Carg16918 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16918
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	tetraspanin-20-like
Location	Carg_Chr19: 904021 .. 908482 (-)
RNA-Seq Expression	Carg16918
Synteny	Carg16918

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGCACTTGCTGTCATGTTTCTCTTGCGTTTATCATCAAATGCTTCAATTTTCTTCAGGCTTTTGTTGGGGTTTCGATTATAGTTTATTCGGCATGGATGCTTGATCGCTGGAACCACCATCTCCCTGTTTCTCCTCCGCCGTCTCCTTTACCGGCTTTGGCTCCTTCTCCGGCTTCGTTCTATTTAAGTTCTGAATCCGTCGCTGTTGCCGATCGAATCATGCCAATCAATTTAGCTGCTGATTCGATTCCCGGATTCGATACGGAATTAGAAATTGATTTGAACGCCTTCAAGCTTCCAGCTCCTTGGTGAGATTTTCGATTCGTTTGTGTTTCTTGCGACTCTTAATTAGGGCAGATTTATGATTTGGGGAAGTTTTTGCAATCACTCAACTTCGTATTGCATTTTATACTGTTTGAAATTTAGTTCGATTGTTTGGAGGAATTTAAGCTTCTCTGGCAGCAATTTTACTCTTGATTGTTGGGGATTTGATGGATCATGGATGGGACTCTTCTTTGAGAAGTGAACTAAACATGGATTTTGCTGAAGTCTTCTACCGATTGATTCTCTTTCTGTAAATTAATTTGGTAGTTCTGAAGTCTTTTTATGCTGAGTTATCATATGATTATTGCTGCATATTGGTAATTATGTCGTGAAGTGTTGGATTCAATAGGTTTATAAGATTGTTGAATTGTTGTTTTCTCTTTGGTGGCAGGTTCATCTACTCATTCATGGGATTGGGCATCTTGTTGTGTTGTATTGCTTTAGTTGGCTGTATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTCTGTTTCGTATCCTATGATTTGTAGTTTATTACAGCTTGTTTTTCAGTTCTATATATTGCCTTTTTCCCCTGAAAAGTTACTGTTTTGGGAATTTGAAATACTTCGATGCTGAATTTATCTTTGTTCTTGAGTTATACGAGTGAAAATCATACCCCATGTAGGTTAATTCCCAAGGACCAATAGAAACTTGATATAGGAATTGAAGTTATCTTTGTTCTTGAGTTATACAAGTGAAAATCAGTAGTCGAATTCCCAAGGACCAATACAAACTTGATATAGGAACTGAAGTTATCTTTGTTCTTGAGTTATACGAGTGAAAATCATACCCCACGTAGTAGAATTCCCAAGGACCAATAGAAACTTGATATAGGAGCTGAAGTTATCTTTGTTCTCGAGTTATACGAGTGAAAATCATACCCCACGTAGTCCAATTCCTGAGACCAATAGAAACTTGATATAGGAGCTGAAGTTATCTTTGTTCTCGAGTTATACGAGTGAAAATCATACCCCACGTAGTCGAATTCCCAAGGACCAATAGAAACTTGATATAGGAGCTGAAGTTATCTTTGTTCTTGAGTTATACGAGTGAAAATCATACCCCACGTAGTAGAATTCCCAAGGACCAGTAGAAACTTGATATAGGAGCTGAAGTTATCTTTGTTCTCGAGTTATACGAGTGAAAATCATACCCCACGTAGTCCAATTCCTGAGACCAATAGAAACTTGATATAGGAGCTGAAGTTATCTTTGTTCTCGAGTTATACGAGTGAAAATCATACCCCACGTAGTCGAATTCCCAAGGACAAATAGAAACTTGATATAGGAACTGAAGTTATCTTTGTTCTCGAGTTATATGAGTGAAAATCATACCCCACGTAGTCGAATTCCCAAGGACCAATAGAAACTTGATATAGGAACTGAAGTTATCTTTGTTCTCGAGTTATGCGAGTGAAAATCATACCTCACGTAGTCGAATTCCCAAGGACCAATAGAAACTTGATATAGGAACTGAAGTTATCTTTGTTCTCGAGTTATGCGAGTGAAAATCATACCTCACGTAGTCGAATTCCCAAGGACCAATAGAAACTTGATATAGGAACTGAAGTTATCTTTGTTCTCGAGTTATATGAGTGAAAATCATACCCCACGTAGTCGAATTCCCAAGGACCAATAGAAACTTGATATAGGAACTGAAGTTATCTTTGTTCTCGAGTTATGCGAGTGAAAATCATACCCCACGTAGTCCAATTCCTGAGACCAATACAAACTTTATATAGGAGCGCATGTGTTCGTGTGGAACATACTGATCCTAACAAATGGTTTGAAGAGTTGCATTCCAATGGCTTAATTCAAGCAAAATGTCCAAGGAAAGAGGATATACTTTCTTCCATTGTTCACTTCACCTTATTTCAACTACTTTTGGAACTCTTGATCCTTTGTGTTTACCCTTTTCCTTTGAAAAGGGAAGAACTTTGTTTCTTGACGAGTGAACATTTTTGTAACAGTCCAAGCCTACCGCTAGCGCTAGCAAATATTGTCCTCTTTGGGCTTTCTCTTTTGGACTTCTCCTCAAGATTTTAAAACGCGTCTGCTAGGGAAAGGTTTCTACACCCTTATAAAGAGTGTTTCGTTCTCCTCCCCAACCGACATGGGATCTCATCATTTCTATTTAGCATCTCTTTCCCTTAACCTAGCAATGGTAGTATAACATGCTTATAATGCTATTTATTCTCGTTGAAGTGGCTTTGGTGGCATTTATTGGCATCGATCGCCGGTGGGAAAAGGTATTGTTCTGCACTTGAAAGCAGATTTACTTACTCTATCAAAATATGTATTTACTTGAAAACAATGGTGCAGGATCTTCCGTTGGACCCAACTGGTGAATTGGAGGAACTTAGGCAATTCATTGAAGATAACATCGATCTATGCAAGTGGATCGGTATCATTGTGATTTCAACACAGGTAGAATAGACTGAAACTAATCATAAATCTTTCGTATGTTTCTGAATCCATTTCGTTTGTTTCTGAATCCATTTCGTGGTAGAATGTTAATGGGCGAAATTGTAGAAAATACCTCTGGACTTTGCCTTTTGTTTTAAAGACCTCCTATTTTTCGGTAGTTGCATGCCATTTGAGTAGAAATCGTATAGAATATTGGATGGAAATTACGACGTGTGGCAAGGACGTGGAACGACGTGGCGGTGTTTTTGGGTCCCAATTTCCATTTGGTATACTAGGGTATCATTCTAGGTTCCAATTTTTGTTCACCATTCTAACGTCTTTCTACTCTAATGGTTAAAAAAAAAAAATAACGGTATTCCTTAAACGAATGACAAAGTTCAATCTAATATTCATTTGAGTGATACCGGATTATAATTATCTGGTGGTTCGTGTTTCTTCTGATGGTGGCAAATGTTGCTCGTTTATGCGATTTACTTGAAGTTTATATAGTGTATTCTCTCAGGCACGTTTTGATTATACTTGTTATGACCATTCACTTGATTCTTTAATGCAATCTCTCAGGCATTGTCTCTACTGCTAGCGATTATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTATGATACAGAAGAGGAGATTGGTGCTCGAGATAGAACTCGGGAGCCATTGCTTAATCCACCAGGAAATCAAGCTTCTGGTGCTCATTTTGACCTTTGGGGCGCTCGAATGAGAGAGAAGGTATCGTGTTCTTGCACTGATCTCTTTTAGGGAAGGGAAAGAAGATAAAAAAAATTACACAAAATCTGTTACTAAATGTAGTTTCCATCCTATTCATTTGCAGTATGGATTGAACAACAGTGACAGATACAATTCATCGAATCAAATCTCGTAAACCGAAGAGAAAACTCAAGCAGTCGAAACAGAAAGCCTTCCTAGCGCAGATCAGAGGAACCTCGACGTTACCAGATTCTCTCTTTGCTACATCGTGTTATTTCAACCGAAGGTCGGAACTGTTCTCCACAATGTGGTGTGTGATTTGATTTTGGTTGGTCTTATAGGATAGATTACAATCAGGTTTGAGAAAGAACGGAAGGTCATGTGATGGCGTGTGTGTGATGAGATGAGCATATCATCAAAGTTGAGGAATTTGAATGAGTTCTATTTTAACATTCTAATCTTGTAAACTGAGTGAGGTCTGATGTAATGGATTATTTGTAGAAACCTTGTTTGAAGGGTCATTACTATCACGGCTCCCTTAGTATACACTGCTCAGAGAAATAGATATACCTGAAAGGACATTTAGAAAGGACATTTAGAAAGGACATTTAGAAAGGCTGTTACAGGCTGCAGCTAATCAAGTTTATATATTATGTATACAAACAATTTAACCTAACTATTATTATCAAGGAAGACTCAAATACTTTAGGCAATCACGTGTCTGCTTAGTCACTCCCAAAATGGATAGAGAATGATGAGTCCACTGTCAATCAATGGATCCCACACCCCTTTTCATAAAGCCCTACAATCTAATGGATACTTTGAGATCGCATCCCAATATTTTTTTATAAGAGTGCGGAAATCGAAAATCTCTCCCTAACCGCAATTTTTAAGAATCTTGAGAGAAAGCAATCTTGAGGGAAATCTCGAAAAAAAAAAACCCTAAAAATATTTTTTATAAAAGT

mRNA sequence

ATGGCTCGCACTTGCTGTCATGTTTCTCTTGCGTTTATCATCAAATGCTTCAATTTTCTTCAGGCTTTTGTTGGGGTTTCGATTATAGTTTATTCGGCATGGATGCTTGATCGCTGGAACCACCATCTCCCTGTTTCTCCTCCGCCGTCTCCTTTACCGGCTTTGGCTCCTTCTCCGGCTTCGTTCTATTTAAGTTCTGAATCCGTCGCTGTTGCCGATCGAATCATGCCAATCAATTTAGCTGCTGATTCGATTCCCGGATTCGATACGGAATTAGAAATTGATTTGAACGCCTTCAAGCTTCCAGCTCCTTGGTTCATCTACTCATTCATGGGATTGGGCATCTTGTTGTGTTGTATTGCTTTAGTTGGCTGTATTGCAGCTGAAGCAATAATGGCTTTGGTGGCATTTATTGGCATCGATCGCCGGTGGGAAAAGGATCTTCCGTTGGACCCAACTGGTGAATTGGAGGAACTTAGGCAATTCATTGAAGATAACATCGATCTATGCAAGTGGATCGGTATCATTGTGATTTCAACACAGGCATTGTCTCTACTGCTAGCGATTATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTATGATACAGAAGAGGAGATTGGTGCTCGAGATAGAACTCGGGAGCCATTGCTTAATCCACCAGGAAATCAAGCTTCTGGTGCTCATTTTGACCTTTGGGGCGCTCGAATGAGAGAGAAGTATGGATTGAACAACAGTGACAGATACAATTCATCGAATCAAATCTCGTAAACCGAAGAGAAAACTCAAGCAGTCGAAACAGAAAGCCTTCCTAGCGCAGATCAGAGGAACCTCGACGTTACCAGATTCTCTCTTTGCTACATCGTGTTATTTCAACCGAAGGTCGGAACTGTTCTCCACAATGTGGTGTGTGATTTGATTTTGGTTGGTCTTATAGGATAGATTACAATCAGGTTTGAGAAAGAACGGAAGGTCATGTGATGGCGTGTGTGTGATGAGATGAGCATATCATCAAAGTTGAGGAATTTGAATGAGTTCTATTTTAACATTCTAATCTTGTAAACTGAGTGAGGTCTGATGTAATGGATTATTTGTAGAAACCTTGTTTGAAGGGTCATTACTATCACGGCTCCCTTAGTATACACTGCTCAGAGAAATAGATATACCTGAAAGGACATTTAGAAAGGACATTTAGAAAGGACATTTAGAAAGGCTGTTACAGGCTGCAGCTAATCAAGTTTATATATTATGTATACAAACAATTTAACCTAACTATTATTATCAAGGAAGACTCAAATACTTTAGGCAATCACGTGTCTGCTTAGTCACTCCCAAAATGGATAGAGAATGATGAGTCCACTGTCAATCAATGGATCCCACACCCCTTTTCATAAAGCCCTACAATCTAATGGATACTTTGAGATCGCATCCCAATATTTTTTTATAAGAGTGCGGAAATCGAAAATCTCTCCCTAACCGCAATTTTTAAGAATCTTGAGAGAAAGCAATCTTGAGGGAAATCTCGAAAAAAAAAAACCCTAAAAATATTTTTTATAAAAGT

Coding sequence (CDS)

ATGGCTCGCACTTGCTGTCATGTTTCTCTTGCGTTTATCATCAAATGCTTCAATTTTCTTCAGGCTTTTGTTGGGGTTTCGATTATAGTTTATTCGGCATGGATGCTTGATCGCTGGAACCACCATCTCCCTGTTTCTCCTCCGCCGTCTCCTTTACCGGCTTTGGCTCCTTCTCCGGCTTCGTTCTATTTAAGTTCTGAATCCGTCGCTGTTGCCGATCGAATCATGCCAATCAATTTAGCTGCTGATTCGATTCCCGGATTCGATACGGAATTAGAAATTGATTTGAACGCCTTCAAGCTTCCAGCTCCTTGGTTCATCTACTCATTCATGGGATTGGGCATCTTGTTGTGTTGTATTGCTTTAGTTGGCTGTATTGCAGCTGAAGCAATAATGGCTTTGGTGGCATTTATTGGCATCGATCGCCGGTGGGAAAAGGATCTTCCGTTGGACCCAACTGGTGAATTGGAGGAACTTAGGCAATTCATTGAAGATAACATCGATCTATGCAAGTGGATCGGTATCATTGTGATTTCAACACAGGCATTGTCTCTACTGCTAGCGATTATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTATGATACAGAAGAGGAGATTGGTGCTCGAGATAGAACTCGGGAGCCATTGCTTAATCCACCAGGAAATCAAGCTTCTGGTGCTCATTTTGACCTTTGGGGCGCTCGAATGAGAGAGAAGTATGGATTGAACAACAGTGACAGATACAATTCATCGAATCAAATCTCGTAA

Protein sequence

MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPASFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCIALVGCIAAEAIMALVAFIGIDRRWEKDLPLDPTGELEELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNPPGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS

Homology

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BLAST of Carg16918 vs. NCBI nr
Match: KAG7011308.1 (Tetraspanin-18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 511.1 bits (1315), Expect = 5.4e-141
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
           SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI
Sbjct: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120

Query: 121 ALVGCIAAEAIMALVAFIGIDRRWEKDLPLDPTGELEELRQFIEDNIDLCKWIGIIVIST 180
           ALVGCIAAEAIMALVAFIGIDRRWEKDLPLDPTGELEELRQFIEDNIDLCKWIGIIVIST
Sbjct: 121 ALVGCIAAEAIMALVAFIGIDRRWEKDLPLDPTGELEELRQFIEDNIDLCKWIGIIVIST 180

Query: 181 QALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNPPGNQASGAHFDLWGARMRE 240
           QALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNPPGNQASGAHFDLWGARMRE
Sbjct: 181 QALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNPPGNQASGAHFDLWGARMRE 240

Query: 241 KYGLNNSDRYNSSNQIS 258
           KYGLNNSDRYNSSNQIS
Sbjct: 241 KYGLNNSDRYNSSNQIS 257

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BLAST of Carg16918 vs. NCBI nr
Match: KAG6571566.1 (Tetraspanin-18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 498.0 bits (1281), Expect = 4.7e-137
Identity = 256/276 (92.75%), Postives = 257/276 (93.12%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
           SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI
Sbjct: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120

Query: 121 ALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
           ALVGCIAAEAI                   +ALVAFIGIDRRWEKDLPLDPTGELEELRQ
Sbjct: 121 ALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELEELRQ 180

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240
           FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP
Sbjct: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240

Query: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 258
           PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS
Sbjct: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 276

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BLAST of Carg16918 vs. NCBI nr
Match: XP_022967314.1 (tetraspanin-20-like [Cucurbita maxima])

HSP 1 Score: 491.9 bits (1265), Expect = 3.4e-135
Identity = 253/276 (91.67%), Postives = 254/276 (92.03%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
           SFYLSSESVAVADRIMPINLAAD  PGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI
Sbjct: 61  SFYLSSESVAVADRIMPINLAADLTPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120

Query: 121 ALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
           ALVGCIAAEAI                   +ALVAFIGIDRRWEKDLPLDPTGELEELRQ
Sbjct: 121 ALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELEELRQ 180

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240
           FIEDNIDLCKWIGI VISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP
Sbjct: 181 FIEDNIDLCKWIGITVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240

Query: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 258
           PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS
Sbjct: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 276

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BLAST of Carg16918 vs. NCBI nr
Match: XP_022963503.1 (tetraspanin-20-like [Cucurbita moschata])

HSP 1 Score: 491.5 bits (1264), Expect = 4.4e-135
Identity = 252/276 (91.30%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
           SFYLSSESVAVADRIMPINLAAD IPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI
Sbjct: 61  SFYLSSESVAVADRIMPINLAADLIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120

Query: 121 ALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
           ALVGCIAAEAI                   +ALVAFIGIDRRWEKDLPLDPTGEL+ELRQ
Sbjct: 121 ALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELKELRQ 180

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240
           FIEDNID+CKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIG RDRTREPLLNP
Sbjct: 181 FIEDNIDVCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGVRDRTREPLLNP 240

Query: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 258
           PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS
Sbjct: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 276

[Close]

BLAST of Carg16918 vs. NCBI nr
Match: XP_023554769.1 (tetraspanin-20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.3 bits (1261), Expect = 9.8e-135
Identity = 251/276 (90.94%), Postives = 256/276 (92.75%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAW+LDRWNHHLPVSPPPSPLPALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWILDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
           SFYLSSESVAVADRIMPINLAAD IPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI
Sbjct: 61  SFYLSSESVAVADRIMPINLAADLIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120

Query: 121 ALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
           ALVGCIAAEAI                   +ALVAFIGIDRRWEKDLPLDPTGELEELR+
Sbjct: 121 ALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELEELRR 180

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240
           FIEDNID+CKWIGIIVISTQALSLLLAIILRSMVSTR+TEYDTEEEIGARDRTREPLLNP
Sbjct: 181 FIEDNIDVCKWIGIIVISTQALSLLLAIILRSMVSTRRTEYDTEEEIGARDRTREPLLNP 240

Query: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 258
           PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS
Sbjct: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 276

[Close]

BLAST of Carg16918 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.5e-64
Identity = 140/281 (49.82%), Postives = 181/281 (64.41%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           M   CCHVS A I+K  NFLQAF+G+SII+YS WMLD++NHH+PV PPPS  PA A SP 
Sbjct: 1   MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPA-ASSPD 60

Query: 61  SFYLSSESV----AVADRIM-PINLAADSIPGF-DTELEIDLNAFKLPAPWFIYSFMGLG 120
           S Y  S S+    +V+D +  PI+  +  + G    +   +L +  LPAPWFIY FM +G
Sbjct: 61  SSYSFSNSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIG 120

Query: 121 ILLCCIALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGE 180
           IL+C + ++G IAAEAI                    ALV FI IDR WEKDLP DPTGE
Sbjct: 121 ILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGE 180

Query: 181 LEELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEI-GARDRT 240
           L  LR FIE+NID+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D E++      R 
Sbjct: 181 LNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRA 240

Query: 241 REPLLNPPGNQAS--GAHFDLWGARMREKYGLNNSDRYNSS 254
           R+ LL P  NQ S   ++ D W +R+REKYGL NS  +  S
Sbjct: 241 RDNLLGPQANQTSSGSSNIDNWRSRIREKYGLINSQSHTPS 280

[Close]

BLAST of Carg16918 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.4e-61
Identity = 137/274 (50.00%), Postives = 172/274 (62.77%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           M R CCHVS A  +K  NF+QAF+GVSII+YS WML  ++ HLPV PPPS     + S  
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPS----ASSSSG 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFD-TELEIDLNAFKLPAPWFIYSFMGLGILLCC 120
           +   +S S  + +   PI+  A  I G +  +   +L +  LPAPWFIYSFM +GIL+C 
Sbjct: 61  TEIATSVSEPLKN---PIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCI 120

Query: 121 IALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELR 180
           +  +G IAAEAI                    ALVA+I IDR WEKDLP DPTGEL  LR
Sbjct: 121 VTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLR 180

Query: 181 QFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEE-EIGARDRTREPLL 240
            FIE+NID+CKW+GI V++ Q LSLLLA++LR+MVST K E D EE +   R RT +PLL
Sbjct: 181 AFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDPLL 240

Query: 241 NPPGNQ--ASGAHFDLWGARMREKYGLNNSDRYN 252
            P GNQ  A  +  + W +R+REKYGLN S   N
Sbjct: 241 GPQGNQAPAGSSKIENWSSRIREKYGLNQSPPVN 267

[Close]

BLAST of Carg16918 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 68/262 (25.95%), Postives = 113/262 (43.13%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           + R+C    L  ++K  N L   VG+++I+Y+ W++ +W   +                 
Sbjct: 4   IVRSC----LQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQM----------------- 63

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
                                  ++P  D++          P PWFIYSF+GLG +LC +
Sbjct: 64  ----------------------GNLPFADSD---------HPVPWFIYSFLGLGAILCVV 123

Query: 121 ALVGCIAAEAIM-------------------ALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
              G IAAE +                     +VA I ++R W+KD P DP+G   +  +
Sbjct: 124 TCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSK 183

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE-----IGARDRTRE 239
           FIE N  +CKWIG+ ++  Q LS+L+A++L+++       YD+++E     +      R+
Sbjct: 184 FIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQ 213

[Close]

BLAST of Carg16918 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-17
Identity = 74/281 (26.33%), Postives = 125/281 (44.48%), Query Frame = 0


Query: 6   CHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPASFYLS 65
           C   L  ++K  NFL A  G+ +I Y  ++   +               +  +  +F L+
Sbjct: 3   CRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKR-------------VTDNSVTFDLT 62

Query: 66  SESVAVADRIMPINLAADSIPGFDTELEIDLNAF-KLPAPWFIYSFMGLGILLCCIALVG 125
           +   +      PI +A          + +  N F  LP  WFIY F+G+G+ L  I+  G
Sbjct: 63  NGDQSYVSFGRPILMA----------VSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCG 122

Query: 126 CI--AAEAIMAL-----------------VAFIGIDRRWEKDLPLDPTGELEELRQFIED 185
           C+   + ++  L                  AFI  D  W  +LP D TG  + +  F+ +
Sbjct: 123 CVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRE 182

Query: 186 NIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE-IGARDRTREPLLNPPGN 245
           N  + +W+ +  +  +AL  LLA+++R+  +    EYD+++E +  R + R+P +N    
Sbjct: 183 NWKIVRWVALGAVVFEALLFLLALMVRA--ANTPAEYDSDDEYLAPRQQIRQPFINRQAA 242

Query: 246 QASG-----------AHFDLWGARMREKYGLNNSD-RYNSS 254
             +G           +  D W ARMREKYGL+ S+  YN S
Sbjct: 243 PVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPS 258

[Close]

BLAST of Carg16918 vs. ExPASy TrEMBL
Match: A0A6J1HWE7 (tetraspanin-20-like OS=Cucurbita maxima OX=3661 GN=LOC111466873 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135
Identity = 253/276 (91.67%), Postives = 254/276 (92.03%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
           SFYLSSESVAVADRIMPINLAAD  PGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI
Sbjct: 61  SFYLSSESVAVADRIMPINLAADLTPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120

Query: 121 ALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
           ALVGCIAAEAI                   +ALVAFIGIDRRWEKDLPLDPTGELEELRQ
Sbjct: 121 ALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELEELRQ 180

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240
           FIEDNIDLCKWIGI VISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP
Sbjct: 181 FIEDNIDLCKWIGITVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240

Query: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 258
           PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS
Sbjct: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 276

[Close]

BLAST of Carg16918 vs. ExPASy TrEMBL
Match: A0A6J1HHZ4 (tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111463811 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 252/276 (91.30%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
           SFYLSSESVAVADRIMPINLAAD IPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI
Sbjct: 61  SFYLSSESVAVADRIMPINLAADLIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120

Query: 121 ALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
           ALVGCIAAEAI                   +ALVAFIGIDRRWEKDLPLDPTGEL+ELRQ
Sbjct: 121 ALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELKELRQ 180

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPLLNP 240
           FIEDNID+CKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIG RDRTREPLLNP
Sbjct: 181 FIEDNIDVCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGVRDRTREPLLNP 240

Query: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 258
           PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS
Sbjct: 241 PGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 276

[Close]

BLAST of Carg16918 vs. ExPASy TrEMBL
Match: A0A0A0L8P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622440 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 224/281 (79.72%), Postives = 240/281 (85.41%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           MARTCCHVSLAFI+KCFNFLQAFVGVSIIVYSAWMLDRWNHH+PVSPPP P+PALAPSPA
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPP-PVPALAPSPA 60

Query: 61  ----SFYLSSESVAVADRIMPINLAADSIPGFD-TELEIDLNAFKLPAPWFIYSFMGLGI 120
               SFYL+SESV VADRI  ++LAAD IP FD  EL+++LNAFKLPAPWFIYSFMG G+
Sbjct: 61  ASSVSFYLNSESVTVADRITAMDLAADFIPEFDREELKLELNAFKLPAPWFIYSFMGFGV 120

Query: 121 LLCCIALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGEL 180
           LLCCI LVGCIAAEAI                   + LVAFI IDR WEKDLPLDPTGEL
Sbjct: 121 LLCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVGLVAFIAIDRSWEKDLPLDPTGEL 180

Query: 181 EELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTRE 240
           +ELR FIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEE+G RDRTRE
Sbjct: 181 DELRHFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTRE 240

Query: 241 PLLNPPGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQIS 258
           PLLNPP NQA+GAHFDLWGARMREKYGLNNSDRYNSSNQ S
Sbjct: 241 PLLNPPANQAAGAHFDLWGARMREKYGLNNSDRYNSSNQSS 280

[Close]

BLAST of Carg16918 vs. ExPASy TrEMBL
Match: A0A5A7T8U7 (Tetraspanin-18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00590 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.8e-116
Identity = 222/279 (79.57%), Postives = 240/279 (86.02%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           M RTCCHVSLAFI+KCFNFLQAFVGVSIIVYSAWMLDRWNHH+PVSPPP P+PALAPSPA
Sbjct: 1   MDRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPP-PVPALAPSPA 60

Query: 61  ----SFYLSSESVAVADRIMPINLAADSIPGFD-TELEIDLNAFKLPAPWFIYSFMGLGI 120
               SFYL+SESV VADRI  +++AAD IP F+  EL+++LNAFKLPAPWFIYSFMG G+
Sbjct: 61  ASSVSFYLNSESVTVADRITAMDIAADFIPEFNMEELKLELNAFKLPAPWFIYSFMGFGV 120

Query: 121 LLCCIALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGEL 180
           LLCCI LVGCIAAEAI                   +ALVAFI IDRRWEKDLPLDPTGEL
Sbjct: 121 LLCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVALVAFIAIDRRWEKDLPLDPTGEL 180

Query: 181 EELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTRE 240
           +ELRQFIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEE+G RDRTRE
Sbjct: 181 DELRQFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTRE 240

Query: 241 PLLNPPGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQ 256
           PLLNPP NQA+GAHFDLWGARMREKYG NNSDRYNSSNQ
Sbjct: 241 PLLNPPANQAAGAHFDLWGARMREKYGFNNSDRYNSSNQ 278

[Close]

BLAST of Carg16918 vs. ExPASy TrEMBL
Match: A0A1S3BH71 (tetraspanin-18 OS=Cucumis melo OX=3656 GN=LOC103489821 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.8e-116
Identity = 222/279 (79.57%), Postives = 240/279 (86.02%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           M RTCCHVSLAFI+KCFNFLQAFVGVSIIVYSAWMLDRWNHH+PVSPPP P+PALAPSPA
Sbjct: 1   MDRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPP-PVPALAPSPA 60

Query: 61  ----SFYLSSESVAVADRIMPINLAADSIPGFD-TELEIDLNAFKLPAPWFIYSFMGLGI 120
               SFYL+SESV VADRI  +++AAD IP F+  EL+++LNAFKLPAPWFIYSFMG G+
Sbjct: 61  ASSVSFYLNSESVTVADRITAMDIAADFIPEFNMEELKLELNAFKLPAPWFIYSFMGFGV 120

Query: 121 LLCCIALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGEL 180
           LLCCI LVGCIAAEAI                   +ALVAFI IDRRWEKDLPLDPTGEL
Sbjct: 121 LLCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVALVAFIAIDRRWEKDLPLDPTGEL 180

Query: 181 EELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTRE 240
           +ELRQFIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEE+G RDRTRE
Sbjct: 181 DELRQFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTRE 240

Query: 241 PLLNPPGNQASGAHFDLWGARMREKYGLNNSDRYNSSNQ 256
           PLLNPP NQA+GAHFDLWGARMREKYG NNSDRYNSSNQ
Sbjct: 241 PLLNPPANQAAGAHFDLWGARMREKYGFNNSDRYNSSNQ 278

[Close]

BLAST of Carg16918 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-65
Identity = 140/281 (49.82%), Postives = 181/281 (64.41%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           M   CCHVS A I+K  NFLQAF+G+SII+YS WMLD++NHH+PV PPPS  PA A SP 
Sbjct: 1   MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPA-ASSPD 60

Query: 61  SFYLSSESV----AVADRIM-PINLAADSIPGF-DTELEIDLNAFKLPAPWFIYSFMGLG 120
           S Y  S S+    +V+D +  PI+  +  + G    +   +L +  LPAPWFIY FM +G
Sbjct: 61  SSYSFSNSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIG 120

Query: 121 ILLCCIALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGE 180
           IL+C + ++G IAAEAI                    ALV FI IDR WEKDLP DPTGE
Sbjct: 121 ILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGE 180

Query: 181 LEELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEI-GARDRT 240
           L  LR FIE+NID+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D E++      R 
Sbjct: 181 LNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRA 240

Query: 241 REPLLNPPGNQAS--GAHFDLWGARMREKYGLNNSDRYNSS 254
           R+ LL P  NQ S   ++ D W +R+REKYGL NS  +  S
Sbjct: 241 RDNLLGPQANQTSSGSSNIDNWRSRIREKYGLINSQSHTPS 280

[Close]

BLAST of Carg16918 vs. TAIR 10
Match: AT4G28770.2 (Tetraspanin family protein )

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-65
Identity = 140/281 (49.82%), Postives = 181/281 (64.41%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           M   CCHVS A I+K  NFLQAF+G+SII+YS WMLD++NHH+PV PPPS  PA A SP 
Sbjct: 45  MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPA-ASSPD 104

Query: 61  SFYLSSESV----AVADRIM-PINLAADSIPGF-DTELEIDLNAFKLPAPWFIYSFMGLG 120
           S Y  S S+    +V+D +  PI+  +  + G    +   +L +  LPAPWFIY FM +G
Sbjct: 105 SSYSFSNSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIG 164

Query: 121 ILLCCIALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGE 180
           IL+C + ++G IAAEAI                    ALV FI IDR WEKDLP DPTGE
Sbjct: 165 ILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGE 224

Query: 181 LEELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEI-GARDRT 240
           L  LR FIE+NID+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D E++      R 
Sbjct: 225 LNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRA 284

Query: 241 REPLLNPPGNQAS--GAHFDLWGARMREKYGLNNSDRYNSS 254
           R+ LL P  NQ S   ++ D W +R+REKYGL NS  +  S
Sbjct: 285 RDNLLGPQANQTSSGSSNIDNWRSRIREKYGLINSQSHTPS 324

[Close]

BLAST of Carg16918 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 236.1 bits (601), Expect = 3.1e-62
Identity = 137/274 (50.00%), Postives = 172/274 (62.77%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           M R CCHVS A  +K  NF+QAF+GVSII+YS WML  ++ HLPV PPPS     + S  
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPS----ASSSSG 60

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFD-TELEIDLNAFKLPAPWFIYSFMGLGILLCC 120
           +   +S S  + +   PI+  A  I G +  +   +L +  LPAPWFIYSFM +GIL+C 
Sbjct: 61  TEIATSVSEPLKN---PIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCI 120

Query: 121 IALVGCIAAEAI-------------------MALVAFIGIDRRWEKDLPLDPTGELEELR 180
           +  +G IAAEAI                    ALVA+I IDR WEKDLP DPTGEL  LR
Sbjct: 121 VTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLR 180

Query: 181 QFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEE-EIGARDRTREPLL 240
            FIE+NID+CKW+GI V++ Q LSLLLA++LR+MVST K E D EE +   R RT +PLL
Sbjct: 181 AFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDPLL 240

Query: 241 NPPGNQ--ASGAHFDLWGARMREKYGLNNSDRYN 252
            P GNQ  A  +  + W +R+REKYGLN S   N
Sbjct: 241 GPQGNQAPAGSSKIENWSSRIREKYGLNQSPPVN 267

[Close]

BLAST of Carg16918 vs. TAIR 10
Match: AT2G20740.1 (Tetraspanin family protein )

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-21
Identity = 68/262 (25.95%), Postives = 113/262 (43.13%), Query Frame = 0


Query: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60
           + R+C    L  ++K  N L   VG+++I+Y+ W++ +W   +                 
Sbjct: 4   IVRSC----LQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQM----------------- 63

Query: 61  SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILLCCI 120
                                  ++P  D++          P PWFIYSF+GLG +LC +
Sbjct: 64  ----------------------GNLPFADSD---------HPVPWFIYSFLGLGAILCVV 123

Query: 121 ALVGCIAAEAIM-------------------ALVAFIGIDRRWEKDLPLDPTGELEELRQ 180
              G IAAE +                     +VA I ++R W+KD P DP+G   +  +
Sbjct: 124 TCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSK 183

Query: 181 FIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE-----IGARDRTRE 239
           FIE N  +CKWIG+ ++  Q LS+L+A++L+++       YD+++E     +      R+
Sbjct: 184 FIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQ 213

[Close]

BLAST of Carg16918 vs. TAIR 10
Match: AT2G20740.2 (Tetraspanin family protein )

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-20
Identity = 54/161 (33.54%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 102 PAPWFIYSFMGLGILLCCIALVGCIAAEAIM-------------------ALVAFIGIDR 161
           P PWFIYSF+GLG +LC +   G IAAE +                     +VA I ++R
Sbjct: 12  PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNR 71

Query: 162 RWEKDLPLDPTGELEELRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEY 221
            W+KD P DP+G   +  +FIE N  +CKWIG+ ++  Q LS+L+A++L+++       Y
Sbjct: 72  DWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHY 131

Query: 222 DTEEE-----IGARDRTREPLLNPPGNQASGAHFDLWGARM 239
           D+++E     +      R+P     G    GA    W  R+
Sbjct: 132 DSDDEYNVSTVALLQDARQPPPYVVGEPMYGAKPGAWTVRL 172

The following BLAST results are available for this feature:

BLAST of Carg16918 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011308.1	5.4e-141	100.00	Tetraspanin-18, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571566.1	4.7e-137	92.75	Tetraspanin-18, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022967314.1	3.4e-135	91.67	tetraspanin-20-like [Cucurbita maxima]	[more]
XP_022963503.1	4.4e-135	91.30	tetraspanin-20-like [Cucurbita moschata]	[more]
XP_023554769.1	9.8e-135	90.94	tetraspanin-20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16918 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVU4	2.5e-64	49.82	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q93XY5	4.4e-61	50.00	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q940P5	1.1e-19	25.95	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]
Q9C5W7	1.0e-17	26.33	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]

BLAST of Carg16918 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWE7	1.6e-135	91.67	tetraspanin-20-like OS=Cucurbita maxima OX=3661 GN=LOC111466873 PE=4 SV=1	[more]
A0A6J1HHZ4	2.1e-135	91.30	tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111463811 PE=4 SV=1	[more]
A0A0A0L8P5	1.3e-116	79.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622440 PE=4 SV=1	[more]
A0A5A7T8U7	3.8e-116	79.57	Tetraspanin-18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00590...	[more]
A0A1S3BH71	3.8e-116	79.57	tetraspanin-18 OS=Cucumis melo OX=3656 GN=LOC103489821 PE=4 SV=1	[more]

BLAST of Carg16918 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28770.1	1.8e-65	49.82	Tetraspanin family protein	[more]
AT4G28770.2	1.8e-65	49.82	Tetraspanin family protein	[more]
AT2G20230.1	3.1e-62	50.00	Tetraspanin family protein	[more]
AT2G20740.1	7.8e-21	25.95	Tetraspanin family protein	[more]
AT2G20740.2	3.9e-20	33.54	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..227
None	No IPR available	PANTHER	PTHR19282:SF453	TETRASPANIN-20	coord: 3..131
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 133..230
None	No IPR available	PANTHER	PTHR19282:SF453	TETRASPANIN-20	coord: 133..230
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 3..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16918-RA	Carg16918-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane