Carg16814 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTATCAGATGTCCAGCCTGGTTCGGGTCCTCAGCGCCGTTGGCCCTTCGTGTCGCTGATATTAAAAATCAGAAACTTCTGGACAATCACATAAAATCCACTCCTCTATCCCTTCCCCATCTCTTATTTTTGGATTTTTCTCTTAGTTTTGAGTGAGACTTGATGGATCCCTGTTGTAAGATTCAGCCGATGGGTGAGTCTATGGTGGTTTGACAATCGCTCTAATCGGAGACAGATTTGGTTTTCGGGAATTGTTTTCTGAACTCGGTTTCTCTCGGATATGTCGGAGCTTTGTCTTATGGCTTCCCATGGATACCCTTCGGCTCTTGTGTTACACCACCAGCATAACACCTCCAGGGAAATCAAGGTACCCTACGACAAACTGTTGATTTGCGAAATTTCTATAACTTTTGTGCTACTTTTTTTTTTTTTTTTTTTTTGGATTTTAAGCCGACTTTCAAGCCAACCATGGATTGGTTGTTTATAATTATTCCCATTCTTGGTTTGTTTCTATATTGATTACGCAAGATATTGTACTTCTGTTCTGATCATTATTGGCTTGGAGATTCTTGTATGCGTTGCTCCCTTACATTGGCTAGCCCTTCCTCTTTGTCGTTCCACCTTTTAGCTATCAAGGTCACACCATTAAATCATGTTCTTAAGGCATAAGAATCTTTTGTGAGTGATCCTCGACTCATCGAGTCGGCAGTTTAAACTATTGTAAGTTGTCATGAGGATGAGGATGTATTGTCGTAACTCTCATTTAGTTCATAGCCCTTGATGGTTCATATTCTCATTTATTTTTGTTTTAACTCTCACTTAGTTCATATTCTCATTTTGATACATGAATCGAGCATTAATGTTGCTATGTTTGTATAAAGGATTGTCTAGCATTATTTTAAGACGTGGAGTCATTGCCATTTTGTATTGCCTCGAGACAATTGGGAGAAACTTTGTGTGAGAGTGTGAGAGTGTGAGAGATACACTTGTAAACACTTTGGTTATAGTAATTGACTACTGCCCGTGGATGCAGGGGAATTTCTTCTCTCCAAACCACGTAAATCTTTGTGTCTCCTTGTTTAATATATATTTGTGGGTGTGTGTGAGTGCGATCGATCTTGCTTCCGCTTAGGCTACAACTATCGAGTATCAGAACATTTTGGCTGTGGCATGTAAGGGTGCAACATAAACTTTTTTTTTTACTTTTGTGATTAACCAGGACTGTCAGCCTTTCTTGTCAATACGTGGAGCTAGGCCAGAAATTGTGATCGGGTCAGAATTGCAAAATATTCAGCCTCCACAGAGCCATGGATCATGGAAGTCTATTATCGGGATGCCAGATTCCAATCAATTAGTTGAGTTTGACCCAAAAGTTAGAAGTCTGAACATGATTGACACACAAGGTTAGTCGATTAGCAAGTTTCAACATAGTTTTTAAGGACTCTTATTATCTTTCCTATCATCTATAACAGCAGGAAACAAATCATTGAACTTCATCATGACTGCTTTACTTTTCACTTCTCTGGTGAAATGTGATTTTTTTAAGAAAACACTAGTAGAGCAACGATACTTCATAAAGAAGTGTTATAGTGATTATTAGTATAGTTGTATCGTTGTAAACATCTTAAACATGTTCTCCTTTATTGTCCTTTTACTATCTTTTACAAAAATTACCCTGGTACACTTGTCTAAATATGTGAGATCCCACCTCAGTTGGAGAGGTGAACGAAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAAATGCGTTTTAAAACCTTGAGGGGAAGCCCAAAAGGGAAATCCCAAAGAGACAATATCAGCCAGCGGTGGACTCGACATCAACATCATCATCATCATTATCAACTAAACATTCTTGTCTTCGGTGCATCTTCTAAGATGTAATGGCAAAAGTAATTATAGGCTAAGCTACCATAACCTAAGTTGTATTAGTATTATTGCGCAAAGTGGATTTTTATAATTTGAAGATTAAACTAGACAATAAGGTACATTTATGGGCATCTATACCCGAGTCTTAATTGTTCCCTCTTTGATTTGGTTTCAGATAATCGGGGTGGCTCTTTGATATTCAGTTCTAGATTTGAGGAGGAATTCAAAAGGTGTGAGAAAGTCTTGGAGTCCCTTGTGTCCTGTCCAAGTGAAGAGAAGAAATATGCATTAAATTTACCAGACTTGAAGGGGGTTACAAGAATTAAAGACGCAGCATTGTCGAGGGCCCGTTGCTACTTCACTTATCTTTCCTAGCTGCGAGTTTGATGCACCGGAGCCAATCATGGACTTTGTTGGCGAATTGATTAGAAGCTCAAAGATCACAATTCATCCCGATGGACAAATTCTTTTAACTGAGACTGGGACAAAGATCAAGGATTTACTTTCAGTTGTTGCTGAGTTTTATTTGTCGAAGAACTCTTTAAGTTGGAGCAGGCAGTCAATTCTTGTCCCCAAATATGATAGGTACGTCTTTCTCTGCCTTTTTTATAATCCACAGATTTTTTTTTTTTTCTTGAAATTACATGAATTTAAGCTGAGACTGCAAACATTCTGTGCCCAGGTTGAACGGTGGAGTGGGAAGCCATATTTATGATTCTCCGGTGAAGCTTCATGCAACAACCATTGCTCCTATGAAGAGGTATGTGCCACATGCCTAGTCGTACAAGTTCGATTATTTTCTCGTCATTCGTTTTGGTCGTGGCATTTGCTTTTAGACTTACACAACTCCTGTTATGTACTTGACAGCCCTGATATAATCAAGGTCAAGCCATCGCCAAAAAGGAGACGCAGTAAGAAAGTAGGCCATGAGAGAGATCTGTACAAGAAAAACTATGTCCACGCATGTGAGAGTCTGCTATCCTATGTGTTTAACAAGCAGCAGCACGGGAGAAGGGCAATACAGTCATTAAAGAATTCGGGCCGAGAGGTTCCTCAGTTTCTCACTGAGTTCTCTGTTGGTATTGCTGGGGCTGGTCTTGTTGTCCTTTTCTCTGTCATGTATGAAATTGCTTGCGGGAGTGTGCCATTTTGTTCGTCTAAACTCTTGACCACTGGATTTGGGCTGGGTCTGGTTTGGCTATCTTGTGGCGTGAATAAACTGAGGGATACAATAATGTGTATCAGCAGGAAAGCAGCCAAGGTTAGCTTGAAGGATGATGAGATGATAAGGAGAGTGGATAAGAGCCTAAATGATATCTTCTTCAGAGCGGCGACTTTAATGATGGTAGCCATCTTGAAAATTGGTTAGGCTTAAGTGATCATCCTAGTTGGTATTCATCTGAGTGTAGATATGCGCAAGTAAAGATCGCTTGAACTCAGAAATGACAATTTCGAACCGATATCGGCATCGAGTTCAGTTACTTGGGTCTGTTTGAACGCCCCTCTCGAGAGCGGAGACTCGTTCTCTTGTCGTATCAGCTGTTCATGCAAGGTTTTGGTTGTGGGGGGTTACACTACTATCAAATACTTGAAGCCAGATTGCAGGCGTTGTAGTTATATACAATTTTGTTCTTATAATAAACGTATTTCTATGAAGTTTCTTACCTAAACTATTTTCCTTACATAAATAACTATCCTTTTAAGGGCAGCTTGGTTGGAAGTTTTTGTTGGATGAGCATGAATAATATTATCAAGTATCTTATTCCGAGATATAGATAAATTTTGTCGTTACGTAACTTGGAAGGACCAGTACGTATATCAACAGTGGATAGTCCACCAATAGAGATATA GTTTATCAGATGTCCAGCCTGGTTCGGGTCCTCAGCGCCGTTGGCCCTTCGTGTCGCTGATATTAAAAATCAGAAACTTCTGGACAATCACATAAAATCCACTCCTCTATCCCTTCCCCATCTCTTATTTTTGGATTTTTCTCTTAGTTTTGAGTGAGACTTGATGGATCCCTGTTGTAAGATTCAGCCGATGGGTGAGTCTATGGTGGTTTGACAATCGCTCTAATCGGAGACAGATTTGGTTTTCGGGAATTGTTTTCTGAACTCGGTTTCTCTCGGATATGTCGGAGCTTTGTCTTATGGCTTCCCATGGATACCCTTCGGCTCTTGTGTTACACCACCAGCATAACACCTCCAGGGAAATCAAGGACTGTCAGCCTTTCTTGTCAATACGTGGAGCTAGGCCAGAAATTGTGATCGGGTCAGAATTGCAAAATATTCAGCCTCCACAGAGCCATGGATCATGGAAGTCTATTATCGGGATGCCAGATTCCAATCAATTAGTTGAGTTTGACCCAAAAGTTAGAAGTCTGAACATGATTGACACACAAGATAATCGGGGTGGCTCTTTGATATTCAGTTCTAGATTTGAGGAGGAATTCAAAAGGGGGTTACAAGAATTAAAGACGCAGCATTGTCGAGGGCCCGTTGCTACTTCACTTATCTTTCCTAGCTGCGAGTTTGATGCACCGGAGCCAATCATGGACTTTGTTGGCGAATTGATTAGAAGCTCAAAGATCACAATTCATCCCGATGGACAAATTCTTTTAACTGAGACTGGGACAAAGATCAAGGATTTACTTTCAGTTGTTGCTGAGTTTTATTTGTCGAAGAACTCTTTAAGTTGGAGCAGGCAGTCAATTCTTGTCCCCAAATATGATAGGTTGAACGGTGGAGTGGGAAGCCATATTTATGATTCTCCGGTGAAGCTTCATGCAACAACCATTGCTCCTATGAAGAGCCCTGATATAATCAAGGTCAAGCCATCGCCAAAAAGGAGACGCAGTAAGAAAGTAGGCCATGAGAGAGATCTGTACAAGAAAAACTATGTCCACGCATGTGAGAGTCTGCTATCCTATGTGTTTAACAAGCAGCAGCACGGGAGAAGGGCAATACAGTCATTAAAGAATTCGGGCCGAGAGGTTCCTCAGTTTCTCACTGAGTTCTCTGTTGGTATTGCTGGGGCTGGTCTTGTTGTCCTTTTCTCTGTCATGTATGAAATTGCTTGCGGGAGTGTGCCATTTTGTTCGTCTAAACTCTTGACCACTGGATTTGGGCTGGGTCTGGTTTGGCTATCTTGTGGCGTGAATAAACTGAGGGATACAATAATGTGTATCAGCAGGAAAGCAGCCAAGGTTAGCTTGAAGGATGATGAGATGATAAGGAGAGTGGATAAGAGCCTAAATGATATCTTCTTCAGAGCGGCGACTTTAATGATGGTAGCCATCTTGAAAATTGGTTAGGCTTAAGTGATCATCCTAGTTGGTATTCATCTGAGTGTAGATATGCGCAAGTAAAGATCGCTTGAACTCAGAAATGACAATTTCGAACCGATATCGGCATCGAGTTCAGTTACTTGGGTCTGTTTGAACGCCCCTCTCGAGAGCGGAGACTCGTTCTCTTGTCGTATCAGCTGTTCATGCAAGGTTTTGGTTGTGGGGGGTTACACTACTATCAAATACTTGAAGCCAGATTGCAGGCGTTGTAGTTATATACAATTTTGTTCTTATAATAAACGTATTTCTATGAAGTTTCTTACCTAAACTATTTTCCTTACATAAATAACTATCCTTTTAAGGGCAGCTTGGTTGGAAGTTTTTGTTGGATGAGCATGAATAATATTATCAAGTATCTTATTCCGAGATATAGATAAATTTTGTCGTTACGTAACTTGGAAGGACCAGTACGTATATCAACAGTGGATAGTCCACCAATAGAGATATA ATGTCGGAGCTTTGTCTTATGGCTTCCCATGGATACCCTTCGGCTCTTGTGTTACACCACCAGCATAACACCTCCAGGGAAATCAAGGACTGTCAGCCTTTCTTGTCAATACGTGGAGCTAGGCCAGAAATTGTGATCGGGTCAGAATTGCAAAATATTCAGCCTCCACAGAGCCATGGATCATGGAAGTCTATTATCGGGATGCCAGATTCCAATCAATTAGTTGAGTTTGACCCAAAAGTTAGAAGTCTGAACATGATTGACACACAAGATAATCGGGGTGGCTCTTTGATATTCAGTTCTAGATTTGAGGAGGAATTCAAAAGGGGGTTACAAGAATTAAAGACGCAGCATTGTCGAGGGCCCGTTGCTACTTCACTTATCTTTCCTAGCTGCGAGTTTGATGCACCGGAGCCAATCATGGACTTTGTTGGCGAATTGATTAGAAGCTCAAAGATCACAATTCATCCCGATGGACAAATTCTTTTAACTGAGACTGGGACAAAGATCAAGGATTTACTTTCAGTTGTTGCTGAGTTTTATTTGTCGAAGAACTCTTTAAGTTGGAGCAGGCAGTCAATTCTTGTCCCCAAATATGATAGGTTGAACGGTGGAGTGGGAAGCCATATTTATGATTCTCCGGTGAAGCTTCATGCAACAACCATTGCTCCTATGAAGAGCCCTGATATAATCAAGGTCAAGCCATCGCCAAAAAGGAGACGCAGTAAGAAAGTAGGCCATGAGAGAGATCTGTACAAGAAAAACTATGTCCACGCATGTGAGAGTCTGCTATCCTATGTGTTTAACAAGCAGCAGCACGGGAGAAGGGCAATACAGTCATTAAAGAATTCGGGCCGAGAGGTTCCTCAGTTTCTCACTGAGTTCTCTGTTGGTATTGCTGGGGCTGGTCTTGTTGTCCTTTTCTCTGTCATGTATGAAATTGCTTGCGGGAGTGTGCCATTTTGTTCGTCTAAACTCTTGACCACTGGATTTGGGCTGGGTCTGGTTTGGCTATCTTGTGGCGTGAATAAACTGAGGGATACAATAATGTGTATCAGCAGGAAAGCAGCCAAGGTTAGCTTGAAGGATGATGAGATGATAAGGAGAGTGGATAAGAGCCTAAATGATATCTTCTTCAGAGCGGCGACTTTAATGATGGTAGCCATCTTGAAAATTGGTTAG MSELCLMASHGYPSALVLHHQHNTSREIKDCQPFLSIRGARPEIVIGSELQNIQPPQSHGSWKSIIGMPDSNQLVEFDPKVRSLNMIDTQDNRGGSLIFSSRFEEEFKRGLQELKTQHCRGPVATSLIFPSCEFDAPEPIMDFVGELIRSSKITIHPDGQILLTETGTKIKDLLSVVAEFYLSKNSLSWSRQSILVPKYDRLNGGVGSHIYDSPVKLHATTIAPMKSPDIIKVKPSPKRRRSKKVGHERDLYKKNYVHACESLLSYVFNKQQHGRRAIQSLKNSGREVPQFLTEFSVGIAGAGLVVLFSVMYEIACGSVPFCSSKLLTTGFGLGLVWLSCGVNKLRDTIMCISRKAAKVSLKDDEMIRRVDKSLNDIFFRAATLMMVAILKIG Homology
BLAST of Carg16814 vs. NCBI nr
Match: KAG7011207.1 (hypothetical protein SDJN02_26110 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 786.6 bits (2030), Expect = 1.0e-223 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0
BLAST of Carg16814 vs. NCBI nr
Match: XP_023554065.1 (uncharacterized protein LOC111811444 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 767.7 bits (1981), Expect = 4.9e-218 Identity = 389/419 (92.84%), Postives = 393/419 (93.79%), Query Frame = 0
BLAST of Carg16814 vs. NCBI nr
Match: KAG6571441.1 (hypothetical protein SDJN03_28169, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 763.8 bits (1971), Expect = 7.1e-217 Identity = 389/419 (92.84%), Postives = 392/419 (93.56%), Query Frame = 0
BLAST of Carg16814 vs. NCBI nr
Match: XP_022963835.1 (uncharacterized protein LOC111464023 [Cucurbita moschata]) HSP 1 Score: 755.7 bits (1950), Expect = 1.9e-214 Identity = 385/419 (91.89%), Postives = 390/419 (93.08%), Query Frame = 0
BLAST of Carg16814 vs. NCBI nr
Match: XP_022967418.1 (uncharacterized protein LOC111466962 [Cucurbita maxima]) HSP 1 Score: 755.4 bits (1949), Expect = 2.5e-214 Identity = 383/419 (91.41%), Postives = 389/419 (92.84%), Query Frame = 0
BLAST of Carg16814 vs. ExPASy TrEMBL
Match: A0A6J1HJ46 (uncharacterized protein LOC111464023 OS=Cucurbita moschata OX=3662 GN=LOC111464023 PE=4 SV=1) HSP 1 Score: 755.7 bits (1950), Expect = 9.3e-215 Identity = 385/419 (91.89%), Postives = 390/419 (93.08%), Query Frame = 0
BLAST of Carg16814 vs. ExPASy TrEMBL
Match: A0A6J1HV14 (uncharacterized protein LOC111466962 OS=Cucurbita maxima OX=3661 GN=LOC111466962 PE=4 SV=1) HSP 1 Score: 755.4 bits (1949), Expect = 1.2e-214 Identity = 383/419 (91.41%), Postives = 389/419 (92.84%), Query Frame = 0
BLAST of Carg16814 vs. ExPASy TrEMBL
Match: A0A5A7URL6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00670 PE=4 SV=1) HSP 1 Score: 609.8 bits (1571), Expect = 8.2e-171 Identity = 311/419 (74.22%), Postives = 343/419 (81.86%), Query Frame = 0
BLAST of Carg16814 vs. ExPASy TrEMBL
Match: A0A1S3BM37 (uncharacterized protein LOC103491343 OS=Cucumis melo OX=3656 GN=LOC103491343 PE=4 SV=1) HSP 1 Score: 609.8 bits (1571), Expect = 8.2e-171 Identity = 311/419 (74.22%), Postives = 343/419 (81.86%), Query Frame = 0
BLAST of Carg16814 vs. ExPASy TrEMBL
Match: A0A0A0KEA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409350 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 9.4e-167 Identity = 307/419 (73.27%), Postives = 337/419 (80.43%), Query Frame = 0
BLAST of Carg16814 vs. TAIR 10
Match: AT4G02920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 204.1 bits (518), Expect = 2.0e-52 Identity = 142/431 (32.95%), Postives = 228/431 (52.90%), Query Frame = 0
BLAST of Carg16814 vs. TAIR 10
Match: AT4G02920.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 201.8 bits (512), Expect = 1.0e-51 Identity = 141/432 (32.64%), Postives = 228/432 (52.78%), Query Frame = 0
BLAST of Carg16814 vs. TAIR 10
Match: AT1G03340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02920.1); Has 44 Blast hits to 41 proteins in 13 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 171.4 bits (433), Expect = 1.4e-42 Identity = 119/401 (29.68%), Postives = 200/401 (49.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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