Carg16563 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16563
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor ERF098-like
Location	Carg_Chr14: 13046883 .. 13047332 (-)
RNA-Seq Expression	Carg16563
Synteny	Carg16563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATTCTCGTAAGGGTAAGGATCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGCCGTCGACCATGGGGTAAATACGCTGCCGAGATTCGAGACCCCTCAAAGAACGGAGCCAGACAATGGCTCGGCACGTACGACACCGCCGAGGATGCAGCTAGGGCTTATGATCGGATGGCATTTCACTTGAAAGGCCATCTTGCTAGCTTGAATTTCCCTGGTGAATATTATGCTCGTGTCATGGGTTCTCCTCCTCACCCTCCTCACGTCTTTCCTTCTTCTGCTCCCATCAACCGGGGTTTCGACACCGGAGACGCTGGATCCTCGTCTTCTAACCCTGATCCACACCAAGTTATCGTGCTCGAGTATCTGGACGGCCGAGTTTTGGATGACCTTCTTGCACAAGAGGAGAAAAAGAAGAAGAAGAACACCATATAA

mRNA sequence

ATGGAGGATTCTCGTAAGGGTAAGGATCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGCCGTCGACCATGGGGTAAATACGCTGCCGAGATTCGAGACCCCTCAAAGAACGGAGCCAGACAATGGCTCGGCACGTACGACACCGCCGAGGATGCAGCTAGGGCTTATGATCGGATGGCATTTCACTTGAAAGGCCATCTTGCTAGCTTGAATTTCCCTGGTGAATATTATGCTCGTGTCATGGGTTCTCCTCCTCACCCTCCTCACGTCTTTCCTTCTTCTGCTCCCATCAACCGGGGTTTCGACACCGGAGACGCTGGATCCTCGTCTTCTAACCCTGATCCACACCAAGTTATCGTGCTCGAGTATCTGGACGGCCGAGTTTTGGATGACCTTCTTGCACAAGAGGAGAAAAAGAAGAAGAAGAACACCATATAA

Coding sequence (CDS)

ATGGAGGATTCTCGTAAGGGTAAGGATCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGCCGTCGACCATGGGGTAAATACGCTGCCGAGATTCGAGACCCCTCAAAGAACGGAGCCAGACAATGGCTCGGCACGTACGACACCGCCGAGGATGCAGCTAGGGCTTATGATCGGATGGCATTTCACTTGAAAGGCCATCTTGCTAGCTTGAATTTCCCTGGTGAATATTATGCTCGTGTCATGGGTTCTCCTCCTCACCCTCCTCACGTCTTTCCTTCTTCTGCTCCCATCAACCGGGGTTTCGACACCGGAGACGCTGGATCCTCGTCTTCTAACCCTGATCCACACCAAGTTATCGTGCTCGAGTATCTGGACGGCCGAGTTTTGGATGACCTTCTTGCACAAGAGGAGAAAAAGAAGAAGAAGAACACCATATAA

Protein sequence

MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLLAQEEKKKKKNTI

Homology

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BLAST of Carg16563 vs. NCBI nr
Match: KAG7018789.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.4 bits (786), Expect = 6.9e-80
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 150
           QVIVLEYLDGRVLDDLLAQEEKKKKKNTI
Sbjct: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 149

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BLAST of Carg16563 vs. NCBI nr
Match: KAG6582380.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.3 bits (778), Expect = 5.8e-79
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRK KDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKPKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 150
           QVIVLEYLDGRVLDDLLAQEEKKKKKNTI
Sbjct: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 149

[Close]

BLAST of Carg16563 vs. NCBI nr
Match: XP_023526049.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 7.6e-79
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPH FPSSAPINRGFDTGDAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHFFPSSAPINRGFDTGDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 150
           QVIVLEYLDGRVLDDLLAQEEKKKKKN+I
Sbjct: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNSI 149

[Close]

BLAST of Carg16563 vs. NCBI nr
Match: XP_022980051.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 145/149 (97.32%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPH FPSSAPINRGFDTGDAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHFFPSSAPINRGFDTGDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 150
           QVIVLEYLD RVL+DLLAQEEKKKKKN+I
Sbjct: 121 QVIVLEYLDSRVLEDLLAQEEKKKKKNSI 149

[Close]

BLAST of Carg16563 vs. NCBI nr
Match: XP_022924699.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRK KDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKPKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDT DAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTEDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 150
           QVIVLEYLDGRVLDDLLAQEEKKKKKN+I
Sbjct: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNSI 149

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BLAST of Carg16563 vs. ExPASy Swiss-Prot
Match: Q9LTC5 (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.1e-35
Identity = 75/144 (52.08%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           ME S +  + Q Q D   ++RGVRRRPWGK+AAEIRDPS+NGAR WLGT++TAE+AARAY
Sbjct: 1   MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DR AF+L+GHLA LNFP EYY R+      PP+   SS+       +G   ++ S  +  
Sbjct: 61  DRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSS-----SSGSTSTNVSRQNQR 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKK 145
           +V   EYLD +VL++LL  EE+K+
Sbjct: 121 EVFEFEYLDDKVLEELLDSEERKR 139

[Close]

BLAST of Carg16563 vs. ExPASy Swiss-Prot
Match: Q9LTC6 (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 65/130 (50.00%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 18  IKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFP 77
           +KYRGVR+RPWGKYAAEIRD +++GAR WLGT++TAEDAARAYDR AF ++G  A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 78  GEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLL 137
            EY     G      +   SS+   RG   GD        D  +VI  EYLD  +L++LL
Sbjct: 72  HEYQMMKDGPNGSHENAVASSSSGYRGGGGGD--------DGREVIEFEYLDDSLLEELL 131

Query: 138 AQEEKKKKKN 148
              E+  + N
Sbjct: 132 DYGERSNQDN 133

[Close]

BLAST of Carg16563 vs. ExPASy Swiss-Prot
Match: Q9LSX0 (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25
Identity = 71/138 (51.45%), Postives = 86/138 (62.32%), Query Frame = 0


Query: 13  QGDDGI-----KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHL 72
           QG  G+     KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAE+AARAYD+ A+ +
Sbjct: 3   QGGRGVGAEHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSM 62

Query: 73  KGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEY 132
           +G  A LNFP EY    MGS         SS+    G  +  A +SSS+    QV   EY
Sbjct: 63  RGQAAILNFPHEYN---MGSG-------VSSSTAMAGSSSASASASSSS---RQVFEFEY 122

Query: 133 LDGRVLDDLLAQEEKKKK 146
           LD  VL++LL + EK  K
Sbjct: 123 LDDSVLEELLEEGEKPNK 127

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BLAST of Carg16563 vs. ExPASy Swiss-Prot
Match: P93822 (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.0e-25
Identity = 69/131 (52.67%), Postives = 79/131 (60.31%), Query Frame = 0


Query: 19  KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFPG 78
           KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAEDAARAYDR A+ ++G  A LNFP 
Sbjct: 19  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78

Query: 79  EYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLLA 138
           EY    MG+                G  +  A SSSS+    QV   EYLD  VLD+LL 
Sbjct: 79  EYN---MGT----------------GSSSTAANSSSSS---QQVFEFEYLDDSVLDELLE 127

Query: 139 QEEKKKKKNTI 150
             E   K + I
Sbjct: 139 YGENYNKTHNI 127

[Close]

BLAST of Carg16563 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 17  GIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNF 76
           G++YRGVRRRPWGK+AAEIRDP KNGAR WLGTY+T EDAA AYDR AF L+G  A LNF
Sbjct: 89  GMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNF 148

Query: 77  P 78
           P
Sbjct: 149 P 149

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BLAST of Carg16563 vs. ExPASy TrEMBL
Match: A0A6J1ISH5 (ethylene-responsive transcription factor ERF098-like OS=Cucurbita maxima OX=3661 GN=LOC111479567 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.3e-78
Identity = 145/149 (97.32%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPH FPSSAPINRGFDTGDAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHFFPSSAPINRGFDTGDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 150
           QVIVLEYLD RVL+DLLAQEEKKKKKN+I
Sbjct: 121 QVIVLEYLDSRVLEDLLAQEEKKKKKNSI 149

[Close]

BLAST of Carg16563 vs. ExPASy TrEMBL
Match: A0A6J1E9Y3 (ethylene-responsive transcription factor ERF098-like OS=Cucurbita moschata OX=3662 GN=LOC111432122 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-78
Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MEDSRK KDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY
Sbjct: 1   MEDSRKPKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDT DAGSSSSNPDPH
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTEDAGSSSSNPDPH 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNTI 150
           QVIVLEYLDGRVLDDLLAQEEKKKKKN+I
Sbjct: 121 QVIVLEYLDGRVLDDLLAQEEKKKKKNSI 149

[Close]

BLAST of Carg16563 vs. ExPASy TrEMBL
Match: A0A1S3AX97 (ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=LOC103483600 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.7e-63
Identity = 123/150 (82.00%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED+RKGK+QQK GDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAEDAARAY
Sbjct: 1   MEDTRKGKEQQKHGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTG--DAGSSSSNPD 120
           D+ AF LKGHLASLNFP EYYARVMGSPPHPPH+FP S PIN GF++G    GSS+SN D
Sbjct: 61  DQRAFQLKGHLASLNFPSEYYARVMGSPPHPPHLFP-SVPINSGFESGGVGGGSSTSNVD 120

Query: 121 PHQVIVLEYLDGRVLDDLLAQEEKKKKKNT 149
           P +VIV EY+DGRVL+DLLAQE+KKKKKN+
Sbjct: 121 PQKVIVFEYVDGRVLEDLLAQEDKKKKKNS 149

[Close]

BLAST of Carg16563 vs. ExPASy TrEMBL
Match: A0A5D3D3D4 (Ethylene-responsive transcription factor ERF098-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001530 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62
Identity = 122/150 (81.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED+RKGK+QQK GDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAEDAARAY
Sbjct: 1   MEDTRKGKEQQKHGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTG--DAGSSSSNPD 120
           D+ AF LKGHLASLNFP EYYARVMGSPPHPPH+FP S PIN GF++     GSS+SN D
Sbjct: 61  DQRAFQLKGHLASLNFPSEYYARVMGSPPHPPHLFP-SVPINSGFESSGVGGGSSTSNVD 120

Query: 121 PHQVIVLEYLDGRVLDDLLAQEEKKKKKNT 149
           P +VIV EY+DGRVL+DLLAQE+KKKKKN+
Sbjct: 121 PQKVIVFEYVDGRVLEDLLAQEDKKKKKNS 149

[Close]

BLAST of Carg16563 vs. ExPASy TrEMBL
Match: A0A0A0L4F1 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135620 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 109/133 (81.95%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           MED RKGK+QQK GDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAEDAARAY
Sbjct: 1   MEDHRKGKEQQKHGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTG--DAGSSSSNPD 120
           D+ AF LKGHLASLNFP EYYARVMGSPPHPP++F SS  IN GFD+G    GSS+SN D
Sbjct: 61  DQRAFQLKGHLASLNFPSEYYARVMGSPPHPPNLF-SSTSINSGFDSGGVGGGSSTSNID 120

Query: 121 PHQVIVLEYLDGR 132
           PH+VIV EY+DGR
Sbjct: 121 PHKVIVFEYVDGR 132

[Close]

BLAST of Carg16563 vs. TAIR 10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 6.5e-36
Identity = 75/144 (52.08%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60
           ME S +  + Q Q D   ++RGVRRRPWGK+AAEIRDPS+NGAR WLGT++TAE+AARAY
Sbjct: 1   MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAY 60

Query: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPH 120
           DR AF+L+GHLA LNFP EYY R+      PP+   SS+       +G   ++ S  +  
Sbjct: 61  DRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSS-----SSGSTSTNVSRQNQR 120

Query: 121 QVIVLEYLDGRVLDDLLAQEEKKK 145
           +V   EYLD +VL++LL  EE+K+
Sbjct: 121 EVFEFEYLDDKVLEELLDSEERKR 139

[Close]

BLAST of Carg16563 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.4e-27
Identity = 65/130 (50.00%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 18  IKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFP 77
           +KYRGVR+RPWGKYAAEIRD +++GAR WLGT++TAEDAARAYDR AF ++G  A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 78  GEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLL 137
            EY     G      +   SS+   RG   GD        D  +VI  EYLD  +L++LL
Sbjct: 72  HEYQMMKDGPNGSHENAVASSSSGYRGGGGGD--------DGREVIEFEYLDDSLLEELL 131

Query: 138 AQEEKKKKKN 148
              E+  + N
Sbjct: 132 DYGERSNQDN 133

[Close]

BLAST of Carg16563 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 71/138 (51.45%), Postives = 86/138 (62.32%), Query Frame = 0


Query: 13  QGDDGI-----KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHL 72
           QG  G+     KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAE+AARAYD+ A+ +
Sbjct: 3   QGGRGVGAEHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSM 62

Query: 73  KGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEY 132
           +G  A LNFP EY    MGS         SS+    G  +  A +SSS+    QV   EY
Sbjct: 63  RGQAAILNFPHEYN---MGSG-------VSSSTAMAGSSSASASASSSS---RQVFEFEY 122

Query: 133 LDGRVLDDLLAQEEKKKK 146
           LD  VL++LL + EK  K
Sbjct: 123 LDDSVLEELLEEGEKPNK 127

[Close]

BLAST of Carg16563 vs. TAIR 10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14 )

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-26
Identity = 69/131 (52.67%), Postives = 79/131 (60.31%), Query Frame = 0


Query: 19  KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNFPG 78
           KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAEDAARAYDR A+ ++G  A LNFP 
Sbjct: 19  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78

Query: 79  EYYARVMGSPPHPPHVFPSSAPINRGFDTGDAGSSSSNPDPHQVIVLEYLDGRVLDDLLA 138
           EY    MG+                G  +  A SSSS+    QV   EYLD  VLD+LL 
Sbjct: 79  EYN---MGT----------------GSSSTAANSSSSS---QQVFEFEYLDDSVLDELLE 127

Query: 139 QEEKKKKKNTI 150
             E   K + I
Sbjct: 139 YGENYNKTHNI 127

[Close]

BLAST of Carg16563 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 17  GIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAYDRMAFHLKGHLASLNF 76
           G++YRGVRRRPWGK+AAEIRDP KNGAR WLGTY+T EDAA AYDR AF L+G  A LNF
Sbjct: 89  GMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNF 148

Query: 77  P 78
           P
Sbjct: 149 P 149

The following BLAST results are available for this feature:

BLAST of Carg16563 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018789.1	6.9e-80	100.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG6582380.1	5.8e-79	99.33	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023526049.1	7.6e-79	98.66	ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo...	[more]
XP_022980051.1	1.1e-77	97.32	ethylene-responsive transcription factor ERF098-like [Cucurbita maxima]	[more]
XP_022924699.1	1.4e-77	97.99	ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]	[more]

BLAST of Carg16563 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTC5	9.1e-35	52.08	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LTC6	1.3e-25	50.00	Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LSX0	1.7e-25	51.45	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93822	5.0e-25	52.67	Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8L9K1	2.6e-21	77.05	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]

BLAST of Carg16563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ISH5	5.3e-78	97.32	ethylene-responsive transcription factor ERF098-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E9Y3	6.9e-78	97.99	ethylene-responsive transcription factor ERF098-like OS=Cucurbita moschata OX=36...	[more]
A0A1S3AX97	3.7e-63	82.00	ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3D3D4	1.8e-62	81.33	Ethylene-responsive transcription factor ERF098-like protein OS=Cucumis melo var...	[more]
A0A0A0L4F1	3.1e-54	81.95	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135620 PE=...	[more]

BLAST of Carg16563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23230.1	6.5e-36	52.08	Integrase-type DNA-binding superfamily protein	[more]
AT3G23220.1	9.4e-27	50.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G43410.1	1.2e-26	51.45	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	3.6e-26	52.67	Ethylene-responsive element binding factor 14	[more]
AT2G44840.1	1.8e-22	77.05	ethylene-responsive element binding factor 13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 43..59 score: 65.67 coord: 20..31 score: 71.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 19..83 e-value: 1.7E-32 score: 123.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 19..70 e-value: 2.5E-14 score: 53.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 19..77 score: 23.327345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 19..77 e-value: 2.15657E-29 score: 100.039
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 18..78 e-value: 3.4E-27 score: 96.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31190:SF303	ETHYLENE RESPONSE FACTOR	coord: 1..141
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 1..141
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 19..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16563-RA	Carg16563-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity