Carg16664 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16664
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like
Location	Carg_Chr15: 8470945 .. 8472921 (+)
RNA-Seq Expression	Carg16664
Synteny	Carg16664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTATTATAAATCCTCCGGATTCAGATGGAAGACAAAAACTGAGCCTCTTCTTCTTCTTCTTCTTCAATCCTTAATCAATCCAGTTCCTTCTGCTATCAGCCATGGGTGTTCTTGCTGACAGTGGCTCAGCTCCGTCGCTCAAGTTCTTGATTTACGGCCGTACCGGCTGGATTGGCGGTTTGCTTGGGAAGATCTGTGAACAACAGGGAATTCATTTCGCTTATGGCTCTGGCCGCCTCGAGAACCGTGTCTCCCTTGAGGCCGACATCGACGCCGTTAAGCCCACTCATGTCTTCAACGCCGCTGGCGTCACTGGTCGCCCGAATGTCGACTGGTGCGAATCGCATAAGGTCGAGACCATTAGAACCAATGTGGTTGGAACCTTGAGTTTGGCCGATGTGTGCCGTGAGAGAGGGTTGATCTTGATTAATTACGCTACTGGATGCATTTTCGAGTACGATTCGGCGCATCCTCTCAATTCCGGGATTGGATTCAAGGAGGATGAAATCCCTAACTTCATTGGATCGTTTTATTCCAAGACTAAAGCTATGGTAAGTTCCTGATTTTCACTGCTTGATTGTTGTTGTTGTTCTTGTTTTCCTCTTCTGTTGGAACTTGGTGTTGTATGTATTTAGATTCATTCTGAATTTTGATTTTAGATCTATAAGACCAGAGTGAATTGTTTTATTTAGAGAAATCACAACTGAAATCTGCCATCATTGTGCTTGATATTAGGGATTTGTTTTCCAAGTCAAATAGGTCATTTTGAGATTGGATTTTTGCTTGGCGGAGTTTGTGAATGTTCTTTAGATCTGGATTGCTATTACATTGATTAGAAAGAATTATACATGGTTGTCTTGAATATTCTGATCATTGATCGCTGTTTTGATGAAAATGCATCAAATGTGTTCTTTGAACCCGATGGGCTGATCCTATTTTTATGTCACTTTCACATTTTGGGGGTTAAAAAGGTGGAGGATCTGCTGAAGAACTATGAGAATGTGTGCACCTTGCGGGTTCGGATGCCCATATCCTCTGACTTATCTAATCCTCGCAACTTCATTACGAAGATAACCAGATATGAGAAGGTTGTCGACATCCCGAACTCGATGACAATCTTGGACGAACTCCTCCCGATCTCAATCGAAATGGCGAAAAGAAACCTCACTGGAATATGGAACTTCACCAACCCGGGAGTGGTGAGCCACAATGAGATCTTGGAAATGTACAAGCAATTCATTGACCCCAATTTCACATGGAAGAACTTCACTCTGGAGGAGCAAGCCAAAGTGATCGTCGCTCCACGGAGCAACAACGAGCTCGACGCAACCAAGTTGAAGAATGAATTCCCTGAACTCCTATCCATCAAGGACTCCCTAATCAAGAATGTGTTCAAGCCAAATCAGAAAACCTCTGCAGCTTAAGATCATTGGTATTTCTGATCCATATGTCCTCTTCTTTGTGTTTCTCCTTAGCCACTTCCATTGATTCGAATCTTTGACGACGAGTTCTCGAATATCAAAGCTTTCCCCTTGATTTCCCATACAACATAGAAGCTTGATTATTATCCATATTTGAATACCATATCTATTATTTTGTTCATCATTTGAATAAAAGTAGCTTGAAATCCTATGTAGAACAAGATGTAGCATTTTGGTATCTGTAACTTTACTGATTTGGGTATAAGATATTACTGAGAACTTATGTGTTTTATGAGTAAGGATTTCTATATTACTGGTTGAAATTGTTCGTGAATGTAGTTATCAATGATTCCCAACTGCTCTCAAGCCTCGTAAACTCTGTCTCCTTCTCTCTTATGAAAGTGAAATATTTCCTTATTGTTATCTATTCTTTGATTTCTGTAGTTTTCTGGCTCTTCTGGAAATGGAAATGATGATGATGATGATTAAACTATCCATGAATGAAACATTGGATTTCTTGATGAACAAACAGCCAAACCCTAATGGGGTTTCGC

mRNA sequence

TATTATTATAAATCCTCCGGATTCAGATGGAAGACAAAAACTGAGCCTCTTCTTCTTCTTCTTCTTCAATCCTTAATCAATCCAGTTCCTTCTGCTATCAGCCATGGGTGTTCTTGCTGACAGTGGCTCAGCTCCGTCGCTCAAGTTCTTGATTTACGGCCGTACCGGCTGGATTGGCGGTTTGCTTGGGAAGATCTGTGAACAACAGGGAATTCATTTCGCTTATGGCTCTGGCCGCCTCGAGAACCGTGTCTCCCTTGAGGCCGACATCGACGCCGTTAAGCCCACTCATGTCTTCAACGCCGCTGGCGTCACTGGTCGCCCGAATGTCGACTGGTGCGAATCGCATAAGGTCGAGACCATTAGAACCAATGTGGTTGGAACCTTGAGTTTGGCCGATGTGTGCCGTGAGAGAGGGTTGATCTTGATTAATTACGCTACTGGATGCATTTTCGAGTACGATTCGGCGCATCCTCTCAATTCCGGGATTGGATTCAAGGAGGATGAAATCCCTAACTTCATTGGATCGTTTTATTCCAAGACTAAAGCTATGGTGGAGGATCTGCTGAAGAACTATGAGAATGTGTGCACCTTGCGGGTTCGGATGCCCATATCCTCTGACTTATCTAATCCTCGCAACTTCATTACGAAGATAACCAGATATGAGAAGGTTGTCGACATCCCGAACTCGATGACAATCTTGGACGAACTCCTCCCGATCTCAATCGAAATGGCGAAAAGAAACCTCACTGGAATATGGAACTTCACCAACCCGGGAGTGGTGAGCCACAATGAGATCTTGGAAATGTACAAGCAATTCATTGACCCCAATTTCACATGGAAGAACTTCACTCTGGAGGAGCAAGCCAAAGTGATCGTCGCTCCACGGAGCAACAACGAGCTCGACGCAACCAAGTTGAAGAATGAATTCCCTGAACTCCTATCCATCAAGGACTCCCTAATCAAGAATGTGTTCAAGCCAAATCAGAAAACCTCTGCAGCTTAAGATCATTGGTATTTCTGATCCATATGTCCTCTTCTTTGTGTTTCTCCTTAGCCACTTCCATTGATTCGAATCTTTGACGACGAGTTCTCGAATATCAAAGCTTTCCCCTTGATTTCCCATACAACATAGAAGCTTGATTATTATCCATATTTGAATACCATATCTATTATTTTGTTCATCATTTGAATAAAAGTAGCTTGAAATCCTATGTAGAACAAGATGTAGCATTTTGGTATCTGTAACTTTACTGATTTGGGTATAAGATATTACTGAGAACTTATGTGTTTTATGAGTAAGGATTTCTATATTACTGGTTGAAATTGTTCGTGAATGTAGTTATCAATGATTCCCAACTGCTCTCAAGCCTCGTAAACTCTGTCTCCTTCTCTCTTATGAAAGTGAAATATTTCCTTATTGTTATCTATTCTTTGATTTCTGTAGTTTTCTGGCTCTTCTGGAAATGGAAATGATGATGATGATGATTAAACTATCCATGAATGAAACATTGGATTTCTTGATGAACAAACAGCCAAACCCTAATGGGGTTTCGC

Coding sequence (CDS)

ATGGGTGTTCTTGCTGACAGTGGCTCAGCTCCGTCGCTCAAGTTCTTGATTTACGGCCGTACCGGCTGGATTGGCGGTTTGCTTGGGAAGATCTGTGAACAACAGGGAATTCATTTCGCTTATGGCTCTGGCCGCCTCGAGAACCGTGTCTCCCTTGAGGCCGACATCGACGCCGTTAAGCCCACTCATGTCTTCAACGCCGCTGGCGTCACTGGTCGCCCGAATGTCGACTGGTGCGAATCGCATAAGGTCGAGACCATTAGAACCAATGTGGTTGGAACCTTGAGTTTGGCCGATGTGTGCCGTGAGAGAGGGTTGATCTTGATTAATTACGCTACTGGATGCATTTTCGAGTACGATTCGGCGCATCCTCTCAATTCCGGGATTGGATTCAAGGAGGATGAAATCCCTAACTTCATTGGATCGTTTTATTCCAAGACTAAAGCTATGGTGGAGGATCTGCTGAAGAACTATGAGAATGTGTGCACCTTGCGGGTTCGGATGCCCATATCCTCTGACTTATCTAATCCTCGCAACTTCATTACGAAGATAACCAGATATGAGAAGGTTGTCGACATCCCGAACTCGATGACAATCTTGGACGAACTCCTCCCGATCTCAATCGAAATGGCGAAAAGAAACCTCACTGGAATATGGAACTTCACCAACCCGGGAGTGGTGAGCCACAATGAGATCTTGGAAATGTACAAGCAATTCATTGACCCCAATTTCACATGGAAGAACTTCACTCTGGAGGAGCAAGCCAAAGTGATCGTCGCTCCACGGAGCAACAACGAGCTCGACGCAACCAAGTTGAAGAATGAATTCCCTGAACTCCTATCCATCAAGGACTCCCTAATCAAGAATGTGTTCAAGCCAAATCAGAAAACCTCTGCAGCTTAA

Protein sequence

MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA

Homology

[Close]

BLAST of Carg16664 vs. NCBI nr
Match: KAG6579471.1 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016940.1 Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 612.1 bits (1577), Expect = 2.6e-171
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg16664 vs. NCBI nr
Match: XP_023549712.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 610.5 bits (1573), Expect = 7.6e-171
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIK+SLIKNVFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg16664 vs. NCBI nr
Match: XP_022922271.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita moschata])

HSP 1 Score: 609.8 bits (1571), Expect = 1.3e-170
Identity = 299/300 (99.67%), Postives = 299/300 (99.67%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
            AHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 LAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg16664 vs. NCBI nr
Match: XP_022969861.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita maxima])

HSP 1 Score: 604.0 bits (1556), Expect = 7.1e-169
Identity = 297/300 (99.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MGVLADS SAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADI AVK
Sbjct: 1   MGVLADSVSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIK+SLIKNVFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg16664 vs. NCBI nr
Match: XP_038875992.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Benincasa hispida])

HSP 1 Score: 587.8 bits (1514), Expect = 5.3e-164
Identity = 286/300 (95.33%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MG+LADSGS PSLKFLIYGRTGWIGGLLG +C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGILADSGSGPSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKED+ PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNFTL+EQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIK VFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLDEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300

[Close]

BLAST of Carg16664 vs. ExPASy Swiss-Prot
Match: Q9LQ04 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Arabidopsis thaliana OX=3702 GN=NRS/ER PE=1 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 3.6e-147
Identity = 247/293 (84.30%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 5   ADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHV 64
           A+  S+ S  FLIYG+TGWIGGLLGK+CE QGI + YGSGRL++R S+ ADI++VKP+HV
Sbjct: 5   ANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHV 64

Query: 65  FNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHP 124
           FNAAGVTGRPNVDWCESHKVETIRTNV GTL+LAD+CRE+GL+LINYATGCIFEYDS HP
Sbjct: 65  FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHP 124

Query: 125 LNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKI 184
           L SGIGFKE++ PNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI
Sbjct: 125 LGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKI 184

Query: 185 TRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNF 244
            RYEKVVDIPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMY+ +IDP+F
Sbjct: 185 ARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSF 244

Query: 245 TWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
           TWKNFTLEEQAKVIVAPRSNNELDATKLK EFPEL+SIK+SLIK VF+PN+KT
Sbjct: 245 TWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of Carg16664 vs. ExPASy Swiss-Prot
Match: Q9SYM5 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana OX=3702 GN=RHM1 PE=1 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 4.0e-138
Identity = 231/287 (80.49%), Postives = 259/287 (90.24%), Query Frame = 0


Query: 11  PSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFNAAGV 70
           PSLKFLIYG+TGWIGGLLGKIC++QGI + YG GRLE+R SL  DI +VKPTHVFN+AGV
Sbjct: 383 PSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGV 442

Query: 71  TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNSGIG 130
           TGRPNVDWCESHK ETIR NV GTL+LADVCRE GL+++N+ATGCIFEYD  HP  SGIG
Sbjct: 443 TGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIG 502

Query: 131 FKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKV 190
           FKE++ PNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KV
Sbjct: 503 FKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKV 562

Query: 191 VDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFT 250
           V+IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ +I+P F W NFT
Sbjct: 563 VNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFT 622

Query: 251 LEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
           LEEQAKVIVAPRSNNE+DA+KLK EFPELLSIK+SLIK  + PN+KT
Sbjct: 623 LEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of Carg16664 vs. ExPASy Swiss-Prot
Match: Q9LH76 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 OS=Arabidopsis thaliana OX=3702 GN=RHM3 PE=2 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 5.7e-137
Identity = 228/291 (78.35%), Postives = 261/291 (89.69%), Query Frame = 0


Query: 7   SGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFN 66
           SG   SLKFLIYG+TGW+GGLLGK+CE+QGI + YG GRLE+R SL ADI ++KP+HVFN
Sbjct: 374 SGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFN 433

Query: 67  AAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLN 126
           AAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+AHP  
Sbjct: 434 AAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEG 493

Query: 127 SGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITR 186
           SGIGFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+R
Sbjct: 494 SGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISR 553

Query: 187 YEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTW 246
           Y KVV+IPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P+F W
Sbjct: 554 YNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKW 613

Query: 247 KNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
            NF LEEQAKVIVAPRSNNE+D  KL  EFPE+LSIKDSLIK VF+PN++T
Sbjct: 614 SNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of Carg16664 vs. ExPASy Swiss-Prot
Match: Q9LPG6 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana OX=3702 GN=RHM2 PE=1 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 7.5e-137
Identity = 226/292 (77.40%), Postives = 261/292 (89.38%), Query Frame = 0


Query: 6   DSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVF 65
           DSG   SLKFLIYG+TGW+GGLLGK+CE+QGI + YG GRLE+R SL ADI ++KPTHVF
Sbjct: 376 DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVF 435

Query: 66  NAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPL 125
           NAAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+ HP 
Sbjct: 436 NAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPE 495

Query: 126 NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 185
            SGIGFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 496 GSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKIS 555

Query: 186 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFT 245
           RY KVVDIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P F 
Sbjct: 556 RYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFK 615

Query: 246 WKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
           W NFT+EEQAKVIVA RSNNE+D +KL  EFPE+LSIK+SL+K VF+PN++T
Sbjct: 616 WSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of Carg16664 vs. ExPASy Swiss-Prot
Match: Q5UPS5 (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L780 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.3e-56
Identity = 116/286 (40.56%), Postives = 174/286 (60.84%), Query Frame = 0


Query: 13  LKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFNAAGVT- 72
           +K+LI+G  GWIG ++ KI EQQG        R ++  ++E +I  +KP  V +  G T 
Sbjct: 1   MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTH 60

Query: 73  --GRPNVDWCE--SHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNS 132
             G   +D+ E     VE ++ N+ G L LA +C++  + L    TGCIFE  +    + 
Sbjct: 61  GPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADE 120

Query: 133 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYEN-VCTLRVRMPISSDLSNPRNFITKITR 192
             GF E++ PNF GS YS  K   + L+  ++N V  LR+RMPI+ +  NPR+FITKI  
Sbjct: 121 K-GFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILS 180

Query: 193 YEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTW 252
           Y ++  IPNSMTILD+++P+ I+MA+   TG +NFTNPG+VSHNEIL + +    PN TW
Sbjct: 181 YSRICSIPNSMTILDQMIPVMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTW 240

Query: 253 KNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFK 293
           +N + E+Q  ++ A RSNN L+  KL++ +P++  I   + + V K
Sbjct: 241 ENMSREQQLAILKADRSNNLLNTDKLQSLYPDVPDILTGIREVVSK 284

[Close]

BLAST of Carg16664 vs. ExPASy TrEMBL
Match: A0A6J1E3P2 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111430302 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 6.3e-171
Identity = 299/300 (99.67%), Postives = 299/300 (99.67%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
            AHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 LAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg16664 vs. ExPASy TrEMBL
Match: A0A6J1HYZ2 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111468931 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.5e-169
Identity = 297/300 (99.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MGVLADS SAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADI AVK
Sbjct: 1   MGVLADSVSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIK+SLIKNVFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg16664 vs. ExPASy TrEMBL
Match: A0A5A7TLE8 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003090 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.4e-162
Identity = 283/300 (94.33%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MG+LADSGS  SLKFLIYGRTGWIGGLLG +C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHP+NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNF LEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSL+K VFKPNQKT  A
Sbjct: 241 DPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of Carg16664 vs. ExPASy TrEMBL
Match: A0A1S3AU07 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Cucumis melo OX=3656 GN=LOC103482697 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.4e-162
Identity = 283/300 (94.33%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MG+LADSGS  SLKFLIYGRTGWIGGLLG +C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHP+NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPNFTWKNF LEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSL+K VFKPNQKT  A
Sbjct: 241 DPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of Carg16664 vs. ExPASy TrEMBL
Match: A0A6J1K354 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111491279 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 4.1e-162
Identity = 283/300 (94.33%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60
           MG+LADSGS P LKFLIYGRTGWIGGLLG++C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGILADSGSGP-LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DATKLK EFPELLSIKDSL+K+VFKPNQKTSAA
Sbjct: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTSAA 299

[Close]

BLAST of Carg16664 vs. TAIR 10
Match: AT1G63000.1 (nucleotide-rhamnose synthase/epimerase-reductase )

HSP 1 Score: 522.3 bits (1344), Expect = 2.5e-148
Identity = 247/293 (84.30%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 5   ADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHV 64
           A+  S+ S  FLIYG+TGWIGGLLGK+CE QGI + YGSGRL++R S+ ADI++VKP+HV
Sbjct: 5   ANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHV 64

Query: 65  FNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHP 124
           FNAAGVTGRPNVDWCESHKVETIRTNV GTL+LAD+CRE+GL+LINYATGCIFEYDS HP
Sbjct: 65  FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHP 124

Query: 125 LNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKI 184
           L SGIGFKE++ PNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI
Sbjct: 125 LGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKI 184

Query: 185 TRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNF 244
            RYEKVVDIPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMY+ +IDP+F
Sbjct: 185 ARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSF 244

Query: 245 TWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
           TWKNFTLEEQAKVIVAPRSNNELDATKLK EFPEL+SIK+SLIK VF+PN+KT
Sbjct: 245 TWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of Carg16664 vs. TAIR 10
Match: AT1G78570.1 (rhamnose biosynthesis 1 )

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-139
Identity = 231/287 (80.49%), Postives = 259/287 (90.24%), Query Frame = 0


Query: 11  PSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFNAAGV 70
           PSLKFLIYG+TGWIGGLLGKIC++QGI + YG GRLE+R SL  DI +VKPTHVFN+AGV
Sbjct: 383 PSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGV 442

Query: 71  TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNSGIG 130
           TGRPNVDWCESHK ETIR NV GTL+LADVCRE GL+++N+ATGCIFEYD  HP  SGIG
Sbjct: 443 TGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIG 502

Query: 131 FKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKV 190
           FKE++ PNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KV
Sbjct: 503 FKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKV 562

Query: 191 VDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFT 250
           V+IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ +I+P F W NFT
Sbjct: 563 VNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFT 622

Query: 251 LEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
           LEEQAKVIVAPRSNNE+DA+KLK EFPELLSIK+SLIK  + PN+KT
Sbjct: 623 LEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of Carg16664 vs. TAIR 10
Match: AT3G14790.1 (rhamnose biosynthesis 3 )

HSP 1 Score: 488.4 bits (1256), Expect = 4.1e-138
Identity = 228/291 (78.35%), Postives = 261/291 (89.69%), Query Frame = 0


Query: 7   SGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFN 66
           SG   SLKFLIYG+TGW+GGLLGK+CE+QGI + YG GRLE+R SL ADI ++KP+HVFN
Sbjct: 374 SGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFN 433

Query: 67  AAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLN 126
           AAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+AHP  
Sbjct: 434 AAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEG 493

Query: 127 SGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITR 186
           SGIGFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+R
Sbjct: 494 SGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISR 553

Query: 187 YEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTW 246
           Y KVV+IPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P+F W
Sbjct: 554 YNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKW 613

Query: 247 KNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
            NF LEEQAKVIVAPRSNNE+D  KL  EFPE+LSIKDSLIK VF+PN++T
Sbjct: 614 SNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of Carg16664 vs. TAIR 10
Match: AT1G53500.1 (NAD-dependent epimerase/dehydratase family protein )

HSP 1 Score: 488.0 bits (1255), Expect = 5.3e-138
Identity = 226/292 (77.40%), Postives = 261/292 (89.38%), Query Frame = 0


Query: 6   DSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVF 65
           DSG   SLKFLIYG+TGW+GGLLGK+CE+QGI + YG GRLE+R SL ADI ++KPTHVF
Sbjct: 376 DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVF 435

Query: 66  NAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPL 125
           NAAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+ HP 
Sbjct: 436 NAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPE 495

Query: 126 NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 185
            SGIGFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 496 GSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKIS 555

Query: 186 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFT 245
           RY KVVDIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P F 
Sbjct: 556 RYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFK 615

Query: 246 WKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKT 298
           W NFT+EEQAKVIVA RSNNE+D +KL  EFPE+LSIK+SL+K VF+PN++T
Sbjct: 616 WSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of Carg16664 vs. TAIR 10
Match: AT5G59290.1 (UDP-glucuronic acid decarboxylase 3 )

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08
Identity = 61/266 (22.93%), Postives = 114/266 (42.86%), Query Frame = 0


Query: 11  PSLKFLIYGRTGWIGG-LLGKICEQQG----IHFAYGSGRLENRVS---------LEADI 70
           P+++ LI G  G+IG  L+ K+ E +     +   Y +G  EN            +  D+
Sbjct: 28  PNMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDV 87

Query: 71  DAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCI 130
                  V     +    +  + + + V+TI+TNV+GTL++  + +  G  ++  +T  +
Sbjct: 88  TEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV 147

Query: 131 FEYDSAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSN 190
           +     HP      +  +  P  + S Y + K + E L+ +Y     + +R+    +   
Sbjct: 148 YGDPLIHPQPE--SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 207

Query: 191 PR----------NFITKITRYEKV-VDIPNSMT----ILDELLPISIEMAKRNLTGIWNF 248
           PR          NFI +  R E + V  P + T     + +++   I + + N TG  N 
Sbjct: 208 PRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEGNDTGPINI 267

The following BLAST results are available for this feature:

BLAST of Carg16664 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579471.1	2.6e-171	100.00	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_023549712.1	7.6e-171	99.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_022922271.1	1.3e-170	99.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_022969861.1	7.1e-169	99.00	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_038875992.1	5.3e-164	95.33	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

BLAST of Carg16664 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ04	3.6e-147	84.30	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
Q9SYM5	4.0e-138	80.49	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9LH76	5.7e-137	78.35	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9LPG6	7.5e-137	77.40	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q5UPS5	1.3e-56	40.56	Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MI...	[more]

BLAST of Carg16664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3P2	6.3e-171	99.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A6J1HYZ2	3.5e-169	99.00	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A5A7TLE8	1.4e-162	94.33	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A1S3AU07	1.4e-162	94.33	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A6J1K354	4.1e-162	94.33	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

BLAST of Carg16664 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63000.1	2.5e-148	84.30	nucleotide-rhamnose synthase/epimerase-reductase	[more]
AT1G78570.1	2.8e-139	80.49	rhamnose biosynthesis 1	[more]
AT3G14790.1	4.1e-138	78.35	rhamnose biosynthesis 3	[more]
AT1G53500.1	5.3e-138	77.40	NAD-dependent epimerase/dehydratase family protein	[more]
AT5G59290.1	1.8e-08	22.93	UDP-glucuronic acid decarboxylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 5..300 e-value: 5.7E-80 score: 270.7
None	No IPR available	PANTHER	PTHR43000	DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED	coord: 9..295
None	No IPR available	PANTHER	PTHR43000:SF26	BNAC05G13120D PROTEIN	coord: 9..295
None	No IPR available	CDD	cd05254	dTDP_HR_like_SDR_e	coord: 14..286 e-value: 5.15345E-61 score: 193.612
IPR029903	RmlD-like substrate binding domain	PFAM	PF04321	RmlD_sub_bind	coord: 14..187 e-value: 8.7E-14 score: 51.3
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 13..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16664-RA	Carg16664-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019305	dTDP-rhamnose biosynthetic process
biological_process	GO:0010253	UDP-rhamnose biosynthetic process
molecular_function	GO:0008830	dTDP-4-dehydrorhamnose 3,5-epimerase activity
molecular_function	GO:0008831	dTDP-4-dehydrorhamnose reductase activity