Carg16906 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16906
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr19: 790650 .. 792326 (+)
RNA-Seq ExpressionCarg16906
SyntenyCarg16906
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAATGTGTACAAACTCCATTGTTGTATAATCAAAACTTGCAAGCAGCATGATCCTCGCTCTCTACGTAGCCTCCTTCTTTCCTGTGCTGCTGCAGCTCCCGAAAGCTTATCTCATGCTCGCTATGTATTCTCTCGGATTCCTTCTCCAGATACCTTCGCTTACAACACCATCATACGAGCACATTCTCATTTTTTTCCTTCTCATTCTTTGTCCTGTTTCTCTTCTATGCGGTGCAATGGCGTCCCCTGTGATAATTTCACATTCCCATTTGTTCTTAAGGCATGTGCTCGATTGCAAATGGATCTTCACTTGCATTCCCTTATTGTTAAATATGGTTTGGACTCTGATATTTTTGTGCAGAATTCATTGATGAGTGTTTATGGTTGCTGTGGGTCTGTTGAGATTGCAGTCAAGGTGTTTGATGAAATGTCTGAGAGAGATTCTGTTTCTTGGTCTACTATTATTGTTTCTTTTGTTAATAATGGCTATGCATCTGAGGCTTTGGCCTTGTTTAAGGCAATGCAGCTGGAAGATAAAGTAGTTCCTGATGAGGTAACCATGCTCAGTGTGATATCTGCGATCTCGCACTTGGGAGCATTAGAATTGGGTCGTTGGGTTCGGATGTTTATCGACAAGCTTGGCTTGGAAATTTCTGTTGCTTTGGGCACTGCTCTTATTGACATGTTCTCCAGATGTGGCTCCATTGATGAATCAGTTGTAGTATTCGAAGAGATGGCGGTGAGGAACGTGTTGACATGGACCGCGCTGATAAACGGGTTTGCAGTCCACGGGTGCAGTAGGGAGGCTTTGGCAGTGTTCCACAGCATGAGGAATTCAGGGGTGCAGCCAGATTATATAACCTTTTCTAGTGTCTTAGTAGCTTGTAGCCATGGCGGTCTTGTAAAAGAAGGTCGGGATATTTTCGAAAGCATTTCGAAGGATTATCAGATGGTTCCTCATCTAGAGCATTATGGCTGCATGGTTGATCTTCTTGGCCGTGCAGGGCTGCTGAATGAAGCTTATGAATTTGTGGAAAGAATGCCAATGAAGCCGAATTCAATCATCTGGAGGACCCTTCTCGGAGCATGTGCGAATCACAACGATCTCGATATAGCTGAGAAGGTGAAGGCAAAGATCTCCGAGCTAAACTCGTCGCACGATGGCGATTTTGTGCTTCTATCCAATGTGTATGGAGCAGCTGGTAGATGGGTAGAGAAGACATCGGTGAGGAGTTGGATGAGAAGCAAAAGAATAGGCAAAGAACCTGGCTGTAGTTTGATTAATATAGACCAAGCGACTCACGAGTTTGTTTCTGGGGACGATTCTCATCCACAGTCCGAGGAGATAACGAAGTTCTTGAGCTCGATTATTGGGGATCTAAGAAACAGCGGTTACACGCCTCGCACGGAAAATGTACTACACGATATTGACGAGGAAGAAAGAGAGCATTCCTTGAGTTATCACAGTGAGAAATTAGCTGTGGCCTTTGCTCTTCTTAGTTTGAAAGATAAAAGGACGATAAGGATCATGAAGAATCTTAGAATTTGTCATGACTGTCATTCGTTTATGAAACATATTTCAGACAAGTATGAGAGGAAGATAATTATTCGGGATCGCAATCGGTTTCATCATTTTGATAAAGGGTCATGTTCATGTCGTGATTATTGGTGA

mRNA sequence

ATGAATAATGTGTACAAACTCCATTGTTGTATAATCAAAACTTGCAAGCAGCATGATCCTCGCTCTCTACGTAGCCTCCTTCTTTCCTGTGCTGCTGCAGCTCCCGAAAGCTTATCTCATGCTCGCTATGTATTCTCTCGGATTCCTTCTCCAGATACCTTCGCTTACAACACCATCATACGAGCACATTCTCATTTTTTTCCTTCTCATTCTTTGTCCTGTTTCTCTTCTATGCGGTGCAATGGCGTCCCCTGTGATAATTTCACATTCCCATTTGTTCTTAAGGCATGTGCTCGATTGCAAATGGATCTTCACTTGCATTCCCTTATTGTTAAATATGGTTTGGACTCTGATATTTTTGTGCAGAATTCATTGATGAGTGTTTATGGTTGCTGTGGGTCTGTTGAGATTGCAGTCAAGGTGTTTGATGAAATGTCTGAGAGAGATTCTGTTTCTTGGTCTACTATTATTGTTTCTTTTGTTAATAATGGCTATGCATCTGAGGCTTTGGCCTTGTTTAAGGCAATGCAGCTGGAAGATAAAGTAGTTCCTGATGAGGTAACCATGCTCAGTGTGATATCTGCGATCTCGCACTTGGGAGCATTAGAATTGGGTCGTTGGGTTCGGATGTTTATCGACAAGCTTGGCTTGGAAATTTCTGTTGCTTTGGGCACTGCTCTTATTGACATGTTCTCCAGATGTGGCTCCATTGATGAATCAGTTGTAGTATTCGAAGAGATGGCGGTGAGGAACGTGTTGACATGGACCGCGCTGATAAACGGGTTTGCAGTCCACGGGTGCAGTAGGGAGGCTTTGGCAGTGTTCCACAGCATGAGGAATTCAGGGGTGCAGCCAGATTATATAACCTTTTCTAGTGTCTTAGTAGCTTGTAGCCATGGCGGTCTTGTAAAAGAAGGTCGGGATATTTTCGAAAGCATTTCGAAGGATTATCAGATGGTTCCTCATCTAGAGCATTATGGCTGCATGGTTGATCTTCTTGGCCGTGCAGGGCTGCTGAATGAAGCTTATGAATTTGTGGAAAGAATGCCAATGAAGCCGAATTCAATCATCTGGAGGACCCTTCTCGGAGCATGTGCGAATCACAACGATCTCGATATAGCTGAGAAGGTGAAGGCAAAGATCTCCGAGCTAAACTCGTCGCACGATGGCGATTTTGTGCTTCTATCCAATGTGTATGGAGCAGCTGGTAGATGGGTAGAGAAGACATCGGTGAGGAGTTGGATGAGAAGCAAAAGAATAGGCAAAGAACCTGGCTGTAGTTTGATTAATATAGACCAAGCGACTCACGAGTTTGTTTCTGGGGACGATTCTCATCCACAGTCCGAGGAGATAACGAAGTTCTTGAGCTCGATTATTGGGGATCTAAGAAACAGCGGTTACACGCCTCGCACGGAAAATGTACTACACGATATTGACGAGGAAGAAAGAGAGCATTCCTTGAGTTATCACAGTGAGAAATTAGCTGTGGCCTTTGCTCTTCTTAGTTTGAAAGATAAAAGGACGATAAGGATCATGAAGAATCTTAGAATTTGTCATGACTGTCATTCGTTTATGAAACATATTTCAGACAAGTATGAGAGGAAGATAATTATTCGGGATCGCAATCGGTTTCATCATTTTGATAAAGGGTCATGTTCATGTCGTGATTATTGGTGA

Coding sequence (CDS)

ATGAATAATGTGTACAAACTCCATTGTTGTATAATCAAAACTTGCAAGCAGCATGATCCTCGCTCTCTACGTAGCCTCCTTCTTTCCTGTGCTGCTGCAGCTCCCGAAAGCTTATCTCATGCTCGCTATGTATTCTCTCGGATTCCTTCTCCAGATACCTTCGCTTACAACACCATCATACGAGCACATTCTCATTTTTTTCCTTCTCATTCTTTGTCCTGTTTCTCTTCTATGCGGTGCAATGGCGTCCCCTGTGATAATTTCACATTCCCATTTGTTCTTAAGGCATGTGCTCGATTGCAAATGGATCTTCACTTGCATTCCCTTATTGTTAAATATGGTTTGGACTCTGATATTTTTGTGCAGAATTCATTGATGAGTGTTTATGGTTGCTGTGGGTCTGTTGAGATTGCAGTCAAGGTGTTTGATGAAATGTCTGAGAGAGATTCTGTTTCTTGGTCTACTATTATTGTTTCTTTTGTTAATAATGGCTATGCATCTGAGGCTTTGGCCTTGTTTAAGGCAATGCAGCTGGAAGATAAAGTAGTTCCTGATGAGGTAACCATGCTCAGTGTGATATCTGCGATCTCGCACTTGGGAGCATTAGAATTGGGTCGTTGGGTTCGGATGTTTATCGACAAGCTTGGCTTGGAAATTTCTGTTGCTTTGGGCACTGCTCTTATTGACATGTTCTCCAGATGTGGCTCCATTGATGAATCAGTTGTAGTATTCGAAGAGATGGCGGTGAGGAACGTGTTGACATGGACCGCGCTGATAAACGGGTTTGCAGTCCACGGGTGCAGTAGGGAGGCTTTGGCAGTGTTCCACAGCATGAGGAATTCAGGGGTGCAGCCAGATTATATAACCTTTTCTAGTGTCTTAGTAGCTTGTAGCCATGGCGGTCTTGTAAAAGAAGGTCGGGATATTTTCGAAAGCATTTCGAAGGATTATCAGATGGTTCCTCATCTAGAGCATTATGGCTGCATGGTTGATCTTCTTGGCCGTGCAGGGCTGCTGAATGAAGCTTATGAATTTGTGGAAAGAATGCCAATGAAGCCGAATTCAATCATCTGGAGGACCCTTCTCGGAGCATGTGCGAATCACAACGATCTCGATATAGCTGAGAAGGTGAAGGCAAAGATCTCCGAGCTAAACTCGTCGCACGATGGCGATTTTGTGCTTCTATCCAATGTGTATGGAGCAGCTGGTAGATGGGTAGAGAAGACATCGGTGAGGAGTTGGATGAGAAGCAAAAGAATAGGCAAAGAACCTGGCTGTAGTTTGATTAATATAGACCAAGCGACTCACGAGTTTGTTTCTGGGGACGATTCTCATCCACAGTCCGAGGAGATAACGAAGTTCTTGAGCTCGATTATTGGGGATCTAAGAAACAGCGGTTACACGCCTCGCACGGAAAATGTACTACACGATATTGACGAGGAAGAAAGAGAGCATTCCTTGAGTTATCACAGTGAGAAATTAGCTGTGGCCTTTGCTCTTCTTAGTTTGAAAGATAAAAGGACGATAAGGATCATGAAGAATCTTAGAATTTGTCATGACTGTCATTCGTTTATGAAACATATTTCAGACAAGTATGAGAGGAAGATAATTATTCGGGATCGCAATCGGTTTCATCATTTTGATAAAGGGTCATGTTCATGTCGTGATTATTGGTGA

Protein sequence

MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTIIRAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIFVQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHGGLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDEEEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHHFDKGSCSCRDYW
Homology
BLAST of Carg16906 vs. NCBI nr
Match: KAG7011296.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1135.6 bits (2936), Expect = 0.0e+00
Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII
Sbjct: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF
Sbjct: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED
Sbjct: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG
Sbjct: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT
Sbjct: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI
Sbjct: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE
Sbjct: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHFDKGSCSCRDYW
Sbjct: 541 RNRFHHFDKGSCSCRDYW 558

BLAST of Carg16906 vs. NCBI nr
Match: XP_022963775.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata])

HSP 1 Score: 1121.7 bits (2900), Expect = 0.0e+00
Identity = 554/558 (99.28%), Postives = 556/558 (99.64%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII
Sbjct: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF
Sbjct: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED
Sbjct: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           VVVFEEMAVRNVLTWTALINGFAVHG SREALAVFHSMRNSGVQPDYITFSSVLVACSHG
Sbjct: 241 VVVFEEMAVRNVLTWTALINGFAVHGRSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFE+ISKDYQMVPHLE+YGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT
Sbjct: 301 GLVKEGRDIFETISKDYQMVPHLENYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRS MRSKRI
Sbjct: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSRMRSKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE
Sbjct: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHFDKGSCSCRDYW
Sbjct: 541 RNRFHHFDKGSCSCRDYW 558

BLAST of Carg16906 vs. NCBI nr
Match: XP_023553606.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 543/558 (97.31%), Postives = 555/558 (99.46%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHCCIIKTCKQ+DPRSLRSLLLSCAAAAPESLS+ARYVFSRIPSPDTFAYNTII
Sbjct: 1   MNNVYKLHCCIIKTCKQNDPRSLRSLLLSCAAAAPESLSYARYVFSRIPSPDTFAYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           RAHSH+FPSHSLSCFSSMRCNGVPCD+FTFPFVLKAC+RLQMDLHLHSLIVKYGLDSDIF
Sbjct: 61  RAHSHYFPSHSLSCFSSMRCNGVPCDHFTFPFVLKACSRLQMDLHLHSLIVKYGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWST+IVSFVNNGYASEALALFKAMQLED
Sbjct: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTVIVSFVNNGYASEALALFKAMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           VVVFEEMAVRNVLTWTALINGFAVHG SREALAVFHSMRNSGVQPDYITFSSVLVACSHG
Sbjct: 241 VVVFEEMAVRNVLTWTALINGFAVHGRSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLV+EGRDIFESISKDY+MVP+LEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT
Sbjct: 301 GLVREGRDIFESISKDYKMVPYLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI
Sbjct: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLS IIG+LRNSGYTPRTENVLHDIDE
Sbjct: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSLIIGNLRNSGYTPRTENVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFALLSLKDKRTIR+MKNLRICHDCHSFMKHISD+YERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRVMKNLRICHDCHSFMKHISDRYERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHFDKGSCSC DYW
Sbjct: 541 RNRFHHFDKGSCSCHDYW 558

BLAST of Carg16906 vs. NCBI nr
Match: XP_022967226.1 (pentatricopeptide repeat-containing protein At5g48910-like [Cucurbita maxima])

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 540/558 (96.77%), Postives = 549/558 (98.39%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHCCIIKTCKQ+DPRSLRSLLLSCAAAAPESLS+ RYVFSRIPSPDTFAYNTII
Sbjct: 1   MNNVYKLHCCIIKTCKQNDPRSLRSLLLSCAAAAPESLSYVRYVFSRIPSPDTFAYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           R HSH+FPSHSLS FSSMRCNGVPCD+FTFPFVLKACARLQ DLHLHSLIVKYGLDSDIF
Sbjct: 61  RVHSHYFPSHSLSYFSSMRCNGVPCDHFTFPFVLKACARLQTDLHLHSLIVKYGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED
Sbjct: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISA+SHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAVSHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           VVVFEEMAVRNVLTWT LINGFAVHG SREALAVFHSMRNSGVQPDYITFSSVLVACSHG
Sbjct: 241 VVVFEEMAVRNVLTWTTLINGFAVHGRSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFE+ISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT
Sbjct: 301 GLVKEGRDIFETISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHN+LDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRS MRSKRI
Sbjct: 361 LLGACANHNNLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSRMRSKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GKEPGCSLINIDQATHEFVSGDDSHPQSE+ITKFLSSIIGDLRNSGYTPRTENVLHDIDE
Sbjct: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEDITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFALLSLKDK+TIRIMKNLRICHDCHSFMKHISD YERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFALLSLKDKKTIRIMKNLRICHDCHSFMKHISDMYERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHFDKGSCSC DYW
Sbjct: 541 RNRFHHFDKGSCSCHDYW 558

BLAST of Carg16906 vs. NCBI nr
Match: KAG6571551.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1069.3 bits (2764), Expect = 1.1e-308
Identity = 533/549 (97.09%), Postives = 536/549 (97.63%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII
Sbjct: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF
Sbjct: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED
Sbjct: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           VVVFEEMAVRNVLTWTALINGFAVHG SREALAVFHSMRNSGVQPDYITFSSVLVACSHG
Sbjct: 241 VVVFEEMAVRNVLTWTALINGFAVHGRSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT
Sbjct: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI
Sbjct: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE
Sbjct: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISD+ + + I   
Sbjct: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDRTKNQHITEW 540

Query: 541 RNRFHHFDK 550
              F   DK
Sbjct: 541 MVMFSTLDK 549

BLAST of Carg16906 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 481.1 bits (1237), Expect = 1.7e-134
Identity = 236/534 (44.19%), Postives = 360/534 (67.42%), Query Frame = 0

Query: 34  APESLSHARYVFSRIPSP-DTFAYNTIIRAHSHFFPSHSLSCFS---SMRCNG-VPCDNF 93
           +P  +S+A  VFS+I  P + F +NT+IR ++     +S+S FS    MR +G V  D  
Sbjct: 65  SPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEI--GNSISAFSLYREMRVSGLVEPDTH 124

Query: 94  TFPFVLKA---CARLQMDLHLHSLIVKYGLDSDIFVQNSLMSVYGCCGSVEIAVKVFDEM 153
           T+PF++KA    A +++   +HS++++ G  S I+VQNSL+ +Y  CG V  A KVFD+M
Sbjct: 125 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 184

Query: 154 SERDSVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDEVTMLSVISAISHLGALELG 213
            E+D V+W+++I  F  NG   EALAL+  M  +  + PD  T++S++SA + +GAL LG
Sbjct: 185 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLG 244

Query: 214 RWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEEMAVRNVLTWTALINGFAVH 273
           + V +++ K+GL  ++     L+D+++RCG ++E+  +F+EM  +N ++WT+LI G AV+
Sbjct: 245 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 304

Query: 274 GCSREALAVFHSMRNS-GVQPDYITFSSVLVACSHGGLVKEGRDIFESISKDYQMVPHLE 333
           G  +EA+ +F  M ++ G+ P  ITF  +L ACSH G+VKEG + F  + ++Y++ P +E
Sbjct: 305 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 364

Query: 334 HYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACANHNDLDIAEKVKAKISEL 393
           H+GCMVDLL RAG + +AYE+++ MPM+PN +IWRTLLGAC  H D D+AE  + +I +L
Sbjct: 365 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 424

Query: 394 NSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGCSLINIDQATHEFVSGDDS 453
             +H GD+VLLSN+Y +  RW +   +R  M    + K PG SL+ +    HEF+ GD S
Sbjct: 425 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 484

Query: 454 HPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDEEEREHSLSYHSEKLAVAFALLSLK 513
           HPQS+ I   L  + G LR+ GY P+  NV  D++EEE+E+++ YHSEK+A+AF L+S  
Sbjct: 485 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP 544

Query: 514 DKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHHFDKGSCSCRDYW 559
           ++  I ++KNLR+C DCH  +K +S  Y R+I++RDR+RFHHF  GSCSC+DYW
Sbjct: 545 ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Carg16906 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 3.5e-132
Identity = 248/612 (40.52%), Postives = 367/612 (59.97%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAA--APESLSHARYVFSRIPSPDTFAYNT 60
           + ++ ++H   IK+ +  D  +   +L  CA +      L +A  +F+++P  + F++NT
Sbjct: 36  IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95

Query: 61  IIRAHSHFFPSHSLSC----FSSMRCNGVPCDNFTFPFVLKACA---RLQMDLHLHSLIV 120
           IIR  S      +L      +  M    V  + FTFP VLKACA   ++Q    +H L +
Sbjct: 96  IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155

Query: 121 KYGLDSDIFVQNSLMSVYGCC--------------------------------------- 180
           KYG   D FV ++L+ +Y  C                                       
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215

Query: 181 ------GSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDE 240
                 G  + A  +FD+M +R  VSW+T+I  +  NG+  +A+ +F+ M+  D + P+ 
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD-IRPNY 275

Query: 241 VTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEE 300
           VT++SV+ AIS LG+LELG W+ ++ +  G+ I   LG+ALIDM+S+CG I++++ VFE 
Sbjct: 276 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 335

Query: 301 MAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHGGLVKEG 360
           +   NV+TW+A+INGFA+HG + +A+  F  MR +GV+P  + + ++L ACSHGGLV+EG
Sbjct: 336 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 395

Query: 361 RDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACA 420
           R  F  +     + P +EHYGCMVDLLGR+GLL+EA EF+  MP+KP+ +IW+ LLGAC 
Sbjct: 396 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 455

Query: 421 NHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGC 480
              ++++ ++V   + ++     G +V LSN+Y + G W E + +R  M+ K I K+PGC
Sbjct: 456 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 515

Query: 481 SLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDEEEREHS 540
           SLI+ID   HEFV  DDSHP+++EI   L  I   LR +GY P T  VL +++EE++E+ 
Sbjct: 516 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENV 575

Query: 541 LSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHH 559
           L YHSEK+A AF L+S    + IRI+KNLRIC DCHS +K IS  Y+RKI +RDR RFHH
Sbjct: 576 LHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHH 635

BLAST of Carg16906 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.1e-125
Identity = 228/590 (38.64%), Postives = 356/590 (60.34%), Query Frame = 0

Query: 6   KLHCCIIKTCKQHDPRSLRSLLLSC-AAAAPESLSHARYVFSRIPSPDTFAYNTIIRAHS 65
           ++H  ++KT    D  ++   L  C ++ + + L +A+ VF     PDTF +N +IR  S
Sbjct: 32  QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91

Query: 66  -HFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARL---QMDLHLHSLIVKYGLDSDIF 125
               P  SL  +  M C+  P + +TFP +LKAC+ L   +    +H+ I K G ++D++
Sbjct: 92  CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151

Query: 126 VQNSLMSVYGC-------------------------------CGSVEIAVKVFDEMSERD 185
             NSL++ Y                                  G ++IA+ +F +M+E++
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211

Query: 186 SVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDEVTMLSVISAISHLGALELGRWVR 245
           ++SW+T+I  +V      EAL LF  MQ  D V PD V++ + +SA + LGALE G+W+ 
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSD-VEPDNVSLANALSACAQLGALEQGKWIH 271

Query: 246 MFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEEMAVRNVLTWTALINGFAVHGCSR 305
            +++K  + +   LG  LIDM+++CG ++E++ VF+ +  ++V  WTALI+G+A HG  R
Sbjct: 272 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 331

Query: 306 EALAVFHSMRNSGVQPDYITFSSVLVACSHGGLVKEGRDIFESISKDYQMVPHLEHYGCM 365
           EA++ F  M+  G++P+ ITF++VL ACS+ GLV+EG+ IF S+ +DY + P +EHYGC+
Sbjct: 332 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 391

Query: 366 VDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACANHNDLDIAEKVKAKISELNSSHD 425
           VDLLGRAGLL+EA  F++ MP+KPN++IW  LL AC  H ++++ E++   +  ++  H 
Sbjct: 392 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 451

Query: 426 GDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGCSLINIDQATHEFVSGDDSHPQSE 485
           G +V  +N++    +W +    R  M+ + + K PGCS I+++  THEF++GD SHP+ E
Sbjct: 452 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 511

Query: 486 EITKFLSSIIGDLRNSGYTPRTENVLHD-IDEEEREHSLSYHSEKLAVAFALLSLKDKRT 545
           +I      +   L  +GY P  E +L D +D++ERE  +  HSEKLA+ + L+  K    
Sbjct: 512 KIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTI 571

Query: 546 IRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHHFDKGSCSCRDYW 559
           IRIMKNLR+C DCH   K IS  Y+R I++RDR RFHHF  G CSC DYW
Sbjct: 572 IRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of Carg16906 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 451.1 bits (1159), Expect = 1.9e-125
Identity = 226/546 (41.39%), Postives = 351/546 (64.29%), Query Frame = 0

Query: 19  DPRSLRSLLLSCAAAAPE-SLSHARYVFSRIPSPDTFAYNTIIRAHSHFF-PSHSLSCFS 78
           D   +  L+  C  +  E S+S+AR++F  +  PD   +N++ R +S F  P    S F 
Sbjct: 59  DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFV 118

Query: 79  SMRCNGVPCDNFTFPFVLKACA---RLQMDLHLHSLIVKYGLDSDIFVQNSLMSVYGCCG 138
            +  +G+  DN+TFP +LKACA    L+    LH L +K GLD +++V  +L+++Y  C 
Sbjct: 119 EILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE 178

Query: 139 SVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDEVTMLSVI 198
            V+ A  VFD + E   V ++ +I  +      +EAL+LF+ MQ    + P+E+T+LSV+
Sbjct: 179 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ-GKYLKPNEITLLSVL 238

Query: 199 SAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEEMAVRNVL 258
           S+ + LG+L+LG+W+  +  K      V + TALIDMF++CGS+D++V +FE+M  ++  
Sbjct: 239 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ 298

Query: 259 TWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHGGLVKEGRDIFESI 318
            W+A+I  +A HG + +++ +F  MR+  VQPD ITF  +L ACSH G V+EGR  F  +
Sbjct: 299 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 358

Query: 319 SKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACANHNDLDI 378
              + +VP ++HYG MVDLL RAG L +AYEF++++P+ P  ++WR LL AC++HN+LD+
Sbjct: 359 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDL 418

Query: 379 AEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGCSLINIDQ 438
           AEKV  +I EL+ SH GD+V+LSN+Y    +W    S+R  M+ ++  K PGCS I ++ 
Sbjct: 419 AEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 478

Query: 439 ATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLH-DIDEEEREHSLSYHSE 498
             HEF SGD     + ++ + L  ++ +L+ SGY P T  V+H +++++E+E +L YHSE
Sbjct: 479 VVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSE 538

Query: 499 KLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHHFDKGSC 558
           KLA+ F LL+     TIR++KNLR+C DCH+  K IS  + RK+++RD  RFHHF+ G C
Sbjct: 539 KLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKC 598

BLAST of Carg16906 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.3e-123
Identity = 232/557 (41.65%), Postives = 349/557 (62.66%), Query Frame = 0

Query: 38  LSHARYVFSRIPSPDTFAYNTIIRAHS-HFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKA 97
           L +A  +FS+I +P+ F +N +IR  S    PS +   ++ M  + +  DN TFPF++KA
Sbjct: 67  LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126

Query: 98  CARLQMDL---HLHSLIVKYGLDSDIFVQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSW 157
            + ++  L     HS IV++G  +D++V+NSL+ +Y  CG +  A ++F +M  RD VSW
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186

Query: 158 STIIV--------------------------SFVNNGYA-----SEALALFKAMQLEDKV 217
           ++++                           S + NGYA      +A+ LF+ M+ E  V
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG-V 246

Query: 218 VPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVV 277
           V +E  M+SVIS+ +HLGALE G     ++ K  + +++ LGTAL+DMF RCG I++++ 
Sbjct: 247 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 306

Query: 278 VFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHGGL 337
           VFE +   + L+W+++I G AVHG + +A+  F  M + G  P  +TF++VL ACSHGGL
Sbjct: 307 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 366

Query: 338 VKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLL 397
           V++G +I+E++ KD+ + P LEHYGC+VD+LGRAG L EA  F+ +M +KPN+ I   LL
Sbjct: 367 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 426

Query: 398 GACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGK 457
           GAC  + + ++AE+V   + ++   H G +VLLSN+Y  AG+W +  S+R  M+ K + K
Sbjct: 427 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 486

Query: 458 EPGCSLINIDQATHEFVSGDD-SHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDEE 517
            PG SLI ID   ++F  GDD  HP+  +I +    I+G +R  GY   T +   D+DEE
Sbjct: 487 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEE 546

Query: 518 EREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDR 559
           E+E S+  HSEKLA+A+ ++  K   TIRI+KNLR+C DCH+  K IS+ Y R++I+RDR
Sbjct: 547 EKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDR 606

BLAST of Carg16906 vs. ExPASy TrEMBL
Match: A0A6J1HIY8 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata OX=3662 GN=LOC111463965 PE=3 SV=1)

HSP 1 Score: 1121.7 bits (2900), Expect = 0.0e+00
Identity = 554/558 (99.28%), Postives = 556/558 (99.64%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII
Sbjct: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF
Sbjct: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED
Sbjct: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           VVVFEEMAVRNVLTWTALINGFAVHG SREALAVFHSMRNSGVQPDYITFSSVLVACSHG
Sbjct: 241 VVVFEEMAVRNVLTWTALINGFAVHGRSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFE+ISKDYQMVPHLE+YGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT
Sbjct: 301 GLVKEGRDIFETISKDYQMVPHLENYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRS MRSKRI
Sbjct: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSRMRSKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE
Sbjct: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHFDKGSCSCRDYW
Sbjct: 541 RNRFHHFDKGSCSCRDYW 558

BLAST of Carg16906 vs. ExPASy TrEMBL
Match: A0A6J1HRF3 (pentatricopeptide repeat-containing protein At5g48910-like OS=Cucurbita maxima OX=3661 GN=LOC111466823 PE=3 SV=1)

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 540/558 (96.77%), Postives = 549/558 (98.39%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHCCIIKTCKQ+DPRSLRSLLLSCAAAAPESLS+ RYVFSRIPSPDTFAYNTII
Sbjct: 1   MNNVYKLHCCIIKTCKQNDPRSLRSLLLSCAAAAPESLSYVRYVFSRIPSPDTFAYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           R HSH+FPSHSLS FSSMRCNGVPCD+FTFPFVLKACARLQ DLHLHSLIVKYGLDSDIF
Sbjct: 61  RVHSHYFPSHSLSYFSSMRCNGVPCDHFTFPFVLKACARLQTDLHLHSLIVKYGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED
Sbjct: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISA+SHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAVSHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           VVVFEEMAVRNVLTWT LINGFAVHG SREALAVFHSMRNSGVQPDYITFSSVLVACSHG
Sbjct: 241 VVVFEEMAVRNVLTWTTLINGFAVHGRSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFE+ISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT
Sbjct: 301 GLVKEGRDIFETISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHN+LDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRS MRSKRI
Sbjct: 361 LLGACANHNNLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSRMRSKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GKEPGCSLINIDQATHEFVSGDDSHPQSE+ITKFLSSIIGDLRNSGYTPRTENVLHDIDE
Sbjct: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEDITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFALLSLKDK+TIRIMKNLRICHDCHSFMKHISD YERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFALLSLKDKKTIRIMKNLRICHDCHSFMKHISDMYERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHFDKGSCSC DYW
Sbjct: 541 RNRFHHFDKGSCSCHDYW 558

BLAST of Carg16906 vs. ExPASy TrEMBL
Match: A0A6J1DN44 (pentatricopeptide repeat-containing protein At4g21065-like OS=Momordica charantia OX=3673 GN=LOC111022757 PE=3 SV=1)

HSP 1 Score: 981.9 bits (2537), Expect = 1.1e-282
Identity = 483/558 (86.56%), Postives = 515/558 (92.29%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MNNVYKLHC IIKT KQ+D   LRSLLLSCAAAAP+S+S+AR +FSRIPSPDTF+YNTII
Sbjct: 1   MNNVYKLHCFIIKTGKQNDLLYLRSLLLSCAAAAPKSVSYARSIFSRIPSPDTFSYNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           R H+HFFPSHSLS FS+MRC+GVP DNFTFPFVLKACARLQ+DLHLHSLIVK+G DSDIF
Sbjct: 61  RIHAHFFPSHSLSYFSTMRCHGVPLDNFTFPFVLKACARLQIDLHLHSLIVKHGFDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQN+LMSVYGCCGSVE+A+KVFDE+SERDSVSWS II SFVNNGYASEALALFK MQLE+
Sbjct: 121 VQNALMSVYGCCGSVELALKVFDEISERDSVSWSAIIASFVNNGYASEALALFKQMQLEN 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISA+SHLGALELGRWVRM+I ++GL ISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAVSHLGALELGRWVRMYIGRIGLGISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           V VFE MAVRNVLTWT LING AVHG SREALAVFHSMRNS VQPDY+TFSSVLVACSHG
Sbjct: 241 VRVFEGMAVRNVLTWTVLINGLAVHGRSREALAVFHSMRNSSVQPDYVTFSSVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGR +FESI KDYQM P LEHYGCMVDLLGRAGLL+EAYEFVER+P+KPNSIIWRT
Sbjct: 301 GLVKEGRHVFESIRKDYQMDPLLEHYGCMVDLLGRAGLLSEAYEFVERIPVKPNSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGACANHN+LD+A KVK KI EL+SSHDGDFVLLSN YGAAGRW EK SVRSWMR KRI
Sbjct: 361 LLGACANHNNLDLAAKVKGKICELDSSHDGDFVLLSNAYGAAGRWAEKASVRSWMRGKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
            KEPG SLIN+DQ THEFVSGD SHPQSEEI KFLSSIIG+LRN GYTP TE VLHDIDE
Sbjct: 421 MKEPGYSLINVDQVTHEFVSGDSSHPQSEEIMKFLSSIIGELRNGGYTPHTEYVLHDIDE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EE+EH LSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMK+ISDKYERKIIIRD
Sbjct: 481 EEKEHFLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKYISDKYERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHFDKGSCSC  YW
Sbjct: 541 RNRFHHFDKGSCSCHGYW 558

BLAST of Carg16906 vs. ExPASy TrEMBL
Match: A0A5A7T8N1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00490 PE=3 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 9.6e-274
Identity = 468/558 (83.87%), Postives = 511/558 (91.58%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MN+VYKLHC IIK+ KQ DP SLR+LLLSC A APESLS+ RYVFSRIPSPDTFA NTII
Sbjct: 1   MNSVYKLHCYIIKSGKQTDPLSLRTLLLSCVATAPESLSYTRYVFSRIPSPDTFACNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           R+HSH FPSHSLS F +MR NG+P DNFTFPFVLKAC+RLQ++LHLHSLIVK+GLDSDIF
Sbjct: 61  RSHSHLFPSHSLSYFFAMRSNGIPFDNFTFPFVLKACSRLQINLHLHSLIVKHGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQN+L+ VYG CGS+E+AVKVFDEMSERDSVSWSTII SF+NNG+ASEALALF+ MQLED
Sbjct: 121 VQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTIIASFLNNGHASEALALFQKMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISAISHLG LELGRWVR FI +LGL ISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAISHLGDLELGRWVRTFIGRLGLGISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           +VVFEEMAVRNVLTWT LING  VHG S EALA+FHSMRNSGVQPDYITF+ VLVACSHG
Sbjct: 241 IVVFEEMAVRNVLTWTTLINGLGVHGRSTEALAMFHSMRNSGVQPDYITFTGVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFESI K Y+M P LEHYGCMVDLLGRAGLLNEAYEFVERMPMKP+SIIWRT
Sbjct: 301 GLVKEGRDIFESIRKVYRMDPLLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPDSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGAC NHN+L++ EKVKAKIS+++SSHDGDFVLLSNVYGAAGRW EKTS+RS MR KRI
Sbjct: 361 LLGACVNHNNLNLVEKVKAKISKISSSHDGDFVLLSNVYGAAGRWEEKTSMRSKMREKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GK+PGCSLIN+DQ  HEFVSGD+SHPQSE ITKFLSSIIG LRN GY  +TENVLHDI+E
Sbjct: 421 GKKPGCSLINVDQTVHEFVSGDNSHPQSENITKFLSSIIGKLRNRGYMMQTENVLHDIEE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFA+L++KDKRTIRIMKNLRIC DCHSFMKH+S ++ERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFAILNMKDKRTIRIMKNLRICDDCHSFMKHLSVRFERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHF+KG CSC DYW
Sbjct: 541 RNRFHHFEKGLCSCHDYW 558

BLAST of Carg16906 vs. ExPASy TrEMBL
Match: A0A1S3BGQ3 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=3656 GN=LOC103489835 PE=3 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 9.6e-274
Identity = 468/558 (83.87%), Postives = 511/558 (91.58%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAAAPESLSHARYVFSRIPSPDTFAYNTII 60
           MN+VYKLHC IIK+ KQ DP SLR+LLLSC A APESLS+ RYVFSRIPSPDTFA NTII
Sbjct: 1   MNSVYKLHCYIIKSGKQTDPLSLRTLLLSCVATAPESLSYTRYVFSRIPSPDTFACNTII 60

Query: 61  RAHSHFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARLQMDLHLHSLIVKYGLDSDIF 120
           R+HSH FPSHSLS F +MR NG+P DNFTFPFVLKAC+RLQ++LHLHSLIVK+GLDSDIF
Sbjct: 61  RSHSHLFPSHSLSYFFAMRSNGIPFDNFTFPFVLKACSRLQINLHLHSLIVKHGLDSDIF 120

Query: 121 VQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLED 180
           VQN+L+ VYG CGS+E+AVKVFDEMSERDSVSWSTII SF+NNG+ASEALALF+ MQLED
Sbjct: 121 VQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTIIASFLNNGHASEALALFQKMQLED 180

Query: 181 KVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDES 240
           KVVPDEVTMLSVISAISHLG LELGRWVR FI +LGL ISVALGTALIDMFSRCGSIDES
Sbjct: 181 KVVPDEVTMLSVISAISHLGDLELGRWVRTFIGRLGLGISVALGTALIDMFSRCGSIDES 240

Query: 241 VVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHG 300
           +VVFEEMAVRNVLTWT LING  VHG S EALA+FHSMRNSGVQPDYITF+ VLVACSHG
Sbjct: 241 IVVFEEMAVRNVLTWTTLINGLGVHGRSTEALAMFHSMRNSGVQPDYITFTGVLVACSHG 300

Query: 301 GLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRT 360
           GLVKEGRDIFESI K Y+M P LEHYGCMVDLLGRAGLLNEAYEFVERMPMKP+SIIWRT
Sbjct: 301 GLVKEGRDIFESIRKVYRMDPLLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPDSIIWRT 360

Query: 361 LLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRI 420
           LLGAC NHN+L++ EKVKAKIS+++SSHDGDFVLLSNVYGAAGRW EKTS+RS MR KRI
Sbjct: 361 LLGACVNHNNLNLVEKVKAKISKISSSHDGDFVLLSNVYGAAGRWEEKTSMRSKMREKRI 420

Query: 421 GKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDE 480
           GK+PGCSLIN+DQ  HEFVSGD+SHPQSE ITKFLSSIIG LRN GY  +TENVLHDI+E
Sbjct: 421 GKKPGCSLINVDQTVHEFVSGDNSHPQSENITKFLSSIIGKLRNRGYMMQTENVLHDIEE 480

Query: 481 EEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRD 540
           EEREHSLSYHSEKLAVAFA+L++KDKRTIRIMKNLRIC DCHSFMKH+S ++ERKIIIRD
Sbjct: 481 EEREHSLSYHSEKLAVAFAILNMKDKRTIRIMKNLRICDDCHSFMKHLSVRFERKIIIRD 540

Query: 541 RNRFHHFDKGSCSCRDYW 559
           RNRFHHF+KG CSC DYW
Sbjct: 541 RNRFHHFEKGLCSCHDYW 558

BLAST of Carg16906 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 481.1 bits (1237), Expect = 1.2e-135
Identity = 236/534 (44.19%), Postives = 360/534 (67.42%), Query Frame = 0

Query: 34  APESLSHARYVFSRIPSP-DTFAYNTIIRAHSHFFPSHSLSCFS---SMRCNG-VPCDNF 93
           +P  +S+A  VFS+I  P + F +NT+IR ++     +S+S FS    MR +G V  D  
Sbjct: 65  SPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEI--GNSISAFSLYREMRVSGLVEPDTH 124

Query: 94  TFPFVLKA---CARLQMDLHLHSLIVKYGLDSDIFVQNSLMSVYGCCGSVEIAVKVFDEM 153
           T+PF++KA    A +++   +HS++++ G  S I+VQNSL+ +Y  CG V  A KVFD+M
Sbjct: 125 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 184

Query: 154 SERDSVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDEVTMLSVISAISHLGALELG 213
            E+D V+W+++I  F  NG   EALAL+  M  +  + PD  T++S++SA + +GAL LG
Sbjct: 185 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLG 244

Query: 214 RWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEEMAVRNVLTWTALINGFAVH 273
           + V +++ K+GL  ++     L+D+++RCG ++E+  +F+EM  +N ++WT+LI G AV+
Sbjct: 245 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 304

Query: 274 GCSREALAVFHSMRNS-GVQPDYITFSSVLVACSHGGLVKEGRDIFESISKDYQMVPHLE 333
           G  +EA+ +F  M ++ G+ P  ITF  +L ACSH G+VKEG + F  + ++Y++ P +E
Sbjct: 305 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 364

Query: 334 HYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACANHNDLDIAEKVKAKISEL 393
           H+GCMVDLL RAG + +AYE+++ MPM+PN +IWRTLLGAC  H D D+AE  + +I +L
Sbjct: 365 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 424

Query: 394 NSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGCSLINIDQATHEFVSGDDS 453
             +H GD+VLLSN+Y +  RW +   +R  M    + K PG SL+ +    HEF+ GD S
Sbjct: 425 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 484

Query: 454 HPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDEEEREHSLSYHSEKLAVAFALLSLK 513
           HPQS+ I   L  + G LR+ GY P+  NV  D++EEE+E+++ YHSEK+A+AF L+S  
Sbjct: 485 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP 544

Query: 514 DKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHHFDKGSCSCRDYW 559
           ++  I ++KNLR+C DCH  +K +S  Y R+I++RDR+RFHHF  GSCSC+DYW
Sbjct: 545 ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Carg16906 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 473.4 bits (1217), Expect = 2.5e-133
Identity = 248/612 (40.52%), Postives = 367/612 (59.97%), Query Frame = 0

Query: 1   MNNVYKLHCCIIKTCKQHDPRSLRSLLLSCAAA--APESLSHARYVFSRIPSPDTFAYNT 60
           + ++ ++H   IK+ +  D  +   +L  CA +      L +A  +F+++P  + F++NT
Sbjct: 36  IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95

Query: 61  IIRAHSHFFPSHSLSC----FSSMRCNGVPCDNFTFPFVLKACA---RLQMDLHLHSLIV 120
           IIR  S      +L      +  M    V  + FTFP VLKACA   ++Q    +H L +
Sbjct: 96  IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155

Query: 121 KYGLDSDIFVQNSLMSVYGCC--------------------------------------- 180
           KYG   D FV ++L+ +Y  C                                       
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215

Query: 181 ------GSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDE 240
                 G  + A  +FD+M +R  VSW+T+I  +  NG+  +A+ +F+ M+  D + P+ 
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD-IRPNY 275

Query: 241 VTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEE 300
           VT++SV+ AIS LG+LELG W+ ++ +  G+ I   LG+ALIDM+S+CG I++++ VFE 
Sbjct: 276 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 335

Query: 301 MAVRNVLTWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHGGLVKEG 360
           +   NV+TW+A+INGFA+HG + +A+  F  MR +GV+P  + + ++L ACSHGGLV+EG
Sbjct: 336 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 395

Query: 361 RDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACA 420
           R  F  +     + P +EHYGCMVDLLGR+GLL+EA EF+  MP+KP+ +IW+ LLGAC 
Sbjct: 396 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 455

Query: 421 NHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGC 480
              ++++ ++V   + ++     G +V LSN+Y + G W E + +R  M+ K I K+PGC
Sbjct: 456 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 515

Query: 481 SLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLHDIDEEEREHS 540
           SLI+ID   HEFV  DDSHP+++EI   L  I   LR +GY P T  VL +++EE++E+ 
Sbjct: 516 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENV 575

Query: 541 LSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHH 559
           L YHSEK+A AF L+S    + IRI+KNLRIC DCHS +K IS  Y+RKI +RDR RFHH
Sbjct: 576 LHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHH 635

BLAST of Carg16906 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 451.8 bits (1161), Expect = 7.8e-127
Identity = 228/590 (38.64%), Postives = 356/590 (60.34%), Query Frame = 0

Query: 6   KLHCCIIKTCKQHDPRSLRSLLLSC-AAAAPESLSHARYVFSRIPSPDTFAYNTIIRAHS 65
           ++H  ++KT    D  ++   L  C ++ + + L +A+ VF     PDTF +N +IR  S
Sbjct: 32  QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91

Query: 66  -HFFPSHSLSCFSSMRCNGVPCDNFTFPFVLKACARL---QMDLHLHSLIVKYGLDSDIF 125
               P  SL  +  M C+  P + +TFP +LKAC+ L   +    +H+ I K G ++D++
Sbjct: 92  CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151

Query: 126 VQNSLMSVYGC-------------------------------CGSVEIAVKVFDEMSERD 185
             NSL++ Y                                  G ++IA+ +F +M+E++
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211

Query: 186 SVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDEVTMLSVISAISHLGALELGRWVR 245
           ++SW+T+I  +V      EAL LF  MQ  D V PD V++ + +SA + LGALE G+W+ 
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSD-VEPDNVSLANALSACAQLGALEQGKWIH 271

Query: 246 MFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEEMAVRNVLTWTALINGFAVHGCSR 305
            +++K  + +   LG  LIDM+++CG ++E++ VF+ +  ++V  WTALI+G+A HG  R
Sbjct: 272 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 331

Query: 306 EALAVFHSMRNSGVQPDYITFSSVLVACSHGGLVKEGRDIFESISKDYQMVPHLEHYGCM 365
           EA++ F  M+  G++P+ ITF++VL ACS+ GLV+EG+ IF S+ +DY + P +EHYGC+
Sbjct: 332 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 391

Query: 366 VDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACANHNDLDIAEKVKAKISELNSSHD 425
           VDLLGRAGLL+EA  F++ MP+KPN++IW  LL AC  H ++++ E++   +  ++  H 
Sbjct: 392 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 451

Query: 426 GDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGCSLINIDQATHEFVSGDDSHPQSE 485
           G +V  +N++    +W +    R  M+ + + K PGCS I+++  THEF++GD SHP+ E
Sbjct: 452 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 511

Query: 486 EITKFLSSIIGDLRNSGYTPRTENVLHD-IDEEEREHSLSYHSEKLAVAFALLSLKDKRT 545
           +I      +   L  +GY P  E +L D +D++ERE  +  HSEKLA+ + L+  K    
Sbjct: 512 KIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTI 571

Query: 546 IRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHHFDKGSCSCRDYW 559
           IRIMKNLR+C DCH   K IS  Y+R I++RDR RFHHF  G CSC DYW
Sbjct: 572 IRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of Carg16906 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 451.1 bits (1159), Expect = 1.3e-126
Identity = 226/546 (41.39%), Postives = 351/546 (64.29%), Query Frame = 0

Query: 19  DPRSLRSLLLSCAAAAPE-SLSHARYVFSRIPSPDTFAYNTIIRAHSHFF-PSHSLSCFS 78
           D   +  L+  C  +  E S+S+AR++F  +  PD   +N++ R +S F  P    S F 
Sbjct: 59  DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFV 118

Query: 79  SMRCNGVPCDNFTFPFVLKACA---RLQMDLHLHSLIVKYGLDSDIFVQNSLMSVYGCCG 138
            +  +G+  DN+TFP +LKACA    L+    LH L +K GLD +++V  +L+++Y  C 
Sbjct: 119 EILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE 178

Query: 139 SVEIAVKVFDEMSERDSVSWSTIIVSFVNNGYASEALALFKAMQLEDKVVPDEVTMLSVI 198
            V+ A  VFD + E   V ++ +I  +      +EAL+LF+ MQ    + P+E+T+LSV+
Sbjct: 179 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ-GKYLKPNEITLLSVL 238

Query: 199 SAISHLGALELGRWVRMFIDKLGLEISVALGTALIDMFSRCGSIDESVVVFEEMAVRNVL 258
           S+ + LG+L+LG+W+  +  K      V + TALIDMF++CGS+D++V +FE+M  ++  
Sbjct: 239 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ 298

Query: 259 TWTALINGFAVHGCSREALAVFHSMRNSGVQPDYITFSSVLVACSHGGLVKEGRDIFESI 318
            W+A+I  +A HG + +++ +F  MR+  VQPD ITF  +L ACSH G V+EGR  F  +
Sbjct: 299 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 358

Query: 319 SKDYQMVPHLEHYGCMVDLLGRAGLLNEAYEFVERMPMKPNSIIWRTLLGACANHNDLDI 378
              + +VP ++HYG MVDLL RAG L +AYEF++++P+ P  ++WR LL AC++HN+LD+
Sbjct: 359 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDL 418

Query: 379 AEKVKAKISELNSSHDGDFVLLSNVYGAAGRWVEKTSVRSWMRSKRIGKEPGCSLINIDQ 438
           AEKV  +I EL+ SH GD+V+LSN+Y    +W    S+R  M+ ++  K PGCS I ++ 
Sbjct: 419 AEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 478

Query: 439 ATHEFVSGDDSHPQSEEITKFLSSIIGDLRNSGYTPRTENVLH-DIDEEEREHSLSYHSE 498
             HEF SGD     + ++ + L  ++ +L+ SGY P T  V+H +++++E+E +L YHSE
Sbjct: 479 VVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSE 538

Query: 499 KLAVAFALLSLKDKRTIRIMKNLRICHDCHSFMKHISDKYERKIIIRDRNRFHHFDKGSC 558
           KLA+ F LL+     TIR++KNLR+C DCH+  K IS  + RK+++RD  RFHHF+ G C
Sbjct: 539 KLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKC 598

BLAST of Carg16906 vs. TAIR 10
Match: AT4G21065.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 449.1 bits (1154), Expect = 5.1e-126
Identity = 208/454 (45.81%), Postives = 314/454 (69.16%), Query Frame = 0

Query: 106 LHSLIVKYGLDSDIFVQNSLMSVYGCCGSVEIAVKVFDEMSERDSVSWSTIIVSFVNNGY 165
           +HS++++ G  S I+VQNSL+ +Y  CG V  A KVFD+M E+D V+W+++I  F  NG 
Sbjct: 10  IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69

Query: 166 ASEALALFKAMQLEDKVVPDEVTMLSVISAISHLGALELGRWVRMFIDKLGLEISVALGT 225
             EALAL+  M  +  + PD  T++S++SA + +GAL LG+ V +++ K+GL  ++    
Sbjct: 70  PEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 129

Query: 226 ALIDMFSRCGSIDESVVVFEEMAVRNVLTWTALINGFAVHGCSREALAVFHSMRNS-GVQ 285
            L+D+++RCG ++E+  +F+EM  +N ++WT+LI G AV+G  +EA+ +F  M ++ G+ 
Sbjct: 130 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 189

Query: 286 PDYITFSSVLVACSHGGLVKEGRDIFESISKDYQMVPHLEHYGCMVDLLGRAGLLNEAYE 345
           P  ITF  +L ACSH G+VKEG + F  + ++Y++ P +EH+GCMVDLL RAG + +AYE
Sbjct: 190 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 249

Query: 346 FVERMPMKPNSIIWRTLLGACANHNDLDIAEKVKAKISELNSSHDGDFVLLSNVYGAAGR 405
           +++ MPM+PN +IWRTLLGAC  H D D+AE  + +I +L  +H GD+VLLSN+Y +  R
Sbjct: 250 YIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQR 309

Query: 406 WVEKTSVRSWMRSKRIGKEPGCSLINIDQATHEFVSGDDSHPQSEEITKFLSSIIGDLRN 465
           W +   +R  M    + K PG SL+ +    HEF+ GD SHPQS+ I   L  + G LR+
Sbjct: 310 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 369

Query: 466 SGYTPRTENVLHDIDEEEREHSLSYHSEKLAVAFALLSLKDKRTIRIMKNLRICHDCHSF 525
            GY P+  NV  D++EEE+E+++ YHSEK+A+AF L+S  ++  I ++KNLR+C DCH  
Sbjct: 370 EGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLA 429

Query: 526 MKHISDKYERKIIIRDRNRFHHFDKGSCSCRDYW 559
           +K +S  Y R+I++RDR+RFHHF  GSCSC+DYW
Sbjct: 430 IKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7011296.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022963775.10.0e+0099.28pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata][more]
XP_023553606.10.0e+0097.31pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
XP_022967226.10.0e+0096.77pentatricopeptide repeat-containing protein At5g48910-like [Cucurbita maxima][more]
KAG6571551.11.1e-30897.09Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
A8MQA31.7e-13444.19Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q9FI803.5e-13240.52Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Q9FJY71.1e-12538.64Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q8LK931.9e-12541.39Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... [more]
Q9FG161.3e-12341.65Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1HIY80.0e+0099.28pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata... [more]
A0A6J1HRF30.0e+0096.77pentatricopeptide repeat-containing protein At5g48910-like OS=Cucurbita maxima O... [more]
A0A6J1DN441.1e-28286.56pentatricopeptide repeat-containing protein At4g21065-like OS=Momordica charanti... [more]
A0A5A7T8N19.6e-27483.87Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BGQ39.6e-27483.87pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=36... [more]
Match NameE-valueIdentityDescription
AT4G21065.11.2e-13544.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48910.12.5e-13340.52Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G66520.17.8e-12738.64Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G02980.11.3e-12641.39Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21065.25.1e-12645.81Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 151..186
e-value: 9.8E-5
score: 20.3
coord: 121..149
e-value: 1.1E-4
score: 20.1
coord: 254..286
e-value: 5.0E-8
score: 30.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 250..297
e-value: 5.9E-11
score: 42.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 325..350
e-value: 0.016
score: 15.5
coord: 151..177
e-value: 8.4E-4
score: 19.4
coord: 123..148
e-value: 2.6E-4
score: 21.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 251..285
score: 11.99172
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 118..152
score: 9.010246
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 106..206
e-value: 1.4E-19
score: 72.1
coord: 4..105
e-value: 1.6E-7
score: 32.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 225..444
e-value: 2.8E-39
score: 137.3
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 424..547
e-value: 6.9E-40
score: 135.9
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 34..517
NoneNo IPR availablePANTHERPTHR47926:SF195PENTATRICOPEPTIDE (PPR) REPEAT PROTEINcoord: 34..517

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16906-RACarg16906-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding