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Carg16793 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGACACGTGTCGGTTTGAAGTCCTTGTTTTGTTTTTGACTTTTGTAATCCGTCGTCCCACTTTCTTGGGAACTTCTAGGCAGGATCCGACACGTCGTCATGGCCAAGCTGGAAAGTTCTGTCACGCAATTTGCTTGGAAGAGTCCAATAAATTGTTCTTTTTTTGGGTTTATGTGGTTACCGCTGGGCCGCCAGATGGGTCTTGCCCACGTGAACAGATGGGTCTTGCCTACGCGTAACTTCTTAATATCACAAACGTGGGGAGATATTTTGAGGAAATCAAAAGTAAAATTATAAGAATTTATGTTGAAAGTGGATAATATCATATCATTGTAGAGGCCTATGATTCTTAACAATCGTGATAAACTAATTCTCATGGTAGAAGACAACAAACTAGCTGCAAGATACATTGGTCCAGATTCATGATTACTTTATCTCATGCAAATCGTTTGCTTGTAACTATTCAATATCCTTACAAAAAATTAATCGCATCGGAGCGTTTCCGCAGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATATGTTCGTGTAAGTCCTATAGATCTCCCCGTTGTTAATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAACTATAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACGAATTGTTTATCAATGACTGGAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTGGGGTCGTGAGTTGCTTCACTCAATAGATTTAATTAATGATTAA ATGACTGACACGTGTCGGTTTGAAGTCCTTGTTTTGTTTTTGACTTTTGTAATCCGTCGTCCCACTTTCTTGGGAACTTCTAGGCAGGATCCGACACGTCGTCATGGCCAAGCTGGAAAGTTCTGTCACGCAATTTGCTTGGAAGAGTCCAATAAATTTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATATGTTCGTGTAAGTCCTATAGATCTCCCCGTTGTTAATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAACTATAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACGAATTGTTTATCAATGACTGGAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTGGGGTCGTGAGTTGCTTCACTCAATAGATTTAATTAATGATTAA ATGACTGACACGTGTCGGTTTGAAGTCCTTGTTTTGTTTTTGACTTTTGTAATCCGTCGTCCCACTTTCTTGGGAACTTCTAGGCAGGATCCGACACGTCGTCATGGCCAAGCTGGAAAGTTCTGTCACGCAATTTGCTTGGAAGAGTCCAATAAATTTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATATGTTCGTGTAAGTCCTATAGATCTCCCCGTTGTTAATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAACTATAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACGAATTGTTTATCAATGACTGGAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTGGGGTCGTGAGTTGCTTCACTCAATAGATTTAATTAATGATTAA MTDTCRFEVLVLFLTFVIRRPTFLGTSRQDPTRRHGQAGKFCHAICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSIDLIND Homology
BLAST of Carg16793 vs. NCBI nr
Match: KAG7014879.1 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 331.6 bits (849), Expect = 3.5e-87 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Carg16793 vs. NCBI nr
Match: YP_009764792.1 (NdhI [Acrocarpus fraxinifolius] >QIS95069.1 NdhI [Acrocarpus fraxinifolius]) HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43 Identity = 87/96 (90.62%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Carg16793 vs. NCBI nr
Match: YP_009418066.1 (NADH-plastoquinone oxidoreductase subunit I [Stewartia pteropetiolata] >YP_009418588.1 NADH-plastoquinone oxidoreductase subunit I [Stewartia calcicola] >YP_009576481.1 NADH dehydrogenase subunit I [Stewartia micrantha] >YP_009579335.1 NADH dehydrogenase subunit I [Hartia laotica] >ASM43659.1 NADH-plastoquinone oxidoreductase subunit I [Stewartia pteropetiolata] >ASM44616.1 NADH-plastoquinone oxidoreductase subunit I [Stewartia calcicola] >QBK39210.1 NADH dehydrogenase subunit I [Stewartia pteropetiolata] >QBK39554.1 NADH dehydrogenase subunit I [Hartia laotica] >QBK39640.1 NADH dehydrogenase subunit I [Stewartia micrantha]) HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43 Identity = 86/101 (85.15%), Postives = 91/101 (90.10%), Query Frame = 0
BLAST of Carg16793 vs. NCBI nr
Match: YP_009419545.1 (NADH-plastoquinone oxidoreductase subunit I [Sladenia celastrifolia] >ASM46182.1 NADH-plastoquinone oxidoreductase subunit I [Sladenia celastrifolia]) HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43 Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Carg16793 vs. NCBI nr
Match: YP_009300288.1 (NADH dehydrogenase subunit I [Ilex paraguariensis] >YP_009684970.1 NADH dehydrogenase subunit I [Ilex cornuta] >YP_009685056.1 NADH dehydrogenase subunit I [Ilex integra] >YP_009763434.1 NADH-plastoquinone oxidoreductase subunit I [Ilex latifolia] >YP_010122331.1 NADH dehydrogenase subunit I [Ilex dabieshanensis] >YP_010138925.1 NADH dehydrogenase subunit I [Ilex vomitoria] >YP_010139015.1 NADH dehydrogenase subunit I [Ilex intermedia] >YP_010142944.1 NADH dehydrogenase subunit I [Ilex x koehneana] >YP_010151555.1 NdhI [Ilex ficoidea] >YP_010151816.1 NdhI [Ilex cinerea] >YP_010151990.1 NdhI [Ilex graciliflora] >YP_010155562.1 NADH-plastoquinone oxidoreductase subunit I [Ilex x attenuata] >YP_010155650.1 NADH-plastoquinone oxidoreductase subunit I [Ilex x altaclerensis] >AJW59575.1 NADH dehydrogenase subunit I [Ilex dumosa] >ANS81165.1 NADH-plastoquinone oxidoreductase subunit I [Ilex sp. XY-2016] >ANS81260.1 NADH-plastoquinone oxidoreductase subunit I [Ilex delavayi] >QZP42723.1 NADH-plastoquinone oxidoreductase subunit I [Ilex pernyi] >ADD31286.1 NADH-plastoquinone oxidoreductase subunit I protein [Ilex cornuta]) HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43 Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy Swiss-Prot
Match: Q8HVU7 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Chamaechaenactis scaposa OX=176524 GN=ndhI PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46 Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy Swiss-Prot
Match: Q2QD37 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhI PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 5.3e-46 Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy Swiss-Prot
Match: Q8HVV8 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Ambrosia trifida OX=4214 GN=ndhI PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 6.9e-46 Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy Swiss-Prot
Match: Q8HVW3 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Acanthospermum australe OX=185140 GN=ndhI PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 9.0e-46 Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy Swiss-Prot
Match: Q8HVW2 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Acmella radicans OX=217838 GN=ndhI PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 9.0e-46 Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy TrEMBL
Match: A0A649UJS8 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Ilex asprella OX=185493 GN=ndhI PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 8.8e-44 Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy TrEMBL
Match: A0A221HQM5 (NADH dehydrogenase subunit I OS=Stewartia pteropetiolata OX=182309 GN=ndhI PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 8.8e-44 Identity = 86/101 (85.15%), Postives = 91/101 (90.10%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy TrEMBL
Match: A0A1B1NH80 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Ilex latifolia OX=53205 GN=ndhI PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 8.8e-44 Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy TrEMBL
Match: A0A6B9VGR5 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Ilex viridis OX=185560 GN=ndhI PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 8.8e-44 Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Carg16793 vs. ExPASy TrEMBL
Match: A0A1B1NHR3 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Ilex pubescens OX=185543 GN=ndhI PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 8.8e-44 Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Carg16793 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases ) HSP 1 Score: 181.0 bits (458), Expect = 7.1e-46 Identity = 83/96 (86.46%), Postives = 87/96 (90.62%), Query Frame = 0
BLAST of Carg16793 vs. TAIR 10
Match: AT1G16700.1 (Alpha-helical ferredoxin ) HSP 1 Score: 51.6 bits (122), Expect = 6.5e-07 Identity = 27/96 (28.12%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of Carg16793 vs. TAIR 10
Match: AT1G79010.1 (Alpha-helical ferredoxin ) HSP 1 Score: 51.6 bits (122), Expect = 6.5e-07 Identity = 27/96 (28.12%), Postives = 45/96 (46.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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