Carg16944 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16944
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr10: 4845734 .. 4846052 (+)
RNA-Seq ExpressionCarg16944
SyntenyCarg16944
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGAAAGGTCGAATTTCAGTGTCAGCATTGAAGAGGCCGAGTTTATCCTTTTCGTCGATTGCTCTGGCGTGAATGTTTCCACTGCATCCACCTCGTTTTATTCGTTGTTAATGATTACTGGTAAGAGTTTTATGGACAGCTGAACGTTCCATGTGAGCAAACGCGAACAGACGGATATGTTCTTAGTGTTTCATTTCAGGTTTGATTCTTATCGATTTTGGGCTCGTGGGTATTGGGGTGTTCTTCTTGTTGTTTCATTTTGATCATTGATTTGCTTTCTCAGCTGCTCTTGGGTCTGAGAATTTGATCGTGTTCTGA

mRNA sequence

TGGGAAAGGTCGAATTTCAGTGTCAGCATTGAAGAGGCCGAGTTTATCCTTTTCGTCGATTGCTCTGGCGTGAATGTTTCCACTGCATCCACCTCGTTTTATTCGTTGTTAATGATTACTGCTGCTCTTGGGTCTGAGAATTTGATCGTGTTCTGA

Coding sequence (CDS)

TGGGAAAGGTCGAATTTCAGTGTCAGCATTGAAGAGGCCGAGTTTATCCTTTTCGTCGATTGCTCTGGCGTGAATGTTTCCACTGCATCCACCTCGTTTTATTCGTTGTTAATGATTACTGCTGCTCTTGGGTCTGAGAATTTGATCGTGTTCTGA

Protein sequence

WERSNFSVSIEEAEFILFVDCSGVNVSTASTSFYSLLMITAALGSENLIVF
Homology
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BLAST of Carg16944 vs. NCBI nr
Match: KAG7023857.1 (hypothetical protein SDJN02_14884, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  WERSNFSVSIEEAEFILFVDCSGVNVSTASTSFYSLLMITAALGSENLIVF 52
          WERSNFSVSIEEAEFILFVDCSGVNVSTASTSFYSLLMITAALGSENLIVF
Sbjct: 1  WERSNFSVSIEEAEFILFVDCSGVNVSTASTSFYSLLMITAALGSENLIVF 51

The following BLAST results are available for this feature:
BLAST of Carg16944 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7023857.12.2e-17100.00hypothetical protein SDJN02_14884, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg16944 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg16944 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg16944 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16944-RACarg16944-RAmRNA