Carg16425 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16425
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin
Location	Carg_Chr12: 7283160 .. 7287292 (+)
RNA-Seq Expression	Carg16425
Synteny	Carg16425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTACGCCGAACCACTGTGGGATTAGTCCAACCGAGTTTCCAAACACTACCAAAAAAAAAGCTGTGCAAAGCGCTTGCCTTCATTCCTTTTCATCTCATCGCGACTGAATTCTTTCTCTCTCAAGCAAGAGACTTCTCGCGGATTTCCAGGTTAGAATTCGAAGCAATCGAGTTCGAAATCAACAATCAAAGTTCCGAGAATTCGCATATTTCACTTTTTTTTTTTTTTTCTGGAAGCAAAATAGTTGATTCTGTTTTGTGAGAACTGTATGATTAGTTAGCGTATAATCGATTTTAGGGAATTTCGTTTGTGAGAACCCATACTTCGATGAATTTCCGAACTGTGAACTTCAAGATTATGTGGAGAATTGATGAACGTTGTTTGTGAATGAGCGGAATTCAAGTTCTGTATTGATTTGTTACTGGCATTATGTTATACGCAGACACTGTTAATTTCTCATTGATCATATGAGTAGTTTGTAACTTCATGAACAAGATGATAATCTGTCATAGATGTTTTCTTATAAAATTTTCCATGTGATGAGTTGGATGCATGTTTGTGAGTTTCAGACTGCGGCGGTGGAGGCTGGATTTTTTTGAAGTGTTGATCCTTTATTTATTGTTTCAAGATGGTGAGTAGTTCATATCTCTCTCTATCTTTGTCTGAATATAAGCGATTCATACCTTAACCTCGCTACAATGCTTTTATTGTAATTTCTCTGGATTAACTAGTTTACAAGCACGGAAAACTCAAAGAAGGCCTGTCATAAAATTTGTGTTTTCATCTGAAGTATACTTTTTTGGAGCCTGTACTGAATAATTTTCAGTTACTACTATCTTGTTGAATTTACCTTCTAATTACGTACCACTGTTTCCATATATTCTTTATTATCTATGTAATTCTCTGTTTGTTCTAAACTATGTCATAAATTCAAGGTGAAATTATTTTCCTATTAAACAGTAGAACAAAGACTTTTTAACACTTGGTTTAAGAGTGGCCAGTTTGATAGTCGAATGAGAAACTTACTGTCAGCAATGTACAGGGTCATGTGGTGGAGATCATCTGTTTTAATGTTTCTAGTAAGTCAGTGGCAAATATACTTAGTCAGTATGAGGGTGGAAATTCTTTCAAAGCAGGATTCATTTTACTCCAGTTAACCAGGAGTTCGATTTTCTTGAAAGATCAAACATTCTTTAATGAGAAGTACATGCCTTTTTGTGATCATATACAGTTCAAAGCTTCTAGTTGTAGTGCTTCATGCAGTGAGCTTTGCTATCACTCAACTTCTTTGATCAATTTAGACCGGGTGTGTTTTTTTTGTTAGGAACTACGAATCTCCACAATAGTATGATATTGTCCACTCTGAGCCTAAGTTCTTATGGCTTTGCTTTTGGTTTCCCCAAAAGAGCTCATACCAATAGAGATGTATTCCTTACTCATAAACCCATGATCATCCCCTTAATCAGCGAATGCAGTTCTCCCTCCCAATAATCCTCAACAATCCTCCTCTCGAACAAAGTATACCATAGAGCCTCCCCTAAGGCCTATGAACCCTCGAATAGCCTCCCTTTAATCGAGGCTCGACTCCTTCTCTGGAGCCCTCGAACCAAGTACACCTTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGACTCACAATTTCTTTGTTTAATACTTGAAGATTCTATTGACATGGCTAAGTTAAGGGCATGACTTATGTTAGGAACCACGAATCTCCACAATGATATGATATTGTCCACTCTGAGCTTAGCTCTCATGACTTTGATTTTGGTTTCTCCAAAAGGCCTCATACCAAAAGAGATGTATTCCTTACTTATAAACTCATGATCATCCCCTTAATTAGCCAATGTAGCCAATGTGGGACTCCCTCCCAGTAATCCTCAACATTTTGTAATAATCTCGTTTGGCAAGAGAACTCTCGTCTCCCTAGCCTTTGGGTTTGTTTGATTAAATGCTGTGAAATCAAATCTTGTCTCAAGAAACCTACAAAGGATATTGGGAAGATGTGGTGTTTAGATTCTATTAACTGCCAACACTTTTTTCTGATTGATGTTCTATTTCTCAAATTGGTTTCTTTGGTTTGTCTCTTCTCTTGGCTTTGACACATTTATATTTTCTCTCACTTCATTCTTCTTCATCTGTTGAGTTATGGGGTCAGTTCTACGTTTGTTTGCATTTGGTAAGCTTTGTGCTTGTTATTTTATTTGTTCATTAGTTTTTATTGCATCATATCAAACCAAAATAAGTAAATCTGGTTCTCTCTGTCTCTCTCTTTTTTTTAATAAGATACAGAAAGGGTGTTATAAACCACCAAAAAAAAGGACAGCCTGCTTGTTCACTTTTTGTAAAGATGTATACACACCATATGGACCTGAGTACTAACAACTTCAATTAATTCACAATTTCCAATTGACTGTGACTATTCAGTATGTTTGTTATGCCATATTTATGTATAGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTATGCCTTAAATTCATAGATTTACTACATTTGGTCATCTAGCATCGGATATTCTGGAAATATTAAGATGAAGACAATACGACAGCTGCGGCTCTAACTAATATTTGCTATGTATTTCCAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGGTTTTCTTCTACCCACCCCAACATTTTTTTTTGTGAACTTCTTACATGTTTTCTGATTAGGGACTGAATTATTTGAGGGTGGATTTTTTTCATAGTTATGCTCAAATTACAGGTCTCAGTCTTTGAACTTTTAAGCTTATGTCTTAATAAGTCATTCAACTTTCAATCTTGTAGTTAATAGGTTACTGAACTTCATAAGTATCGAATAAATCTCTAAATTTTCAATTTTGCATTTAATAAGTTCCATCCCAACAATTTTGTGAACTTCTGACGTGTTTTTAAAAGTATATTTTCTGATTAGGGACTGAATTAGTTGTGAGCGTGGACTTTTTCATTGTTATGATCTTGCTTAAATTTCAGGTTTTAGTTTTTGAACGACCTTCAATTTTGTGTCTAATAGGTTGCTGAACTTGAAAAGTGTCGTTTTCCTCAAACTTTCAATTTTGTGTTAGTAAGCTTGAAAATTTTAGAACATCTCGATTAAGTCAACGAACTATTAGACACAACATTAAAAATTTAATCACCTATTAGAAGCAAAATTGAAAATTTAAGAATGTATTTGGCGTTCTTTAAAGCTCAAAGAATTATCATACACAAAATTGAAAGTTGATTGATCTACATTAGTTCATAGACTAAATAGACATAAATATGAAACTTATGATCTTCTTTGTTGGATTTGGATTTAAAATATGGAACTCTGTCTCATCACGCATTTTCTTGATCATTTTCCCTTCTTTGTGTAGATGATAACGAGTTCGAGGAGATCAACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAAGGACCGAAAGTTTTCTTCTACTATGTGTGGTAGTTTATGATGTTCAGCCATCAAGCTTGTGGTGTATTATTGAAATAACTGTTCTATCAGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGACTTGGATATCGTAACTCCATGCATTCTCTTTGTTATCCCCCAAAAGTTGCATTGCTGATTGAACTCATTCATGCATTGATTGCTACAAGTTCTATAATATATATGAGTTGAGAATTTTGTTAGGACCTTTTTAATTTCCTTTAAACTATATGAATTTGGTTTTTAATCGACTCTTTTTCTTATTCATATGATCTTCACAGTGGTGATGGTTTCAAAATACTGTGAGTTTTGATGTTTTTGTTAGGAATCATGACTCTCCACGATGGTATGATATTGTCCCATTTGAACATAAGCTCTCGTGGCTTTACTTTGGGCTTCTCCAAAAGGCCTCATACC

mRNA sequence

AATTTACGCCGAACCACTGTGGGATTAGTCCAACCGAGTTTCCAAACACTACCAAAAAAAAAGCTGTGCAAAGCGCTTGCCTTCATTCCTTTTCATCTCATCGCGACTGAATTCTTTCTCTCTCAAGCAAGAGACTTCTCGCGGATTTCCAGACTGCGGCGGTGGAGGCTGGATTTTTTTGAAGTGTTGATCCTTTATTTATTGTTTCAAGATGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAACGAGTTCGAGGAGATCAACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAAGGACCGAAAGTTTTCTTCTACTATGTGTGGTAGTTTATGATGTTCAGCCATCAAGCTTGTGGTGTATTATTGAAATAACTGTTCTATCAGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGACTTGGATATCGTAACTCCATGCATTCTCTTTGTTATCCCCCAAAAGTTGCATTGCTGATTGAACTCATTCATGCATTGATTGCTACAAGTTCTATAATATATATGAGTTGAGAATTTTGTTAGGACCTTTTTAATTTCCTTTAAACTATATGAATTTGGTTTTTAATCGACTCTTTTTCTTATTCATATGATCTTCACAGTGGTGATGGTTTCAAAATACTGTGAGTTTTGATGTTTTTGTTAGGAATCATGACTCTCCACGATGGTATGATATTGTCCCATTTGAACATAAGCTCTCGTGGCTTTACTTTGGGCTTCTCCAAAAGGCCTCATACC

Coding sequence (CDS)

ATGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAACGAGTTCGAGGAGATCAACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAA

Protein sequence

MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW

Homology

[Close]

BLAST of Carg16425 vs. NCBI nr
Match: KAG7020821.1 (hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Carg16425 vs. NCBI nr
Match: XP_022937980.1 (uncharacterized protein LOC111444204 [Cucurbita moschata] >XP_022969566.1 uncharacterized protein LOC111468551 [Cucurbita maxima] >XP_023536780.1 uncharacterized protein LOC111798058 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Carg16425 vs. NCBI nr
Match: KAG6586044.1 (hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGN 103
           DQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADSGN
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102

[Close]

BLAST of Carg16425 vs. NCBI nr
Match: XP_008452565.1 (PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo])

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRK+DN+FEEINIV  NDFYQSR+ADSGNW
Sbjct: 61  DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 103

[Close]

BLAST of Carg16425 vs. NCBI nr
Match: XP_038889494.1 (uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida])

HSP 1 Score: 191.8 bits (486), Expect = 2.9e-45
Identity = 95/103 (92.23%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRKDDN+FEEI+I+  NDFYQSR+AD+GNW
Sbjct: 61  DQKVENDAVVALTLRKDDNDFEEIDIIQPNDFYQSRDADAGNW 103

[Close]

BLAST of Carg16425 vs. ExPASy TrEMBL
Match: A0A6J1HY58 (uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.2e-48
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Carg16425 vs. ExPASy TrEMBL
Match: A0A6J1FIC7 (uncharacterized protein LOC111444204 OS=Cucurbita moschata OX=3662 GN=LOC111444204 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.2e-48
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADSGNW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNW 103

[Close]

BLAST of Carg16425 vs. ExPASy TrEMBL
Match: A0A1S3BTJ1 (uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRK+DN+FEEINIV  NDFYQSR+ADSGNW
Sbjct: 61  DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 103

[Close]

BLAST of Carg16425 vs. ExPASy TrEMBL
Match: A0A5A7UM04 (Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 94/101 (93.07%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 3   MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQ 62
           MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQ
Sbjct: 1   MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 60

Query: 63  KVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           KVENDAVVALTLRK+DN+FEEINIV  NDFYQSR+ADSGNW
Sbjct: 61  KVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGNW 101

[Close]

BLAST of Carg16425 vs. ExPASy TrEMBL
Match: A0A1S4DYF9 (uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.5e-44
Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW 104
           DQKVENDAVVALTLRK DN+FEEINIV  NDFYQSR+ADSGNW
Sbjct: 61  DQKVENDAVVALTLRK-DNDFEEINIVHPNDFYQSRDADSGNW 102

[Close]

BLAST of Carg16425 vs. TAIR 10
Match: AT5G57860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 7.9e-33
Identity = 67/92 (72.83%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEINIVSTNDF 93
          DQKVENDAVVALTL+KDDNEFE++NI    DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Carg16425 vs. TAIR 10
Match: AT5G57860.3 (Ubiquitin-like superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 7.9e-33
Identity = 67/92 (72.83%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEINIVSTNDF 93
          DQKVENDAVVALTL+KDDNEFE++NI    DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Carg16425 vs. TAIR 10
Match: AT5G57860.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 7.9e-33
Identity = 67/92 (72.83%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEINIVSTNDF 93
          DQKVENDAVVALTL+KDDNEFE++NI    DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Carg16425 vs. TAIR 10
Match: AT5G57860.4 (Ubiquitin-like superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-20
Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVEN 67
          DQKV +
Sbjct: 61 DQKVSH 66

[Close]

BLAST of Carg16425 vs. TAIR 10
Match: AT5G37640.1 (ubiquitin 9 )

HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04
Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTL 60
          M+M I  K   + T  I     +T  N+K K++ +   P+  QRLI   SG++L+D +TL
Sbjct: 1  MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIF--SGKLLDDGRTL 60

Query: 61 ADQKVENDAVVALTLR 76
          AD  ++ D+++ L LR
Sbjct: 61 ADYSIQKDSILHLALR 74

The following BLAST results are available for this feature:

BLAST of Carg16425 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020821.1	2.8e-48	100.00	hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022937980.1	1.1e-47	99.03	uncharacterized protein LOC111444204 [Cucurbita moschata] >XP_022969566.1 unchar...	[more]
KAG6586044.1	2.0e-46	99.02	hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008452565.1	2.2e-45	93.20	PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]	[more]
XP_038889494.1	2.9e-45	92.23	uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]	[more]

BLAST of Carg16425 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg16425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY58	5.2e-48	99.03	uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551...	[more]
A0A6J1FIC7	5.2e-48	99.03	uncharacterized protein LOC111444204 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A1S3BTJ1	1.1e-45	93.20	uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UM04	1.2e-44	93.07	Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4...	[more]
A0A1S4DYF9	3.5e-44	93.20	uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg16425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57860.1	7.9e-33	72.83	Ubiquitin-like superfamily protein	[more]
AT5G57860.3	7.9e-33	72.83	Ubiquitin-like superfamily protein	[more]
AT5G57860.2	7.9e-33	72.83	Ubiquitin-like superfamily protein	[more]
AT5G57860.4	2.6e-20	69.70	Ubiquitin-like superfamily protein	[more]
AT5G37640.1	2.0e-04	35.53	ubiquitin 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 3..75 e-value: 7.4E-9 score: 45.4
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 5..76 e-value: 3.6E-10 score: 39.5
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 15.405305
None	No IPR available	GENE3D	3.10.20.90		coord: 1..93 e-value: 1.3E-19 score: 72.1
None	No IPR available	PANTHER	PTHR47725	OS03G0364000 PROTEIN	coord: 1..99
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16425-RA	Carg16425-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding