Carg16840 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16840
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DAR GTPase 3, chloroplastic
Location	Carg_Chr19: 220208 .. 224303 (+)
RNA-Seq Expression	Carg16840
Synteny	Carg16840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTTCATGTTCAGCTATCAGGGCTCTGCCTGCCCACCACTCGTGCAATCCCGACGCGCCATTTTTACTGCCGGAGCGGACCATCCCCGGCATCTCTTACGCCTTCAGCTTCTGCTTCTTTGCCGCACCCCACAATCCAGGTAAACCGCATTCAAGTCGACTTCGTAGTTTTCATTTCATGTAACGAAGCATTTGGGCTGAAATTTGGACTACTAGATGTTTGCGGCAGCTTTTTATAGAAGTTAATTTTTGTGGTAATTGAATAATGTTGTGAAATTGCAAAATGTTTTAGATTGTTGGTGGTAGAACATCAAATTTCCTTGGAGATTTGAGCACCAAAGGTGCGCCTAACAGCGACGTAGTTGAGAAAGATTGGGTTGATTTTGAAGCTGATTTGTATTACTGGACAAATCCATTGCGTCCCGTTCAGGTATGCCAAAAATTCTGGCAATGAAAATAGTGCAAGAAGTTTCTTGATGAATATGCTAAAGAGTATATCCTTTTTCCCCTACATTTTTTTCTGGCAACTCGGCAGTGGTATCCTGGCCATATAGCAAAAACAGAAAAAGAGCTGAAGGATCAACTTAGGCTGATGGATGTTGTGATAGAGGTTCGAGATGCTAGAATACCCATGTCTACAAGTCACCCACAGGTTTTGCATCCAAGTTCTGATTTTGTTCATTCCATTCATTATACTCTTGACTCGCAATTTTTTTGTTTGTTTTTGTTTTGTGTGTTATTTATTGAAATGTTTAGGAGATTTGATGTGAATGTTTTCAGTTCTTAACTTGATTAGTATGCATCCAATACTATTGGTACCCGTGCTATATTGTCATAGAAGTGAAGAAAAGTCCATAGGTTGTAAGTCTTTTGGCTTAAATACAGACTATTGTGCGATAAAGAGAAGACAGAGAAAGGAATATTGATGAAAAATATAAAGCTCTCAGCACACAGTTCCTGAGGCTAACAAGCAAAATTTATTTGGGAGGAAAATAGAAGAGGGGAATTTAGCAGATTATGGGGTAGAGGTGAAGAGGTGTTTGGCTGGTGTATTTGGTAGGTATTAGATTGGGGTGAGCTATGAGATCCCACATCGATGGGTGAGGAGAACAAAACATTCCTTAAAGGTGTGGAACCTGTCCTTAGTAGACGCGTTTTAAAAACCTTGAGGGAAAGCTCGGAAGATAAAGCCCAAAGAGGAAAATATCTGCTAGTGGTGGGCTTCGGGTCGTTACAATTGTATCAGAGCTAGACACTGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGAGAACAAAGCATTCCTTATAAGGTGTGGAAACCTCTCCCTAGTGGACGTGTTTTAAAAACTTTGAGGGGAAGCTTGGAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGAGCTTCGGGTCGTTACATGGCATTGAAGCCTGTTTGTTGTGTGGAGAAAGGAAGAGACCATGGCTGTGGTTTTTGTTGAACCGGAGGTAGAAAGAGAGTGAGGAGTTCTTTGGATTGTTATCGGAGTGATGACTAATGGAGTAGAGCCAGATTTGATGAAGGGCTGGAAAGAGAGTGAGGAGTTCTTTGTATTGTTACCAGAGTCGTGACTATAATGGAGTAGAGCTTCTCATCGGTAATCGATCACTGTCACGGGAAGAAGTGCTAGAGGAAGGCACCGTGCCGATGGAAGACACTGTTTGAAGCTTCTAGAATACTTGAAGTTCTAATACCATGTACAATTAAGAGAAGAAAAAAATGGTATATTGATGAAAAAGAGAGCTCTCTGCACAGTGTCTGAGACTACATAATGCATTTAAAGCAATGTAGAACAATGTGTAAACTGTTTAGAAGATACAACAAAGTAAAATGAAAAGGGGTAAAAACTATAAGATACACAAATAGCACGATAACATTGGGTATAGTGAAAAATATCAAGATTACAAACAAGCTTAACAACTATTAGAGTTGCTTTAATGTTACACTGATTCATCATTGCATCACTAAATGATTAAGAGACCATGTTTTTTCTTTTATTTACAATTTATTCATCATTTTCATGATTAGATGGATGCATGGCTTGGCAATAGGAGAAGAATATTGGTATTGAACAGAGAAGATATGATATCTTCAGCGGACCGGAATGCTTGGGCAGATTATTTTACGAGACAGGGAATAAAAGTAGTATTTTCAAATGGGAAACTCGGAATGGTATCTAAGCAAAAGATATTCTTTCTGAGCATACTGAGTTTGACAATAGTTGTTAATGTTCTCATGTGGCAACTGTAGGGCGCAATGAAGCTAGGGCGGTTGGCCAAGACATTAGCAGCAGATGTGAATGTCAAACGTAGAGCTAAAGGACTACTTCCTCGCGCGGTTAGTTGCATGAATTCACTAAATTCTAATGCTTAAGCTTGTTTGTAAGGTTTTTATATATCTATAATTCTTTCCATGTCAAACCATCTGCAAATCATAAATGATTTTCGTTCTATATTGACATAAACAGACATACAGAAGCACCAAAAGACATTTAAGCTTAAGCCCAAATCATATTATTAGCTTGAAGAGGATATTTTTCTGTGCTAGAGAAATATGTGAAGATTAGGGGCTATATTGGGTTTATCCTTAAATAGTAAATCAGAATTATTTTCAGAACACGACCTAAACATCCTTAGTGATGTACAGGTTCGTGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCATCACTGATCAACCGCTTGCTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCGGGTGTCACCCGAGAATTGAGGTATGGTACCTTTTTTTTCTCAATAGTTTTGATTAAGATGTACAAGCTGGGAACGAGGGAGGAATCAATTGTAAAGCCATTTGTATAAGCTCTTTGATTAACTGTCTCCTTGTTTCCATTCTCTTGTAAAAGGTGGGTTCGTTTTGGCAAAGATCTTGAGTTGCTTGATTCTCCTGGTATTATACCAATGCGGATTAGCGACCAGACAGCCGCAATAAAGCTTGCTATATGCGATGACATTGGAGAGAAGTCCTACAATGCTGCTGATGTTGCTGCCATACTCGTACAGATTCTGACCAAGCTTCCGTCAGTAGGTACCCATGGAAATATTTTGATCTCTTGAACATTCAAATAGTTCAAGTATCTCTCTTGGTCGTACTGAAATATTCCTGCACTGTTACTTGATAGTCAAATCATTTCTAATCACTGGGTTAATTCTTTGCTTGATGGAACACTGCATCATACGTTTTCTTGCGCTTTTCAGGATGTTCACTTTTACCTGCTAAAATTTCCTATTTGTTGATAATTGACACTAGCTCTTACAAATCTCCAGGTATAGAATTACTTCAAAAGCGATATAAAGTCGATGCAGACGGTCAATGTGGTCACATGTACGTATCGATGCTAATCAATAGCTTTTCATTTCTCGTTTAGTATTATTATTATATGCATGAAACATCCTGATTTCTAGATGAGAAAAACTCTACCTCTCTTTACTCATCCTTGGGTTAGTTCTTTCTTTAACCCTGTGGGATGGAATCTTTGACTCAATACTCTCTATGTATTAAAAAAGACTACATATTTGTAGTCCAAAAATAATTCTTAGTAAATTGTTGGTGACAGATTTGTTCAAAAGTTAGCACTTCAATTGTTCAACGGGGACAGTCATCAAGCTGCTTTCCGCATCTTATCAGATTTTCGCAAAGGAAAGTTTGGTTGGATTGCTTTGGAGAGGCCTCCTAGATAATGCTGTTGGATGATGCTTTGCTTCAAGGTCAGAATTTCAGCTTCTCACTCATACAATTCATATAAATGATTAAAACCACCTGGCGTAGAATTATTAGAAACTTTCAACTGATGGAAAAAGATTCATGATGTCTATATTGCTTTTCGACTTGCGAAGTCGTGGGAAGCACAAAATTGGAGTCCATCATGAATGGCAAGGAGTCTGATTAACTTGTGAAGCAATGTATTATATGTTCTTATATTACTCGTGTAATTAAAACGATCTTTTTGGTTAACTGACATTTGTATCCCTAATGAAATTCATAATACTTTACTTC

mRNA sequence

ATGAGTCTTCATGTTCAGCTATCAGGGCTCTGCCTGCCCACCACTCGTGCAATCCCGACGCGCCATTTTTACTGCCGGAGCGGACCATCCCCGGCATCTCTTACGCCTTCAGCTTCTGCTTCTTTGCCGCACCCCACAATCCAGATTGTTGGTGGTAGAACATCAAATTTCCTTGGAGATTTGAGCACCAAAGGTGCGCCTAACAGCGACGTAGTTGAGAAAGATTGGGTTGATTTTGAAGCTGATTTGTATTACTGGACAAATCCATTGCGTCCCGTTCAGTGGTATCCTGGCCATATAGCAAAAACAGAAAAAGAGCTGAAGGATCAACTTAGGCTGATGGATGTTGTGATAGAGGTTCGAGATGCTAGAATACCCATGTCTACAAGTCACCCACAGATGGATGCATGGCTTGGCAATAGGAGAAGAATATTGGTATTGAACAGAGAAGATATGATATCTTCAGCGGACCGGAATGCTTGGGCAGATTATTTTACGAGACAGGGAATAAAAGTAGTATTTTCAAATGGGAAACTCGGAATGGGCGCAATGAAGCTAGGGCGGTTGGCCAAGACATTAGCAGCAGATGTGAATGTCAAACGTAGAGCTAAAGGACTACTTCCTCGCGCGGTTCGTGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCATCACTGATCAACCGCTTGCTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCGGGTGTCACCCGAGAATTGAGGTGGGTTCGTTTTGGCAAAGATCTTGAGTTGCTTGATTCTCCTGGTATTATACCAATGCGGATTAGCGACCAGACAGCCGCAATAAAGCTTGCTATATGCGATGACATTGGAGAGAAGTCCTACAATGCTGCTGATGTTGCTGCCATACTCGTACAGATTCTGACCAAGCTTCCGTCAGTAGGTATAGAATTACTTCAAAAGCGATATAAAGTCGATGCAGACGGTCAATGTGGTCACATATTTGTTCAAAAGTTAGCACTTCAATTGTTCAACGGGGACAGTCATCAAGCTGCTTTCCGCATCTTATCAGATTTTCGCAAAGGAAAGTTTGGTTGGATTGCTTTGGAGAGGCCTCCTAGATAATGCTGTTGGATGATGCTTTGCTTCAAGGTCAGAATTTCAGCTTCTCACTCATACAATTCATATAAATGATTAAAACCACCTGGCGTAGAATTATTAGAAACTTTCAACTGATGGAAAAAGATTCATGATGTCTATATTGCTTTTCGACTTGCGAAGTCGTGGGAAGCACAAAATTGGAGTCCATCATGAATGGCAAGGAGTCTGATTAACTTGTGAAGCAATGTATTATATGTTCTTATATTACTCGTGTAATTAAAACGATCTTTTTGGTTAACTGACATTTGTATCCCTAATGAAATTCATAATACTTTACTTC

Coding sequence (CDS)

ATGAGTCTTCATGTTCAGCTATCAGGGCTCTGCCTGCCCACCACTCGTGCAATCCCGACGCGCCATTTTTACTGCCGGAGCGGACCATCCCCGGCATCTCTTACGCCTTCAGCTTCTGCTTCTTTGCCGCACCCCACAATCCAGATTGTTGGTGGTAGAACATCAAATTTCCTTGGAGATTTGAGCACCAAAGGTGCGCCTAACAGCGACGTAGTTGAGAAAGATTGGGTTGATTTTGAAGCTGATTTGTATTACTGGACAAATCCATTGCGTCCCGTTCAGTGGTATCCTGGCCATATAGCAAAAACAGAAAAAGAGCTGAAGGATCAACTTAGGCTGATGGATGTTGTGATAGAGGTTCGAGATGCTAGAATACCCATGTCTACAAGTCACCCACAGATGGATGCATGGCTTGGCAATAGGAGAAGAATATTGGTATTGAACAGAGAAGATATGATATCTTCAGCGGACCGGAATGCTTGGGCAGATTATTTTACGAGACAGGGAATAAAAGTAGTATTTTCAAATGGGAAACTCGGAATGGGCGCAATGAAGCTAGGGCGGTTGGCCAAGACATTAGCAGCAGATGTGAATGTCAAACGTAGAGCTAAAGGACTACTTCCTCGCGCGGTTCGTGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCATCACTGATCAACCGCTTGCTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCGGGTGTCACCCGAGAATTGAGGTGGGTTCGTTTTGGCAAAGATCTTGAGTTGCTTGATTCTCCTGGTATTATACCAATGCGGATTAGCGACCAGACAGCCGCAATAAAGCTTGCTATATGCGATGACATTGGAGAGAAGTCCTACAATGCTGCTGATGTTGCTGCCATACTCGTACAGATTCTGACCAAGCTTCCGTCAGTAGGTATAGAATTACTTCAAAAGCGATATAAAGTCGATGCAGACGGTCAATGTGGTCACATATTTGTTCAAAAGTTAGCACTTCAATTGTTCAACGGGGACAGTCATCAAGCTGCTTTCCGCATCTTATCAGATTTTCGCAAAGGAAAGTTTGGTTGGATTGCTTTGGAGAGGCCTCCTAGATAA

Protein sequence

MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGDLSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFGWIALERPPR

Homology

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BLAST of Carg16840 vs. NCBI nr
Match: KAG7011232.1 (DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 748.4 bits (1931), Expect = 2.9e-212
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
           LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV
Sbjct: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           WIALERPPR
Sbjct: 361 WIALERPPR 369

[Close]

BLAST of Carg16840 vs. NCBI nr
Match: XP_023554315.1 (DAR GTPase 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 746.5 bits (1926), Expect = 1.1e-211
Identity = 368/369 (99.73%), Postives = 368/369 (99.73%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
           LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV
Sbjct: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIELLQKRYKVDADGQCGH FVQKLALQLFNGDSHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIELLQKRYKVDADGQCGHTFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           WIALERPPR
Sbjct: 361 WIALERPPR 369

[Close]

BLAST of Carg16840 vs. NCBI nr
Match: XP_022963690.1 (DAR GTPase 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 742.7 bits (1916), Expect = 1.6e-210
Identity = 366/369 (99.19%), Postives = 367/369 (99.46%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPH TIQIVGGRTSNFLGD
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHSTIQIVGGRTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
           L TKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV
Sbjct: 61  LGTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMSTSHPQMDAW+GNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG
Sbjct: 121 RDARIPMSTSHPQMDAWVGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           WIALERPPR
Sbjct: 361 WIALERPPR 369

[Close]

BLAST of Carg16840 vs. NCBI nr
Match: KAG6571470.1 (DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 740.3 bits (1910), Expect = 7.8e-210
Identity = 365/369 (98.92%), Postives = 367/369 (99.46%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLG+
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGN 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
           LSTKGAPNSD+VEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV
Sbjct: 61  LSTKGAPNSDLVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGI  LQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIGSLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           WIALERPPR
Sbjct: 361 WIALERPPR 369

[Close]

BLAST of Carg16840 vs. NCBI nr
Match: XP_022967431.1 (DAR GTPase 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 734.9 bits (1896), Expect = 3.3e-208
Identity = 361/369 (97.83%), Postives = 364/369 (98.64%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHP IQIVGGRTSNFLGD
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPAIQIVGGRTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
           LSTKGAPNSD+VEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV
Sbjct: 61  LSTKGAPNSDLVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMST HPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTR+GIKVVFSNGKLG
Sbjct: 121 RDARIPMSTCHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRRGIKVVFSNGKLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLA+TLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLARTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIE LQKRYKVDADGQCGH FVQKLALQLFNGDSHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIESLQKRYKVDADGQCGHTFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           WIALERPPR
Sbjct: 361 WIALERPPR 369

[Close]

BLAST of Carg16840 vs. ExPASy Swiss-Prot
Match: Q8H1F6 (DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DGP3 PE=2 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.0e-135
Identity = 236/338 (69.82%), Postives = 280/338 (82.84%), Query Frame = 0


Query: 36  PSASASLPHPTIQIVGGRTSNF-----LGDLSTKGAPNSDVVEKDWVDFEADLYYWTNPL 95
           P+A++S P P IQIVGG+  N         +  K   N D  E DW++ E+D+  WT  L
Sbjct: 37  PTANSSRP-PPIQIVGGKDLNLDVTRKDDSIGFKLEANED--EIDWMNLESDIRLWTRAL 96

Query: 96  RPVQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNRE 155
           RPVQWYPGHI KTEKEL++QL+LMDVVIEVRDARIP+ST+HP+MDAWLGNR+RILVLNRE
Sbjct: 97  RPVQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNRE 156

Query: 156 DMISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLLPRA 215
           DMIS+ DRN WA YF +QGIKV+F+NGKLGMGAMKLGRLAK+LA DVN KRR KGLLPR+
Sbjct: 157 DMISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRS 216

Query: 216 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGIIPMRI 275
           VRAGI+GYPNVGKSSLINRLLKR++C AAPRPGVTRE++WV+ GKDL+LLDSPG++PMRI
Sbjct: 217 VRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRI 276

Query: 276 SDQTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKVDADGQCGHIF 335
            DQ AAIKLAICDDIGEK+Y+  DVA ILVQ+L ++P VG + L  RYK+  +G CG  F
Sbjct: 277 DDQAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKIQLEGNCGKKF 336

Query: 336 VQKLALQLFNGDSHQAAFRILSDFRKGKFGWIALERPP 369
           V+ L L LF GDSHQAAFRIL+DFRKGKFG+++LERPP
Sbjct: 337 VKTLGLNLFGGDSHQAAFRILTDFRKGKFGYVSLERPP 371

[Close]

BLAST of Carg16840 vs. ExPASy Swiss-Prot
Match: E0TTS5 (Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) OX=655816 GN=rbgA PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-46
Identity = 101/281 (35.94%), Postives = 164/281 (58.36%), Query Frame = 0


Query: 93  VQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK  +E+ ++L+L+D+V E+ DARIPMS+ +P ++  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 153 ISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
             +A    W ++F  QGI+ +  N   G G  ++   +K +  +   + RAKG+ PRA+R
Sbjct: 63  ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122

Query: 213 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGIIPMRISD 272
           A I+G PNVGKS+LINRL K+ +     RPG+T   +WV+ GK+LELLD+PGI+  +  D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182

Query: 273 QTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKVDA----DGQCGH 332
           +   ++LA+   I +   N  DVA   ++ L +      E L++RY +D       +   
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYP---ERLKERYALDEIPEDIAELFD 242

Query: 333 IFVQKLALQLFNG--DSHQAAFRILSDFRKGKFGWIALERP 368
              +K    +  G  +  +    I+ D R  KFG ++ E+P
Sbjct: 243 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280

[Close]

BLAST of Carg16840 vs. ExPASy Swiss-Prot
Match: Q65JP4 (Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=rbgA PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-46
Identity = 105/281 (37.37%), Postives = 165/281 (58.72%), Query Frame = 0


Query: 93  VQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK  +E+ ++L+L+D+V E+ DARIPMS+ +P ++  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 153 ISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
             S+   AW  +F + GI  +  N   G G  ++   +K L  +   K +AKG+ PRA+R
Sbjct: 63  ADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRAIR 122

Query: 213 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGIIPMRISD 272
           A IVG PNVGKS+LINRL K+ +     RPGVT   +WV+ GK+LELLD+PGI+  +  D
Sbjct: 123 ALIVGIPNVGKSTLINRLAKKNIAKTGDRPGVTTAQQWVKVGKELELLDTPGILWPKFED 182

Query: 273 QTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKV-DADGQCGHIFV 332
           +   ++LA    I +   N  DVA   ++ L +      E L+KRY + +   +   +F 
Sbjct: 183 ELVGLRLAATGAIKDSIINLQDVAVYGLRFLEENYP---ERLKKRYDLEEIPEEIAALFD 242

Query: 333 Q---KLALQLFNGDSH--QAAFRILSDFRKGKFGWIALERP 368
           +   K    +  G+ +  +    I+ D R  KFG ++ E+P
Sbjct: 243 EIGKKRGCLMAGGEINYDKTTEVIIRDIRTEKFGPLSFEKP 280

[Close]

BLAST of Carg16840 vs. ExPASy Swiss-Prot
Match: O31743 (Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168) OX=224308 GN=rbgA PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-46
Identity = 101/281 (35.94%), Postives = 164/281 (58.36%), Query Frame = 0


Query: 93  VQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK  +E+ ++L+L+D+V E+ DARIPMS+ +P ++  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 153 ISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
             +A    W ++F  QGI+ +  N   G G  ++   +K +  +   + RAKG+ PRA+R
Sbjct: 63  ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122

Query: 213 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGIIPMRISD 272
           A I+G PNVGKS+LINRL K+ +     RPG+T   +WV+ GK+LELLD+PGI+  +  D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182

Query: 273 QTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKVDA----DGQCGH 332
           +   ++LA+   I +   N  DVA   ++ L +      E L++RY +D       +   
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYP---ERLKERYGLDEIPEDIAELFD 242

Query: 333 IFVQKLALQLFNG--DSHQAAFRILSDFRKGKFGWIALERP 368
              +K    +  G  +  +    I+ D R  KFG ++ E+P
Sbjct: 243 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280

[Close]

BLAST of Carg16840 vs. ExPASy Swiss-Prot
Match: C5D8U8 (Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.8e-45
Identity = 106/282 (37.59%), Postives = 163/282 (57.80%), Query Frame = 0


Query: 93  VQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK ++E++++L+L+D+V E+ DARIP+S+ +P +   LGN+ RI++LN+ DM
Sbjct: 5   IQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKADM 64

Query: 153 ISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLL-PRAV 212
                   W  YF RQ +  +  + + G G  ++   AK +  D   K  AKG+  PR +
Sbjct: 65  ADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRPM 124

Query: 213 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGIIPMRIS 272
           RA IVG PNVGKS+LINRL  R +     +PGVT+  +W++ GK++ELLD+PGI+  +  
Sbjct: 125 RALIVGIPNVGKSTLINRLAGRNIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 184

Query: 273 DQTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKV-DADGQCGHIF 332
           D+   +KLA    I +   N  DVA   V  L  L     E L++RY + D  G+   +F
Sbjct: 185 DEEVGLKLATTGAIKDTILNLQDVA---VYALNFLKQHYPERLKERYSLDDIPGEIVALF 244

Query: 333 --VQKLALQLFNG---DSHQAAFRILSDFRKGKFGWIALERP 368
             + K    L +G   D  + +  +L D R  K G ++ E P
Sbjct: 245 DAIGKRRGCLVSGGAVDYDKVSEIVLHDIRTEKLGRLSFETP 283

[Close]

BLAST of Carg16840 vs. ExPASy TrEMBL
Match: A0A6J1HIQ5 (DAR GTPase 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463946 PE=4 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 7.6e-211
Identity = 366/369 (99.19%), Postives = 367/369 (99.46%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPH TIQIVGGRTSNFLGD
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHSTIQIVGGRTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
           L TKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV
Sbjct: 61  LGTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMSTSHPQMDAW+GNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG
Sbjct: 121 RDARIPMSTSHPQMDAWVGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           WIALERPPR
Sbjct: 361 WIALERPPR 369

[Close]

BLAST of Carg16840 vs. ExPASy TrEMBL
Match: A0A6J1HS12 (DAR GTPase 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466972 PE=4 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 1.6e-208
Identity = 361/369 (97.83%), Postives = 364/369 (98.64%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHP IQIVGGRTSNFLGD
Sbjct: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPAIQIVGGRTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
           LSTKGAPNSD+VEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV
Sbjct: 61  LSTKGAPNSDLVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMST HPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTR+GIKVVFSNGKLG
Sbjct: 121 RDARIPMSTCHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRRGIKVVFSNGKLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLA+TLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLARTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV
Sbjct: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIE LQKRYKVDADGQCGH FVQKLALQLFNGDSHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIESLQKRYKVDADGQCGHTFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           WIALERPPR
Sbjct: 361 WIALERPPR 369

[Close]

BLAST of Carg16840 vs. ExPASy TrEMBL
Match: A0A5D3CV40 (DAR GTPase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G001140 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.0e-190
Identity = 333/369 (90.24%), Postives = 344/369 (93.22%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLH+  SG  LP TR I     +CRSGPSP SL PSAS S PHPTIQIVGG+TSNFLGD
Sbjct: 1   MSLHIHPSGFFLPNTRTISPHLSFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
            + KGA NSD++E DWVDFEADLYYWTN LRPVQWYPGHIAKTEKELKDQL+LMDVVIEV
Sbjct: 61  STPKGASNSDLLEGDWVDFEADLYYWTNTLRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWA YFTRQGIKVVFSNG+LG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTREL+WVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIE LQKRYKVDA GQCGHIFVQKLALQLFNGD+HQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIESLQKRYKVDAGGQCGHIFVQKLALQLFNGDNHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           W ALERPPR
Sbjct: 361 WTALERPPR 369

[Close]

BLAST of Carg16840 vs. ExPASy TrEMBL
Match: A0A1S3CIW2 (DAR GTPase 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501342 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.0e-190
Identity = 333/369 (90.24%), Postives = 344/369 (93.22%), Query Frame = 0


Query: 1   MSLHVQLSGLCLPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFLGD 60
           MSLH+  SG  LP TR I     +CRSGPSP SL PSAS S PHPTIQIVGG+TSNFLGD
Sbjct: 1   MSLHIHPSGFFLPNTRTISPHLSFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  LSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEV 120
            + KGA NSD++E DWVDFEADLYYWTN LRPVQWYPGHIAKTEKELKDQL+LMDVVIEV
Sbjct: 61  STPKGASNSDLLEGDWVDFEADLYYWTNTLRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGKLG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWA YFTRQGIKVVFSNG+LG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQLG 180

Query: 181 MGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MG MKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILV 300
           RPGVTREL+WVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

Query: 301 QILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIE LQKRYKVDA GQCGHIFVQKLALQLFNGD+HQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIESLQKRYKVDAGGQCGHIFVQKLALQLFNGDNHQAAFRILSDFRKGKFG 360

Query: 361 WIALERPPR 370
           W ALERPPR
Sbjct: 361 WTALERPPR 369

[Close]

BLAST of Carg16840 vs. ExPASy TrEMBL
Match: A0A6J1DPX2 (DAR GTPase 3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022728 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 9.1e-180
Identity = 320/371 (86.25%), Postives = 337/371 (90.84%), Query Frame = 0


Query: 1   MSLHVQLSGLC--LPTTRAIPTRHFYCRSGPSPASLTPSASASLPHPTIQIVGGRTSNFL 60
           +S+ + LSGL   LP TRAIP   F+CR+GP   SL PS S S P PTIQIVGG+TSNF 
Sbjct: 3   VSVQLSLSGLSLHLPPTRAIPPHVFHCRTGP---SLAPSHSPSSPXPTIQIVGGKTSNFF 62

Query: 61  GDLSTKGAPNSDVVEKDWVDFEADLYYWTNPLRPVQWYPGHIAKTEKELKDQLRLMDVVI 120
           GD S++G  NS  VE+DWVDFEADLYYWT  LRPVQWYPGHIAKTEKELKDQL+LMDVVI
Sbjct: 63  GDGSSQGTSNSGQVERDWVDFEADLYYWTKALRPVQWYPGHIAKTEKELKDQLKLMDVVI 122

Query: 121 EVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWADYFTRQGIKVVFSNGK 180
           EVRDARIPMSTSHPQMD WLGNR+RILVLNREDMISSADRNAWA YFT +GIK+VFSNG+
Sbjct: 123 EVRDARIPMSTSHPQMDGWLGNRKRILVLNREDMISSADRNAWATYFTGRGIKLVFSNGQ 182

Query: 181 LGMGAMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPA 240
           LGMG MKLGRLAKTLAADVNVKRRAKGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPA
Sbjct: 183 LGMGTMKLGRLAKTLAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPA 242

Query: 241 APRPGVTRELRWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAI 300
           APRPGVTREL+WVRFG DLELLDSPGIIPMRISDQTAAIKLAICDDIGE+SYN ADVAAI
Sbjct: 243 APRPGVTRELKWVRFGSDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNVADVAAI 302

Query: 301 LVQILTKLPSVGIELLQKRYKVDADGQCGHIFVQKLALQLFNGDSHQAAFRILSDFRKGK 360
           LVQILTKLPSVGIE LQKRY+VDADGQCG IFVQKLALQLFNGDSHQAAFRILSDFRKGK
Sbjct: 303 LVQILTKLPSVGIESLQKRYRVDADGQCGDIFVQKLALQLFNGDSHQAAFRILSDFRKGK 362

Query: 361 FGWIALERPPR 370
           FGWIALERPPR
Sbjct: 363 FGWIALERPPR 370

[Close]

BLAST of Carg16840 vs. TAIR 10
Match: AT4G02790.1 (GTP-binding family protein )

HSP 1 Score: 484.6 bits (1246), Expect = 7.2e-137
Identity = 236/338 (69.82%), Postives = 280/338 (82.84%), Query Frame = 0


Query: 36  PSASASLPHPTIQIVGGRTSNF-----LGDLSTKGAPNSDVVEKDWVDFEADLYYWTNPL 95
           P+A++S P P IQIVGG+  N         +  K   N D  E DW++ E+D+  WT  L
Sbjct: 37  PTANSSRP-PPIQIVGGKDLNLDVTRKDDSIGFKLEANED--EIDWMNLESDIRLWTRAL 96

Query: 96  RPVQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNRE 155
           RPVQWYPGHI KTEKEL++QL+LMDVVIEVRDARIP+ST+HP+MDAWLGNR+RILVLNRE
Sbjct: 97  RPVQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNRE 156

Query: 156 DMISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLLPRA 215
           DMIS+ DRN WA YF +QGIKV+F+NGKLGMGAMKLGRLAK+LA DVN KRR KGLLPR+
Sbjct: 157 DMISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRS 216

Query: 216 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGIIPMRI 275
           VRAGI+GYPNVGKSSLINRLLKR++C AAPRPGVTRE++WV+ GKDL+LLDSPG++PMRI
Sbjct: 217 VRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRI 276

Query: 276 SDQTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKVDADGQCGHIF 335
            DQ AAIKLAICDDIGEK+Y+  DVA ILVQ+L ++P VG + L  RYK+  +G CG  F
Sbjct: 277 DDQAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKIQLEGNCGKKF 336

Query: 336 VQKLALQLFNGDSHQAAFRILSDFRKGKFGWIALERPP 369
           V+ L L LF GDSHQAAFRIL+DFRKGKFG+++LERPP
Sbjct: 337 VKTLGLNLFGGDSHQAAFRILTDFRKGKFGYVSLERPP 371

[Close]

BLAST of Carg16840 vs. TAIR 10
Match: AT2G41670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-23
Identity = 66/226 (29.20%), Postives = 113/226 (50.00%), Query Frame = 0


Query: 93  VQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           + W+PGH+A   + ++++L+L D+VIEVRDARIP+S+++  + + +  +RRI+ LN++D+
Sbjct: 26  INWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMSAKRRIIALNKKDL 85

Query: 153 ISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
            +    N W  +F       +  N       MKL  L +    +V  +     ++     
Sbjct: 86  ANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLKEVIAREPTLLVM----- 145

Query: 213 AGIVGYPNVGKSSLINRL-------------LKRRMCPAAPRPGVTRELRWVRFG--KDL 272
             +VG PNVGKS+LIN +             LKR      P PGVT+++   +      +
Sbjct: 146 --VVGVPNVGKSALINSIHQIAAARFPVQERLKR--ATVGPLPGVTQDIAGFKIAHRPSI 205

Query: 273 ELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILVQIL 304
            +LDSPG++   I D    +KLA+   + +       +A   + IL
Sbjct: 206 YVLDSPGVLVPSIPDIETGLKLALSGSVKDSVVGEERIAQYFLAIL 242

[Close]

BLAST of Carg16840 vs. TAIR 10
Match: AT3G07050.1 (GTP-binding family protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 84/291 (28.87%), Postives = 135/291 (46.39%), Query Frame = 0


Query: 105 KELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWL----GNRRRILVLNREDMISSADRNA 164
           KEL   + L DV++EV DAR P+ T    M+  +     N+  +L+LN+ D++       
Sbjct: 128 KELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEK 187

Query: 165 WADYFTRQGIKVVF------SNGKLGMGAMKLGR------LAKTLAADVNVK----RRAK 224
           W  Y   +   V F          LG  + K  +       +  L AD  +K        
Sbjct: 188 WLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRS 247

Query: 225 GLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPG 284
             L +++  GI+G PNVGKSSLIN L +  +      PG+TR L+ V   K+++LLD PG
Sbjct: 248 HELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPG 307

Query: 285 IIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILVQILTKLPSVGIELLQKRYKVDADG 344
           ++ ++ S   A+I L  C  I +      D  + + +IL   P    ++L   YK+ +  
Sbjct: 308 VVMLKSSGNDASIALRNCKRIEKLD----DPVSPVKEILKLCPK---DMLVTLYKIPS-F 367

Query: 345 QCGHIFVQKLAL---QLFNG---DSHQAAFRILSDFRKGKFGWIALERPPR 370
           +    F+ K+A    +L  G   D   AA  +L D+ +GK  +  +  PP+
Sbjct: 368 EAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYTM--PPK 408

[Close]

BLAST of Carg16840 vs. TAIR 10
Match: AT4G10650.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 9.1e-15
Identity = 61/230 (26.52%), Postives = 111/230 (48.26%), Query Frame = 0


Query: 88  NPLRPVQWYPGHIAKTEKELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWLG-NRRRILV 147
           NP R  +WY  H+A   + + +++ L+D V+E+RDARIP+S+ +  +  +     +RI+V
Sbjct: 23  NPNR--RWYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKRIIV 82

Query: 148 LNREDMISSADRNAWADYFTRQGIKVVFSNGKLGMGAMKLGRLAKTLAADVNVKRRAKGL 207
           LN+ ++    +     DYF  +   + ++        +K  +L   L + V    +A G 
Sbjct: 83  LNKMELADPLELKKCIDYFEERNY-LSYAVNSHNKDCVK--QLLNFLQSQVRELHKA-GH 142

Query: 208 LPRAVRAGIVGYPNVGKSSLINRLL-----------KRRMCPAAPRPGVTRELRWVRFGK 267
                   ++G PNVGKS+L N L            K +    + +PG T+++  ++ G 
Sbjct: 143 SGHTTTMMLLGIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKIGS 202

Query: 268 --DLELLDSPGIIPMRISDQTAAIKLAICDDIGEKSYNAADVAAILVQIL 304
             ++ +LD+PGI P  + D     KLA+   I +       +A + + IL
Sbjct: 203 HPNVYVLDTPGIFPPNLYDAEICAKLALTGAIPDDIVGELKLARLFLTIL 246

[Close]

BLAST of Carg16840 vs. TAIR 10
Match: AT2G27200.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-14
Identity = 55/203 (27.09%), Postives = 94/203 (46.31%), Query Frame = 0


Query: 105 KELKDQLRLMDVVIEVRDARIPMSTSHPQMDAWL----GNRRRILVLNREDMISSADRNA 164
           ++L   L   D+++ V DAR P+    P ++A+      +++ +L++N+ D++ S  R  
Sbjct: 159 RQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREK 218

Query: 165 WADYFTRQGIKVVFSNGKLGMGAMK------------------------------LGRLA 224
           WA+YF+R  I  VF + K     ++                              L RL 
Sbjct: 219 WAEYFSRNNILFVFWSAKAATATLEGKPLKEQWRAPDTTQKTDNPAVKVYGRDDLLDRL- 278

Query: 225 KTLAADVNVKRRAKGLLPRA-------VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPG 267
           K  A ++   R+++G+   +       V  G VGYPNVGKSS IN L+ ++       PG
Sbjct: 279 KLEALEIVKMRKSRGVSATSTESHCEQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPG 338

The following BLAST results are available for this feature:

BLAST of Carg16840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011232.1	2.9e-212	100.00	DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023554315.1	1.1e-211	99.73	DAR GTPase 3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022963690.1	1.6e-210	99.19	DAR GTPase 3, chloroplastic [Cucurbita moschata]	[more]
KAG6571470.1	7.8e-210	98.92	DAR GTPase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022967431.1	3.3e-208	97.83	DAR GTPase 3, chloroplastic [Cucurbita maxima]	[more]

BLAST of Carg16840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1F6	1.0e-135	69.82	DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DGP3 PE=2 SV=1	[more]
E0TTS5	4.4e-46	35.94	Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii (strain ATCC...	[more]
Q65JP4	5.7e-46	37.37	Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain ATCC 14580 / DSM ...	[more]
O31743	5.7e-46	35.94	Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168) OX=224308 GN=rbgA...	[more]
C5D8U8	2.8e-45	37.59	Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA...	[more]

BLAST of Carg16840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIQ5	7.6e-211	99.19	DAR GTPase 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463946 PE=4 S...	[more]
A0A6J1HS12	1.6e-208	97.83	DAR GTPase 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466972 PE=4 SV=...	[more]
A0A5D3CV40	2.0e-190	90.24	DAR GTPase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G001140 ...	[more]
A0A1S3CIW2	2.0e-190	90.24	DAR GTPase 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501342 PE=4 SV=1	[more]
A0A6J1DPX2	9.1e-180	86.25	DAR GTPase 3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Carg16840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02790.1	7.2e-137	69.82	GTP-binding family protein	[more]
AT2G41670.1	1.4e-23	29.20	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G07050.1	1.5e-20	28.87	GTP-binding family protein	[more]
AT4G10650.1	9.1e-15	26.52	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G27200.1	4.5e-14	27.09	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006073	GTP binding domain	PRINTS	PR00326	GTP1OBG	coord: 259..274 score: 27.26 coord: 213..233 score: 49.84
IPR006073	GTP binding domain	PFAM	PF01926	MMR_HSR1	coord: 213..303 e-value: 9.6E-16 score: 57.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 93..266 e-value: 2.0E-42 score: 146.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 99..334
IPR023179	GTP-binding protein, orthogonal bundle domain superfamily	GENE3D	1.10.1580.10		coord: 271..359 e-value: 1.4E-9 score: 40.0
IPR019991	GTP-binding protein, ribosome biogenesis	TIGRFAM	TIGR03596	TIGR03596	coord: 93..365 e-value: 3.5E-81 score: 270.5
None	No IPR available	PANTHER	PTHR45782:SF5	DAR GTPASE 3, CHLOROPLASTIC	coord: 67..369
None	No IPR available	PANTHER	PTHR45782	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1	coord: 67..369
None	No IPR available	CDD	cd01856	YlqF	coord: 95..265 e-value: 7.98349E-80 score: 240.123
IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain	PROSITE	PS51721	G_CP	coord: 104..268 score: 32.12188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16840-RA	Carg16840-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding