ 301

Query: 125 ----------DDSLKNILLITGSSG--------------------FSASVIQSGAVLEQM 184
                     +D LKN+LL+TGSSG                    FSAS I+SGAVL+QM
Sbjct: 302 SDSDYESPDGEDGLKNVLLVTGSSGSGKSAAVYACAEEHSFRVFEFSASAIRSGAVLKQM 361

Query: 185 IGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCS 200
           IGEALQSHQLKW V                                  G +NNF+ K  S
Sbjct: 362 IGEALQSHQLKWSV------------------------------KTSQGPRNNFVEKSSS 421

[Close]

BLAST of Carg17033 vs. ExPASy TrEMBL
Match: A0A1S3BAF7 (uncharacterized protein LOC103487579 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487579 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32
Identity = 113/304 (37.17%), Postives = 133/304 (43.75%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           DAD+E +LHHLL+SA++D NLNKT G S+   RPI EHQSRFLQDR              
Sbjct: 263 DADQETMLHHLLRSAKVDDNLNKTHGVSEFEARPISEHQSRFLQDRMQSYYLRCQGRSKN 322

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 323 CLWTYKYQPRTAMEVCGNLESVKFLSEWLHLWYERNSQNKKDFAGGNKFQKQDKNGYCSQ 382

Query: 125 ----------DDSLKNILLITGSSG--------------------FSASVIQSGAVLEQM 184
                     +D LKN+LL+TGSSG                    FSAS I+SGAVL+QM
Sbjct: 383 SDSDYESPDGEDGLKNVLLVTGSSGSGKSAAVYACAEEHSFRVFEFSASAIRSGAVLKQM 442

Query: 185 IGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLVLHVFGYSLKRMGSKNNFIGKCCS 200
           IGEALQSHQLKW V                                  G +NNF+ K  S
Sbjct: 443 IGEALQSHQLKWSV------------------------------KTSQGPRNNFVEKSSS 502

[Close]

BLAST of Carg17033 vs. ExPASy TrEMBL
Match: A0A5D3D6T0 (Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00770 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-29
Identity = 113/327 (34.56%), Postives = 133/327 (40.67%), Query Frame = 0


Query: 5   DADKEIVLHHLLKSAEMDGNLNKTLGFSDSAERPILEHQSRFLQDR-------------- 64
           DAD+E +LHHLL+SA++D NLNKT G S+   RPI EHQSRFLQDR              
Sbjct: 272 DADQETMLHHLLRSAKVDDNLNKTHGVSEFEARPISEHQSRFLQDRMQSYYLRCQGRSKN 331

Query: 65  ------------------------------------------------------------ 124
                                                                       
Sbjct: 332 CLWTYKYQPRTAMEVCGNLESVKFLSEWLHLWYERNSQNKKDFAGGNKFQKQDKNGYCSQ 391

Query: 125 ----------DDSLKNILLITGSSG----------------------------------- 184
                     +D LKN+LL+TGSSG                                   
Sbjct: 392 SDSDYESPDGEDGLKNVLLVTGSSGFPVTLTFFACLLNWARYSVTFLESGKSAAVYACAE 451

Query: 185 --------FSASVIQSGAVLEQMIGEALQSHQLKWFVLFKFWLGFLHVIISFLNFMALLV 200
                   FSAS I+SGAVL+QMIGEALQSHQLKW V                       
Sbjct: 452 EHSFRVFEFSASAIRSGAVLKQMIGEALQSHQLKWSV----------------------- 511

The following BLAST results are available for this feature:

BLAST of Carg17033 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024769.1	3.5e-123	100.00	hypothetical protein SDJN02_13587, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6591896.1	7.8e-91	83.64	hypothetical protein SDJN03_14242, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038898741.1	1.2e-35	39.14	uncharacterized protein LOC120086264 isoform X2 [Benincasa hispida]	[more]
XP_038898740.1	1.2e-35	39.14	uncharacterized protein LOC120086264 isoform X1 [Benincasa hispida]	[more]
XP_031740589.1	5.1e-34	37.83	uncharacterized protein LOC101216488 isoform X1 [Cucumis sativus]	[more]

BLAST of Carg17033 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg17033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0K9	2.5e-34	37.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G365040 PE=3 SV=1	[more]
A0A5A7TUP8	5.2e-32	37.17	Putative P-loop containing nucleoside triphosphate hydrolases superfamily protei...	[more]
A0A1S3BAH3	5.2e-32	37.17	uncharacterized protein LOC103487579 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BAF7	5.2e-32	37.17	uncharacterized protein LOC103487579 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3D6T0	2.4e-29	34.56	Putative P-loop containing nucleoside triphosphate hydrolases superfamily protei...	[more]

BLAST of Carg17033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17033-RA	Carg17033-RA	mRNA