Carg16647 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16647
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	tetraspanin-10-like
Location	Carg_Chr15: 8623402 .. 8626522 (+)
RNA-Seq Expression	Carg16647
Synteny	Carg16647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTCCTTTGACGAAAATGCCCTTGCCCTTATTTCATTATCCCTACTCCACCCCACCACCTCACTCTAGCCGCTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCTCAGCTAAGCTCTGAAGAACCTCCATTCTTTCTCTTTTCTATATTTTGCCCTTTTTGGCCCTGTTTATCTCTGTTTCTGGGTGTGGCGTTGGGGATAAGGAGGTTCAAGGGAAGAGGGGCAAAATGGGAATGGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGGTATGCTTGATTTCTCTTGATTTTACCCTTTTTTTTGGTTTCTTTCTAAGATGATGTTTTATGTTCCATTGTTTTGTGGGCTTTTGTTCTGTTTTTTTTAGCTCCCATGTCTTTGGATTTAGTTTGAATGTCGTGTAATGGGTTCTGTTTATGTTGTTTCCAGTGTGTTTGTTGGGGTTTCTTGTATATGTTCGATGAGTTTCATCGTTTAGTTTTTCATTTTTTTTAAGGTTCTTGTTGGGTTGTCTTTGACATTGCTTTGAATGGTTGTTTATGTTTGGTTTGATGTCCATTTGGTTTTTTGCTCTTGATTTTTGAAAACTAAGCTTATAAACACCAAGATTGAAGAGAAAAGAAGACAAGACATCTTCCCAAGATCATGGATCAAAGATATTATAATGATGTTTTTTAATTTACAGAAAACACAGATATAAGCCATACTCCATCAAGAACAACTATCACACACGGCTCAATCCCACCGCTAGCGGATATTGTCCTCTTTGAGCTTTCTCTTAAGATTTTTAAACGCGTCTAGGTTGCGTAGCTCTGAAAGACGCGTTAACCTTTAAGGGAAGCCCGGGAGGGAAAGTCGAAAGAGACGATATCTGTTAGCGGTGGGCTTTGACTGTTATACTTGATGATGGCAAGATTGATGGCTATTGAATCACTGTGTGTGTACATTTTACAGCTTCTGGCTGTTCTTGTCATAATATTTGGGATATGGATGGGCACCAACCACGACGGTTGTCGAAAATCTCTAACGCTTCCTGTTATGGGACTCGGTGGATTCATCTTCGTGGTGTAAGTTCTATATCTTTAAGGAGTTTAATCTGATTCCATCATCCAATCTTGTTGTTATCAATACTTTTGATTCAGGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGATATTGCTGTGGATCGTATCCTTTTAACGAACGTTTATATGAACAGTTGATGTTAGTTTTCTTGAATTTCGCTCGACCTTGACCTTCTGCTAATAGTATTTGATCATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTAAGTATATTTTTCTAATGTTCTTTTGTCACATGTTCCTAAAATTTATTGTCTTGAAACTATGTTGCTTCCTCACATCTCCTACTTAGATGTGTGCCTCAAGGTAGAATTTAGTACTTGTTCTTTAGTGTTCTTGTCTCACGGTCTTGCCAAACGAGATCTTCAAAGCACTTCCCGAGGCTTTTCGATGTGCTTATGCATCGTTATTGGTTATACGGTGCTACGAGAGGGTCAGTCAATCCTTAAATATTTACTCTGTCTGTGTCGGTTTTTGAGTTTATTGGCAAATTAGAAGATTCAGCAAGTACTTTTCTAACAAGCCCTCGAAAGTAACTTTCGTACGTTATGTGGTCGATTTGTAGCTCACATGAACACGTCTTGGATTTCAAGTCATGTGGGCAAAGGCTCTAACAATCAAACCCTCTAATTAATATCAAAGGTCATGATATGAGAAGTGTAACAACTCAAGCCCACCGCTAGCAAATATTGTCCGCCTTGACCTGTTACGTATCGCCATCAGTCTCACAGTTTTAAAACGCGTCTGTTAAGGAGAGTTTTCCACACCCTTATAAGGAATGTTTCTTTCTCCTCTCCAACCATTGTGAGATCTCACAATTCACCCCCTTGGGGCTAACGTCCTTGCTGGCACACCGCTCGGTACCTGATTTGATACCATCTGTAACAGTTCAAGTCCACTGCTAGCAGATATTGTCCGCTTTGACCTGTTACGTATTGCCATCAGTCTCACGGTTTAAAAACGAGTCTGTTAGGGAGAGTTTTCCAGACCCTTATAAGGAATGTTTCGTTTTCCTCTCCAACCAATGTGGGATCTCACAATTCACTCTCCTTGGGGGCCAGCGTCCTCACTGGCACACTGCTCGGTGTCGGCTCTGATACCATTTGTAACAGCCCAAGTCTACTGCTAACAGATATTGTCCGCTTTGGCCCGTTACGTATCGCCGTCAGCCTCACGGTTTTAAAACGCGTCTGTTATGGAGAGCTTTCCACACCCTTATAAGGAATGTTTCATTCTTCTCTCCAACCGACGTGGGATCTCACCAGAAGTACTTAACTTTCTTTGTTATCTTCACATGAGCCCCTTCGAGATATAAAACAAAATATCAAAGTGGACATCCATAGTTGCTGCCATCTTGTAGCTAGTAACACATATCAAGCTTTGTTGTCGGTATATAATGACTCGACTTTCTTTTAGGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTGGCTTGAGGTGAGGATATACTCAACTCATTAAAAAAAAGGTTCATTTTAAGTCCTTTTGTCTCGAGGATACCGAGATCGAAAGAATGGAAATGGGAATGGCCATGACTCTCATGATTCTCGAAGTTCGGTATTCGTTGAGTCGATAAGCTACCGTTCTATGGACTGATGTTTTCCCCCCTTCTCTTCCCCTTTATGAGGTACAAGGAGTATCAACTACAAGACTATAGTACATGGTTTCTAAAACAGGTGAGTTCATTTTGCATAGAGAGACAGAAAGACATCATTATTTATCTTAATCTTAGCTCACCTGTTACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAGGACTGCAACAATCTTTCGAAACGATACAAGGTTCTTGTTTCAAGCTCGGTCGATTTGAGTAAAAGAGTGATTTTTCTATCGTCTCTTCCTCACGATAGTCGTTTTGTTTGATAATTTCAGACTCTCAAGCAGTACAAGTTA

mRNA sequence

TTTTTTTTTTCCTTTGACGAAAATGCCCTTGCCCTTATTTCATTATCCCTACTCCACCCCACCACCTCACTCTAGCCGCTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCTCAGCTAAGCTCTGAAGAACCTCCATTCTTTCTCTTTTCTATATTTTGCCCTTTTTGGCCCTGTTTATCTCTGTTTCTGGGTGTGGCGTTGGGGATAAGGAGGTTCAAGGGAAGAGGGGCAAAATGGGAATGGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGATATTGCTGTGGATCTATTTGATCATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTGGCTTGAGGTACAAGGAGTATCAACTACAAGACTATAGTACATGGTTTCTAAAACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAGGACTGCAACAATCTTTCGAAACGATACAAGGTTCTTGTTTCAAGCTCGGTCGATTTGAGTAAAAGAGTGATTTTTCTATCGTCTCTTCCTCACGATAGTCGTTTTGTTTGATAATTTCAGACTCTCAAGCAGTACAAGTTA

Coding sequence (CDS)

ATGCCCTTGCCCTTATTTCATTATCCCTACTCCACCCCACCACCTCACTCTAGCCGCTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCTCAGCTAAGCTCTGAAGAACCTCCATTCTTTCTCTTTTCTATATTTTGCCCTTTTTGGCCCTGTTTATCTCTGTTTCTGGGTGTGGCGTTGGGGATAAGGAGGTTCAAGGGAAGAGGGGCAAAATGGGAATGGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGATATTGCTGTGGATCTATTTGATCATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTGGCTTGAGGTACAAGGAGTATCAACTACAAGACTATAGTACATGGTTTCTAAAACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAGGACTGCAACAATCTTTCGAAACGATACAAGGTTCTTGTTTCAAGCTCGGTCGATTTGAGTAAAAGAGTGATTTTTCTATCGTCTCTTCCTCACGATAGTCGTTTTGTTTGA

Protein sequence

MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVLVSSSVDLSKRVIFLSSLPHDSRFV

Homology

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BLAST of Carg16647 vs. NCBI nr
Match: KAG7016957.1 (Tetraspanin-10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 425.2 bits (1092), Expect = 3.2e-115
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVAL 60
           MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVAL
Sbjct: 1   MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVAL 60

Query: 61  GIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAIL 120
           GIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAIL
Sbjct: 61  GIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAIL 120

Query: 121 VFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN 180
           VFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN
Sbjct: 121 VFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN 180

Query: 181 LSKRYKVLVSSSVDLSKRVIFLSSLPHDSRFV 213
           LSKRYKVLVSSSVDLSKRVIFLSSLPHDSRFV
Sbjct: 181 LSKRYKVLVSSSVDLSKRVIFLSSLPHDSRFV 212

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BLAST of Carg16647 vs. NCBI nr
Match: XP_022928823.1 (tetraspanin-10-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 295.0 bits (754), Expect = 5.0e-76
Identity = 148/188 (78.72%), Postives = 148/188 (78.72%), Query Frame = 0


Query: 1   MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVAL 60
           MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEE PFFLF IFCPFWPCLSLFLGVAL
Sbjct: 1   MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEETPFFLFFIFCPFWPCLSLFLGVAL 60

Query: 61  GIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAIL 120
           GIRRFKGRGAKWEWELASLSSDGSIFSPW                               
Sbjct: 61  GIRRFKGRGAKWEWELASLSSDGSIFSPW------------------------------- 120

Query: 121 VFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN 180
                 FIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN
Sbjct: 121 ------FIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN 151

Query: 181 LSKRYKVL 189
           LSKRYK L
Sbjct: 181 LSKRYKTL 151

[Close]

BLAST of Carg16647 vs. NCBI nr
Match: XP_022928822.1 (tetraspanin-10-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 5.4e-46
Identity = 106/137 (77.37%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 52  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIM 111
           L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIM
Sbjct: 23  LVIIFGIWMGTNH---DGCRKSLTLPVMGLGGFIFVV-SIVGFLGALKNNSILLWIYLIM 82

Query: 112 LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 171
           LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC
Sbjct: 83  LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 142

Query: 172 LVKSEDCNNLSKRYKVL 189
           LVKSEDCNNLSKRYK L
Sbjct: 143 LVKSEDCNNLSKRYKTL 155

[Close]

BLAST of Carg16647 vs. NCBI nr
Match: KAG6579494.1 (Tetraspanin-10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.3 bits (495), Expect = 5.4e-46
Identity = 106/137 (77.37%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 52  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIM 111
           L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIM
Sbjct: 23  LVIIFGIWMGTNH---DGCRKSLTLPVMGLGGFIFVV-SIVGFLGALKNNSILLWIYLIM 82

Query: 112 LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 171
           LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC
Sbjct: 83  LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 142

Query: 172 LVKSEDCNNLSKRYKVL 189
           LVKSEDCNNLSKRYK L
Sbjct: 143 LVKSEDCNNLSKRYKTL 155

[Close]

BLAST of Carg16647 vs. NCBI nr
Match: XP_023549833.1 (tetraspanin-10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.9 bits (494), Expect = 7.0e-46
Identity = 105/137 (76.64%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 52  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIM 111
           L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIM
Sbjct: 23  LVIIFGIWMGTNH---DGCRKSLTLPVMGLGGFIFVV-SIVGFLGALKNNSILLWIYLIM 82

Query: 112 LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 171
           LC+TLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC
Sbjct: 83  LCVTLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 142

Query: 172 LVKSEDCNNLSKRYKVL 189
           LVKSEDCNNLSKRYK L
Sbjct: 143 LVKSEDCNNLSKRYKTL 155

[Close]

BLAST of Carg16647 vs. ExPASy Swiss-Prot
Match: F4I214 (Tetraspanin-10 OS=Arabidopsis thaliana OX=3702 GN=TET10 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.4e-34
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L 
Sbjct: 57  SIIGFLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLN 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL 189
           DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Sbjct: 117 DYSSWFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTI 155

[Close]

BLAST of Carg16647 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.5e-16
Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           +I G +G+    + LLW+YL ++ + ++ +   TV AF+VTN G+G ++ G  YKEY+L 
Sbjct: 57  AIAGLIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLG 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY 186
           DYSTW  K++ N  NW  +RSCLV+S+ C+ L  ++
Sbjct: 117 DYSTWLQKRVENGKNWNKIRSCLVESKVCSKLEAKF 152

[Close]

BLAST of Carg16647 vs. ExPASy Swiss-Prot
Match: Q9SUD4 (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-15
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           SI G +GA    S LLW+YL  + + ++    FT+ AF VTN G+G  ++   YKEY + 
Sbjct: 57  SIAGLVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVA 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY 186
           DYS W  K++NN  NW  +RSCL+ S+ C+    RY
Sbjct: 117 DYSNWLQKRVNNAKNWERIRSCLMYSDVCSTYRTRY 152

[Close]

BLAST of Carg16647 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14
Identity = 38/92 (41.30%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           +I G +G+    + LLW YL ++   ++ +L FT+ AF+VT+ GSG ++ G  YKEY+L+
Sbjct: 57  AIAGVVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLE 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNL 182
            YS W  +++NN  +W  +RSCL +S+ C NL
Sbjct: 117 AYSDWLQRRVNNAKHWNSIRSCLYESKFCYNL 148

[Close]

BLAST of Carg16647 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 32/96 (33.33%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           S+ GF GA   N  L+W+YL+++ + + A++ F + A+ VT+ GSG +V    Y +Y L+
Sbjct: 57  SLAGFAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLE 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY 186
           DYS W   ++++   W  + SCL  S  C  + + +
Sbjct: 117 DYSGWLKDRVSDDSYWGKISSCLRDSGACRKIGRNF 152

[Close]

BLAST of Carg16647 vs. ExPASy TrEMBL
Match: A0A6J1EQ67 (tetraspanin-10-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435620 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.4e-76
Identity = 148/188 (78.72%), Postives = 148/188 (78.72%), Query Frame = 0


Query: 1   MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVAL 60
           MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEE PFFLF IFCPFWPCLSLFLGVAL
Sbjct: 1   MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEETPFFLFFIFCPFWPCLSLFLGVAL 60

Query: 61  GIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAIL 120
           GIRRFKGRGAKWEWELASLSSDGSIFSPW                               
Sbjct: 61  GIRRFKGRGAKWEWELASLSSDGSIFSPW------------------------------- 120

Query: 121 VFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN 180
                 FIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN
Sbjct: 121 ------FIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNN 151

Query: 181 LSKRYKVL 189
           LSKRYK L
Sbjct: 181 LSKRYKTL 151

[Close]

BLAST of Carg16647 vs. ExPASy TrEMBL
Match: A0A6J1EL06 (tetraspanin-10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435620 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46
Identity = 106/137 (77.37%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 52  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIM 111
           L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIM
Sbjct: 23  LVIIFGIWMGTNH---DGCRKSLTLPVMGLGGFIFVV-SIVGFLGALKNNSILLWIYLIM 82

Query: 112 LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 171
           LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC
Sbjct: 83  LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 142

Query: 172 LVKSEDCNNLSKRYKVL 189
           LVKSEDCNNLSKRYK L
Sbjct: 143 LVKSEDCNNLSKRYKTL 155

[Close]

BLAST of Carg16647 vs. ExPASy TrEMBL
Match: A0A6J1I237 (tetraspanin-10-like OS=Cucurbita maxima OX=3661 GN=LOC111469139 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 104/137 (75.91%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 52  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIM 111
           L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIM
Sbjct: 23  LVIIFGIWMGTNH---DGCRKSLTLPVMGLGGFIFVV-SIVGFLGALKNNSILLWIYLIM 82

Query: 112 LCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 171
           LCITLVAI VFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC
Sbjct: 83  LCITLVAIFVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSC 142

Query: 172 LVKSEDCNNLSKRYKVL 189
           LVKSEDCNN SKRYK L
Sbjct: 143 LVKSEDCNNFSKRYKTL 155

[Close]

BLAST of Carg16647 vs. ExPASy TrEMBL
Match: A0A0A0KNY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154840 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 9.3e-44
Identity = 102/141 (72.34%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 48  FWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWI 107
           F   L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWI
Sbjct: 19  FLAILVIIFGIWMGTHH---DGCRKSLTLPVMGLGGFIFVV-SIVGFLGALKNNSILLWI 78

Query: 108 YLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMH 167
           YLIMLCITLV ILVFTVLAFIVTNNGSGH VAGLRYKEYQLQDYSTWFLKQLNNT+NWM 
Sbjct: 79  YLIMLCITLVGILVFTVLAFIVTNNGSGHDVAGLRYKEYQLQDYSTWFLKQLNNTENWMR 138

Query: 168 LRSCLVKSEDCNNLSKRYKVL 189
           L+SCLVKSEDCNNLSKRYK L
Sbjct: 139 LKSCLVKSEDCNNLSKRYKTL 155

[Close]

BLAST of Carg16647 vs. ExPASy TrEMBL
Match: A0A1S3ATI6 (tetraspanin-10 OS=Cucumis melo OX=3656 GN=LOC103482725 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 9.3e-44
Identity = 102/141 (72.34%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 48  FWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWI 107
           F   L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWI
Sbjct: 19  FLAILVIIFGIWMGTHH---DGCRKSLTLPVMGLGGFIFVV-SIVGFLGALKNNSILLWI 78

Query: 108 YLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMH 167
           YLIMLCITLV ILVFTVLAFIVTNNGSGH VAGLRYKEYQLQDYSTWFLKQLNNT+NWM 
Sbjct: 79  YLIMLCITLVGILVFTVLAFIVTNNGSGHDVAGLRYKEYQLQDYSTWFLKQLNNTENWMR 138

Query: 168 LRSCLVKSEDCNNLSKRYKVL 189
           L+SCLVKSEDCNNLSKRYK L
Sbjct: 139 LKSCLVKSEDCNNLSKRYKTL 155

[Close]

BLAST of Carg16647 vs. TAIR 10
Match: AT1G63260.2 (tetraspanin10 )

HSP 1 Score: 145.6 bits (366), Expect = 4.6e-35
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L 
Sbjct: 57  SIIGFLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLN 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL 189
           DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Sbjct: 117 DYSSWFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTI 155

[Close]

BLAST of Carg16647 vs. TAIR 10
Match: AT1G63260.1 (tetraspanin10 )

HSP 1 Score: 145.6 bits (366), Expect = 4.6e-35
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L 
Sbjct: 57  SIIGFLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLN 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL 189
           DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Sbjct: 117 DYSSWFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTI 155

[Close]

BLAST of Carg16647 vs. TAIR 10
Match: AT1G63260.3 (tetraspanin10 )

HSP 1 Score: 145.6 bits (366), Expect = 4.6e-35
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L 
Sbjct: 57  SIIGFLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLN 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL 189
           DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Sbjct: 117 DYSSWFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTI 155

[Close]

BLAST of Carg16647 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 86.7 bits (213), Expect = 2.5e-17
Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           +I G +G+    + LLW+YL ++ + ++ +   TV AF+VTN G+G ++ G  YKEY+L 
Sbjct: 57  AIAGLIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLG 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY 186
           DYSTW  K++ N  NW  +RSCLV+S+ C+ L  ++
Sbjct: 117 DYSTWLQKRVENGKNWNKIRSCLVESKVCSKLEAKF 152

[Close]

BLAST of Carg16647 vs. TAIR 10
Match: AT4G28050.1 (tetraspanin7 )

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-16
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 90  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQ 149
           SI G +GA    S LLW+YL  + + ++    FT+ AF VTN G+G  ++   YKEY + 
Sbjct: 57  SIAGLVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVA 116

Query: 150 DYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY 186
           DYS W  K++NN  NW  +RSCL+ S+ C+    RY
Sbjct: 117 DYSNWLQKRVNNAKNWERIRSCLMYSDVCSTYRTRY 152

The following BLAST results are available for this feature:

BLAST of Carg16647 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016957.1	3.2e-115	100.00	Tetraspanin-10 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022928823.1	5.0e-76	78.72	tetraspanin-10-like isoform X2 [Cucurbita moschata]	[more]
XP_022928822.1	5.4e-46	77.37	tetraspanin-10-like isoform X1 [Cucurbita moschata]	[more]
KAG6579494.1	5.4e-46	77.37	Tetraspanin-10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023549833.1	7.0e-46	76.64	tetraspanin-10-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I214	6.4e-34	72.73	Tetraspanin-10 OS=Arabidopsis thaliana OX=3702 GN=TET10 PE=2 SV=1	[more]
Q8S8Q6	3.5e-16	41.67	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9SUD4	5.1e-15	42.71	Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1	[more]
Q9M0B7	3.3e-14	41.30	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]
Q9M1E7	3.4e-11	33.33	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]

BLAST of Carg16647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQ67	2.4e-76	78.72	tetraspanin-10-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435620 PE=...	[more]
A0A6J1EL06	2.6e-46	77.37	tetraspanin-10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435620 PE=...	[more]
A0A6J1I237	2.2e-45	75.91	tetraspanin-10-like OS=Cucurbita maxima OX=3661 GN=LOC111469139 PE=3 SV=1	[more]
A0A0A0KNY7	9.3e-44	72.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154840 PE=3 SV=1	[more]
A0A1S3ATI6	9.3e-44	72.34	tetraspanin-10 OS=Cucumis melo OX=3656 GN=LOC103482725 PE=3 SV=1	[more]

BLAST of Carg16647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63260.2	4.6e-35	72.73	tetraspanin10	[more]
AT1G63260.1	4.6e-35	72.73	tetraspanin10	[more]
AT1G63260.3	4.6e-35	72.73	tetraspanin10	[more]
AT2G23810.1	2.5e-17	41.67	tetraspanin8	[more]
AT4G28050.1	3.6e-16	42.71	tetraspanin7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 80..173 e-value: 3.0E-12 score: 46.7
None	No IPR available	PANTHER	PTHR32191:SF22	TETRASPANIN-10	coord: 84..190
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 84..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16647-RA	Carg16647-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma