Carg16947 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16947
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PRELI/MSF1 domain-containing protein
Location	Carg_Chr10: 4860989 .. 4861546 (+)
RNA-Seq Expression	Carg16947
Synteny	Carg16947

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGAGCATACTCTCAGGAGTACACCTACAAGCACCCGTGGGAACGGGTCACTTGTGCATCTTGGCGTAAATTTACCGACCCCGAAAACAAGCGTACATTATCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCAGAATCCGGGAAGCTCTATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTATCCGTAAGATCGTTGGTCAGGATATCTGCCACTGTGTCGAATCCACAGTTGTAGATGCTTGGTCGCAATCGATGCAACTCACCACTCGGAATATCAGTCTCCAGAAATTCATAGAAGTGGTGGAGAAAATCAGGTATGACCCTCACCCAGATAATCCGAACGGATGGACCATTTGCAGACAGGAGACGAGCATTCGAATCAAGCCATTGTCAGCACTCGCATCGATGGCTGAAAAAGTCGAGCAACGGTGCGCAGAGAGGTTTGTGCAGAACAGTGTCAAGGGTAGAGAAGTGATGGAGAGGATTTGCAAGTATCTTGAAGCTGAATCTAGCGGCCTCACAATCTAA

mRNA sequence

ATGGTTAGAGCATACTCTCAGGAGTACACCTACAAGCACCCGTGGGAACGGGTCACTTGTGCATCTTGGCGTAAATTTACCGACCCCGAAAACAAGCGTACATTATCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCAGAATCCGGGAAGCTCTATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTATCCGTAAGATCGTTGGTCAGGATATCTGCCACTGTGTCGAATCCACAGTTGTAGATGCTTGGTCGCAATCGATGCAACTCACCACTCGGAATATCAGTCTCCAGAAATTCATAGAAGTGGTGGAGAAAATCAGGTATGACCCTCACCCAGATAATCCGAACGGATGGACCATTTGCAGACAGGAGACGAGCATTCGAATCAAGCCATTGTCAGCACTCGCATCGATGGCTGAAAAAGTCGAGCAACGGTGCGCAGAGAGGTTTGTGCAGAACAGTGTCAAGGGTAGAGAAGTGATGGAGAGGATTTGCAAGTATCTTGAAGCTGAATCTAGCGGCCTCACAATCTAA

Coding sequence (CDS)

ATGGTTAGAGCATACTCTCAGGAGTACACCTACAAGCACCCGTGGGAACGGGTCACTTGTGCATCTTGGCGTAAATTTACCGACCCCGAAAACAAGCGTACATTATCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCAGAATCCGGGAAGCTCTATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTATCCGTAAGATCGTTGGTCAGGATATCTGCCACTGTGTCGAATCCACAGTTGTAGATGCTTGGTCGCAATCGATGCAACTCACCACTCGGAATATCAGTCTCCAGAAATTCATAGAAGTGGTGGAGAAAATCAGGTATGACCCTCACCCAGATAATCCGAACGGATGGACCATTTGCAGACAGGAGACGAGCATTCGAATCAAGCCATTGTCAGCACTCGCATCGATGGCTGAAAAAGTCGAGCAACGGTGCGCAGAGAGGTTTGTGCAGAACAGTGTCAAGGGTAGAGAAGTGATGGAGAGGATTTGCAAGTATCTTGAAGCTGAATCTAGCGGCCTCACAATCTAA

Protein sequence

MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHPDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAESSGLTI

Homology

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BLAST of Carg16947 vs. NCBI nr
Match: XP_022960775.1 (protein slowmo homolog [Cucurbita moschata] >XP_022988219.1 protein slowmo homolog [Cucurbita maxima] >XP_023516290.1 protein slowmo homolog [Cucurbita pepo subsp. pepo] >KAG7023860.1 Protein slowmo-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.7 bits (992), Expect = 1.1e-103
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SGLTI
Sbjct: 181 SGLTI 185

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BLAST of Carg16947 vs. NCBI nr
Match: XP_038880305.1 (protein slowmo homolog [Benincasa hispida] >XP_038880306.1 protein slowmo homolog [Benincasa hispida])

HSP 1 Score: 365.9 bits (938), Expect = 2.0e-97
Identity = 173/185 (93.51%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPW+RVTCASWRKF DPENKR LSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWDRVTCASWRKFADPENKRILSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           +G TI
Sbjct: 181 NGFTI 185

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BLAST of Carg16947 vs. NCBI nr
Match: XP_008450435.1 (PREDICTED: protein slowmo homolog [Cucumis melo] >TYK18842.1 protein slowmo-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Carg16947 vs. NCBI nr
Match: XP_022154131.1 (protein slowmo homolog [Momordica charantia])

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97
Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVT ASWRKF DPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHC+ES++VDA SQSMQL+TRNISLQ+FIEVVEKIRYDPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCIESSMVDAQSQSMQLSTRNISLQRFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAE+FVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+TI
Sbjct: 181 SGITI 185

[Close]

BLAST of Carg16947 vs. NCBI nr
Match: XP_011660128.1 (protein slowmo homolog [Cucumis sativus] >XP_011660129.1 protein slowmo homolog [Cucumis sativus] >XP_011660130.1 protein slowmo homolog [Cucumis sativus] >XP_011660131.1 protein slowmo homolog [Cucumis sativus] >XP_031735993.1 protein slowmo homolog [Cucumis sativus] >XP_031735994.1 protein slowmo homolog [Cucumis sativus] >KGN66480.1 hypothetical protein Csa_007515 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSI+IKPLSALASMAEKVEQRCAE+FVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG  I
Sbjct: 181 SGFAI 185

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BLAST of Carg16947 vs. ExPASy Swiss-Prot
Match: Q54G07 (Protein slowmo homolog OS=Dictyostelium discoideum OX=44689 GN=slmo PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.5e-23
Identity = 58/163 (35.58%), Postives = 92/163 (56.44%), Query Frame = 0


Query: 8   EYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPG 67
           ++TYKH W   + AS+RK+  PE       IL +D L++++DP +G L  T+ I      
Sbjct: 8   KHTYKHLWSDASTASFRKYPSPER----PDILSIDILSKEIDPTTGVLKCTKLIICKGNT 67

Query: 68  PWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHPDNPNGWT 127
           P +++ I+G   C   E T VD  ++ M L T+N++    + V E   Y+ HPDN   WT
Sbjct: 68  PSWLKSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVDEVCTYEQHPDNEE-WT 127

Query: 128 ICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVME 171
           +  QE ++     S++  +A K+E  C +RFV N+ KGR++ME
Sbjct: 128 LFTQEATV----TSSIFGVARKMEAFCLDRFVANAGKGRKIME 161

[Close]

BLAST of Carg16947 vs. ExPASy Swiss-Prot
Match: Q4R5S9 (PRELI domain containing protein 3B OS=Macaca fascicularis OX=9541 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20
Identity = 61/185 (32.97%), Postives = 102/185 (55.14%), Query Frame = 0


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P+  TI  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPDK-TILTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 175

Query: 182 SSGLT 185
              LT
Sbjct: 181 IEELT 175

[Close]

BLAST of Carg16947 vs. ExPASy Swiss-Prot
Match: Q58DB0 (PRELI domain containing protein 3B OS=Bos taurus OX=9913 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-20
Identity = 62/185 (33.51%), Postives = 100/185 (54.05%), Query Frame = 0


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ I+G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSIIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P   TI  QE  I +K +    S+   +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TILTQEAIITVKGV----SLGSYLEGLMASTISSNANKGREAMEWVIHKLNAE 175

Query: 182 SSGLT 185
              LT
Sbjct: 181 IEELT 175

[Close]

BLAST of Carg16947 vs. ExPASy Swiss-Prot
Match: Q9Y3B1 (PRELI domain containing protein 3B OS=Homo sapiens OX=9606 GN=PRELID3B PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-20
Identity = 60/185 (32.43%), Postives = 101/185 (54.59%), Query Frame = 0


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P   T+  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 175

Query: 182 SSGLT 185
              LT
Sbjct: 181 IEELT 175

[Close]

BLAST of Carg16947 vs. ExPASy Swiss-Prot
Match: Q6TMK8 (PRELI domain containing protein 3B OS=Cricetulus griseus OX=10029 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20
Identity = 60/184 (32.61%), Postives = 100/184 (54.35%), Query Frame = 0


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R VDP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWEMVTTAAMQKYPNPMN----PSVVGVDVLDRHVDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVKKTMELKSTNISFTNMVSVDERLTYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P   T+  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNANKGREAMEWVIHKLNAE 174

Query: 182 SSGL 184
              L
Sbjct: 181 IEDL 174

[Close]

BLAST of Carg16947 vs. ExPASy TrEMBL
Match: A0A6J1JKY7 (protein slowmo homolog OS=Cucurbita maxima OX=3661 GN=LOC111485522 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.3e-104
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SGLTI
Sbjct: 181 SGLTI 185

[Close]

BLAST of Carg16947 vs. ExPASy TrEMBL
Match: A0A6J1HA28 (protein slowmo homolog OS=Cucurbita moschata OX=3662 GN=LOC111461476 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.3e-104
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SGLTI
Sbjct: 181 SGLTI 185

[Close]

BLAST of Carg16947 vs. ExPASy TrEMBL
Match: A0A5D3D5P3 (Protein slowmo-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00340 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Carg16947 vs. ExPASy TrEMBL
Match: A0A1S3BPV8 (protein slowmo homolog OS=Cucumis melo OX=3656 GN=LOC103492037 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Carg16947 vs. ExPASy TrEMBL
Match: A0A6J1DMT6 (protein slowmo homolog OS=Momordica charantia OX=3673 GN=LOC111021459 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97
Identity = 172/185 (92.97%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVT ASWRKF DPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHC+ES++VDA SQSMQL+TRNISLQ+FIEVVEKIRYDPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCIESSMVDAQSQSMQLSTRNISLQRFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAE+FVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+TI
Sbjct: 181 SGITI 185

[Close]

BLAST of Carg16947 vs. TAIR 10
Match: AT5G13070.1 (MSF1-like family protein )

HSP 1 Score: 322.0 bits (824), Expect = 3.1e-88
Identity = 147/181 (81.22%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AY QE+ YKHPWERV+ ASWRKF DPENKR LSHILEVDTLNRK+D E+GKL+TTRA
Sbjct: 1   MVKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKLDTETGKLHTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           +TIHAPGPWF+ +I+GQDICHCVESTVVD  S+SMQLTT+NISL+KFIEV E+IRYDPHP
Sbjct: 61  LTIHAPGPWFLHRIIGQDICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEERIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP+ WT+C QETSIRIKPLSALASMAEKVEQ+CAE+F+QNS KGREVMERICKY+EAES
Sbjct: 121 DNPSAWTVCSQETSIRIKPLSALASMAEKVEQKCAEKFMQNSAKGREVMERICKYMEAES 180

Query: 181 S 182
           +
Sbjct: 181 A 181

The following BLAST results are available for this feature:

BLAST of Carg16947 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960775.1	1.1e-103	100.00	protein slowmo homolog [Cucurbita moschata] >XP_022988219.1 protein slowmo homol...	[more]
XP_038880305.1	2.0e-97	93.51	protein slowmo homolog [Benincasa hispida] >XP_038880306.1 protein slowmo homolo...	[more]
XP_008450435.1	2.6e-97	94.05	PREDICTED: protein slowmo homolog [Cucumis melo] >TYK18842.1 protein slowmo-like...	[more]
XP_022154131.1	3.4e-97	92.97	protein slowmo homolog [Momordica charantia]	[more]
XP_011660128.1	1.7e-96	92.97	protein slowmo homolog [Cucumis sativus] >XP_011660129.1 protein slowmo homolog ...	[more]

BLAST of Carg16947 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54G07	4.5e-23	35.58	Protein slowmo homolog OS=Dictyostelium discoideum OX=44689 GN=slmo PE=3 SV=1	[more]
Q4R5S9	2.1e-20	32.97	PRELI domain containing protein 3B OS=Macaca fascicularis OX=9541 GN=PRELID3B PE...	[more]
Q58DB0	2.7e-20	33.51	PRELI domain containing protein 3B OS=Bos taurus OX=9913 GN=PRELID3B PE=2 SV=1	[more]
Q9Y3B1	3.5e-20	32.43	PRELI domain containing protein 3B OS=Homo sapiens OX=9606 GN=PRELID3B PE=1 SV=2	[more]
Q6TMK8	6.0e-20	32.61	PRELI domain containing protein 3B OS=Cricetulus griseus OX=10029 GN=PRELID3B PE...	[more]

BLAST of Carg16947 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKY7	5.3e-104	100.00	protein slowmo homolog OS=Cucurbita maxima OX=3661 GN=LOC111485522 PE=4 SV=1	[more]
A0A6J1HA28	5.3e-104	100.00	protein slowmo homolog OS=Cucurbita moschata OX=3662 GN=LOC111461476 PE=4 SV=1	[more]
A0A5D3D5P3	1.3e-97	94.05	Protein slowmo-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BPV8	1.3e-97	94.05	protein slowmo homolog OS=Cucumis melo OX=3656 GN=LOC103492037 PE=4 SV=1	[more]
A0A6J1DMT6	1.7e-97	92.97	protein slowmo homolog OS=Momordica charantia OX=3673 GN=LOC111021459 PE=4 SV=1	[more]

BLAST of Carg16947 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13070.1	3.1e-88	81.22	MSF1-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006797	PRELI/MSF1 domain	PFAM	PF04707	PRELI	coord: 18..178 e-value: 1.9E-47 score: 161.0
IPR006797	PRELI/MSF1 domain	PROSITE	PS50904	PRELI_MSF1	coord: 2..181 score: 42.21743
None	No IPR available	PANTHER	PTHR11158:SF34	PRELI DOMAIN CONTAINING PROTEIN 3A-LIKE ISOFORM X1	coord: 1..182
IPR037365	Slowmo/Ups family	PANTHER	PTHR11158	MSF1/PX19 RELATED	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16947-RA	Carg16947-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0120009	intermembrane lipid transfer
biological_process	GO:0015914	phospholipid transport
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:1990050	phosphatidic acid transfer activity