Carg16522 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16522
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description7-hydroxymethyl chlorophyll a reductase, chloroplastic
LocationCarg_Chr14: 13272522 .. 13274860 (-)
RNA-Seq ExpressionCarg16522
SyntenyCarg16522
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGGATTAGTGGAACAGTACTTGGAAATTACACCAACAATTAGCGAGGTAAATTTCTTGCCTTCCTATATCTTCTTTATTAAGTAAGCATTGCATATATAAACAAGAAAATTATTCTGGGCTCAGGGTAATCGAAGACCTTTAGTTATGGAGACTGTGAAGGCAGATGACGATGCTAAGCTGGGTATGTATGGCTACATCCTTACAATCTCTCAAACTTAAGTTCTAATTTCGTACTCTAATTTGTTTATTATCCAGACTTACTTTAAAATCAATTTTCATTCAAATGTTATTGTGTTGTAGTGTACTGTCTAATCTATTTGGAGCAATCCGTTTTGCTATTATATTAATAATTTATCCTCCTGTAATGGGCTCAAGAACTTCCCAGTCCCTAATTATTTTCATTTCGGAGATAGTCAGATTATGTTCCTTGTCATTTCTTTAAAATCATGGAAAAGCAGAATTTCCTAGCTTTGTTCTGAACGCTCCATATAGTACCTGCTTTTCTCTGTAATTGCTAATGAGCGTGCTGGTTAGAATTTCTTCTTTAACTACGAGTCATGGCAGGCTTCTATGACCTTTGATTTATATACTTGCGTTCTTACTCTCAGGGAAAGGTCCGTCACAGCCTGCTCCAAAATTTATTGGGAACATCATTGCGTTTTTTCTGAACTTGGTAAAATTTCCCCTTGATATATACATTCCTTTTTCTGAAAAAATAAACTACCAATTTTCAGAAATGTAAGTATTCATCGATCTATGATGCACTTACAATAAAGTATATGCAGAAACTTCATTATCTTGTTTTTTTTCTTTAGATTGGCCCTAAAGGTCTGGAATTTGCTCGTTATTCACTGGATTACCATACCATCCGGAACCATTTATATGTCACCCGAAAATGGGGAAAACAAAGGTAAAAAACGGATTAAGCCGTGTGTGAAGGACTCGTTTAATTTTGTTTCCTTGTCCTCTTTTTGATGATGATTTATGGACTGCAGAGCTGATAAGCACGAACCTACATATGCTAAAAAGTTAGTGGATTTGTACAACCAGAAGGGTGAAATTGATCGCATACTTTCCAACTCAAAGTAATCACACTGTTCAGAGACAGATGGCACTTGCACTTATATTACTGGTTTTCTTGCTTTTGGTTGCACAAAATCAGAAGTCACAAACGGATCATGGAAAACTGTCGTGGAACTTCAAGATTCTTGCTGTGAAATCTTGGTTCCACTACTTTTCTCTCATTTCAATCCCTGATCATCCACCTCTTTCTATGGGCTGTTTGTTGAATCTCATTCGACTGTAAGAGACTAAAAGTTTGTCTCAACTCATTTAGTTAGAAGTAGTTTTTTCAGGATTAGGCAACTAAATGTAGTAATGAGCGTTTGCACCAATTTCAATGCAATGTTTTGGAAGATGAAGAACTTTCTTCTTAAAGAATTTCATTTTGATAGCGTAATGCAACTTTTTTGGAAGATGATTGTCATTATACTAAATGAGAAATAAACTAAAAGGTTAGGAGTTGGGATGAAAATTTAAAAGGGTTTAAGGGAGAAAACATGGGAGGAAAATATTCTCCAATAATTCATTATTAGCACTCTATCCATTTCATTTAAAAGGGTTCAATTCACAATAAATGAGAAACTTAATAAAATTAATGGAACCTTAAGGTATATGAAGAAAATACCATGGTTTCTAAACCGTGCGAGTATTTCCTTGGACTCCTGAATTTGTACTGGTAGTTGTAAATTTTTCACTTACCATCATAATCTCAACTGTGTTTATTTATCATTTATAACATGAATAGATGGCTTTTGATGAAGAACTAGGAAACTGTTATGGGTATTTACTACCCCATGTGTTTTCTTCCCTTTGATGTCTCTGTCAGAGGTCGCATGGTTGGTGTGAGAACATTGGAAACTCTAGTGGGATTTTGACAAAGACTGCAGGTTTGGATTTTCATGCTGTAGGCTTCATGTGTTGCTATAAACTAGAACATTAATGTCTACTTGACTGACCTATGTTCCAAACTGATGCAGGTAACATGTCATGAAGGACCATGATCAGGTCGAATTACAAATTCATTCTGCAAAGTTTTGAGTTTGTGATGCTGAAGAAGAACATTTAAATGGGCCACGGAGTTATAGCACGATGTTCGGTTGCACCAACAGCATGGGGAGTCATATGGGTTGTCTTCTCCATTACCCTCCTCACAGGTGAATTGTCTTGTCCTTGTTCTTTGTAACAGCTCAAGCCCACCGCTAACAAATATTGTCCTCTTTGAACTTCCCCTTTCGGGTTTCCCTTCAAAGTTTTTAAAACGCGTCTTATAA

mRNA sequence

ATGCTGGGATTAGTGGAACAGTACTTGGAAATTACACCAACAATTAGCGAGGGTAATCGAAGACCTTTAGTTATGGAGACTGTGAAGGCAGATGACGATGCTAAGCTGGGGAAAGGTCCGTCACAGCCTGCTCCAAAATTTATTGGGAACATCATTGCGTTTTTTCTGAACTTGATTGGCCCTAAAGGTCTGGAATTTGCTCGTTATTCACTGGATTACCATACCATCCGGAACCATTTATATGTCACCCGAAAATGGGGAAAACAAAGAGCTGATAAGCACGAACCTACATATGCTAAAAAGTTAGTGGATTTGTACAACCAGAAGGGTGAAATTGATCGCATACTTTCCAACTCAAAGTAATCACACTGTTCAGAGACAGATGGCACTTGCACTTATATTACTGGTTTTCTTGCTTTTGGTTGCACAAAATCAGAAGTCACAAACGGATCATGGAAAACTGTCGTGGAACTTCAAGATTCTTGCTGTGAAATCTTGGTTCCACTACTTTTCTCTCATTTCAATCCCTGATCATCCACCTCTTTCTATGGGCTGTTTGTTGAATCTCATTCGACTGTAAGAGACTAAAAGTTTGTCTCAACTCATTTAGTTAGAAGTAGTTTTTTCAGGATTAGGCAACTAAATGTAGTAATGAGCGTTTGCACCAATTTCAATGCAATGTTTTGGAAGATGAAGAACTTTCTTCTTAAAGAATTTCATTTTGATAGCGTAATGCAACTTTTTTGGAAGATGATTGTCATTATACTAAATGAGAAATAAACTAAAAGGTTAGGAGTTGGGATGAAAATTTAAAAGGGTTTAAGGGAGAAAACATGGGAGGAAAATATTCTCCAATAATTCATTATTAGCACTCTATCCATTTCATTTAAAAGGGTTCAATTCACAATAAATGAGAAACTTAATAAAATTAATGGAACCTTAAGGTATATGAAGAAAATACCATGGTTTCTAAACCGTGCGAGTATTTCCTTGGACTCCTGAATTTGTACTGGTAGTTGTAAATTTTTCACTTACCATCATAATCTCAACTGTGTTTATTTATCATTTATAACATGAATAGATGGCTTTTGATGAAGAACTAGGAAACTGTTATGGGTATTTACTACCCCATGTGTTTTCTTCCCTTTGATGTCTCTGTCAGAGGTCGCATGGTTGGTGTGAGAACATTGGAAACTCTAGTGGGATTTTGACAAAGACTGCAGGTAACATGTCATGAAGGACCATGATCAGGTCGAATTACAAATTCATTCTGCAAAGTTTTGAGTTTGTGATGCTGAAGAAGAACATTTAAATGGGCCACGGAGTTATAGCACGATGTTCGGTTGCACCAACAGCATGGGGAGTCATATGGGTTGTCTTCTCCATTACCCTCCTCACAGGTGAATTGTCTTGTCCTTGTTCTTTGTAACAGCTCAAGCCCACCGCTAACAAATATTGTCCTCTTTGAACTTCCCCTTTCGGGTTTCCCTTCAAAGTTTTTAAAACGCGTCTTATAA

Coding sequence (CDS)

ATGCTGGGATTAGTGGAACAGTACTTGGAAATTACACCAACAATTAGCGAGGGTAATCGAAGACCTTTAGTTATGGAGACTGTGAAGGCAGATGACGATGCTAAGCTGGGGAAAGGTCCGTCACAGCCTGCTCCAAAATTTATTGGGAACATCATTGCGTTTTTTCTGAACTTGATTGGCCCTAAAGGTCTGGAATTTGCTCGTTATTCACTGGATTACCATACCATCCGGAACCATTTATATGTCACCCGAAAATGGGGAAAACAAAGAGCTGATAAGCACGAACCTACATATGCTAAAAAGTTAGTGGATTTGTACAACCAGAAGGGTGAAATTGATCGCATACTTTCCAACTCAAAGTAA

Protein sequence

MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK
Homology
[Close]
BLAST of Carg16522 vs. NCBI nr
Match: KAG7018830.1 (7-hydroxymethyl chlorophyll a reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.1 bits (632), Expect = 4.0e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK
Sbjct: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120

[Close]
BLAST of Carg16522 vs. NCBI nr
Match: XP_023526945.1 (7-hydroxymethyl chlorophyll a reductase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.1 bits (632), Expect = 4.0e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 341 MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 400

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK
Sbjct: 401 PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 460

[Close]
BLAST of Carg16522 vs. NCBI nr
Match: XP_022924576.1 (7-hydroxymethyl chlorophyll a reductase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 248.1 bits (632), Expect = 4.0e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 341 MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 400

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK
Sbjct: 401 PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 460

[Close]
BLAST of Carg16522 vs. NCBI nr
Match: KAG6582432.1 (7-hydroxymethyl chlorophyll a reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 341 MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 400

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNS 120
           PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNS
Sbjct: 401 PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNS 459

[Close]
BLAST of Carg16522 vs. NCBI nr
Match: XP_022980288.1 (7-hydroxymethyl chlorophyll a reductase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 4.4e-61
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVE+YLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 341 MLGLVEKYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 400

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEID ILSNSK
Sbjct: 401 PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDHILSNSK 460

[Close]
BLAST of Carg16522 vs. ExPASy Swiss-Prot
Match: Q8GS60 (7-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCAR PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 4.4e-48
Identity = 88/117 (75.21%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           ML LVE  LEITPTIS G+RRP V ETVKADD AK G+GP+QPAP F+GNIIAF LNL+G
Sbjct: 344 MLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNIIAFILNLVG 403

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILS 118
           PKGLEFARYSLDYHTIRN+LYV RKWGKQRA+ H P+YAKK+V++YN+ G+ID++LS
Sbjct: 404 PKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQIDKMLS 460

[Close]
BLAST of Carg16522 vs. ExPASy Swiss-Prot
Match: Q7XTG7 (7-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HCAR PE=3 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-43
Identity = 81/116 (69.83%), Postives = 99/116 (85.34%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           ML LVE  LE TPT+S G R+P V+ETVKADD+AK G+GPSQPAP F+GN+IAF LNLIG
Sbjct: 355 MLSLVEGLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPAPTFVGNVIAFLLNLIG 414

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRIL 117
           PKGLEFARYSLDYHTIRN+L+V R WGKQRA++H P+YAKK+V+ Y++ G I+ +L
Sbjct: 415 PKGLEFARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVEAYDKDGRIESML 470

[Close]
BLAST of Carg16522 vs. ExPASy Swiss-Prot
Match: P46015 (Uncharacterized protein all1601 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=all1601 PE=4 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13
Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           ML LV+  L+  P +SEGNR+  V + + A D     KG +   P ++  I+   ++ IG
Sbjct: 296 MLDLVQNQLDTQPVMSEGNRQEAVQQGISAYD-----KGVT--LPMWVAKIMGVVIDKIG 355

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLY 107
           PKGLE+AR+S+D H  RN+L+V R   ++ A  H P +AK++V  Y
Sbjct: 356 PKGLEYARFSIDSHFTRNYLFVKRNHPEKLA-AHVPEFAKRIVGQY 393

[Close]
BLAST of Carg16522 vs. ExPASy TrEMBL
Match: A0A6J1E9U1 (7-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432016 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.9e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 341 MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 400

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK
Sbjct: 401 PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 460

[Close]
BLAST of Carg16522 vs. ExPASy TrEMBL
Match: A0A6J1IYV3 (7-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479706 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVE+YLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 341 MLGLVEKYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 400

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEID ILSNSK
Sbjct: 401 PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDHILSNSK 460

[Close]
BLAST of Carg16522 vs. ExPASy TrEMBL
Match: A0A0A0L475 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133900 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.8e-60
Identity = 115/120 (95.83%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTIS GNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG
Sbjct: 340 MLGLVEQYLEITPTISNGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 399

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYV+R WGKQRADKHEPTYAKK+VDLYNQKGEIDRILSN+K
Sbjct: 400 PKGLEFARYSLDYHTIRNHLYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSNTK 459

[Close]
BLAST of Carg16522 vs. ExPASy TrEMBL
Match: A0A5A7U4E5 (7-hydroxymethyl chlorophyll a reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004330 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 7.6e-59
Identity = 113/120 (94.17%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTIS GNRRPLVMETVKADD+AKLGKGPS+PAPKFIGNIIAFFLNLIG
Sbjct: 348 MLGLVEQYLEITPTISTGNRRPLVMETVKADDNAKLGKGPSEPAPKFIGNIIAFFLNLIG 407

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYV+R WGKQRADKHEPTYAKK+VDLYNQKGEIDRILSN+K
Sbjct: 408 PKGLEFARYSLDYHTIRNHLYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSNTK 467

[Close]
BLAST of Carg16522 vs. ExPASy TrEMBL
Match: A0A5D3CZN1 (7-hydroxymethyl chlorophyll a reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002220 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 7.6e-59
Identity = 113/120 (94.17%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           MLGLVEQYLEITPTIS GNRRPLVMETVKADD+AKLGKGPS+PAPKFIGNIIAFFLNLIG
Sbjct: 322 MLGLVEQYLEITPTISTGNRRPLVMETVKADDNAKLGKGPSEPAPKFIGNIIAFFLNLIG 381

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILSNSK 120
           PKGLEFARYSLDYHTIRNHLYV+R WGKQRADKHEPTYAKK+VDLYNQKGEIDRILSN+K
Sbjct: 382 PKGLEFARYSLDYHTIRNHLYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSNTK 441

[Close]
BLAST of Carg16522 vs. TAIR 10
Match: AT1G04620.1 (coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family )

HSP 1 Score: 191.8 bits (486), Expect = 3.1e-49
Identity = 88/117 (75.21%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MLGLVEQYLEITPTISEGNRRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIG 60
           ML LVE  LEITPTIS G+RRP V ETVKADD AK G+GP+QPAP F+GNIIAF LNL+G
Sbjct: 344 MLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNIIAFILNLVG 403

Query: 61  PKGLEFARYSLDYHTIRNHLYVTRKWGKQRADKHEPTYAKKLVDLYNQKGEIDRILS 118
           PKGLEFARYSLDYHTIRN+LYV RKWGKQRA+ H P+YAKK+V++YN+ G+ID++LS
Sbjct: 404 PKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQIDKMLS 460

The following BLAST results are available for this feature:
BLAST of Carg16522 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7018830.14.0e-62100.007-hydroxymethyl chlorophyll a reductase, chloroplastic, partial [Cucurbita argyr... [more]
XP_023526945.14.0e-62100.007-hydroxymethyl chlorophyll a reductase, chloroplastic [Cucurbita pepo subsp. pe... [more]
XP_022924576.14.0e-62100.007-hydroxymethyl chlorophyll a reductase, chloroplastic [Cucurbita moschata][more]
KAG6582432.11.2e-61100.007-hydroxymethyl chlorophyll a reductase, chloroplastic, partial [Cucurbita argyr... [more]
XP_022980288.14.4e-6198.337-hydroxymethyl chlorophyll a reductase, chloroplastic [Cucurbita maxima][more]
BLAST of Carg16522 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GS604.4e-4875.217-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Arabidopsis thaliana O... [more]
Q7XTG71.5e-4369.837-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Oryza sativa subsp. ja... [more]
P460153.5e-1339.62Uncharacterized protein all1601 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTE... [more]
BLAST of Carg16522 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E9U11.9e-62100.007-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Cucurbita moschata OX=... [more]
A0A6J1IYV32.1e-6198.337-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Cucurbita maxima OX=36... [more]
A0A0A0L4756.8e-6095.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133900 PE=4 SV=1[more]
A0A5A7U4E57.6e-5994.177-hydroxymethyl chlorophyll a reductase OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CZN17.6e-5994.177-hydroxymethyl chlorophyll a reductase OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of Carg16522 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G04620.13.1e-4975.21coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR313327-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTICcoord: 1..111
NoneNo IPR availablePANTHERPTHR31332:SF07-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTICcoord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16522-RACarg16522-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033354 chlorophyll cycle
cellular_component GO:0009507 chloroplast
molecular_function GO:0090415 7-hydroxymethyl chlorophyll a reductase activity