Carg16600 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16600
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	guanine nucleotide-binding protein subunit gamma 2-like
Location	Carg_Chr14: 12897689 .. 12898790 (+)
RNA-Seq Expression	Carg16600
Synteny	Carg16600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGGTTCCATTATTCAGATCCTTCTTTCCTTGATTTATGGGGTCCCCATGGAAATTTCTGGGTCTATCTTCTTTTCTTCTTTAATTCTCTCTTTTTCTCATTCATTCCTCTGTTTCTCTCTGCTACTACTAGAATCTTAGGGTTTTGGGTCTGAGTTGTTAAATTAGTCATGGCGGAGGCTGCTGTTCCCATTGCCCACCGGATTCAGTCGTTATCCGCTGTGGACGCCGTCGGAAAACATAGGTTGCTGGCGGAAATGAAGCGGCTCGAGCAAGAGGCTAGGTTTCTAGAGGTGGTGATTCTTTTTTACTTTTTGTTCTTTCTCTGTTCTGTTTTTACATGTTTGGTTGTTTCCAAGAACTTTTAATTTCAATTGAAGTAGGACATTAGTGAGATAATTTGATGGGTTGAGCTCAAAATGGTTGATTTTTGTTTCTGGGGAGGGGAGGATTTTGCTGGGACAATGATGAACAAACAAAGGAACAGAATGAAACTGGTAGTTCTCTGTTGCAGGAAGAGCTGGAGCAGCTGGAAAAATTGGAGAAGGCGTCGGCATCCTGTAAAGAGTAAGTTGAATTTGGCAATGAATTTTTCACTCTTTGTTCCATGAAAAATGCCAACTTTTTGAGGGCTTTGTTTATACACTGAATCTGAATATAATATAATACCAGGCTGTTGGGCTGTGTAGAAATGAGATCAGACCCTCTACTTCCAGAGTATGCTTCTTCTTACTCTATAAACATTTCCTGATTCATTTCCCATCTTTAAAATCATGATCTGATTCATTCTGGTTTGGTTTTTTGCCAGAACTCTTGCTCCAGTGAATCCAGCTTGGGATCGATGGTTCGAAGGCCCGAAAGACTCGAATCGATGCCAATGTCGATGCAGATGCTGGATTTTGTAACCATTCTGGTTTCCCCAGAGTGAATTTGAATTTGAAAGCTCTCATGAGAAGACGATGTTTGGCAAGCTCAAGATTCACCCGTTTCTCCTTAACAGAGCTTTCACATTACACATTAATGTTGGGTTTGCCAATTGGTATAGAATCCAAAAAGTACTTTCAGAATGAACATATGAAGTATTTAAAAATATTATTTTCT

mRNA sequence

TTTCGGTTCCATTATTCAGATCCTTCTTTCCTTGATTTATGGGGTCCCCATGGAAATTTCTGGGTCTATCTTCTTTTCTTCTTTAATTCTCTCTTTTTCTCATTCATTCCTCTGTTTCTCTCTGCTACTACTAGAATCTTAGGGTTTTGGGTCTGAGTTGTTAAATTAGTCATGGCGGAGGCTGCTGTTCCCATTGCCCACCGGATTCAGTCGTTATCCGCTGTGGACGCCGTCGGAAAACATAGGTTGCTGGCGGAAATGAAGCGGCTCGAGCAAGAGGCTAGGTTTCTAGAGGAAGAGCTGGAGCAGCTGGAAAAATTGGAGAAGGCGTCGGCATCCTGTAAAGAGCTGTTGGGCTGTGTAGAAATGAGATCAGACCCTCTACTTCCAGAAACTCTTGCTCCAGTGAATCCAGCTTGGGATCGATGGTTCGAAGGCCCGAAAGACTCGAATCGATGCCAATGTCGATGCAGATGCTGGATTTTGTAACCATTCTGGTTTCCCCAGAGTGAATTTGAATTTGAAAGCTCTCATGAGAAGACGATGTTTGGCAAGCTCAAGATTCACCCGTTTCTCCTTAACAGAGCTTTCACATTACACATTAATGTTGGGTTTGCCAATTGGTATAGAATCCAAAAAGTACTTTCAGAATGAACATATGAAGTATTTAAAAATATTATTTTCT

Coding sequence (CDS)

ATGGCGGAGGCTGCTGTTCCCATTGCCCACCGGATTCAGTCGTTATCCGCTGTGGACGCCGTCGGAAAACATAGGTTGCTGGCGGAAATGAAGCGGCTCGAGCAAGAGGCTAGGTTTCTAGAGGAAGAGCTGGAGCAGCTGGAAAAATTGGAGAAGGCGTCGGCATCCTGTAAAGAGCTGTTGGGCTGTGTAGAAATGAGATCAGACCCTCTACTTCCAGAAACTCTTGCTCCAGTGAATCCAGCTTGGGATCGATGGTTCGAAGGCCCGAAAGACTCGAATCGATGCCAATGTCGATGCAGATGCTGGATTTTGTAA

Protein sequence

MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL

Homology

[Close]

BLAST of Carg16600 vs. NCBI nr
Match: KAG6582340.1 (Guanine nucleotide-binding protein subunit gamma 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018752.1 Guanine nucleotide-binding protein subunit gamma 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 7.3e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL
Sbjct: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Carg16600 vs. NCBI nr
Match: XP_022924721.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 1.6e-51
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Carg16600 vs. NCBI nr
Match: XP_022980058.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima])

HSP 1 Score: 210.7 bits (535), Expect = 6.1e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPI HRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 1   MAEAAVPIPHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Carg16600 vs. NCBI nr
Match: XP_023527201.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 6.1e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRC CRCRCWIL
Sbjct: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCHCRCRCWIL 105

[Close]

BLAST of Carg16600 vs. NCBI nr
Match: XP_008438601.2 (PREDICTED: guanine nucleotide-binding protein subunit gamma 2 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 96/105 (91.43%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPI HRI SLSA+DAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 55  MAEAAVPIPHRILSLSALDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 114

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LG VEMRSDPLLPETL PVNP WD+WFEGPKDSNRC CRCRCWIL
Sbjct: 115 LGSVEMRSDPLLPETLGPVNPVWDQWFEGPKDSNRCHCRCRCWIL 159

[Close]

BLAST of Carg16600 vs. ExPASy Swiss-Prot
Match: Q93V47 (Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=3702 GN=GG2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-27
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 18 VDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETLA 77
          VD  GKHR+ AE+KRLEQEARFLEEELEQLEK++ ASASCKE L  V+ + DPLLPET  
Sbjct: 17 VDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLPETTG 76

Query: 78 PVNPAWDRWFEGPKDSNRCQC 99
          PVN  WD+WFEGPK++ RC C
Sbjct: 77 PVNATWDQWFEGPKEAKRCGC 97

[Close]

BLAST of Carg16600 vs. ExPASy Swiss-Prot
Match: B8AN27 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica OX=39946 GN=RGG1 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.1e-22
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 17  AVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETL 76
           A D  G+HR+ AE+K+LEQEARFLEEELE+L+K +K SA+ +EL+   E ++DPLLP T 
Sbjct: 9   AGDTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQELMVTAESKADPLLPVTT 68

Query: 77  APVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
            P   +WDRWFEGP+D      RC+CW L
Sbjct: 69  GPACQSWDRWFEGPQDLR----RCKCWFL 93

[Close]

BLAST of Carg16600 vs. ExPASy Swiss-Prot
Match: Q75WU1 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGG1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.1e-22
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 17  AVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETL 76
           A D  G+HR+ AE+K+LEQEARFLEEELE+L+K +K SA+ +EL+   E ++DPLLP T 
Sbjct: 9   AGDTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQELMVTAESKADPLLPVTT 68

Query: 77  APVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
            P   +WDRWFEGP+D      RC+CW L
Sbjct: 69  GPACQSWDRWFEGPQDLR----RCKCWFL 93

[Close]

BLAST of Carg16600 vs. ExPASy Swiss-Prot
Match: Q9FDX9 (Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=3702 GN=GG1 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.6e-17
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 22 GKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETLAPVNP 81
          GKHR+LAE+ R+EQE  FLE+EL+++E  +  S  C+ELL  +E   DPLLP T  P+N 
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 82 AWDRWFEGPKDSNRCQC 99
           WDRWFEGP     C+C
Sbjct: 79 GWDRWFEGPNGGEGCRC 95

[Close]

BLAST of Carg16600 vs. ExPASy Swiss-Prot
Match: A2X0N9 (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica OX=39946 GN=RGG2 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.8e-14
Identity = 37/80 (46.25%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 14  SLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLP 73
           ++ +V  VGKHRL A + RL+QE + L++EL +LE +E ASA+C+ ++   E +SDPLLP
Sbjct: 57  AMRSVGYVGKHRLSAAIARLDQELQSLQDELNELETMEPASAACQGVITSTEGKSDPLLP 116

Query: 74  ETLAPVNPAWDRWFEGPKDS 94
            T+ P N +W+RWF+  + S
Sbjct: 117 VTIGPENASWERWFQRVRSS 136

[Close]

BLAST of Carg16600 vs. ExPASy TrEMBL
Match: A0A6J1EA89 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432136 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 7.8e-52
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Carg16600 vs. ExPASy TrEMBL
Match: A0A6J1IY50 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479574 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.0e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPI HRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 1   MAEAAVPIPHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Carg16600 vs. ExPASy TrEMBL
Match: A0A1S3AXG2 (guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo OX=3656 GN=LOC103483662 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.8e-47
Identity = 96/105 (91.43%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPI HRI SLSA+DAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 55  MAEAAVPIPHRILSLSALDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 114

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LG VEMRSDPLLPETL PVNP WD+WFEGPKDSNRC CRCRCWIL
Sbjct: 115 LGSVEMRSDPLLPETLGPVNPVWDQWFEGPKDSNRCHCRCRCWIL 159

[Close]

BLAST of Carg16600 vs. ExPASy TrEMBL
Match: A0A5A7U729 (Guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00900 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46
Identity = 95/105 (90.48%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPI HR  SLSA+DAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KASASCKEL
Sbjct: 1   MAEAAVPIPHRTLSLSALDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LG VEMRSDPLLPETL PVNP WD+WFEGPKDSNRC CRCRCWIL
Sbjct: 61  LGSVEMRSDPLLPETLGPVNPVWDQWFEGPKDSNRCHCRCRCWIL 105

[Close]

BLAST of Carg16600 vs. ExPASy TrEMBL
Match: A0A0A0L7C3 (G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G144190 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46
Identity = 94/105 (89.52%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 1   MAEAAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKEL 60
           MAEAAVPI HRI SLSA+DAVGKHRLLAEMKRLEQEARFLEEELEQLEKL+KAS SCKEL
Sbjct: 1   MAEAAVPIPHRILSLSALDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASTSCKEL 60

Query: 61  LGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 106
           LG +EMRSDPLLPETL PVNP WDRWFEGPKDSNRC C+CRCWIL
Sbjct: 61  LGSIEMRSDPLLPETLGPVNPVWDRWFEGPKDSNRCHCQCRCWIL 105

[Close]

BLAST of Carg16600 vs. TAIR 10
Match: AT3G22942.1 (G-protein gamma subunit 2 )

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-28
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 18 VDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETLA 77
          VD  GKHR+ AE+KRLEQEARFLEEELEQLEK++ ASASCKE L  V+ + DPLLPET  
Sbjct: 17 VDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLPETTG 76

Query: 78 PVNPAWDRWFEGPKDSNRCQC 99
          PVN  WD+WFEGPK++ RC C
Sbjct: 77 PVNATWDQWFEGPKEAKRCGC 97

[Close]

BLAST of Carg16600 vs. TAIR 10
Match: AT3G63420.1 (Ggamma-subunit 1 )

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 22 GKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETLAPVNP 81
          GKHR+LAE+ R+EQE  FLE+EL+++E  +  S  C+ELL  +E   DPLLP T  P+N 
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 82 AWDRWFEGPKDSNRCQC 99
           WDRWFEGP     C+C
Sbjct: 79 GWDRWFEGPNGGEGCRC 95

[Close]

BLAST of Carg16600 vs. TAIR 10
Match: AT3G63420.2 (Ggamma-subunit 1 )

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 22 GKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLPETLAPVNP 81
          GKHR+LAE+ R+EQE  FLE+EL+++E  +  S  C+ELL  +E   DPLLP T  P+N 
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 82 AWDRWFEGPKDSNRCQC 99
           WDRWFEGP     C+C
Sbjct: 79 GWDRWFEGPNGGEGCRC 95

[Close]

BLAST of Carg16600 vs. TAIR 10
Match: AT5G20635.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 6.0e-04
Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 19  DAVGKHRLLAEMKRLEQEARFLEEELEQLEKLEKASASCKELLGCVEMRSDPLLP-ETLA 78
           D  GK R  A ++ LE+E  FLE E++ +E ++ AS   KE+   V   SDPL+P +  +
Sbjct: 43  DLYGKRREAARVQMLEREIGFLEGEIKFIEGVQPASRCIKEVSDFVVANSDPLIPAQRKS 102

Query: 79  PVNPAWDRWFEGPKDS-----NRCQCRCRC 103
             +  + +W  GP  S       CQ +C C
Sbjct: 103 RRSFRFWKWLCGPCLSLVSFCCCCQSKCSC 132

The following BLAST results are available for this feature:

BLAST of Carg16600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582340.1	7.3e-52	100.00	Guanine nucleotide-binding protein subunit gamma 2, partial [Cucurbita argyrospe...	[more]
XP_022924721.1	1.6e-51	99.05	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata]	[more]
XP_022980058.1	6.1e-51	98.10	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima]	[more]
XP_023527201.1	6.1e-51	98.10	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita pepo subsp. p...	[more]
XP_008438601.2	1.2e-46	91.43	PREDICTED: guanine nucleotide-binding protein subunit gamma 2 [Cucumis melo]	[more]

BLAST of Carg16600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93V47	2.9e-27	70.37	Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=37...	[more]
B8AN27	8.1e-22	56.18	Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica...	[more]
Q75WU1	8.1e-22	56.18	Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japoni...	[more]
Q9FDX9	1.6e-17	53.25	Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=37...	[more]
A2X0N9	4.8e-14	46.25	Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica...	[more]

BLAST of Carg16600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EA89	7.8e-52	99.05	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX...	[more]
A0A6J1IY50	3.0e-51	98.10	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3...	[more]
A0A1S3AXG2	5.8e-47	91.43	guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7U729	2.2e-46	90.48	Guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo var. makuwa O...	[more]
A0A0A0L7C3	2.2e-46	89.52	G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G14...	[more]

BLAST of Carg16600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22942.1	2.1e-28	70.37	G-protein gamma subunit 2	[more]
AT3G63420.1	1.1e-18	53.25	Ggamma-subunit 1	[more]
AT3G63420.2	1.1e-18	53.25	Ggamma-subunit 1	[more]
AT5G20635.1	6.0e-04	34.44	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..60
None	No IPR available	SMART	SM01224	G_gamma_2	coord: 27..105 e-value: 3.3E-10 score: 49.9
None	No IPR available	PANTHER	PTHR32378	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3	coord: 5..104
None	No IPR available	PANTHER	PTHR32378:SF12	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 2	coord: 5..104
IPR015898	G-protein gamma-like domain	PFAM	PF00631	G-gamma	coord: 29..105 e-value: 4.1E-13 score: 49.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16600-RA	Carg16600-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway