Carg16445 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16445
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S23-1
Location	Carg_Chr12: 7485703 .. 7487666 (+)
RNA-Seq Expression	Carg16445
Synteny	Carg16445

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGAGCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCTGTTAAGTATTCTTCTCATCTGGTTTTAAATGCATAATCAAGTTGCATGTTTTTCCCTTTTCCAGTTCATCTCTTAGTGAAGATTAATGAGTTTCCTTATTGATTCTAATCTATTTAGTTACCATATAAATGGAAGCTATAGTATTCTGAATCTGAAGTTCGAATAGGTATCAGGTTAAGTTGCCTAAATACGAGTATGTTTGGGAGTACTTATAAACTTCTAAAATAAATGCTTATAACAAAAGTGTAACGGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTTAAAACGCGCCTACTAGGGAGAGGTTTCCACACCCTTGTAAGGAAGGCTTCGTTACCCTCTCCAACTGATATGGGATCTCACAATCCACCTCTCTTGGGGGGCCAACGTCCCCGCCCGGTAATTGACTCTAATACCATTTGTAACGGTCTAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGTTTTCCCTTCCGCCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCATCTACTAGGGAGAGGTTTTCACACCCTTGTAAGGAAGGCTTCGTTCCCCTCTCCAACCGATGTGGGATTTCACAAAAAGTCTTTAATCACGAGCACCTTCGAAAAGAAGTGCTTAATGACGGATCATATTCGTGTTTGGTCCAACATTCTTAAGAATACTTTTCTTTTAGGTTCTTTCTCATCAAGCACTTGAGCCAATGGGGAAAATGCACTTTATCAGTGTTTTCTTACGAATCATTCAAGTGTTTTGAACAGTTTTTTTTTTATAAAAGAATACTTTTAAGTTACTTTCAAACATAGTATGCACACGACATTTCTCTGCCGGATTCGTTACATTTGTTGCCTTTCTTCTATGACTTTCTGGATGTAGTAGAAGCAAATTGAAGCACTTTTTCATTTATCTTTGATTAAATCAAGAACAATATTCAAGGTTAGATTCAAATCCAATGCAAAGCATCAGTTGTGGTGGTGCCTTTACAGTATTGAAGTAGATTGCCTGTGATCTCAGAGGGTTTTAATATTGCACTTATTAAGCTTGTGGGCTTCTGGATTCTGTTGTGTGATAGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGCAAGCTGCAAGGTAATTGACATTCAAAGCGCAATGATCTTAGTGTATTGCTTTTGAAGTTACAATTTTGTGTTTATGGTTGAGTACGTGATAGTTAACTATCTTGCCACGCACTCGGTTCGTTCATGGCTCCATACAACCATGTATTCAGTTACGTTGTTATTGTTAAGTTTCTCGACTCTTGTCATAGCTAAGGAGAAATTATTGGACGGAGTATGTTACAATGTGACAATGGCTTTGCAAAATGTATTTTCATAGGGACTAAATTGGTAACTTAATTTTAGATGTCGTATCGAGCTTTATATATTCCGACCCCATTAGTTGCTTGTTGGGGGTGGTTTCGAAAGTAGAATTAAAGTGACTCCAATTCCATTTCTTGAGTAGACATTTTTGTTATTTTCCCCCAAAAAAGAACTGTTTTTTTCAACTCATACATGATGTAGGTACACATCCCTTTTATTTTGTCCAATAAGAATCATAGTCCATACACTTTCTCTTACCAAACCGGAATTGACCTAAATTGTTTTCATTTGATGATTATGATCTCAATTCA

mRNA sequence

ATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGAGCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGCAAGCTGCAAGGTAATTGACATTCAAAGCGCAATGATCTTAGTGTATTGCTTTTGAAGTTACAATTTTGTGTTTATGGTTGAGTACGTGATAGTTAACTATCTTGCCACGCACTCGGTTCGTTCATGGCTCCATACAACCATGTATTCAGTTACGTTGTTATTGTTAAGTTTCTCGACTCTTGTCATAGCTAAGGAGAAATTATTGGACGGAGTATGTTACAATGTGACAATGGCTTTGCAAAATGTATTTTCATAGGGACTAAATTGGTAACTTAATTTTAGATGTCGTATCGAGCTTTATATATTCCGACCCCATTAGTTGCTTGTTGGGGGTGGTTTCGAAAGTAGAATTAAAGTGACTCCAATTCCATTTCTTGAGTAGACATTTTTGTTATTTTCCCCCAAAAAAGAACTGTTTTTTTCAACTCATACATGATGTAGGTACACATCCCTTTTATTTTGTCCAATAAGAATCATAGTCCATACACTTTCTCTTACCAAACCGGAATTGACCTAAATTGTTTTCATTTGATGATTATGATCTCAATTCA

Coding sequence (CDS)

ATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGAGCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGCAAGCTGCAAGGTAA

Protein sequence

MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR

Homology

[Close]

BLAST of Carg16445 vs. NCBI nr
Match: XP_022937466.1 (uncharacterized protein LOC111443868 [Cucurbita moschata] >KAG7020841.1 hypothetical protein SDJN02_17529, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.8 bits (525), Expect = 8.4e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR
Sbjct: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 99

[Close]

BLAST of Carg16445 vs. NCBI nr
Match: XP_022969628.1 (uncharacterized protein LOC111468599 [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 2.4e-49
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGAASMSATSALLVRLFSPECEPQNIAAYDKG+AAR
Sbjct: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGKAAR 99

[Close]

BLAST of Carg16445 vs. NCBI nr
Match: XP_023538321.1 (uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 5.4e-49
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRRFFGFSDG+LMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGAASMSATSALLVRLFSPECEPQNIAAYDKG+AAR
Sbjct: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGKAAR 99

[Close]

BLAST of Carg16445 vs. NCBI nr
Match: XP_038889141.1 (uncharacterized protein LOC120079031 [Benincasa hispida])

HSP 1 Score: 194.5 bits (493), Expect = 4.3e-46
Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRRF GFSDGE+MRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRFLGFSDGEVMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGAASMSATSALLVRLFSPECEPQNIAAYDK +  +
Sbjct: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVK 99

[Close]

BLAST of Carg16445 vs. NCBI nr
Match: XP_022156333.1 (uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156334.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156335.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156336.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156337.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156338.1 uncharacterized protein LOC111023254 [Momordica charantia])

HSP 1 Score: 187.6 bits (475), Expect = 5.3e-44
Identity = 89/99 (89.90%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Sbjct: 61  WAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR 99

[Close]

BLAST of Carg16445 vs. ExPASy TrEMBL
Match: A0A6J1FAF1 (uncharacterized protein LOC111443868 OS=Cucurbita moschata OX=3662 GN=LOC111443868 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.1e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR
Sbjct: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 99

[Close]

BLAST of Carg16445 vs. ExPASy TrEMBL
Match: A0A6J1I1J3 (uncharacterized protein LOC111468599 OS=Cucurbita maxima OX=3661 GN=LOC111468599 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGAASMSATSALLVRLFSPECEPQNIAAYDKG+AAR
Sbjct: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGKAAR 99

[Close]

BLAST of Carg16445 vs. ExPASy TrEMBL
Match: A0A6J1DQC3 (uncharacterized protein LOC111023254 OS=Momordica charantia OX=3673 GN=LOC111023254 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.5e-44
Identity = 89/99 (89.90%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 1   MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
           MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR
Sbjct: 1   MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61  WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR 100
           WAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Sbjct: 61  WAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR 99

[Close]

BLAST of Carg16445 vs. ExPASy TrEMBL
Match: A0A1S3BWM4 (uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQ 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD+G+
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 96

[Close]

BLAST of Carg16445 vs. ExPASy TrEMBL
Match: A0A1U8BA55 (uncharacterized protein LOC104611304 OS=Nelumbo nucifera OX=4432 GN=LOC104611304 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRRFFGFSDGELMRSDAKPCS+LM+ TAG+ TVGG LAFW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSRLMRHTAGVFTVGGALAFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQ 97
          WAACGA SMS+TSALLVRLFSPECEPQNIAAYDKG+
Sbjct: 61 WAACGAVSMSSTSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of Carg16445 vs. TAIR 10
Match: AT1G57540.1 (unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 6.4e-40
Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALR+  G+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYD 94
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYD
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYD 93

[Close]

BLAST of Carg16445 vs. TAIR 10
Match: AT1G57540.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 6.4e-40
Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALR+  G+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYD 94
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYD
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYD 93

[Close]

BLAST of Carg16445 vs. TAIR 10
Match: AT1G57540.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 6.4e-40
Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALR+  G+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYD 94
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYD
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYD 93

The following BLAST results are available for this feature:

BLAST of Carg16445 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937466.1	8.4e-50	100.00	uncharacterized protein LOC111443868 [Cucurbita moschata] >KAG7020841.1 hypothet...	[more]
XP_022969628.1	2.4e-49	98.99	uncharacterized protein LOC111468599 [Cucurbita maxima]	[more]
XP_023538321.1	5.4e-49	97.98	uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]	[more]
XP_038889141.1	4.3e-46	92.93	uncharacterized protein LOC120079031 [Benincasa hispida]	[more]
XP_022156333.1	5.3e-44	89.90	uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156334.1 uncha...	[more]

BLAST of Carg16445 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg16445 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAF1	4.1e-50	100.00	uncharacterized protein LOC111443868 OS=Cucurbita moschata OX=3662 GN=LOC1114438...	[more]
A0A6J1I1J3	1.2e-49	98.99	uncharacterized protein LOC111468599 OS=Cucurbita maxima OX=3661 GN=LOC111468599...	[more]
A0A6J1DQC3	2.5e-44	89.90	uncharacterized protein LOC111023254 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A1S3BWM4	1.6e-43	89.58	uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=...	[more]
A0A1U8BA55	1.6e-43	89.58	uncharacterized protein LOC104611304 OS=Nelumbo nucifera OX=4432 GN=LOC104611304...	[more]

BLAST of Carg16445 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G57540.1	6.4e-40	78.49	unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bac...	[more]
AT1G57540.2	6.4e-40	78.49	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT1G57540.3	6.4e-40	78.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36331	40S RIBOSOMAL PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16445-RA	Carg16445-RA	mRNA