Carg16872 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16872
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CDT1-like protein b
Location	Carg_Chr19: 548398 .. 551464 (-)
RNA-Seq Expression	Carg16872
Synteny	Carg16872

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTGCCCTTTCCCATCTCTTCCAATCGGTAACAATGGACGCCTCCGAGAAGATTTCTTCTCCATCATCATCTTTACCCTTCAAATCGAAGAAAACTTTGCGCTCCAACTCCAAATCCTTACTTCAGGATCAACAATCTTTGAGTTCCAAGACGCCGGAGAAGCCGGCGGAGCTCACTACCAGAACTAGGAGCCGTAAGGTTGCGCTTTCAATCAAAGAGGTGCGGCGAGCTGCTGAGAGTGTCCGTGAATCTAATCGTCAGCTGCCTCGTGATCTGACCACGGAAGGGAGTAAATCGGTCAGAAGGCAGATAGATTCGTGGTCGAATGAATGTCCATCTAGTAGATTCAAGACTTCTGTTGATAAGTCTAAGAAGTTGCCTGAGAAGTAAGTCTTTCGTTTCTTGATCTTGAATTTGGATTATTGATGGCTGGTTGCTTTTAGATCTAGTATCAATGTTTAGTGAATGAATGTTGTTACTTTGGTGTTTGCAGATTTGAATTTCTGAGCAAGTTCTTTGATAGCTTGGACTCTGTAATGCGGTTGTTACGATTTAAAGGTGTAGCATCCAACTTCTCTAATGTGTGTCCCAAGATCGAAGTCCTTACTGATAGGTACTTATTCTGCCTTCTACATTGACTTTTCCTCTCGGATGCCATGGTCAATTTATGTGTTGATACTGCAGTTAATTTAGTATTTTGGATAGTACATTGAATTATTTATCTTACTTAGGTGCTTAAGTAACACTGAAGAAGTTTATTAGATCCTCTATTGTTAGCTTGTAACAAAATACTGCTTGTTTGTAATGATAATTGATTAAGAACAATGACGAATAACTTCGTTCTAAATATATGATTATTTGTTCGTGAAGTGTAATTGTTTTTGTTCTGATATAGGAAGTTAAGCCTCACAAGATTGGTTTTCGAACCTTCAGTCTTGATTTTTTGGCCACTAGTTCTTTGACTTATTTTACTACTCTGAGAGCATCTCTAGACCGTATGTTGTGTTTTCTGATTCTGAACTTGATGGCTGCGAGTGCAGGAGGTTTTCATATGGTCATTTGGCCCAAATGAAGTTTATTGTACCTGAAGCAATAGAGCTTAAGAAGGTCATGATCTTTGATGAGCGGACCAGTTGTATGAAGCCGGATCTTCACATATCATTCAATTTTAGCGTGCTAGATAATAAAGATAACCTTGAAACAGGAAACCAGTATATGCAATTGAGAAAGTTGTTCAAGGCACGGCTTTCAGAATTTGCAAGTTCCCATCCAGAGGTATGCTGCATTTTCCTTCTCTGATTTGTAGATGTAGTATTTGTTTGTGTTTGTGGTCATGAATCCTAGAATGTTAATTCTCTCTCTATAGTTACTGGTCTTAAATGTGAACTTGGGATCCCTCTGTTATTTGCTAGTGCTTGCTCTGATTTCTAGTTGTGCTACATAATGTCTTAAAACAGAAGCATTGATGATGCCTGCTGGATGTGCTTGTCCCAAATTGTGTAGTGTAGGAATTAAGTTGGTGGTCATACCAAGGATTGATAGCATTCTGGTCACTTTAGTTTATAGTTATCATTTATTTGATGACCACTCATGATGCTTGATTTTTCTTATTCAATTTGGAAGCCAATCTTCTCCTGTAGTATTTTGGAAGTATTGTATCCCCCGTCTTCAAATTTTAACATTCTAAGACATGCTTTTATATTCAGATTGATGATGTTCCAAAGGATTTGCTGCCAAAGCCATTCAATTGCTCAAGTCAAGATCTTTTTCCAAAAACCAACTTTTTATCATCTGTCAAGGCACCAATTGAGCAATTGGCCGCTGAGCAACCAGCAATTTCATCCACAAGTGTCGCAGAAGATCATTCAAACGAAAATCAAGGTTTTCGGATAATTAAATCTACCATGACTGTTTCTGGCCCAAGTAAACAGAAGGAATTAATTGGGTTATCTCATTTTTCACCATCTTTTACCCGGCATTTCTCTCAGAAAGTTAACAGAGAAATGGAGAAAACTGGCCAAGCTGCTAAGCGTTCTGATCAAATTCCATTTTGTTCCGATGCCGAGACAAAAATCGAGACAGAATCTTCATCTATGCCTTTCTCCCCTGTTAAACTACCTTCCAACTCAACCTGCAATTCAAACTGTCCTGAAAACTATGCTTCTCCCCTCCGTTCTTCAGCATTGCCTCTTCCCACAACTCCCAGTAATATGGCAGCTAGAGTAGCCCTTACAAATGAAGACGACCCAACTGCAAAAACTAGTGATATAAAATCAACTCCTGCAAAGCTTGTTTCAACCCCGGCTCGTCTGATGGCTAGCACACCTGCAATGGCTCCACCGAAAAGAAGCTCCATGAGTCCCGATGACGATGATTCTTCTCGCTCAGCAAACAAGTTGGTTCGACGTCCTCCCCGCTCTAGATCACTTGTATTTGACACTCCCACAAAGGAAGATAAAAATGACGATCAAAAAGATCTTACAAGATGTGCATCACCTGACGATGACATCTTAGATATTCTACCTCAGAGCCTTGTGCAATCGGTATGACCATTCCCTATCTTATAACCAATTCTCTCTTATTTTGTGCTTGATTGAAACTTCCATTTGCAGTCAAGCATGGCAATTTATGTTAATAATTTCTCGTGTTCTCAATTTGAATAATTTCTCGTGTTCTCAATTTGCAGATCAGAGAGAAAGAAAGGAAGATCAAAGAAGAACAAATGCCGGCAATATCTCAAGCTAAGAGACGACAGAAAATGATTGCCAGCCTACCCAAACTCTTCAATGCTATCTTCTTCTTGTTCCACAAGCGCACAGTTATCACCAGGGAGGAGCTAATATACAAAATAATCGTTGGCAACGTGGATATTGTTGACAAAAGTAAGCAAATAGCGCATCTATTATAATTACATTCCATTTTATTTTAGCTTGTCTGGAGCTGATTCTGATTCATTTCATATGTTCTTACTTGTAGAGGAAATTGAAGAACAGATAAATTTGTTGCTAGAACTTGTCCCGAGTTGGCTGATTTCTGAGCATTTCATGGACCAGTGCTGA

mRNA sequence

TCTCTCTCTCTGCCCTTTCCCATCTCTTCCAATCGGTAACAATGGACGCCTCCGAGAAGATTTCTTCTCCATCATCATCTTTACCCTTCAAATCGAAGAAAACTTTGCGCTCCAACTCCAAATCCTTACTTCAGGATCAACAATCTTTGAGTTCCAAGACGCCGGAGAAGCCGGCGGAGCTCACTACCAGAACTAGGAGCCGTAAGGTTGCGCTTTCAATCAAAGAGGTGCGGCGAGCTGCTGAGAGTGTCCGTGAATCTAATCGTCAGCTGCCTCGTGATCTGACCACGGAAGGGAGTAAATCGGTCAGAAGGCAGATAGATTCGTGGTCGAATGAATGTCCATCTAGTAGATTCAAGACTTCTGTTGATAAGTCTAAGAAGTTGCCTGAGAAATTTGAATTTCTGAGCAAGTTCTTTGATAGCTTGGACTCTGTAATGCGGTTGTTACGATTTAAAGGTGTAGCATCCAACTTCTCTAATGTGTGTCCCAAGATCGAAGTCCTTACTGATAGACCGTATGTTGTGTTTTCTGATTCTGAACTTGATGGCTGCGAGTGCAGGAGGTTTTCATATGGTCATTTGGCCCAAATGAAGTTTATTGTACCTGAAGCAATAGAGCTTAAGAAGGTCATGATCTTTGATGAGCGGACCAGTTGTATGAAGCCGGATCTTCACATATCATTCAATTTTAGCGTGCTAGATAATAAAGATAACCTTGAAACAGGAAACCAGTATATGCAATTGAGAAAGTTGTTCAAGGCACGGCTTTCAGAATTTGCAAGTTCCCATCCAGAGATTGATGATGTTCCAAAGGATTTGCTGCCAAAGCCATTCAATTGCTCAAGTCAAGATCTTTTTCCAAAAACCAACTTTTTATCATCTGTCAAGGCACCAATTGAGCAATTGGCCGCTGAGCAACCAGCAATTTCATCCACAAGTGTCGCAGAAGATCATTCAAACGAAAATCAAGGTTTTCGGATAATTAAATCTACCATGACTGTTTCTGGCCCAAGTAAACAGAAGGAATTAATTGGGTTATCTCATTTTTCACCATCTTTTACCCGGCATTTCTCTCAGAAAGTTAACAGAGAAATGGAGAAAACTGGCCAAGCTGCTAAGCGTTCTGATCAAATTCCATTTTGTTCCGATGCCGAGACAAAAATCGAGACAGAATCTTCATCTATGCCTTTCTCCCCTGTTAAACTACCTTCCAACTCAACCTGCAATTCAAACTGTCCTGAAAACTATGCTTCTCCCCTCCGTTCTTCAGCATTGCCTCTTCCCACAACTCCCAGTAATATGGCAGCTAGAGTAGCCCTTACAAATGAAGACGACCCAACTGCAAAAACTAGTGATATAAAATCAACTCCTGCAAAGCTTGTTTCAACCCCGGCTCGTCTGATGGCTAGCACACCTGCAATGGCTCCACCGAAAAGAAGCTCCATGAGTCCCGATGACGATGATTCTTCTCGCTCAGCAAACAAGTTGGTTCGACGTCCTCCCCGCTCTAGATCACTTGTATTTGACACTCCCACAAAGGAAGATAAAAATGACGATCAAAAAGATCTTACAAGATGTGCATCACCTGACGATGACATCTTAGATATTCTACCTCAGAGCCTTGTGCAATCGATCAGAGAGAAAGAAAGGAAGATCAAAGAAGAACAAATGCCGGCAATATCTCAAGCTAAGAGACGACAGAAAATGATTGCCAGCCTACCCAAACTCTTCAATGCTATCTTCTTCTTGTTCCACAAGCGCACAGTTATCACCAGGGAGGAGCTAATATACAAAATAATCGTTGGCAACGTGGATATTGTTGACAAAAAGGAAATTGAAGAACAGATAAATTTGTTGCTAGAACTTGTCCCGAGTTGGCTGATTTCTGAGCATTTCATGGACCAGTGCTGA

Coding sequence (CDS)

ATGGACGCCTCCGAGAAGATTTCTTCTCCATCATCATCTTTACCCTTCAAATCGAAGAAAACTTTGCGCTCCAACTCCAAATCCTTACTTCAGGATCAACAATCTTTGAGTTCCAAGACGCCGGAGAAGCCGGCGGAGCTCACTACCAGAACTAGGAGCCGTAAGGTTGCGCTTTCAATCAAAGAGGTGCGGCGAGCTGCTGAGAGTGTCCGTGAATCTAATCGTCAGCTGCCTCGTGATCTGACCACGGAAGGGAGTAAATCGGTCAGAAGGCAGATAGATTCGTGGTCGAATGAATGTCCATCTAGTAGATTCAAGACTTCTGTTGATAAGTCTAAGAAGTTGCCTGAGAAATTTGAATTTCTGAGCAAGTTCTTTGATAGCTTGGACTCTGTAATGCGGTTGTTACGATTTAAAGGTGTAGCATCCAACTTCTCTAATGTGTGTCCCAAGATCGAAGTCCTTACTGATAGACCGTATGTTGTGTTTTCTGATTCTGAACTTGATGGCTGCGAGTGCAGGAGGTTTTCATATGGTCATTTGGCCCAAATGAAGTTTATTGTACCTGAAGCAATAGAGCTTAAGAAGGTCATGATCTTTGATGAGCGGACCAGTTGTATGAAGCCGGATCTTCACATATCATTCAATTTTAGCGTGCTAGATAATAAAGATAACCTTGAAACAGGAAACCAGTATATGCAATTGAGAAAGTTGTTCAAGGCACGGCTTTCAGAATTTGCAAGTTCCCATCCAGAGATTGATGATGTTCCAAAGGATTTGCTGCCAAAGCCATTCAATTGCTCAAGTCAAGATCTTTTTCCAAAAACCAACTTTTTATCATCTGTCAAGGCACCAATTGAGCAATTGGCCGCTGAGCAACCAGCAATTTCATCCACAAGTGTCGCAGAAGATCATTCAAACGAAAATCAAGGTTTTCGGATAATTAAATCTACCATGACTGTTTCTGGCCCAAGTAAACAGAAGGAATTAATTGGGTTATCTCATTTTTCACCATCTTTTACCCGGCATTTCTCTCAGAAAGTTAACAGAGAAATGGAGAAAACTGGCCAAGCTGCTAAGCGTTCTGATCAAATTCCATTTTGTTCCGATGCCGAGACAAAAATCGAGACAGAATCTTCATCTATGCCTTTCTCCCCTGTTAAACTACCTTCCAACTCAACCTGCAATTCAAACTGTCCTGAAAACTATGCTTCTCCCCTCCGTTCTTCAGCATTGCCTCTTCCCACAACTCCCAGTAATATGGCAGCTAGAGTAGCCCTTACAAATGAAGACGACCCAACTGCAAAAACTAGTGATATAAAATCAACTCCTGCAAAGCTTGTTTCAACCCCGGCTCGTCTGATGGCTAGCACACCTGCAATGGCTCCACCGAAAAGAAGCTCCATGAGTCCCGATGACGATGATTCTTCTCGCTCAGCAAACAAGTTGGTTCGACGTCCTCCCCGCTCTAGATCACTTGTATTTGACACTCCCACAAAGGAAGATAAAAATGACGATCAAAAAGATCTTACAAGATGTGCATCACCTGACGATGACATCTTAGATATTCTACCTCAGAGCCTTGTGCAATCGATCAGAGAGAAAGAAAGGAAGATCAAAGAAGAACAAATGCCGGCAATATCTCAAGCTAAGAGACGACAGAAAATGATTGCCAGCCTACCCAAACTCTTCAATGCTATCTTCTTCTTGTTCCACAAGCGCACAGTTATCACCAGGGAGGAGCTAATATACAAAATAATCGTTGGCAACGTGGATATTGTTGACAAAAAGGAAATTGAAGAACAGATAAATTTGTTGCTAGAACTTGTCCCGAGTTGGCTGATTTCTGAGCATTTCATGGACCAGTGCTGA

Protein sequence

MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSIKEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGHLAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIEEQINLLLELVPSWLISEHFMDQC

Homology

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: KAG7011262.1 (CDT1-like protein a, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
           FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH
Sbjct: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN
Sbjct: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480
           MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA
Sbjct: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600

Query: 601 EQINLLLELVPSWLISEHFMDQC 624
           EQINLLLELVPSWLISEHFMDQC
Sbjct: 601 EQINLLLELVPSWLISEHFMDQC 623

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: KAG6571515.1 (CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1109.7 bits (2869), Expect = 0.0e+00
Identity = 595/614 (96.91%), Postives = 597/614 (97.23%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSN+CPSSRFKTSVDKSKKLPEKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNKCPSSRFKTSVDKSKKLPEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
           FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN
Sbjct: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480
           MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA
Sbjct: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 598

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPDWI 598

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: XP_022963958.1 (CDT1-like protein b [Cucurbita moschata])

HSP 1 Score: 1098.2 bits (2839), Expect = 0.0e+00
Identity = 591/614 (96.25%), Postives = 593/614 (96.58%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEK AELTTRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKSAELTTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKL EKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLTEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
            LSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 ILSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPFCSDAETKIETESSSMPFSPVKLPS STCNSNCPENYASPLRSSALPLPTTPSN
Sbjct: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSYSTCNSNCPENYASPLRSSALPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480
           MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPD+DDSSRSA
Sbjct: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDEDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 598

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPDWI 598

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: XP_023553630.1 (CDT1-like protein b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1086.6 bits (2809), Expect = 0.0e+00
Identity = 586/614 (95.44%), Postives = 591/614 (96.25%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKV LSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVVLSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNE PSSRFKTSVDKSKKLPEKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKSKKLPEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
           FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLD KD+LETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDYKDDLETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS S
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS-S 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTV+GPSKQKELIGLSHFSPSFTR FSQKVNRE EKTGQAAK
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVTGPSKQKELIGLSHFSPSFTRRFSQKVNRETEKTGQAAK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPFCSDAETK+ETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN
Sbjct: 361 RSDQIPFCSDAETKVETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480
           MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA
Sbjct: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGN+DIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKKEIE 597

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPDWI 597

[Close]

BLAST of Carg16872 vs. NCBI nr
Match: XP_022967387.1 (CDT1-like protein b [Cucurbita maxima])

HSP 1 Score: 1068.5 bits (2762), Expect = 2.1e-308
Identity = 575/614 (93.65%), Postives = 588/614 (95.77%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEK AEL+TRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKSAELSTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNE PSSRFKTSVDK KKLPEKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKYKKLPEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
           FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKV+IFDERTSCMKPDLHISFNF VLDNKD++ETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVLIFDERTSCMKPDLHISFNFGVLDNKDDVETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTV+GPSKQKEL+GLSHFSPSFTR FSQK +REMEKTGQA+K
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVTGPSKQKELMGLSHFSPSFTRRFSQKGSREMEKTGQASK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPF SDAETKIETESSSM FSPVKLPSNSTCNSNCPENYASPLRSSA PLPTTPSN
Sbjct: 361 RSDQIPFGSDAETKIETESSSMLFSPVKLPSNSTCNSNCPENYASPLRSSAFPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480
           MAARVA+TNED+PTAKTSDI+STPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA
Sbjct: 421 MAARVAITNEDEPTAKTSDIESTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGN+DIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKKEIE 598

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPEWI 598

[Close]

BLAST of Carg16872 vs. ExPASy Swiss-Prot
Match: Q9SJW9 (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.7e-72
Identity = 230/627 (36.68%), Postives = 330/627 (52.63%), Query Frame = 0


Query: 7   ISSPSS--SLPFKSKKTL-----RSNSKSLLQDQQSLSSKTPEKPAE-LTTRTRSRKVAL 66
           +S+P S  S+PFKSKK L      S S++   +  S++  TPEKP E + +R+R+R VAL
Sbjct: 1   MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60

Query: 67  SIKEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSK-KLPE 126
           S+KE+R+AA S R S      D     +KS R   DS S+  PS R  ++ +  K KLPE
Sbjct: 61  SVKEIRQAAGSRRRS-----EDPVASSAKS-RLFFDS-SSSSPSKRKSSNKNAEKEKLPE 120

Query: 127 KFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFS 186
           K+E L KFF++LD+ M L + +G    FSN+  +IE LT+                RRF 
Sbjct: 121 KYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTE----------------RRFC 180

Query: 187 YGHLAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRK 246
           Y HLAQ+K I+PEAIE+K+V+I DE T CMKPDLH++ N   ++  D  ++ ++ + LRK
Sbjct: 181 YSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRK 240

Query: 247 LFKARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAIS 306
           +F+ARL++F  +HP+ D+VP++ LP+PFN                + P+E    E   +S
Sbjct: 241 VFRARLADFVKAHPQGDEVPEEPLPEPFN---------------RRKPVENSNVEVKRVS 300

Query: 307 STSVAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQ 366
           S                             +E+  +    P+     S   +  ++ T  
Sbjct: 301 SL---------------------------MEEMASI----PASKLFSSPITSTPVKTTSS 360

Query: 367 AAKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTT 426
            AK            T  +   +  P  P   P+  T +             + LP P  
Sbjct: 361 LAK-----------PTSSQINIAPTPTKPTSTPAKQTLS-----------EINILPTPVK 420

Query: 427 PSNMAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDD-S 486
           P +  A+   T        T  I +TP +  STPARLM+++ A  P KRS+   + DD S
Sbjct: 421 PVSTLAKFPST--PAIIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDDIS 480

Query: 487 SRSANKLVRRPPRSRSLVFDTPTKEDKNDDQKD-------LTRCASPDDDILDILPQSLV 546
           +    KLVR   RS SL FD+  ++++  D  D            S DD+IL ILP  L 
Sbjct: 481 ADPPTKLVR---RSLSLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSDDEILSILPDKLR 531

Query: 547 QSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFH--KRTVITREELIYKII 606
            +I+E+ERK  E+Q PAIS AKRR+KMIA LPKLFN I +L    +R VIT+EEL++KII
Sbjct: 541 HAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKII 531

Query: 607 VGNVDIVDKKEIEEQINLLLELVPSWL 615
            G+ DI D+KE+EEQ+ LL E+VP W+
Sbjct: 601 AGHSDITDRKEVEEQLILLQEIVPEWM 531

[Close]

BLAST of Carg16872 vs. ExPASy Swiss-Prot
Match: Q9M1S9 (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.1e-44
Identity = 178/566 (31.45%), Postives = 262/566 (46.29%), Query Frame = 0


Query: 87  KSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFS 146
           K+V+RQI S S+  P S          KLPE+FE L +FF+ LD+ +RLL+ KG ++ ++
Sbjct: 27  KTVKRQIFS-SSPKPESVI--------KLPERFEILEEFFNGLDTAIRLLKLKGSSTTYA 86

Query: 147 NVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGHLAQMKFIVPEAIELKKVMIFDERTSC 206
           N+CPKIE LT+                R FSY HLAQMK I PEAIELK+V+ F E T C
Sbjct: 87  NICPKIEYLTN----------------RIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCC 146

Query: 207 MKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPEIDDVPKDLLPKPFN 266
           MKP LHI  N   +  +D +  G +YM+LRK+F ++L +F  +HP+ D++PK+LLP+PFN
Sbjct: 147 MKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFHSKLVDFRKAHPK-DEIPKELLPEPFN 206

Query: 267 CSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFRIIKSTMTVSGPSK 326
              +D +          + I  +   +P +           E  GF +            
Sbjct: 207 SPQRDSY----------SGIVSVGLGEPKL-----------EVGGFDV------------ 266

Query: 327 QKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAETKIETESSSMPFSP 386
                                    ME                    +IE E   +    
Sbjct: 267 ------------------------HME--------------------EIEQEEQDV---- 326

Query: 387 VKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAK 446
                    N   P+              +T S++ +R+  T   D         STP+K
Sbjct: 327 ---------NKVIPD--------------STLSHIESRIVETPVKD--------LSTPSK 386

Query: 447 LVSTPARLMASTPAMAPPKRS-SMSPD--DDDSSRSANKLVRRPPRSRSLVFDTPTKEDK 506
            +STP RLM++TP +   KR   ++P+  DD+S RS N L R P  SRSL FD  T E+ 
Sbjct: 387 DLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLARGP--SRSLNFD--TFEED 446

Query: 507 NDDQKDLTRCASPDDDILDILPQSLVQSIR-----------EKERKIKEEQMPAISQAKR 566
             ++ D+      DD  ++     L+QS++           E+E  +K++        K 
Sbjct: 447 AIEKDDIGN--ESDDKGINYEEDGLLQSVKGPSRSLNFDTLEEETIVKDDISNESGDEKS 447

Query: 567 R-------------QKMIA---------SLPKLFNAIFFLFH--KRTVITREELIYKIIV 615
                         Q MI          +LP+L N I  +FH   RTVIT+EEL+YKII 
Sbjct: 507 NYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKIIA 447

[Close]

BLAST of Carg16872 vs. ExPASy TrEMBL
Match: A0A6J1HJE5 (CDT1-like protein b OS=Cucurbita moschata OX=3662 GN=LOC111464103 PE=3 SV=1)

HSP 1 Score: 1098.2 bits (2839), Expect = 0.0e+00
Identity = 591/614 (96.25%), Postives = 593/614 (96.58%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEK AELTTRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKSAELTTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKL EKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLTEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
            LSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 ILSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPFCSDAETKIETESSSMPFSPVKLPS STCNSNCPENYASPLRSSALPLPTTPSN
Sbjct: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSYSTCNSNCPENYASPLRSSALPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480
           MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPD+DDSSRSA
Sbjct: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDEDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 598

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPDWI 598

[Close]

BLAST of Carg16872 vs. ExPASy TrEMBL
Match: A0A6J1HQP8 (CDT1-like protein b OS=Cucurbita maxima OX=3661 GN=LOC111466932 PE=3 SV=1)

HSP 1 Score: 1068.5 bits (2762), Expect = 1.0e-308
Identity = 575/614 (93.65%), Postives = 588/614 (95.77%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEK AEL+TRTRSRKVALSI
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKSAELSTRTRSRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNE PSSRFKTSVDK KKLPEKFE
Sbjct: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKYKKLPEKFE 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
           FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD                RRFSYGH
Sbjct: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQMKFIVPEAIELKKV+IFDERTSCMKPDLHISFNF VLDNKD++ETGNQYMQLRKLFK
Sbjct: 181 LAQMKFIVPEAIELKKVLIFDERTSCMKPDLHISFNFGVLDNKDDVETGNQYMQLRKLFK 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
           ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS
Sbjct: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300

Query: 301 VAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAK 360
           VAEDHSNENQGFRIIKSTMTV+GPSKQKEL+GLSHFSPSFTR FSQK +REMEKTGQA+K
Sbjct: 301 VAEDHSNENQGFRIIKSTMTVTGPSKQKELMGLSHFSPSFTRRFSQKGSREMEKTGQASK 360

Query: 361 RSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSN 420
           RSDQIPF SDAETKIETESSSM FSPVKLPSNSTCNSNCPENYASPLRSSA PLPTTPSN
Sbjct: 361 RSDQIPFGSDAETKIETESSSMLFSPVKLPSNSTCNSNCPENYASPLRSSAFPLPTTPSN 420

Query: 421 MAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480
           MAARVA+TNED+PTAKTSDI+STPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA
Sbjct: 421 MAARVAITNEDEPTAKTSDIESTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSA 480

Query: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540
           NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK
Sbjct: 481 NKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIK 540

Query: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKEIE 600
           EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGN+DIVDKKEIE
Sbjct: 541 EEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKKEIE 598

Query: 601 EQINLLLELVPSWL 615
           EQINLLLELVP W+
Sbjct: 601 EQINLLLELVPEWI 598

[Close]

BLAST of Carg16872 vs. ExPASy TrEMBL
Match: A0A6J1CX08 (CDT1-like protein b OS=Momordica charantia OX=3673 GN=LOC111015352 PE=3 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 5.6e-214
Identity = 440/627 (70.18%), Postives = 501/627 (79.90%), Query Frame = 0


Query: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSI 60
           MDASE  S  SSS+ F+SKKT  SNSKSLL DQQS+SS TPEKPAEL+TRTR+RKVALSI
Sbjct: 1   MDASETTS--SSSIRFRSKKTFHSNSKSLLPDQQSVSSMTPEKPAELSTRTRNRKVALSI 60

Query: 61  KEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFE 120
           KEVR+AAESVRESN+Q P D  T   KSVRRQIDSW +  P++R K+++DK  ++PEKF+
Sbjct: 61  KEVRKAAESVRESNKQQPPD-RTGMRKSVRRQIDSWPDVTPANRSKSAIDKPMEIPEKFQ 120

Query: 121 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 180
            LS FFDSLD  MRLLR +G+ASNFSN+CPKIE LTD                RRFSYGH
Sbjct: 121 ILSLFFDSLDRAMRLLRLRGLASNFSNICPKIEYLTD----------------RRFSYGH 180

Query: 181 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 240
           LAQ+KFI+PEAIELKKV +FDERTSCMKPDLHISFN  VLDN+++LETG+Q + LRKLF 
Sbjct: 181 LAQLKFILPEAIELKKVHVFDERTSCMKPDLHISFNLGVLDNQESLETGSQNLNLRKLFC 240

Query: 241 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 300
            RLSEF SSHPEID+VPK LLP+PFN SSQDLF KTN LS V     + A EQPAISST+
Sbjct: 241 TRLSEFVSSHPEIDEVPKGLLPEPFNRSSQDLFRKTNSLSPV-----ETAPEQPAISSTN 300

Query: 301 VAE----DHSNENQGFRIIKSTM--TVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREME 360
            AE    +HS E+ GFRI+KST+  TV  PSKQK LIG SHFS SF+R FSQK V+RE+E
Sbjct: 301 DAEGIPFNHSEESLGFRIVKSTVPRTVVDPSKQKNLIGASHFSQSFSRRFSQKVVSREVE 360

Query: 361 KTGQAAKRSDQIPFCSDAETKIETE-----SSSMPFSPVKLPSNSTCNSNCPENYASPLR 420
           KT QA +   Q P  SDAET I+TE      SS P SPVKLPSNSTC+SN  ENYASP+R
Sbjct: 361 KTDQATRPCAQNPSHSDAETNIKTEFCNAVPSSKPLSPVKLPSNSTCDSNYFENYASPIR 420

Query: 421 SSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSS 480
            SA PLP+TP +MA R   TNED P+AKT+DI STPAKLVSTP RLMA TPAM PPKRSS
Sbjct: 421 VSAPPLPSTPIDMAVRGTSTNEDYPSAKTNDIDSTPAKLVSTPVRLMAITPAMPPPKRSS 480

Query: 481 MSPDDDDSSRSANKLVRRPPRSRSLVFDTPTKEDKNDDQ-KDLTRCASPDDDILDILPQS 540
            SP  DDSS SANKL+RRPPRSRSL+FDTPTKEDKN+D+  D T   S DDDILDILPQS
Sbjct: 481 RSP-HDDSSWSANKLIRRPPRSRSLIFDTPTKEDKNEDEIDDGTSSTSLDDDILDILPQS 540

Query: 541 LVQSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKII 600
           L+QSIREKERK+KEEQ PAISQAKRR+KMIA+LPKLFNAI+FLFHKRTVIT+EELI+KII
Sbjct: 541 LLQSIREKERKVKEEQTPAISQAKRRRKMIANLPKLFNAIYFLFHKRTVITKEELIFKII 600

Query: 601 VGNVDIVDKKEIEEQINLLLELVPSWL 615
            GNVDIVD++EIEEQ+ LLLELVP W+
Sbjct: 601 SGNVDIVDRREIEEQLALLLELVPEWI 602

[Close]

BLAST of Carg16872 vs. ExPASy TrEMBL
Match: A0A5A7T8X4 (CDT1-like protein a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00930 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 2.3e-207
Identity = 430/616 (69.81%), Postives = 482/616 (78.25%), Query Frame = 0


Query: 2   DASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSIK 61
           DAS  ISSPSS+LPFKSKK L SN KSLL+D QSLSSKTPEKPAE   RTR RKVALSIK
Sbjct: 3   DASHNISSPSSTLPFKSKKNLGSNFKSLLKDPQSLSSKTPEKPAE---RTRKRKVALSIK 62

Query: 62  EVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVD-KSKKLPEKFE 121
           EV+RAA+SV ESNRQLP DLTT+GSK VRRQ+DS SNE  SSR KT VD KS KLPEKFE
Sbjct: 63  EVKRAAQSVNESNRQLPHDLTTKGSKLVRRQMDSSSNESLSSRSKTCVDKKSNKLPEKFE 122

Query: 122 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 181
            L KFFD LDS MRLLRFKGVASNFSNVC KIEVLTD                RRFSY H
Sbjct: 123 LLCKFFDCLDSAMRLLRFKGVASNFSNVCTKIEVLTD----------------RRFSYNH 182

Query: 182 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 241
           LAQ+KFI+PEAI LKKV++FDERTSCMKPDLHISFNF +L++K+     +QYMQLRKLF+
Sbjct: 183 LAQLKFILPEAIMLKKVVVFDERTSCMKPDLHISFNFDILESKE-----DQYMQLRKLFR 242

Query: 242 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 301
            RLSEFASSHPEIDDVPKDLLP PFN  SQ+LFPKTN LSSVK  IEQL  EQP  S+  
Sbjct: 243 TRLSEFASSHPEIDDVPKDLLPNPFNFRSQNLFPKTNPLSSVKTSIEQLGPEQPMPSAEG 302

Query: 302 VAEDHS-NENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQA 361
           +  +H   ENQGFRIIKS  T  GP+K+KEL+GLSHFSPS +R FSQK V+REMEKT   
Sbjct: 303 LLSNHHLEENQGFRIIKS--TDHGPNKKKELLGLSHFSPSISRLFSQKVVDREMEKTH-- 362

Query: 362 AKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTP 421
                      +     ET S++ PFSP+KL SNST N +C E YASP+ SS LP+PTTP
Sbjct: 363 ----------VETNMDAETSSTTKPFSPIKLSSNSTSNLHCVEKYASPICSSTLPIPTTP 422

Query: 422 SNMAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSR 481
           SNM   V++  ED   AK +DI STPAK VSTP RLMASTPA++ PKRSSM+P DDD + 
Sbjct: 423 SNMVGIVSMRKEDGQYAKANDIDSTPAKFVSTPDRLMASTPAISAPKRSSMTP-DDDFAY 482

Query: 482 SANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERK 541
           S NKLVRRPPRSRSLVFDTPTKEDKN    D+    S DDDILD+L QSLVQSIREKERK
Sbjct: 483 STNKLVRRPPRSRSLVFDTPTKEDKNKVDTDV----SLDDDILDVLSQSLVQSIREKERK 542

Query: 542 IKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKE 601
           IKE+QMPAI+QAKRRQKMIA LPKLFNAIFFL+HKRTVI REEL+ KIIVG+VDI+D++E
Sbjct: 543 IKEDQMPAITQAKRRQKMIAGLPKLFNAIFFLYHKRTVIKREELLNKIIVGSVDILDRRE 575

Query: 602 IEEQINLLLELVPSWL 615
           IEEQ++LL ELVP W+
Sbjct: 603 IEEQLDLLFELVPEWI 575

[Close]

BLAST of Carg16872 vs. ExPASy TrEMBL
Match: A0A1S3BGW9 (CDT1-like protein a, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489888 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 2.3e-207
Identity = 430/616 (69.81%), Postives = 482/616 (78.25%), Query Frame = 0


Query: 2   DASEKISSPSSSLPFKSKKTLRSNSKSLLQDQQSLSSKTPEKPAELTTRTRSRKVALSIK 61
           DAS  ISSPSS+LPFKSKK L SN KSLL+D QSLSSKTPEKPAE   RTR RKVALSIK
Sbjct: 3   DASHNISSPSSTLPFKSKKNLGSNFKSLLKDPQSLSSKTPEKPAE---RTRKRKVALSIK 62

Query: 62  EVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVD-KSKKLPEKFE 121
           EV+RAA+SV ESNRQLP DLTT+GSK VRRQ+DS SNE  SSR KT VD KS KLPEKFE
Sbjct: 63  EVKRAAQSVNESNRQLPHDLTTKGSKLVRRQMDSSSNESLSSRSKTCVDKKSNKLPEKFE 122

Query: 122 FLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGH 181
            L KFFD LDS MRLLRFKGVASNFSNVC KIEVLTD                RRFSY H
Sbjct: 123 LLCKFFDCLDSAMRLLRFKGVASNFSNVCTKIEVLTD----------------RRFSYNH 182

Query: 182 LAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFK 241
           LAQ+KFI+PEAI LKKV++FDERTSCMKPDLHISFNF +L++K+     +QYMQLRKLF+
Sbjct: 183 LAQLKFILPEAIMLKKVVVFDERTSCMKPDLHISFNFDILESKE-----DQYMQLRKLFR 242

Query: 242 ARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTS 301
            RLSEFASSHPEIDDVPKDLLP PFN  SQ+LFPKTN LSSVK  IEQL  EQP  S+  
Sbjct: 243 TRLSEFASSHPEIDDVPKDLLPNPFNFRSQNLFPKTNPLSSVKTSIEQLGPEQPMPSAEG 302

Query: 302 VAEDHS-NENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQA 361
           +  +H   ENQGFRIIKS  T  GP+K+KEL+GLSHFSPS +R FSQK V+REMEKT   
Sbjct: 303 LLSNHHLEENQGFRIIKS--TDHGPNKKKELLGLSHFSPSISRLFSQKVVDREMEKTH-- 362

Query: 362 AKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTP 421
                      +     ET S++ PFSP+KL SNST N +C E YASP+ SS LP+PTTP
Sbjct: 363 ----------VETNMDAETSSTTKPFSPIKLSSNSTSNLHCVEKYASPICSSTLPIPTTP 422

Query: 422 SNMAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSR 481
           SNM   V++  ED   AK +DI STPAK VSTP RLMASTPA++ PKRSSM+P DDD + 
Sbjct: 423 SNMVGIVSMRKEDGQYAKANDIDSTPAKFVSTPDRLMASTPAISAPKRSSMTP-DDDFAY 482

Query: 482 SANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERK 541
           S NKLVRRPPRSRSLVFDTPTKEDKN    D+    S DDDILD+L QSLVQSIREKERK
Sbjct: 483 STNKLVRRPPRSRSLVFDTPTKEDKNKVDTDV----SLDDDILDVLSQSLVQSIREKERK 542

Query: 542 IKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKKE 601
           IKE+QMPAI+QAKRRQKMIA LPKLFNAIFFL+HKRTVI REEL+ KIIVG+VDI+D++E
Sbjct: 543 IKEDQMPAITQAKRRQKMIAGLPKLFNAIFFLYHKRTVIKREELLNKIIVGSVDILDRRE 575

Query: 602 IEEQINLLLELVPSWL 615
           IEEQ++LL ELVP W+
Sbjct: 603 IEEQLDLLFELVPEWI 575

[Close]

BLAST of Carg16872 vs. TAIR 10
Match: AT2G31270.1 (homolog of yeast CDT1 A )

HSP 1 Score: 274.6 bits (701), Expect = 1.9e-73
Identity = 230/627 (36.68%), Postives = 330/627 (52.63%), Query Frame = 0


Query: 7   ISSPSS--SLPFKSKKTL-----RSNSKSLLQDQQSLSSKTPEKPAE-LTTRTRSRKVAL 66
           +S+P S  S+PFKSKK L      S S++   +  S++  TPEKP E + +R+R+R VAL
Sbjct: 1   MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60

Query: 67  SIKEVRRAAESVRESNRQLPRDLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSK-KLPE 126
           S+KE+R+AA S R S      D     +KS R   DS S+  PS R  ++ +  K KLPE
Sbjct: 61  SVKEIRQAAGSRRRS-----EDPVASSAKS-RLFFDS-SSSSPSKRKSSNKNAEKEKLPE 120

Query: 127 KFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRPYVVFSDSELDGCECRRFS 186
           K+E L KFF++LD+ M L + +G    FSN+  +IE LT+                RRF 
Sbjct: 121 KYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTE----------------RRFC 180

Query: 187 YGHLAQMKFIVPEAIELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRK 246
           Y HLAQ+K I+PEAIE+K+V+I DE T CMKPDLH++ N   ++  D  ++ ++ + LRK
Sbjct: 181 YSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRK 240

Query: 247 LFKARLSEFASSHPEIDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAIS 306
           +F+ARL++F  +HP+ D+VP++ LP+PFN                + P+E    E   +S
Sbjct: 241 VFRARLADFVKAHPQGDEVPEEPLPEPFN---------------RRKPVENSNVEVKRVS 300

Query: 307 STSVAEDHSNENQGFRIIKSTMTVSGPSKQKELIGLSHFSPSFTRHFSQKVNREMEKTGQ 366
           S                             +E+  +    P+     S   +  ++ T  
Sbjct: 301 SL---------------------------MEEMASI----PASKLFSSPITSTPVKTTSS 360

Query: 367 AAKRSDQIPFCSDAETKIETESSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTT 426
            AK            T  +   +  P  P   P+  T +             + LP P  
Sbjct: 361 LAK-----------PTSSQINIAPTPTKPTSTPAKQTLS-----------EINILPTPVK 420

Query: 427 PSNMAARVALTNEDDPTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDD-S 486
           P +  A+   T        T  I +TP +  STPARLM+++ A  P KRS+   + DD S
Sbjct: 421 PVSTLAKFPST--PAIIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDDIS 480

Query: 487 SRSANKLVRRPPRSRSLVFDTPTKEDKNDDQKD-------LTRCASPDDDILDILPQSLV 546
           +    KLVR   RS SL FD+  ++++  D  D            S DD+IL ILP  L 
Sbjct: 481 ADPPTKLVR---RSLSLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSDDEILSILPDKLR 531

Query: 547 QSIREKERKIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFH--KRTVITREELIYKII 606
            +I+E+ERK  E+Q PAIS AKRR+KMIA LPKLFN I +L    +R VIT+EEL++KII
Sbjct: 541 HAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKII 531

Query: 607 VGNVDIVDKKEIEEQINLLLELVPSWL 615
            G+ DI D+KE+EEQ+ LL E+VP W+
Sbjct: 601 AGHSDITDRKEVEEQLILLQEIVPEWM 531

[Close]

BLAST of Carg16872 vs. TAIR 10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B )

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-45
Identity = 178/566 (31.45%), Postives = 262/566 (46.29%), Query Frame = 0


Query: 87  KSVRRQIDSWSNECPSSRFKTSVDKSKKLPEKFEFLSKFFDSLDSVMRLLRFKGVASNFS 146
           K+V+RQI S S+  P S          KLPE+FE L +FF+ LD+ +RLL+ KG ++ ++
Sbjct: 27  KTVKRQIFS-SSPKPESVI--------KLPERFEILEEFFNGLDTAIRLLKLKGSSTTYA 86

Query: 147 NVCPKIEVLTDRPYVVFSDSELDGCECRRFSYGHLAQMKFIVPEAIELKKVMIFDERTSC 206
           N+CPKIE LT+                R FSY HLAQMK I PEAIELK+V+ F E T C
Sbjct: 87  NICPKIEYLTN----------------RIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCC 146

Query: 207 MKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPEIDDVPKDLLPKPFN 266
           MKP LHI  N   +  +D +  G +YM+LRK+F ++L +F  +HP+ D++PK+LLP+PFN
Sbjct: 147 MKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFHSKLVDFRKAHPK-DEIPKELLPEPFN 206

Query: 267 CSSQDLFPKTNFLSSVKAPIEQLAAEQPAISSTSVAEDHSNENQGFRIIKSTMTVSGPSK 326
              +D +          + I  +   +P +           E  GF +            
Sbjct: 207 SPQRDSY----------SGIVSVGLGEPKL-----------EVGGFDV------------ 266

Query: 327 QKELIGLSHFSPSFTRHFSQKVNREMEKTGQAAKRSDQIPFCSDAETKIETESSSMPFSP 386
                                    ME                    +IE E   +    
Sbjct: 267 ------------------------HME--------------------EIEQEEQDV---- 326

Query: 387 VKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAARVALTNEDDPTAKTSDIKSTPAK 446
                    N   P+              +T S++ +R+  T   D         STP+K
Sbjct: 327 ---------NKVIPD--------------STLSHIESRIVETPVKD--------LSTPSK 386

Query: 447 LVSTPARLMASTPAMAPPKRS-SMSPD--DDDSSRSANKLVRRPPRSRSLVFDTPTKEDK 506
            +STP RLM++TP +   KR   ++P+  DD+S RS N L R P  SRSL FD  T E+ 
Sbjct: 387 DLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLARGP--SRSLNFD--TFEED 446

Query: 507 NDDQKDLTRCASPDDDILDILPQSLVQSIR-----------EKERKIKEEQMPAISQAKR 566
             ++ D+      DD  ++     L+QS++           E+E  +K++        K 
Sbjct: 447 AIEKDDIGN--ESDDKGINYEEDGLLQSVKGPSRSLNFDTLEEETIVKDDISNESGDEKS 447

Query: 567 R-------------QKMIA---------SLPKLFNAIFFLFH--KRTVITREELIYKIIV 615
                         Q MI          +LP+L N I  +FH   RTVIT+EEL+YKII 
Sbjct: 507 NYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKIIA 447

The following BLAST results are available for this feature:

BLAST of Carg16872 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011262.1	0.0e+00	100.00	CDT1-like protein a, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571515.1	0.0e+00	96.91	CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022963958.1	0.0e+00	96.25	CDT1-like protein b [Cucurbita moschata]	[more]
XP_023553630.1	0.0e+00	95.44	CDT1-like protein b [Cucurbita pepo subsp. pepo]	[more]
XP_022967387.1	2.1e-308	93.65	CDT1-like protein b [Cucurbita maxima]	[more]

BLAST of Carg16872 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW9	2.7e-72	36.68	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1...	[more]
Q9M1S9	4.1e-44	31.45	CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1	[more]

BLAST of Carg16872 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJE5	0.0e+00	96.25	CDT1-like protein b OS=Cucurbita moschata OX=3662 GN=LOC111464103 PE=3 SV=1	[more]
A0A6J1HQP8	1.0e-308	93.65	CDT1-like protein b OS=Cucurbita maxima OX=3661 GN=LOC111466932 PE=3 SV=1	[more]
A0A6J1CX08	5.6e-214	70.18	CDT1-like protein b OS=Momordica charantia OX=3673 GN=LOC111015352 PE=3 SV=1	[more]
A0A5A7T8X4	2.3e-207	69.81	CDT1-like protein a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G...	[more]
A0A1S3BGW9	2.3e-207	69.81	CDT1-like protein a, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489888 PE=3 ...	[more]

BLAST of Carg16872 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31270.1	1.9e-73	36.68	homolog of yeast CDT1 A	[more]
AT3G54710.1	2.9e-45	31.45	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014939	CDT1 Geminin-binding domain-like	SMART	SM01075	CDT1_2	coord: 115..263 e-value: 1.4E-16 score: 71.1
IPR014939	CDT1 Geminin-binding domain-like	PFAM	PF08839	CDT1	coord: 115..215 e-value: 2.6E-5 score: 24.6
IPR032054	DNA replication factor Cdt1, C-terminal	PFAM	PF16679	CDT1_C	coord: 527..614 e-value: 1.9E-15 score: 57.1
IPR038090	DNA replication factor Cdt1, C-terminal WH domain superfamily	GENE3D	1.10.10.1420		coord: 517..621 e-value: 1.3E-22 score: 82.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 495..516
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	PANTHER	PTHR28637	DNA REPLICATION FACTOR CDT1	coord: 18..158 coord: 174..615
None	No IPR available	CDD	cd08767	Cdt1_c	coord: 518..618 e-value: 3.95281E-28 score: 107.368
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 107..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16872-RA	Carg16872-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0071163	DNA replication preinitiation complex assembly
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0070182	DNA polymerase binding