Carg16776 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16776
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr16: 1159199 .. 1163754 (+)
RNA-Seq ExpressionCarg16776
SyntenyCarg16776
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCTTGGAGGAGACCGAGATCAAATTAGCATTACTCCGAAATTGTATGGCTAATGAGCTAAGAGAGGGATGTTATTCTGACAGACGGCTTTATTTCTGGATTTTTCAGACAAATCTTGCTCAATCTATGCACATTTTTCATGCAGTCTCTTTTGTTATTATTATTATTTTGTTTGAATTCTATGCTTTTTAAGAAATAAATTACAGCGTACTTTGTTTTCCTCAGTCATCCAGTCAATACTTTCAGAAATTCATTTTCAGATGTAAACTGACTGCTATTCATCTTTATATATGACAATTGAAACGGTTCTTATAGATCAGTTATCTGACACTTACCATTAGACTGACTGACGGAAGAATTGGTATTTAATTTGCTTAGCTGCCGTACTTTTGTTGCGGGACTGAGATGTATGTGTTACAGTGATTTAGATATTTGTTACAATATTTCTAGAAGTACAAGAAGCTATTAGTCGCTTTAATCAGCTTCAATATGTCTATGCATATGTCAATGCAATATACATCATATTAATGAGTGCTACAAAACTAAAATTGTAGTGCTTGATGTTCCATTTGGATTGTAACTTCTGGCCATGTTCTGTCATTTACATCTTCATCTTTTTTGTTTGCAGCATAAATATGCAATCTATTTTCTTGCCAAAAACATTCATCGTATACTCATTTGGTGGAGTATATTCTGGCACTTTGTTGCATCGAAGTTCTAGTAAATGTGATGGAAGGTATATGTTTGGCGATGCCGTATTAAAGTTGTTTAGGAAGAATGGCCTAAAAAAGGTCAGTAAAGCAGCATTATATGATAATTATACTATTAGCGCTAGGTGGCATGGATGTAAAGATCAAGAGGAACTATCTGGTGATTTGTGCAACTGTTTGATTCGTGACTATTGTAAGGTAGGGAATGTTGATGCTGCTATGTCTCTTCTTTCTCATATGGAGGCTGTAGGTCTCCATGCCTCTGTAGCATCTTACACATATTTGATTGAAGCTCATGGAAATGTAGGCAGGACTTTGGAAGCTGATATCTTATTTCAAGAAATGATTAGTTTTGGTCGTACGCCAAGAACAACGGTCTGCAATGCACTACTAAGAGGGTTCTTGAGAAAAGGCCTTTTAGATCTTGCATCTGATGCTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACGTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGCTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGGTTATTGTAATATATCAGAACAATGGCATGTGGAAGAAAGCAGTGGGGATCGTTGATGAGATAAGAAAATCAGGGATTTATGTGGACAAACACATTTACAACAGTATCATAGATACATTTGGGAAATATGGTCAATTACCCGAGGCCTTAGAAGTGTTCAAAAAAATGCAGCAGGATGGTGTAATGCCTGATATAACAACCTGGAATTCGCTGATACAACGGAACTGTAAATCTGGGAACCTTGCTACTGCCCTGGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATTTTCATTACTCTAATTAGCTCGTTGGGTGAGCAGGGAAAGTGGGATATTATAAAGAAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATTTTAGTTGATATTTATGGGCAGTATGGTCAATTTCGGGATGCTGAGAAATGTATATCTGCTCTCAAGTCTGCAGGTCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTGCTCGACAGGTTTGATGCCCATCCTTACTAATTTTTCTTTTTGTGTTATGTAAGTTCTCTTGCTGCAAAAGTAAACTGAATTTTTATGTCCTTGGTTTGTTGTTAGTTCGTTGTTCTCTCTGCACAGAGATGGTGGATGTTTTCTATGAACAAAGAAATATTGTTGGTCGTGATTACTAAGTTATTGTGAGACAATTTTCTTGTATGTTGGTCATTCAATGTAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTAATGGAGGCAGAAGGAATCGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCGTTTGCTGTTGCTGGCAGACATTTGGAGGCGATGGCCATTTATCATCATATAGTTGAAGTTGTAAGTCTTCATGTTCGGTAATGCAAAGCCAGACCAGAAACATGGTTAAAGTCGCATGCAATCAAATTTCTTCCTTTTTTGTATTATCAAGATAATCCTATTATTCATCCTTATTACTTTGTCATATTTTTCTGAGAAGGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCGTATATTCGTGCAAAGAAGTTTCATAAGGTGCTTTCTTATCCTCTGGCCACATTAATTTTTGTTCCGATGAGTTTTCTAAATTTTTTAGATGAAGTTCTTCATTTATTGTCTATGTTTTGGCTGCATGAGATCGTTCAGTATGAAATTTTTTTGATACCTTCTAAGTCCTAACCATATCTGGCTAGGTCCCTGAAATATATAAAGAAATGGAACGTGCTGGTTGCACGCCAGATAGGAAGGCCAGAGAGATGTTGAAGTCCGTAACAGTGGTTCTTGAACAGAGGCATTGTAAGTTCACCCTTTTTGTACTTGTATTTCATAGTTCCTAAGCCAGAGCAGTCCTTGCATGATTGTGGTATAGTTCTTCACCACTTTGCCTCTAGGCGATGGTAAATTTAGCAAGTCCAGTCATAATTTGAAAATTTTATATGTGACGCATTATGCGTCTGACAGAAGGACTCCTCTTGAAAAATATTGCATTATATCTTAATTGGTATGGGGAGGGATGGTGTAATCAAAATGGTAAATGATCTTAGGGACAAGACCGATGGTCTGATGAATTAAGTTTCATGCATCTGAGAAAACGACCAAAAGTGGAAGTAAATCTTGTACATGTATTGATGCCTTTGTTTTGCATATGATAGAAACTATATTCTACTACATAGATCATTTAGTAACAACCAATTGAAAACCCTAGGAGTTTATATTGCATCTCCTCTACCAGCCTTTTGATCAATTACTCGTTGATTAAAAAGAAACTATTTTCTTATATCTAAGGCCACATTTCATTGTTTTTTTCCTAGGAAAAAATATATATGAAAAGACAGCAATTGAATGTTTGGATCTTGTTCATTGAAAAACAGTCGTAAAAAATTGATTTTATGTTTCTTTAGCAGCCATCTAAAATCTTGATCGAGGAATTGATCTACACCAAGAAAGTAGATCATAATGCCAGGTACAAACTGACCCTATTGCCTTAGAGTTGCTGTGAACATCTGGACATTCTCGTCAAGGAGGATCTATTATATGTCTAACAGTTTATAACGACATCAATGACAGGCCAACCTTCAAATGGACCCTGGGGAACTAGGGGCAGAAACAGTTTCTGGCAATAACCTTGGAGATGCAACGACGTCTATCTTGTAAGTTGTAACCATTATGATAATCATAGCACAAATTCTTTTATTATTCTATATGTTATTTGGGGATGAGAATCTTATCCTTAAAACCGGGGCGAAAATTGGATGCTGCTGATAACAATTGAGTAGTAGTTTGTTTATTCCTTAGTTTTTTGTATGAAGTGAAAGTTATAATGCTTCCTTTTATCCCTGTATTTTTTTAACGGAAAAAAATAATAATAGAACAAGGCCCCTCTGCAAAGAAGAAAAATAGGCAAAATGAAGGAAGAATAAACAAAGTTTTATTTTTTTTTAGCTAAACATATCCGAACTTGTATGAAATTCAATTGCTTAGAAATCCCATCTAAGATCGGGGTACTTCTTTAGGAAGTGGATTATGTAACATTAATTGGTTAATGTTAGCATGTTTGTATAATGTACTATGATTGGTTACTTCGAAATATACCTCGTATGATGTCATTGAAAGCCTTCGCACTGTAGCAGAAGTATTAAAGCAGGCGCCGTCGGTAAAAACAGGGAACGAAAACTTTATAATTATATATATTGAAAAAACTTTATGATCAAGTTTACATCAATTGAATTAGTATCAGTCAGGTAAGCCGTTGAGATCTGATGTTGAAGTGGAGAGCAATTAATGTGCCACCAACAATCAACAATCTGTATAGTCCACATGCTTTATTGGGCGGCTGGTTGCATAATATGAAAGGTACCAAAGTTGATTATTATCTCGATAAGAATCTATCAGTTTTCATTCGTGTGCCATTTCATTACATGACCAATGCATGATATTGATGCATGTTATTTGACTTTTGCATTTCTTTGCTATGTCAAACCGAAAACCTTACCTTTTTTTTTTCAAATAATGAACCAAAATAACAACAATAAATAAAATAAAATAAAACCTTTTGCCTCGGATATTTAATTGAGGATAGTTATTATTATTATTATTATTGTTATTATTTTCACAGACCGGCAGAATTTCAACTTGACAATCCAAAGATTTAG

mRNA sequence

ATGGTGCTTGGAGGAGACCGAGATCAAATTAGCATTACTCCGAAATTCATAAATATGCAATCTATTTTCTTGCCAAAAACATTCATCGTATACTCATTTGGTGGAGTATATTCTGGCACTTTGTTGCATCGAAGTTCTAGTAAATGTGATGGAAGGTATATGTTTGGCGATGCCGTATTAAAGTTGTTTAGGAAGAATGGCCTAAAAAAGGTCAGTAAAGCAGCATTATATGATAATTATACTATTAGCGCTAGGTGGCATGGATGTAAAGATCAAGAGGAACTATCTGGTGATTTGTGCAACTGTTTGATTCGTGACTATTGTAAGGTAGGGAATGTTGATGCTGCTATGTCTCTTCTTTCTCATATGGAGGCTGTAGGTCTCCATGCCTCTGTAGCATCTTACACATATTTGATTGAAGCTCATGGAAATGTAGGCAGGACTTTGGAAGCTGATATCTTATTTCAAGAAATGATTAGTTTTGGTCGTACGCCAAGAACAACGGTCTGCAATGCACTACTAAGAGGGTTCTTGAGAAAAGGCCTTTTAGATCTTGCATCTGATGCTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACGTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGCTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGAACAATGGCATGTGGAAGAAAGCAGTGGGGATCGTTGATGAGATAAGAAAATCAGGGATTTATGTGGACAAACACATTTACAACAGTATCATAGATACATTTGGGAAATATGGTCAATTACCCGAGGCCTTAGAAGTGTTCAAAAAAATGCAGCAGGATGGTGTAATGCCTGATATAACAACCTGGAATTCGCTGATACAACGGAACTGTAAATCTGGGAACCTTGCTACTGCCCTGGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATTTTCATTACTCTAATTAGCTCGTTGGGTGAGCAGGGAAAGTGGGATATTATAAAGAAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATTTTAGTTGATATTTATGGGCAGTATGGTCAATTTCGGGATGCTGAGAAATGTATATCTGCTCTCAAGTCTGCAGGTCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTGCTCGACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTAATGGAGGCAGAAGGAATCGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCGTTTGCTGTTGCTGGCAGACATTTGGAGGCGATGGCCATTTATCATCATATAGTTGAAGTTGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCGTATATTCGTGCAAAGAAGTTTCATAAGGTCCCTGAAATATATAAAGAAATGGAACGTGCTGGTTGCACGCCAGATAGGAAGGCCAGAGAGATGTTGAAGTCCGTAACAGTGCCATCTAAAATCTTGATCGAGGAATTGATCTACACCAAGAAAGTAGATCATAATGCCAGACCGGCAGAATTTCAACTTGACAATCCAAAGATTTAG

Coding sequence (CDS)

ATGGTGCTTGGAGGAGACCGAGATCAAATTAGCATTACTCCGAAATTCATAAATATGCAATCTATTTTCTTGCCAAAAACATTCATCGTATACTCATTTGGTGGAGTATATTCTGGCACTTTGTTGCATCGAAGTTCTAGTAAATGTGATGGAAGGTATATGTTTGGCGATGCCGTATTAAAGTTGTTTAGGAAGAATGGCCTAAAAAAGGTCAGTAAAGCAGCATTATATGATAATTATACTATTAGCGCTAGGTGGCATGGATGTAAAGATCAAGAGGAACTATCTGGTGATTTGTGCAACTGTTTGATTCGTGACTATTGTAAGGTAGGGAATGTTGATGCTGCTATGTCTCTTCTTTCTCATATGGAGGCTGTAGGTCTCCATGCCTCTGTAGCATCTTACACATATTTGATTGAAGCTCATGGAAATGTAGGCAGGACTTTGGAAGCTGATATCTTATTTCAAGAAATGATTAGTTTTGGTCGTACGCCAAGAACAACGGTCTGCAATGCACTACTAAGAGGGTTCTTGAGAAAAGGCCTTTTAGATCTTGCATCTGATGCTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACGTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGCTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGAACAATGGCATGTGGAAGAAAGCAGTGGGGATCGTTGATGAGATAAGAAAATCAGGGATTTATGTGGACAAACACATTTACAACAGTATCATAGATACATTTGGGAAATATGGTCAATTACCCGAGGCCTTAGAAGTGTTCAAAAAAATGCAGCAGGATGGTGTAATGCCTGATATAACAACCTGGAATTCGCTGATACAACGGAACTGTAAATCTGGGAACCTTGCTACTGCCCTGGAGTTATTCACTGACATGCAAGAACAGGGGATGCATCCAGATCCTAAGATTTTCATTACTCTAATTAGCTCGTTGGGTGAGCAGGGAAAGTGGGATATTATAAAGAAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATTTTAGTTGATATTTATGGGCAGTATGGTCAATTTCGGGATGCTGAGAAATGTATATCTGCTCTCAAGTCTGCAGGTCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTGCTCGACAGGGGTTGTGTGAAGAGACAGTAAAAGTGCTTCAGCTAATGGAGGCAGAAGGAATCGAACCAAATCTTGTAATGCTGAATGTACTGATCAATGCGTTTGCTGTTGCTGGCAGACATTTGGAGGCGATGGCCATTTATCATCATATAGTTGAAGTTGGTATCAGTCCTGATGTTATAACCTACACCACCCTTATGAAGGCGTATATTCGTGCAAAGAAGTTTCATAAGGTCCCTGAAATATATAAAGAAATGGAACGTGCTGGTTGCACGCCAGATAGGAAGGCCAGAGAGATGTTGAAGTCCGTAACAGTGCCATCTAAAATCTTGATCGAGGAATTGATCTACACCAAGAAAGTAGATCATAATGCCAGACCGGCAGAATTTCAACTTGACAATCCAAAGATTTAG

Protein sequence

MVLGGDRDQISITPKFINMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKNNGMWKKAVGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMERAGCTPDRKAREMLKSVTVPSKILIEELIYTKKVDHNARPAEFQLDNPKI
Homology
[Close]
BLAST of Carg16776 vs. NCBI nr
Match: KAG7014862.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0 

Query: 1   MVLGGDRDQISITPKFINMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVL 60
           MVLGGDRDQISITPKFINMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVL
Sbjct: 1   MVLGGDRDQISITPKFINMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVL 60

Query: 61  KLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLL 120
           KLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLL
Sbjct: 61  KLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLL 120

Query: 121 SHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRK 180
           SHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRK
Sbjct: 121 SHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRK 180

Query: 181 GLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVY 240
           GLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVY
Sbjct: 181 GLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVY 240

Query: 241 SKNNGMWKKAVGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPD 300
           SKNNGMWKKAVGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPD
Sbjct: 241 SKNNGMWKKAVGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPD 300

Query: 301 ITTWNSLIQRNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLD 360
           ITTWNSLIQRNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLD
Sbjct: 301 ITTWNSLIQRNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLD 360

Query: 361 SMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQG 420
           SMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQG
Sbjct: 361 SMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQG 420

Query: 421 LCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYT 480
           LCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYT
Sbjct: 421 LCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYT 480

Query: 481 TLMKAYIRAKKFHKVPEIYKEMERAGCTPDRKAREMLKSVTVPSKILIEELIYTKKVDHN 540
           TLMKAYIRAKKFHKVPEIYKEMERAGCTPDRKAREMLKSVTVPSKILIEELIYTKKVDHN
Sbjct: 481 TLMKAYIRAKKFHKVPEIYKEMERAGCTPDRKAREMLKSVTVPSKILIEELIYTKKVDHN 540

Query: 541 ARPAEFQLDNPKI 554
           ARPAEFQLDNPKI
Sbjct: 541 ARPAEFQLDNPKI 553

[Close]
BLAST of Carg16776 vs. NCBI nr
Match: KAG6576841.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1005.7 bits (2599), Expect = 1.5e-289
Identity = 503/512 (98.24%), Postives = 504/512 (98.44%), Query Frame = 0 

Query: 17  INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAAL 76
           INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAAL
Sbjct: 110 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAAL 169

Query: 77  YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 136
           YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT
Sbjct: 170 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 229

Query: 137 YLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDL 196
           YLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDL
Sbjct: 230 YLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDL 289

Query: 197 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKA 256
           DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKA
Sbjct: 290 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 349

Query: 257 VGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQR 316
           VGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQR
Sbjct: 350 VGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQR 409

Query: 317 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNS 376
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNS
Sbjct: 410 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNS 469

Query: 377 GLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQ 436
           GLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQ
Sbjct: 470 GLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQ 529

Query: 437 LMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAK 496
           LMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAK
Sbjct: 530 LMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAK 589

Query: 497 KFHKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           KFHKVPEIYKEMERAGCTPDRKAREMLKS  +
Sbjct: 590 KFHKVPEIYKEMERAGCTPDRKAREMLKSANL 621

[Close]
BLAST of Carg16776 vs. NCBI nr
Match: XP_022922450.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922451.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922452.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922453.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922454.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922455.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922456.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922457.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922459.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 996.1 bits (2574), Expect = 1.2e-286
Identity = 500/510 (98.04%), Postives = 500/510 (98.04%), Query Frame = 0 

Query: 19  MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 78
           MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60

Query: 79  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 138
           NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL
Sbjct: 61  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 139 IEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDI 198
           IEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 199 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVG 258
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 259 IVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNC 318
           IVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ NC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 319 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 378
           KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 379 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 438
           VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 439 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 498
           EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 499 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           HKVPEIYKEMERAGCTPDRKAREMLKSVTV
Sbjct: 481 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 510

[Close]
BLAST of Carg16776 vs. NCBI nr
Match: XP_022922460.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 996.1 bits (2574), Expect = 1.2e-286
Identity = 500/510 (98.04%), Postives = 500/510 (98.04%), Query Frame = 0 

Query: 19  MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 78
           MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60

Query: 79  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 138
           NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL
Sbjct: 61  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 139 IEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDI 198
           IEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 199 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVG 258
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 259 IVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNC 318
           IVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ NC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 319 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 378
           KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 379 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 438
           VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 439 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 498
           EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 499 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           HKVPEIYKEMERAGCTPDRKAREMLKSVTV
Sbjct: 481 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 510

[Close]
BLAST of Carg16776 vs. NCBI nr
Match: XP_023551942.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 991.5 bits (2562), Expect = 2.9e-285
Identity = 495/512 (96.68%), Postives = 500/512 (97.66%), Query Frame = 0 

Query: 17  INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAAL 76
           INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDA+LKLFRKNGLKKVSKAAL
Sbjct: 24  INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 83

Query: 77  YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 136
           YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT
Sbjct: 84  YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 143

Query: 137 YLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDL 196
           YLIEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDL
Sbjct: 144 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 203

Query: 197 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKA 256
           DIQKNQETYEILLDYHANAGRLEDTW IINEMKRKGFELNSFVYSK      NNGMWKKA
Sbjct: 204 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 263

Query: 257 VGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQR 316
           VGIVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ 
Sbjct: 264 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 323

Query: 317 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNS 376
           NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWD+IKKNLDSMKLRGHKNS
Sbjct: 324 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 383

Query: 377 GLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQ 436
           GLVYEILVDIYGQYGQF+DAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVL+
Sbjct: 384 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 443

Query: 437 LMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAK 496
           LMEAEGIEPNLVMLNVLINAFAVAGRHLEA+AIYHHIVEVGISPDVITYTTLMKAYIRAK
Sbjct: 444 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 503

Query: 497 KFHKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           KFHKVPEIYKEME AGCTPDRKAREMLKSVTV
Sbjct: 504 KFHKVPEIYKEMESAGCTPDRKAREMLKSVTV 535

[Close]
BLAST of Carg16776 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.3e-91
Identity = 180/467 (38.54%), Postives = 273/467 (58.46%), Query Frame = 0 

Query: 59  VLKLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMS 118
           +  L R N +  V    LY            +D+ EL   L N +I  + K G+   A+ 
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIE--------RDKLELDVQLVNDIIMGFAKSGDPSKALQ 298

Query: 119 LLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFL 178
           LL   +A GL A  A+   +I A  + GRTLEA+ LF+E+   G  PRT   NALL+G++
Sbjct: 299 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV 358

Query: 179 RKGLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSF 238
           + G L  A   +  M    +  ++ TY +L+D + NAGR E    ++ EM+    + NSF
Sbjct: 359 KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 418

Query: 239 VYS------KNNGMWKKAVGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKM 298
           V+S      ++ G W+K   ++ E++  G+  D+  YN +IDTFGK+  L  A+  F +M
Sbjct: 419 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 478

Query: 299 QQDGVMPDITTWNSLIQRNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKW 358
             +G+ PD  TWN+LI  +CK G    A E+F  M+ +G  P    +  +I+S G+Q +W
Sbjct: 479 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 538

Query: 359 DIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCII 418
           D +K+ L  MK +G   + + +  LVD+YG+ G+F DA +C+  +KS GL PS++ +  +
Sbjct: 539 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 598

Query: 419 ANAFARQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGI 478
            NA+A++GL E+ V   ++M ++G++P+L+ LN LINAF    R  EA A+  ++ E G+
Sbjct: 599 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 658

Query: 479 SPDVITYTTLMKAYIRAKKFHKVPEIYKEMERAGCTPDRKAREMLKS 520
            PDV+TYTTLMKA IR  KF KVP +Y+EM  +GC PDRKAR ML+S
Sbjct: 659 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRS 697

[Close]
BLAST of Carg16776 vs. ExPASy Swiss-Prot
Match: A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.8e-88
Identity = 175/433 (40.42%), Postives = 265/433 (61.20%), Query Frame = 0 

Query: 94  ELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADI 153
           E    L + LI  + +    DAA+ LL+  +A+GL     + T LI A G  GR  EA+ 
Sbjct: 225 EPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEA 284

Query: 154 LFQEMISFGR-TPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILLDYH 213
           LF E    G   PRT   NALL+G++R   L  A   L  MS   +  ++ TY +L+D +
Sbjct: 285 LFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 344

Query: 214 ANAGRLEDTWSIINEMKRKGFELNSFVYS------KNNGMWKKAVGIVDEIRKSGIYVDK 273
             AGR E    ++ EM+  G + +S+V+S      ++ G W+KA  ++ E++ SG+  D+
Sbjct: 345 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDR 404

Query: 274 HIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNCKSGNLATALELFTD 333
           H YN +IDTFGKY  L  A++ F KM+++G+ PD+ TWN+LI  +CK G    A ELF +
Sbjct: 405 HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEE 464

Query: 334 MQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQ 393
           M+E    P    +  +I+ LGEQ  W+ ++  L  MK +G   + + Y  LVD+YG+ G+
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524

Query: 394 FRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVMLNV 453
           +++A  CI A+K+ GL PS + +  + NA+A++GL +  + V++ M+A+G+E ++++LN 
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNS 584

Query: 454 LINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMERAG 513
           LINAF    R +EA ++   + E G+ PDVITYTTLMKA IR ++F KVP IY+EM  +G
Sbjct: 585 LINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644

Query: 514 CTPDRKAREMLKS 520
           C PDRKAR ML+S
Sbjct: 645 CAPDRKARAMLRS 657

[Close]
BLAST of Carg16776 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.2e-86
Identity = 172/433 (39.72%), Postives = 263/433 (60.74%), Query Frame = 0 

Query: 94  ELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADI 153
           E    L + LI  + +    DAA+ LL+  +A+GL     + T LI + G+  R  EA+ 
Sbjct: 218 EPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEA 277

Query: 154 LFQEMISFGR-TPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILLDYH 213
           LF E    G   PRT   NALL+G+++ G L  A   L  MS   +  ++ TY +L+D +
Sbjct: 278 LFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 337

Query: 214 ANAGRLEDTWSIINEMKRKGFELNSFVYS------KNNGMWKKAVGIVDEIRKSGIYVDK 273
             AGR E    ++ EM+  G + +S+V+S      ++ G W+KA  ++ E+  SG+  D+
Sbjct: 338 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 397

Query: 274 HIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNCKSGNLATALELFTD 333
           H YN +IDTFGKY  L  A++ F +M+++G+ PD+ TWN+LI  +CK G    A+ELF +
Sbjct: 398 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 457

Query: 334 MQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQ 393
           M+E         +  +I+ LGE+ +W+ ++  L  MK +G   + + Y  LVD+YG+ G+
Sbjct: 458 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGR 517

Query: 394 FRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVMLNV 453
           F++A  CI A+K+ GL PS + +  + NA+A++GL +  + V++ M A+G+E + V+LN 
Sbjct: 518 FKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 577

Query: 454 LINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMERAG 513
           LINAF    R  EA ++   + E G+ PDVITYTTLMKA IR ++F KVP IY+EM  +G
Sbjct: 578 LINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 637

Query: 514 CTPDRKAREMLKS 520
           C PDRKAR ML+S
Sbjct: 638 CAPDRKARAMLRS 650

[Close]
BLAST of Carg16776 vs. ExPASy Swiss-Prot
Match: Q9FFZ2 (Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis thaliana OX=3702 GN=At5g36300 PE=3 SV=3)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-71
Identity = 166/415 (40.00%), Postives = 225/415 (54.22%), Query Frame = 0 

Query: 95  LSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADIL 154
           +S  + N  IR +C+ G  + AMSLL+ + ++G      SY   IE   ++ RTLEAD L
Sbjct: 9   ISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADAL 68

Query: 155 FQEMISF--GRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILLDYH 214
           F E++ F    +    + NAL+  +LRK                                
Sbjct: 69  FHEVVRFMIYGSYSVRLYNALVSRYLRK-------------------------------- 128

Query: 215 ANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVGIVDEIRKSGIYVDK 274
                 E +W ++NEMK++ F LNSFVY K      +NGMWKKA+GIV+EIR+ G+ +D 
Sbjct: 129 ------EVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDV 188

Query: 275 HIYNSIIDTFGKYGQLPEALEVFKKMQQDG-VMPDITTWNSLIQRNCKSGNLATALELFT 334
            IYNS+IDTFGKYG+L E L+V +K+Q+     P+I TWNSLI+ +C  G +  ALELFT
Sbjct: 189 EIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALELFT 248

Query: 335 DMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYG 394
            +                                                          
Sbjct: 249 MI---------------------------------------------------------- 308

Query: 395 QFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVMLN 454
            F D  + +  LKS G+ PSA+ FC +ANA+A+QGLC++TVKVL++ME EGIEPNL+MLN
Sbjct: 309 -FEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLN 326

Query: 455 VLINAFAVAGRHLEAMAIYHHIVE-VGISPDVITYTTLMKAYIRAKKFHKVPEIY 500
           VLINAF  AG+H+EA++IYHHI E V I PDV+TY+TLMKA+ RAKK+  V   Y
Sbjct: 369 VLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMVCSFY 326

[Close]
BLAST of Carg16776 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.8e-47
Identity = 123/460 (26.74%), Postives = 220/460 (47.83%), Query Frame = 0 

Query: 98  DLC-------NCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLE 157
           DLC       + +++ Y ++  +D A+S++   +A G    V SY  +++A     R + 
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 158 -ADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILL 217
            A+ +F+EM+    +P     N L+RGF   G +D+A      M       N  TY  L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 218 DYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVGIVDEIRKSGIY 277
           D +    +++D + ++  M  KG E N   Y+         G  K+   ++ E+ + G  
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 278 VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNCKSGNLATALEL 337
           +D+  YN++I  + K G   +AL +  +M + G+ P + T+ SLI   CK+GN+  A+E 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 338 FTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQ 397
              M+ +G+ P+ + + TL+    ++G  +   + L  M   G   S + Y  L++ +  
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427

Query: 398 YGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVM 457
            G+  DA   +  +K  GL P   ++  + + F R    +E ++V + M  +GI+P+ + 
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487

Query: 458 LNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEME 517
            + LI  F    R  EA  +Y  ++ VG+ PD  TYT L+ AY       K  +++ EM 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547

Query: 518 RAGCTPDRKAREML------KSVTVPSKILIEELIYTKKV 538
             G  PD     +L      +S T  +K L+ +L Y + V
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

[Close]
BLAST of Carg16776 vs. ExPASy TrEMBL
Match: A0A6J1E3F2 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)

HSP 1 Score: 996.1 bits (2574), Expect = 5.8e-287
Identity = 500/510 (98.04%), Postives = 500/510 (98.04%), Query Frame = 0 

Query: 19  MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 78
           MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60

Query: 79  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 138
           NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL
Sbjct: 61  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 139 IEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDI 198
           IEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 199 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVG 258
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 259 IVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNC 318
           IVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ NC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 319 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 378
           KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 379 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 438
           VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 439 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 498
           EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 499 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           HKVPEIYKEMERAGCTPDRKAREMLKSVTV
Sbjct: 481 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 510

[Close]
BLAST of Carg16776 vs. ExPASy TrEMBL
Match: A0A6J1E8S9 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)

HSP 1 Score: 996.1 bits (2574), Expect = 5.8e-287
Identity = 500/510 (98.04%), Postives = 500/510 (98.04%), Query Frame = 0 

Query: 19  MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 78
           MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60

Query: 79  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 138
           NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL
Sbjct: 61  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 139 IEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDI 198
           IEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 199 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVG 258
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 259 IVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNC 318
           IVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ NC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 319 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 378
           KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 379 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 438
           VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 439 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 498
           EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 499 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           HKVPEIYKEMERAGCTPDRKAREMLKSVTV
Sbjct: 481 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 510

[Close]
BLAST of Carg16776 vs. ExPASy TrEMBL
Match: A0A6J1J2J8 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482835 PE=4 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 3.1e-280
Identity = 490/510 (96.08%), Postives = 495/510 (97.06%), Query Frame = 0 

Query: 19  MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 78
           MQSIFLPKTFIVYSFGGVYSGTL H+SSSKCDGRYMFGDAVL+LFRKNGLKKVSKAALYD
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLFHQSSSKCDGRYMFGDAVLQLFRKNGLKKVSKAALYD 60

Query: 79  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 138
           NYTISAR HGCKDQEELSGDLCN LIRDYCKVGNVDAAMSLLS+MEAVGLHASVASYTYL
Sbjct: 61  NYTISARCHGCKDQEELSGDLCNSLIRDYCKVGNVDAAMSLLSYMEAVGLHASVASYTYL 120

Query: 139 IEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDI 198
           IEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 199 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVG 258
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 259 IVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNC 318
           IVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ NC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 319 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 378
           KSGNL TALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL
Sbjct: 301 KSGNLPTALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 379 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 438
           VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVL+LM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELM 420

Query: 439 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 498
           EAEGIEPNLVMLNVLINAFAVAGRHLEA+AIYHHIVEVGISPDVITYTTLMKAYIRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 499 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           HKVPEIYKEME AGCTPDRKAREMLKSVTV
Sbjct: 481 HKVPEIYKEMESAGCTPDRKAREMLKSVTV 510

[Close]
BLAST of Carg16776 vs. ExPASy TrEMBL
Match: A0A6J1J5P1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482835 PE=4 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 3.1e-280
Identity = 490/510 (96.08%), Postives = 495/510 (97.06%), Query Frame = 0 

Query: 19  MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 78
           MQSIFLPKTFIVYSFGGVYSGTL H+SSSKCDGRYMFGDAVL+LFRKNGLKKVSKAALYD
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLFHQSSSKCDGRYMFGDAVLQLFRKNGLKKVSKAALYD 60

Query: 79  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 138
           NYTISAR HGCKDQEELSGDLCN LIRDYCKVGNVDAAMSLLS+MEAVGLHASVASYTYL
Sbjct: 61  NYTISARCHGCKDQEELSGDLCNSLIRDYCKVGNVDAAMSLLSYMEAVGLHASVASYTYL 120

Query: 139 IEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDI 198
           IEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 199 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVG 258
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 259 IVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNC 318
           IVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ NC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 319 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 378
           KSGNL TALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL
Sbjct: 301 KSGNLPTALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 379 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 438
           VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVL+LM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLELM 420

Query: 439 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 498
           EAEGIEPNLVMLNVLINAFAVAGRHLEA+AIYHHIVEVGISPDVITYTTLMKAYIRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 499 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           HKVPEIYKEME AGCTPDRKAREMLKSVTV
Sbjct: 481 HKVPEIYKEMESAGCTPDRKAREMLKSVTV 510

[Close]
BLAST of Carg16776 vs. ExPASy TrEMBL
Match: A0A6J1E471 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 2.0e-263
Identity = 469/510 (91.96%), Postives = 469/510 (91.96%), Query Frame = 0 

Query: 19  MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 78
           MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDG                           
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDG--------------------------- 60

Query: 79  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 138
               SARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL
Sbjct: 61  ----SARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 139 IEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDI 198
           IEAHGNVGRTLEADILFQEMISFGR PRTTVCNALLRGFLRKGLLDLASD LVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 199 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVG 258
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSK      NNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 259 IVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNC 318
           IVDEIRKSGI VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQ NC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 319 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 378
           KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 379 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 438
           VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 439 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 498
           EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 479

Query: 499 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 523
           HKVPEIYKEMERAGCTPDRKAREMLKSVTV
Sbjct: 481 HKVPEIYKEMERAGCTPDRKAREMLKSVTV 479

[Close]
BLAST of Carg16776 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 337.8 bits (865), Expect = 1.6e-92
Identity = 180/467 (38.54%), Postives = 273/467 (58.46%), Query Frame = 0 

Query: 59  VLKLFRKNGLKKVSKAALYDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMS 118
           +  L R N +  V    LY            +D+ EL   L N +I  + K G+   A+ 
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIE--------RDKLELDVQLVNDIIMGFAKSGDPSKALQ 298

Query: 119 LLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISFGRTPRTTVCNALLRGFL 178
           LL   +A GL A  A+   +I A  + GRTLEA+ LF+E+   G  PRT   NALL+G++
Sbjct: 299 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV 358

Query: 179 RKGLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSF 238
           + G L  A   +  M    +  ++ TY +L+D + NAGR E    ++ EM+    + NSF
Sbjct: 359 KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 418

Query: 239 VYS------KNNGMWKKAVGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEVFKKM 298
           V+S      ++ G W+K   ++ E++  G+  D+  YN +IDTFGK+  L  A+  F +M
Sbjct: 419 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 478

Query: 299 QQDGVMPDITTWNSLIQRNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKW 358
             +G+ PD  TWN+LI  +CK G    A E+F  M+ +G  P    +  +I+S G+Q +W
Sbjct: 479 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 538

Query: 359 DIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCII 418
           D +K+ L  MK +G   + + +  LVD+YG+ G+F DA +C+  +KS GL PS++ +  +
Sbjct: 539 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 598

Query: 419 ANAFARQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGI 478
            NA+A++GL E+ V   ++M ++G++P+L+ LN LINAF    R  EA A+  ++ E G+
Sbjct: 599 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 658

Query: 479 SPDVITYTTLMKAYIRAKKFHKVPEIYKEMERAGCTPDRKAREMLKS 520
            PDV+TYTTLMKA IR  KF KVP +Y+EM  +GC PDRKAR ML+S
Sbjct: 659 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRS 697

[Close]
BLAST of Carg16776 vs. TAIR 10
Match: AT5G36300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.6e-55
Identity = 141/388 (36.34%), Postives = 187/388 (48.20%), Query Frame = 0 

Query: 117 MSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMISF--GRTPRTTVCNALL 176
           MSLL+ + ++G      SY   IE   ++ RTLEAD LF E++ F    +    + NAL+
Sbjct: 1   MSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALV 60

Query: 177 RGFLRKGLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFE 236
             +LRK                                      E +W ++NEMK++ F 
Sbjct: 61  SRYLRK--------------------------------------EVSWRVVNEMKKRKFR 120

Query: 237 LNSFVYSK------NNGMWKKAVGIVDEIRKSGIYVDKHIYNSIIDTFGKYGQLPEALEV 296
           LNSFVY K      +NGMWKKA+GIV+EIR+ G+ +D  IYNS+IDTFGKYG+L E L  
Sbjct: 121 LNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEEL-- 180

Query: 297 FKKMQQDGVMPDITTWNSLIQRNCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGE 356
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 357 QGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASN 416
                                             Q+G F D  + +  LKS G+ PSA+ 
Sbjct: 241 ----------------------------------QFGSFEDIGELVGKLKSQGVAPSANL 254

Query: 417 FCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIV 476
           FC +ANA+A+QGLC++TVKVL++ME EGIEPNL+MLNVLINAF  AG+H+EA++IYHHI 
Sbjct: 301 FCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIK 254

Query: 477 E-VGISPDVITYTTLMKAYIRAKKFHKV 496
           E V I PDV+TY+TLMKA+ RAKK+  V
Sbjct: 361 ETVWIHPDVVTYSTLMKAFTRAKKYEMV 254

[Close]
BLAST of Carg16776 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 5.5e-48
Identity = 123/460 (26.74%), Postives = 220/460 (47.83%), Query Frame = 0 

Query: 98  DLC-------NCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLE 157
           DLC       + +++ Y ++  +D A+S++   +A G    V SY  +++A     R + 
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 158 -ADILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILL 217
            A+ +F+EM+    +P     N L+RGF   G +D+A      M       N  TY  L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 218 DYHANAGRLEDTWSIINEMKRKGFELNSFVYSK------NNGMWKKAVGIVDEIRKSGIY 277
           D +    +++D + ++  M  KG E N   Y+         G  K+   ++ E+ + G  
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 278 VDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNCKSGNLATALEL 337
           +D+  YN++I  + K G   +AL +  +M + G+ P + T+ SLI   CK+GN+  A+E 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 338 FTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQ 397
              M+ +G+ P+ + + TL+    ++G  +   + L  M   G   S + Y  L++ +  
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427

Query: 398 YGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVM 457
            G+  DA   +  +K  GL P   ++  + + F R    +E ++V + M  +GI+P+ + 
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487

Query: 458 LNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEME 517
            + LI  F    R  EA  +Y  ++ VG+ PD  TYT L+ AY       K  +++ EM 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547

Query: 518 RAGCTPDRKAREML------KSVTVPSKILIEELIYTKKV 538
             G  PD     +L      +S T  +K L+ +L Y + V
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

[Close]
BLAST of Carg16776 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 5.9e-42
Identity = 111/429 (25.87%), Postives = 189/429 (44.06%), Query Frame = 0 

Query: 92  QEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEA 151
           Q  L   +   +I    K G V +A ++ + ++  G    V SYT LI A  N GR  EA
Sbjct: 168 QSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREA 227

Query: 152 DILFQEMISFGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILLDY 211
             +F++M   G  P     N +L  F                                  
Sbjct: 228 VNVFKKMEEDGCKPTLITYNVILNVF---------------------------------- 287

Query: 212 HANAGRLEDTW----SIINEMKRKGFELNSFVYS------KNNGMWKKAVGIVDEIRKSG 271
               G++   W    S++ +MK  G   +++ Y+      K   + ++A  + +E++ +G
Sbjct: 288 ----GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG 347

Query: 272 IYVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNCKSGNLATAL 331
              DK  YN+++D +GK  +  EA++V  +M  +G  P I T+NSLI    + G L  A+
Sbjct: 348 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 407

Query: 332 ELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIY 391
           EL   M E+G  PD   + TL+S     GK +      + M+  G K +   +   + +Y
Sbjct: 408 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 467

Query: 392 GQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNL 451
           G  G+F +  K    +   GL P    +  +   F + G+  E   V + M+  G  P  
Sbjct: 468 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 527

Query: 452 VMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKE 511
              N LI+A++  G   +AM +Y  +++ G++PD+ TY T++ A  R   + +  ++  E
Sbjct: 528 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 558

[Close]
BLAST of Carg16776 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-40
Identity = 110/416 (26.44%), Postives = 183/416 (43.99%), Query Frame = 0 

Query: 101 NCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYLIEAHGNVGRTLEADILFQEMIS 160
           N ++  YCK G   AA+ LL HM++ G+ A V +Y  LI       R  +  +L ++M  
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 161 FGRTPRTTVCNALLRGFLRKGLLDLASDALVLMSDLDIQKNQETYEILLDYHANAGRLED 220
               P     N L+ GF  +G + +AS  L  M    +  N  T+  L+D H + G  ++
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 221 TWSIINEMKRKGFELNSFVYSK------NNGMWKKAVGIVDEIRKSGIYVDKHIYNSIID 280
              +   M+ KG   +   Y         N  +  A G    ++++G+ V +  Y  +ID
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 281 TFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQRNCKSGNLATALELFTDMQEQGMHP 340
              K G L EA+ +  +M +DG+ PDI T+++LI   CK G   TA E+   +   G+ P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511

Query: 341 DPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGLVYEILVDIYGQYGQFRDAEKCI 400
           +  I+ TLI +    G      +  ++M L GH      + +LV    + G+  +AE+ +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 401 SALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVA 460
             + S G+LP+  +F  + N +   G   +   V   M   G  P       L+      
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 461 GRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKFHKVPEIYKEMERAGCTPD 511
           G   EA      +  V  + D + Y TL+ A  ++    K   ++ EM +    PD
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687

The following BLAST results are available for this feature:
BLAST of Carg16776 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014862.10.0e+00100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6576841.11.5e-28998.24Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022922450.11.2e-28698.04pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
XP_022922460.11.2e-28698.04pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
XP_023551942.12.9e-28596.68pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
BLAST of Carg16776 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L8442.3e-9138.54Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop... [more]
A0A1D6IEG91.8e-8840.42Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4... [more]
Q84ZD22.2e-8639.72Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza... [more]
Q9FFZ21.2e-7140.00Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis th... [more]
Q9FIX37.8e-4726.74Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg16776 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E3F25.8e-28798.04pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
A0A6J1E8S95.8e-28798.04pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
A0A6J1J2J83.1e-28096.08pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
A0A6J1J5P13.1e-28096.08pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
A0A6J1E4712.0e-26391.96pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
BLAST of Carg16776 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42310.11.6e-9238.54Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G36300.11.6e-5536.34Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G39710.15.5e-4826.74Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.15.9e-4225.87Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G55840.11.1e-4026.44Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 242..357
e-value: 1.5E-29
score: 104.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 358..531
e-value: 1.0E-32
score: 115.8
coord: 98..241
e-value: 5.6E-28
score: 100.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 169..195
e-value: 1.2
score: 9.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 303..335
e-value: 3.0E-6
score: 25.1
coord: 204..236
e-value: 1.7E-6
score: 25.8
coord: 100..129
e-value: 3.7E-4
score: 18.5
coord: 477..510
e-value: 6.6E-10
score: 36.5
coord: 409..440
e-value: 2.1E-4
score: 19.2
coord: 268..300
e-value: 9.3E-8
score: 29.8
coord: 443..476
e-value: 3.6E-5
score: 21.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 97..144
e-value: 5.2E-4
score: 20.0
coord: 401..451
e-value: 1.9E-4
score: 21.4
coord: 463..510
e-value: 3.4E-9
score: 36.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 266..309
e-value: 9.0E-10
score: 38.6
coord: 201..241
e-value: 4.4E-7
score: 30.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 12.517862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 12.616514
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..235
score: 10.610596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 10.018685
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 405..439
score: 9.229472
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 96..130
score: 9.470621
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..509
score: 12.572669
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 131..165
score: 9.536388
NoneNo IPR availablePANTHERPTHR47942:SF13OS06G0710800 PROTEINcoord: 79..522
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 79..522

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16776-RACarg16776-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding