Carg16530 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGAGGGCGGACGTCGACGGCACCTTCCAGAAATGTCATGGTGGTGGTAGATCCAGCTCGGGAGTCCGCCGCTGCGCTCCAGTATACGCTTTCTCATGCTCTCGTTCAGAACGACGAGCTCATTCTCCTCCATGTCGATAATCCTAATTCTTGGAAGAACGCCATTTCGACTTTCCTCAAGAGGCCGAATGAAAAATCCGCCAATGCTCATGCTTCTGCCATTGTCCCTGCCACTGCCACTGCCACTGCCACTGCCACTGCCACCGCCACCGCCACCGCCACCGCCACCGCAGCAGCCGCCGCCGCTTTCGGCTTCCAAGGAGGACCACAAGTGGAGGTTGATTTTCTTGAGGAGATGAAGAAAGCCTGCAAGATTGCTAATCCCAATCTTAAAGTGCGGACGGTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAATGCTCTCGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCGATCTTAGGGTTTGTCTTCTTCCCTTCATCATAATTGTCAATTTTAGCTTCCCATTTTCGTCCATTCATCATTTCCATTGATTCTCGAGCTTTCCGTACAATTATCATAGCTCCTAAACTGAGATTGCCTTAATAAATGAATGAGATGCTTCTGAATATGTATGATCATGCATCCAAAATCAAGAAGATTAGAGAGTTTTTGTTTTCATTTGTTGTGAATTCATTAAACGCAGTTATAAACGGGCTGGAGGGCCAATGAAAGCGGCAAAAATGTTGGACACAGCAGAGTATTTGGTTGAGAACAGCAAGTGCACTTGTGTTGCTGTACAAAAGAAAGGTCAAAATGCAGGCTATCTCTTGAACACCAAAACCCAAAGAAACTTCTGGCTCTTGGCTTGATATCATAATATCAACTCCCTTCACCATTTTCCATTCTCCTCAATCCACCATTGTTTTCAAATTCATCACTCCCTCTCCTCACCCTTTCTCTTGTTTCAAAATCAAACTCATTGGCTTTCTCTTTGGCTCTCCTTCCCCGTTTGAGATCAATTTCAAGTTGATTCATTCATCATCTCCAGGCTTGGTTTGGATTGGACACCCTCTACCTTCTTTCTTTCCAGGCAGTGATTCAACAAAATCATTTGTACATAACTTTTGGACCCACAGAAATTAACCAGCTGAAAATGAGTTAACCCCACTCTCCTTTTTCTGTAATGCTTTCCTTTTATCTTTTGCTTCAAAGAATTCATTTGTTAACCATGTTCTTGTTGAGCCATCTGGTTTTATCTTTGAAATTGTAATTCTGTTCGACGTGGTGAAATCAGTACTCTTTTCTTAAGGGCTAAGCTAGAAAAGTGTTCTAAAGCCCACCTTAGCCACCTCTGATTTCACAAATCCAAAACCCAGCTGTGAAATGTTTAGATCCACCAATACCCAGTCAACTAGTAAGAACTATCCAAATGGAACAGGAAAGTGTAAAACCCAACTACCATAGCATCCACTCTCATCTGGTAGCAAAAAATGCCTCCATCTGTTCCTTATGGCTCAAAATACCAGGAAGCTTCATGGCAAGAAGGTATCTACTTCATCACTCATTGAAGTTTATGATTCATGCCAAAACCGACTCATTTAGACGAGTTGAAGAAAAAAAAAAATTGAAAATGAAGTAAAAAGCTCTATTTCTTTGTTTCGTTATTGTATAAAATTGTTCTTATCCATATTGAAATAAATGAA ATGGGAGGAGGGCGGACGTCGACGGCACCTTCCAGAAATGTCATGGTGGTGGTAGATCCAGCTCGGGAGTCCGCCGCTGCGCTCCAGTATACGCTTTCTCATGCTCTCGTTCAGAACGACGAGCTCATTCTCCTCCATGTCGATAATCCTAATTCTTGGAAGAACGCCATTTCGACTTTCCTCAAGAGGCCGAATGAAAAATCCGCCAATGCTCATGCTTCTGCCATTGTCCCTGCCACTGCCACTGCCACTGCCACTGCCACTGCCACCGCCACCGCCACCGCCACCGCCACCGCAGCAGCCGCCGCCGCTTTCGGCTTCCAAGGAGGACCACAAGTGGAGGTTGATTTTCTTGAGGAGATGAAGAAAGCCTGCAAGATTGCTAATCCCAATCTTAAAGTGCGGACGGTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAATGCTCTCGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCGATCTTAGGTTATAAACGGGCTGGAGGGCCAATGAAAGCGGCAAAAATGTTGGACACAGCAGAGTATTTGGTTGAGAACAGCAAGTGCACTTGTGTTGCTGTACAAAAGAAAGGTCAAAATGCAGGCTATCTCTTGAACACCAAAACCCAAAGAAACTTCTGGCTCTTGGCTTGATATCATAATATCAACTCCCTTCACCATTTTCCATTCTCCTCAATCCACCATTGTTTTCAAATTCATCACTCCCTCTCCTCACCCTTTCTCTTGTTTCAAAATCAAACTCATTGGCTTTCTCTTTGGCTCTCCTTCCCCGTTTGAGATCAATTTCAAGTTGATTCATTCATCATCTCCAGGCTTGGTTTGGATTGGACACCCTCTACCTTCTTTCTTTCCAGGCAGTGATTCAACAAAATCATTTGTACATAACTTTTGGACCCACAGAAATTAACCAGCTGAAAATGAGTTAACCCCACTCTCCTTTTTCTGTAATGCTTTCCTTTTATCTTTTGCTTCAAAGAATTCATTTGTTAACCATGTTCTTGTTGAGCCATCTGGTTTTATCTTTGAAATTGTAATTCTGTTCGACGTGGTGAAATCAGTACTCTTTTCTTAAGGGCTAAGCTAGAAAAGTGTTCTAAAGCCCACCTTAGCCACCTCTGATTTCACAAATCCAAAACCCAGCTGTGAAATGTTTAGATCCACCAATACCCAGTCAACTAGTAAGAACTATCCAAATGGAACAGGAAAGTGTAAAACCCAACTACCATAGCATCCACTCTCATCTGGTAGCAAAAAATGCCTCCATCTGTTCCTTATGGCTCAAAATACCAGGAAGCTTCATGGCAAGAAGGTATCTACTTCATCACTCATTGAAGTTTATGATTCATGCCAAAACCGACTCATTTAGACGAGTTGAAGAAAAAAAAAAATTGAAAATGAAGTAAAAAGCTCTATTTCTTTGTTTCGTTATTGTATAAAATTGTTCTTATCCATATTGAAATAAATGAA ATGGGAGGAGGGCGGACGTCGACGGCACCTTCCAGAAATGTCATGGTGGTGGTAGATCCAGCTCGGGAGTCCGCCGCTGCGCTCCAGTATACGCTTTCTCATGCTCTCGTTCAGAACGACGAGCTCATTCTCCTCCATGTCGATAATCCTAATTCTTGGAAGAACGCCATTTCGACTTTCCTCAAGAGGCCGAATGAAAAATCCGCCAATGCTCATGCTTCTGCCATTGTCCCTGCCACTGCCACTGCCACTGCCACTGCCACTGCCACCGCCACCGCCACCGCCACCGCCACCGCAGCAGCCGCCGCCGCTTTCGGCTTCCAAGGAGGACCACAAGTGGAGGTTGATTTTCTTGAGGAGATGAAGAAAGCCTGCAAGATTGCTAATCCCAATCTTAAAGTGCGGACGGTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAATGCTCTCGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCGATCTTAGGTTATAAACGGGCTGGAGGGCCAATGAAAGCGGCAAAAATGTTGGACACAGCAGAGTATTTGGTTGAGAACAGCAAGTGCACTTGTGTTGCTGTACAAAAGAAAGGTCAAAATGCAGGCTATCTCTTGAACACCAAAACCCAAAGAAACTTCTGGCTCTTGGCTTGA MGGGRTSTAPSRNVMVVVDPARESAAALQYTLSHALVQNDELILLHVDNPNSWKNAISTFLKRPNEKSANAHASAIVPATATATATATATATATATATAAAAAAFGFQGGPQVEVDFLEEMKKACKIANPNLKVRTVRVELEGKDKASMIMAQTNALGVDLLVIGQRRSLSTAILGYKRAGGPMKAAKMLDTAEYLVENSKCTCVAVQKKGQNAGYLLNTKTQRNFWLLA Homology
BLAST of Carg16530 vs. NCBI nr
Match: KAG7018822.1 (hypothetical protein SDJN02_20695, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 428.3 bits (1100), Expect = 4.1e-116 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg16530 vs. NCBI nr
Match: KAG6582424.1 (hypothetical protein SDJN03_22426, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113 Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0
BLAST of Carg16530 vs. NCBI nr
Match: XP_022924561.1 (uncharacterized protein LOC111432005 [Cucurbita moschata]) HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112 Identity = 225/230 (97.83%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of Carg16530 vs. NCBI nr
Match: XP_023527285.1 (uncharacterized protein LOC111790565 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.9 bits (1047), Expect = 5.7e-110 Identity = 220/230 (95.65%), Postives = 221/230 (96.09%), Query Frame = 0
BLAST of Carg16530 vs. NCBI nr
Match: XP_022980405.1 (uncharacterized protein LOC111479780 [Cucurbita maxima]) HSP 1 Score: 404.8 bits (1039), Expect = 4.9e-109 Identity = 217/230 (94.35%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of Carg16530 vs. ExPASy TrEMBL
Match: A0A6J1E9S8 (uncharacterized protein LOC111432005 OS=Cucurbita moschata OX=3662 GN=LOC111432005 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 6.0e-113 Identity = 225/230 (97.83%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of Carg16530 vs. ExPASy TrEMBL
Match: A0A6J1IW69 (uncharacterized protein LOC111479780 OS=Cucurbita maxima OX=3661 GN=LOC111479780 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109 Identity = 217/230 (94.35%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of Carg16530 vs. ExPASy TrEMBL
Match: A0A0A0L6Y4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134530 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 1.2e-81 Identity = 172/231 (74.46%), Postives = 187/231 (80.95%), Query Frame = 0
BLAST of Carg16530 vs. ExPASy TrEMBL
Match: A0A5A7U1M3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002120 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.6e-81 Identity = 169/231 (73.16%), Postives = 187/231 (80.95%), Query Frame = 0
BLAST of Carg16530 vs. ExPASy TrEMBL
Match: A0A1S3AWE0 (uncharacterized protein LOC103483538 OS=Cucumis melo OX=3656 GN=LOC103483538 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.6e-81 Identity = 169/231 (73.16%), Postives = 187/231 (80.95%), Query Frame = 0
BLAST of Carg16530 vs. TAIR 10
Match: AT4G13450.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 206.5 bits (524), Expect = 2.4e-53 Identity = 115/228 (50.44%), Postives = 163/228 (71.49%), Query Frame = 0
BLAST of Carg16530 vs. TAIR 10
Match: AT4G13450.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29 Identity = 79/175 (45.14%), Postives = 119/175 (68.00%), Query Frame = 0
BLAST of Carg16530 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 79.0 bits (193), Expect = 5.7e-15 Identity = 60/217 (27.65%), Postives = 92/217 (42.40%), Query Frame = 0
BLAST of Carg16530 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-12 Identity = 63/223 (28.25%), Postives = 93/223 (41.70%), Query Frame = 0
BLAST of Carg16530 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12 Identity = 59/225 (26.22%), Postives = 90/225 (40.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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