Carg16477 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16477
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF1685)
LocationCarg_Chr12: 7788421 .. 7789256 (+)
RNA-Seq ExpressionCarg16477
SyntenyCarg16477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTCCCCAGTCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGTCCCCAATCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGACGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGTAAGAAGAGATTTGAGATTGTTTATAGTGAATTAAAGGAATTAATAAAAAGGTGTAATTTTGATGAATTTGTTCAGGGCAAGATCCGAAGCAAGTGAAGGCTAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAAAAAGGGAATAATGACGTGTACAGAACAGAAGAG

mRNA sequence

CCGTCCCCAGTCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGTCCCCAATCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGACGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCTAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAAAAAGGGAATAATGACGTGTACAGAACAGAAGAG

Coding sequence (CDS)

CCGTCCCCAGTCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGTCCCCAATCCCGACCCGGCCCTCTCCTCGTAAGCGCGGTTGGCGGGTTATCACTAGCCGCCACCGCCGAACTCCTAATGGACAACAAACGCTTAAAAAGAATCACATCAGCTCTATCGCCATTATCATCATGTTCGTCACTCTACGAGCAAGATAACGAGCTAAAACACATGCAATTAGCATCATCATGTTTAAAAAACAAGAAACGTTTATCAAAACAACTTTCAATGTGCGAAACACCAAGAGATCTCGCATGGGAGAAACGACGACGACAAATGCTCCGACCTAGAAACGGTGGCTCGACCGATAGAGATGACTTAACAGACGAAGATTGGAATGAGCTAAAAGGGTGTATCGAATTAGGGTTTGCATTCAACGAGGAAGACGGACATAAGTTGTGTGGTACATTACCAGCTCTTGACTTATACTTCGCCGTGAATCGACAACTCTCGCCGAGTCCAGTGTCGACGCCGCATAGTAGCACATCGACGTCGTCGTCGCTCGGGGGACGAGGTTCATCGTGTGAGAGCCCGAGGGGTGATTGTGAAACATGGAGGGTTTGCAGCCCAGGGCAAGATCCGAAGCAAGTGAAGGCTAAATTAAGACATTGGGCTCAAGCAGTGGCATGTTCGGTAATGCAATCATTGGGAGAAAAATAA

Protein sequence

PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQSLGEK
Homology
BLAST of Carg16477 vs. NCBI nr
Match: KAG7020873.1 (hypothetical protein SDJN02_17561, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484.2 bits (1245), Expect = 6.6e-133
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0

Query: 1   PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSA 60
           PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSA
Sbjct: 1   PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSA 60

Query: 61  LSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN 120
           LSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN
Sbjct: 61  LSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN 120

Query: 121 GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 180
           GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP
Sbjct: 121 GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 180

Query: 181 HSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQSLGE 240
           HSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQSLGE
Sbjct: 181 HSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQSLGE 240

Query: 241 K 242
           K
Sbjct: 241 K 241

BLAST of Carg16477 vs. NCBI nr
Match: KAG6588311.1 (hypothetical protein SDJN03_16876, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126
Identity = 232/234 (99.15%), Postives = 232/234 (99.15%), Query Frame = 0

Query: 1   PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSA 60
           PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSA
Sbjct: 42  PSPVPTRPSPRKRGWRVITSRHRPQSRPGPLLVSAVGGLSLAATAELLMDNKRLKRITSA 101

Query: 61  LSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN 120
           LSPLSSCSSLYE DNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN
Sbjct: 102 LSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRN 161

Query: 121 GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 180
           GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP
Sbjct: 162 GGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTP 221

Query: 181 HSSTST-SSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACS 234
           HSSTST SSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACS
Sbjct: 222 HSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACS 275

BLAST of Carg16477 vs. NCBI nr
Match: XP_022933583.1 (uncharacterized protein LOC111440967 [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 2.6e-105
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0

Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 193

BLAST of Carg16477 vs. NCBI nr
Match: XP_023531903.1 (uncharacterized protein LOC111794029 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 189/194 (97.42%), Postives = 191/194 (98.45%), Query Frame = 0

Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MDNKRLKRITSALSPLSSCSSLYE DNELKHMQLASSCLKNKKRLSKQLSMCETPR+LAW
Sbjct: 1   MDNKRLKRITSALSPLSSCSSLYEPDNELKHMQLASSCLKNKKRLSKQLSMCETPRELAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRR+MLRPRNG STDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRRMLRPRNGSSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTST-SSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 228
           NRQLSPSPVSTPHSSTST SSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA
Sbjct: 121 NRQLSPSPVSTPHSSTSTSSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 180

Query: 229 QAVACSVMQSLGEK 242
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 194

BLAST of Carg16477 vs. NCBI nr
Match: XP_022965570.1 (uncharacterized protein LOC111465428 [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 2.7e-94
Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0

Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K LKRITSALSPLSSCSSLYE DNELKH+QLASSCLKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLKRITSALSPLSSCSSLYELDNELKHIQLASSCLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EK-RRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA 168
           EK RRRQMLRP+N GSTD+DDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA
Sbjct: 61  EKRRRRQMLRPKNSGSTDKDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA 120

Query: 169 VNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 228
           VNRQL PSPVS  HSS S+SSSLG R SSCESPRGDC+TWRVCSPGQDPKQVKAKLRHWA
Sbjct: 121 VNRQLLPSPVSMLHSSKSSSSSLGERSSSCESPRGDCDTWRVCSPGQDPKQVKAKLRHWA 180

Query: 229 QAVACSVMQSLGEK 242
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 194

BLAST of Carg16477 vs. ExPASy TrEMBL
Match: A0A6J1F567 (uncharacterized protein LOC111440967 OS=Cucurbita moschata OX=3662 GN=LOC111440967 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0

Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 193

BLAST of Carg16477 vs. ExPASy TrEMBL
Match: A0A6J1HP26 (uncharacterized protein LOC111465428 OS=Cucurbita maxima OX=3661 GN=LOC111465428 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94
Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0

Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K LKRITSALSPLSSCSSLYE DNELKH+QLASSCLKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLKRITSALSPLSSCSSLYELDNELKHIQLASSCLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EK-RRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA 168
           EK RRRQMLRP+N GSTD+DDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA
Sbjct: 61  EKRRRRQMLRPKNSGSTDKDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA 120

Query: 169 VNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 228
           VNRQL PSPVS  HSS S+SSSLG R SSCESPRGDC+TWRVCSPGQDPKQVKAKLRHWA
Sbjct: 121 VNRQLLPSPVSMLHSSKSSSSSLGERSSSCESPRGDCDTWRVCSPGQDPKQVKAKLRHWA 180

Query: 229 QAVACSVMQSLGEK 242
           QAVACSVMQSLGEK
Sbjct: 181 QAVACSVMQSLGEK 194

BLAST of Carg16477 vs. ExPASy TrEMBL
Match: A0A1S3CHL5 (uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 8.0e-84
Identity = 165/193 (85.49%), Postives = 173/193 (89.64%), Query Frame = 0

Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K L+R+ S+LS  SSC SL+E D+ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRMPSSLSSSSSCPSLHESDDELKHMPLAPPRLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRN GSTDRDDLTDEDWNELKGCIELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRN-GSTDRDDLTDEDWNELKGCIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTP SS ST SSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSAST-SSLGGRSSSFESPRSEFDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 191

BLAST of Carg16477 vs. ExPASy TrEMBL
Match: A0A0A0LY38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690230 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.4e-83
Identity = 163/193 (84.46%), Postives = 172/193 (89.12%), Query Frame = 0

Query: 49  MDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAW 108
           MD K L+R+ S+LS  SSC SL+E ++ELKHM LA   LKNKKRLSKQLSMCETPRDLAW
Sbjct: 1   MDKKHLQRVPSSLSSSSSCPSLHESEDELKHMPLAPPQLKNKKRLSKQLSMCETPRDLAW 60

Query: 109 EKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAV 168
           EKRRRQMLRPRN GSTDRDDLTDEDWNELKG IELGFAFNEE GHKLCGTLPALDLYFAV
Sbjct: 61  EKRRRQMLRPRN-GSTDRDDLTDEDWNELKGFIELGFAFNEEYGHKLCGTLPALDLYFAV 120

Query: 169 NRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQ 228
           NRQLSPSPVSTP SS S SSSLGGR SS ESPR + +TWRVCSPG+DPKQVKAKLRHWAQ
Sbjct: 121 NRQLSPSPVSTPQSSASASSSLGGRSSSFESPRSELDTWRVCSPGEDPKQVKAKLRHWAQ 180

Query: 229 AVACSVMQSLGEK 242
           AVACSVMQSLGEK
Sbjct: 181 AVACSVMQSLGEK 192

BLAST of Carg16477 vs. ExPASy TrEMBL
Match: A0A6J1JGY3 (uncharacterized protein LOC111485003 OS=Cucurbita maxima OX=3661 GN=LOC111485003 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.0e-82
Identity = 162/193 (83.94%), Postives = 172/193 (89.12%), Query Frame = 0

Query: 48  LMDNKRLKRITSALSPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLA 107
           LMD K  +R++S+LS  SSC SL+E ++ELKHM LA    KNKKRLSKQLSMCETPRDLA
Sbjct: 3   LMDKKLFQRMSSSLSSSSSCPSLHESEDELKHMPLAPPRQKNKKRLSKQLSMCETPRDLA 62

Query: 108 WEKRRRQMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFA 167
           WEKRRRQMLRPRN  STDRDDLTDEDWNELKGCIELGFAF EEDGHKLCGTLPALDLYFA
Sbjct: 63  WEKRRRQMLRPRN-ASTDRDDLTDEDWNELKGCIELGFAFKEEDGHKLCGTLPALDLYFA 122

Query: 168 VNRQLSPSPVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWA 227
           VNRQLSPSPVSTPHSSTS SSSLG R SS ESP+ + ETWRVCSPG+DPKQVKAKLRHWA
Sbjct: 123 VNRQLSPSPVSTPHSSTS-SSSLGARSSSFESPKSESETWRVCSPGEDPKQVKAKLRHWA 182

Query: 228 QAVACSVMQSLGE 241
           QAVACSVMQSLGE
Sbjct: 183 QAVACSVMQSLGE 193

BLAST of Carg16477 vs. TAIR 10
Match: AT1G08790.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-47
Identity = 114/188 (60.64%), Postives = 130/188 (69.15%), Query Frame = 0

Query: 56  RITSALS-PLSSCSSLYEQD-NELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRR 115
           R+  ALS   SS SS Y+ +  EL+ M L     K KKRLSKQLSM ET RD+AWE+RRR
Sbjct: 3   RVGEALSVSTSSSSSFYDSEVEELQKMPLEPPKAKAKKRLSKQLSMLETRRDIAWERRRR 62

Query: 116 QMLRPRNGGSTDRDDLTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLS 175
           QML      +   DDLTDED +ELKG IELGF FNEE G  L  TLPALDLYFAV RQ+ 
Sbjct: 63  QMLHHLEKHNEGGDDLTDEDLSELKGSIELGFGFNEEQGQHLTTTLPALDLYFAVTRQI- 122

Query: 176 PSPVSTPHSSTSTSS----SLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQA 235
            SPVSTP S  S+SS    SLG R SS  SP  D ++ +V SPG DP+QVK +LRHWAQA
Sbjct: 123 -SPVSTPGSGGSSSSSRPTSLGDRSSSFGSPISDSDSLKVMSPGDDPQQVKTRLRHWAQA 182

Query: 236 VACSVMQS 238
           VACSV+QS
Sbjct: 183 VACSVIQS 188

BLAST of Carg16477 vs. TAIR 10
Match: AT3G04700.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 173.3 bits (438), Expect = 2.3e-43
Identity = 94/159 (59.12%), Postives = 114/159 (71.70%), Query Frame = 0

Query: 88  KNKKRLSKQLSMCETPRDLAWEKRRRQML-----RPRNGGSTD----RDDLTDEDWNELK 147
           K K RLSKQLSMCETPRD+AWE+RRRQM+     +  + G++D    + +LTDED NELK
Sbjct: 32  KPKHRLSKQLSMCETPRDVAWERRRRQMIMIQEKKLLHKGASDNLCIQANLTDEDLNELK 91

Query: 148 GCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCE 207
           G IELGF FNEE G KLC TLPALDLYFAVNRQLSP P  +   S+S S+S       C 
Sbjct: 92  GSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSRSSSASASTFSYSIPCS 151

Query: 208 SPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 238
             + D ++ ++  PG DP+Q+K +LRHWAQAVACSVMQS
Sbjct: 152 PKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSVMQS 190

BLAST of Carg16477 vs. TAIR 10
Match: AT3G04710.3 (ankyrin repeat family protein )

HSP 1 Score: 167.9 bits (424), Expect = 9.8e-42
Identity = 90/156 (57.69%), Postives = 111/156 (71.15%), Query Frame = 0

Query: 88  KNKKRLSKQLSMCETPRDLAWEKRRRQML-----RPRNGGSTD----RDDLTDEDWNELK 147
           K K RLSKQLSMCETPRD+AWE+RRRQM+     +  + G++D    + +LTDED NELK
Sbjct: 32  KPKHRLSKQLSMCETPRDVAWERRRRQMIMIQEKKLLHKGASDNLCIQANLTDEDLNELK 91

Query: 148 GCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCE 207
           G IELGF FNEE G KLC TLPALDLYFAVNRQLSP P  +   S+S S+S       C 
Sbjct: 92  GSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSRSSSASASTFSYSIPCS 151

Query: 208 SPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSV 235
             + D ++ ++  PG DP+Q+K +LRHWAQAVACS+
Sbjct: 152 PKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSI 187

BLAST of Carg16477 vs. TAIR 10
Match: AT5G28690.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 167.9 bits (424), Expect = 9.8e-42
Identity = 95/161 (59.01%), Postives = 111/161 (68.94%), Query Frame = 0

Query: 88  KNKKRLSKQLSMCETPRDLAWEKRRRQMLRPR-------NGGSTDRDDLTDEDWNELKGC 147
           K K+RLSKQLSM ETPRD+AWEKRRRQML+ +       +    D  DLTDED  ELKG 
Sbjct: 33  KPKQRLSKQLSMRETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGS 92

Query: 148 IELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSTSSSLGGRGSSCE-- 207
           IELGF F+EE G KLC TLPALDLYFAVNRQLSP P  +P SS     SL     S    
Sbjct: 93  IELGFGFSEEAGQKLCNTLPALDLYFAVNRQLSPLP--SPSSSNGGDGSLSSTSVSSSSI 152

Query: 208 --SPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSVMQS 238
             SP+ D ++ ++  PG +P+QVK +LRHWAQAVACS+MQS
Sbjct: 153 PCSPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQS 191

BLAST of Carg16477 vs. TAIR 10
Match: AT2G43340.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 89.4 bits (220), Expect = 4.4e-18
Identity = 63/179 (35.20%), Postives = 92/179 (51.40%), Query Frame = 0

Query: 62  SPLSSCSSLYEQDNELKHMQLASSCLKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNG 121
           S  SSCS    ++ E+ +        K  K+L K              K+   +L     
Sbjct: 26  SSFSSCSYSESEEEEINNGFGVVQSKKQTKKLEK--------------KKSNVLLEGYVV 85

Query: 122 GSTDRDD------LTDEDWNELKGCIELGFAFNEEDGHKLCGTLPALDLYFAVNRQLSPS 181
            S   DD      LTD+D  ELKGC++LGF FN E+  +LC TLPAL+L ++++++    
Sbjct: 86  DSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALELCYSMSQKF--- 145

Query: 182 PVSTPHSSTSTSSSLGGRGSSCESPRGDCETWRVCSPGQDPKQVKAKLRHWAQAVACSV 235
            +   H   S SSS   + S  +SP     +W++ SPG +P  VKA+L+ WAQAVAC+V
Sbjct: 146 -IDQDHHHHS-SSSPEKKSSVLDSPVSPIASWKISSPGDNPDDVKARLKFWAQAVACTV 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7020873.16.6e-133100.00hypothetical protein SDJN02_17561, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6588311.12.7e-12699.15hypothetical protein SDJN03_16876, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022933583.12.6e-105100.00uncharacterized protein LOC111440967 [Cucurbita moschata][more]
XP_023531903.11.3e-10197.42uncharacterized protein LOC111794029 [Cucurbita pepo subsp. pepo][more]
XP_022965570.12.7e-9491.75uncharacterized protein LOC111465428 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F5671.3e-105100.00uncharacterized protein LOC111440967 OS=Cucurbita moschata OX=3662 GN=LOC1114409... [more]
A0A6J1HP261.3e-9491.75uncharacterized protein LOC111465428 OS=Cucurbita maxima OX=3661 GN=LOC111465428... [more]
A0A1S3CHL58.0e-8485.49uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=... [more]
A0A0A0LY381.4e-8384.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690230 PE=4 SV=1[more]
A0A6J1JGY32.0e-8283.94uncharacterized protein LOC111485003 OS=Cucurbita maxima OX=3661 GN=LOC111485003... [more]
Match NameE-valueIdentityDescription
AT1G08790.14.5e-4760.64Protein of unknown function (DUF1685) [more]
AT3G04700.12.3e-4359.12Protein of unknown function (DUF1685) [more]
AT3G04710.39.8e-4257.69ankyrin repeat family protein [more]
AT5G28690.19.8e-4259.01Protein of unknown function (DUF1685) [more]
AT2G43340.14.4e-1835.20Protein of unknown function (DUF1685) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012881Protein of unknown function DUF1685PFAMPF07939DUF1685coord: 129..186
e-value: 5.3E-23
score: 80.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR31865:SF3OSJNBA0071G03.3 PROTEINcoord: 67..237
NoneNo IPR availablePANTHERPTHR31865OSJNBA0071G03.3 PROTEINcoord: 67..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16477-RACarg16477-RAmRNA