Carg17032 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGTTTGAGAAGTACGGTAATAAGAAGAGGGTGATGGTTGTGGTAGATCATACATCGCAGTCCAAGCATGCTATGATGTGGGCTCTAACCCATGTGGCCAATAATGGTGATTTCCTCACTCTTCTTCACGTTGTTTCTCACTCAAACAAGCTCCTCTCTGAAACGCCTTCTCATTCTTCTTCCTCGTCATTTCTTGCCAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTATATAACTTCTGTTTTTGATCCTTTAGTTAGCCTTTAATTTGCATTTTCATCTTTAGACTGAATATATGAAGTAGGAAGGTTTTGGATGAACTATTATATATCCTCCTAGTCCTAGTGCTTAATGGGTTTTACCTGGATTTTCTATCCTTGGTTTCCCCTCCAATGCATGTGTTAATAAATAAAATGAAGGGTAAAAGAAAGCATAGTGGCTACTAGCTAGCCCTTTCCTAGTGCTCCCTCATCATCCAGATTCGAGGGCCATTTGTAAATGACAAAGGAAAGGGGAAATCGAGGTGGAACCATCTTTTTAAGTATTACATCAGTGCGGTGTTGGGTTCTGTGGGTGACTTTTTCTTATTTCTGGTGCAAAATTTCAGGTGGAAGTTGAAGCACTGGTGATACAAGGCCCGAAACTAGAGACAATTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTGGTGGTGCCCCAGAAAAAGCCTTCTCTGTTTGGATGGTGGGTACCAACCCATTCATTATCTTATCTTGGCCCTTTTTTCATCCAAAAAAACAAAAGCAGTAAAAAGTATGAATGATCATGAATACTAACCTGGTCGACATGGTCATTTCCTTGCAGCTTCTGTGGGACCAGCAGCTCAGAGCAGCTTGTGGAACAGTGCATCAGCCATGCCGATTGCTGTACAATTGGAGTTAG ATGGAAGGGTTTGAGAAGTACGGTAATAAGAAGAGGGTGATGGTTGTGGTAGATCATACATCGCAGTCCAAGCATGCTATGATGTGGGCTCTAACCCATGTGGCCAATAATGGTGATTTCCTCACTCTTCTTCACGTTGTTTCTCACTCAAACAAGCTCCTCTCTGAAACGCCTTCTCATTCTTCTTCCTCGTCATTTCTTGCCAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTGGAAGTTGAAGCACTGGTGATACAAGGCCCGAAACTAGAGACAATTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTGGTGGTGCCCCAGAAAAAGCCTTCTCTGTTTGGATGGTGGCTTCTGTGGGACCAGCAGCTCAGAGCAGCTTGTGGAACAGTGCATCAGCCATGCCGATTGCTGTACAATTGGAGTTAG ATGGAAGGGTTTGAGAAGTACGGTAATAAGAAGAGGGTGATGGTTGTGGTAGATCATACATCGCAGTCCAAGCATGCTATGATGTGGGCTCTAACCCATGTGGCCAATAATGGTGATTTCCTCACTCTTCTTCACGTTGTTTCTCACTCAAACAAGCTCCTCTCTGAAACGCCTTCTCATTCTTCTTCCTCGTCATTTCTTGCCAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTGGAAGTTGAAGCACTGGTGATACAAGGCCCGAAACTAGAGACAATTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTGGTGGTGCCCCAGAAAAAGCCTTCTCTGTTTGGATGGTGGCTTCTGTGGGACCAGCAGCTCAGAGCAGCTTGTGGAACAGTGCATCAGCCATGCCGATTGCTGTACAATTGGAGTTAG MEGFEKYGNKKRVMVVVDHTSQSKHAMMWALTHVANNGDFLTLLHVVSHSNKLLSETPSHSSSSSFLANSLGYLCKASRPEVEVEALVIQGPKLETILSQVKKLEASVLVVPQKKPSLFGWWLLWDQQLRAACGTVHQPCRLLYNWS Homology
BLAST of Carg17032 vs. NCBI nr
Match: KAG7024768.1 (hypothetical protein SDJN02_13586, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 300.4 bits (768), Expect = 8.3e-78 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Carg17032 vs. NCBI nr
Match: XP_022976863.1 (uncharacterized protein LOC111477107 [Cucurbita maxima] >XP_022976864.1 uncharacterized protein LOC111477107 [Cucurbita maxima] >XP_022976865.1 uncharacterized protein LOC111477107 [Cucurbita maxima] >XP_022976866.1 uncharacterized protein LOC111477107 [Cucurbita maxima] >XP_022976867.1 uncharacterized protein LOC111477107 [Cucurbita maxima] >XP_022976869.1 uncharacterized protein LOC111477107 [Cucurbita maxima] >XP_022976870.1 uncharacterized protein LOC111477107 [Cucurbita maxima]) HSP 1 Score: 234.2 bits (596), Expect = 7.3e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg17032 vs. NCBI nr
Match: XP_023536543.1 (uncharacterized protein LOC111797681 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.2 bits (596), Expect = 7.3e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg17032 vs. NCBI nr
Match: XP_022937140.1 (uncharacterized protein LOC111443527 [Cucurbita moschata] >XP_022937141.1 uncharacterized protein LOC111443527 [Cucurbita moschata] >XP_022937142.1 uncharacterized protein LOC111443527 [Cucurbita moschata] >KAG6591895.1 hypothetical protein SDJN03_14241, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 234.2 bits (596), Expect = 7.3e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg17032 vs. NCBI nr
Match: XP_008444147.1 (PREDICTED: uncharacterized protein LOC103487581 [Cucumis melo] >KAA0045242.1 UspA [Cucumis melo var. makuwa] >TYK19270.1 UspA [Cucumis melo var. makuwa]) HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48 Identity = 104/120 (86.67%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Carg17032 vs. ExPASy TrEMBL
Match: A0A6J1IGW5 (uncharacterized protein LOC111477107 OS=Cucurbita maxima OX=3661 GN=LOC111477107 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.5e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg17032 vs. ExPASy TrEMBL
Match: A0A6J1FAB1 (uncharacterized protein LOC111443527 OS=Cucurbita moschata OX=3662 GN=LOC111443527 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.5e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg17032 vs. ExPASy TrEMBL
Match: A0A5A7TPE6 (UspA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00780 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 8.7e-49 Identity = 104/120 (86.67%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Carg17032 vs. ExPASy TrEMBL
Match: A0A1S3B978 (uncharacterized protein LOC103487581 OS=Cucumis melo OX=3656 GN=LOC103487581 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 8.7e-49 Identity = 104/120 (86.67%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Carg17032 vs. ExPASy TrEMBL
Match: A0A0A0KYK7 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G364040 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 9.6e-48 Identity = 106/121 (87.60%), Postives = 111/121 (91.74%), Query Frame = 0
BLAST of Carg17032 vs. TAIR 10
Match: AT1G44760.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 129.4 bits (324), Expect = 2.3e-30 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of Carg17032 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 6.4e-12 Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0
BLAST of Carg17032 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 6.0e-10 Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of Carg17032 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 3.9e-09 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 0
BLAST of Carg17032 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08 Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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