Carg16412 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATTCGATTACGTGTTTGGAAATTGGAAATCGGTCTCATTGCTTTCCCCAATCGTCTTCTGCAGTCGCCGGAACTGAATATCGCCGCCTTCGTTTATGGCAACTGAAGAAGCTCCTTCCTCTTCGACGCCTGTCGACGGCGGCGCTCATCTTACTCCTCCTCCTTCCACTGACATAGCAGCTTCTGCTTCTTCGGCCATTGATTTTCTCACCCTCTGTCAGCGCCTCAAGGTAACCTCAAATTCTGTCTTTCAAACAATTCATTTTCTTCGCCAAATTGTTTGATGCGTGGTTTCATCGCCAAAAATGAAACCAGAGATGGCGGAATATGGACGATTAGCTATGTTTCTTGTTCTGTCTTTGAATGAATGTTTGTGGCTAACACTAACGAGTTTTCTTTGTTTCCATGGCTGCCAAATTTGGATGAAGCTCATTAACAAATTTGGATGCGTTTATAAATCCTTTATAGCTTGGTTTGTGTAATTTCTTTTACACTTTTCGAGTGTTGTTTGATTATGTTGTTTATTTTGATCTGAATTAGACAACGAAAAGAACTGGATGGATTTATAAAAGAGTCAAGGATCCGGAATCCATAGCAGATCATATGTACCGAATGGGAATAATGGCGCTCATCAGTTCCGATATTCCGGGCGTCGATAGAGACAAGTTTGATACTCATAACCTTTTGCTTTTCAGCTCTTATGATATGTTTCATTCTTCATTCTTCGTTGCTGTTTTTGGCCTCTTGCACCTGTGAGTGGAAGGTATTTTGATACTATATTTCTATATATCTTCAGGTGCATAAAAATGGCAATTGTTCATGACATTGCAGAAGGTGGGATATACATTCTTGTCCATTCATTGATCATTTTATGTTTGAATGTCATTTGGACTAGCAAGAGACAGTGATATCATCTGTTGTCTAAGTTGGGTTAGAATGATATAGATATTGCTTACATATTTTACTGAAACGAACTCGATGTTTTTGGGATCTTTCTTAATTTTGCTTCGAATTCTAATTCTGAAGTTCGATAATTTCCCCAAAAGTGTAATACTGAAAGGCTCGATCAATATAGTTCCACGTTGGCTAATTAAGAGGAAGATCATGAGTTTATAAGTAAGGAACACTATCTCCATCGGTATGAGGCCTTTTGGAAAAACCAAAAGCAAAACCATGAGAGCTTATGCTCAAAGTAGACAGTATATACCATTGTGGAGAGTCGTGATTCCTAACATATACAATCTTGGAATCATATTTATCTTGAAATGTTGATGGGACTGCTGTTGTTCAATGACCTTTTGTCCATTATTTGTAAATTATTTGAACAGCAATTGTTGGTGACATTACCCCATTTGATGGGGTTTCAAAGTTGGAAAAGAATAGAAGAGAACAAGAAGCACTAGACCACATGTGCAAATTGCTTGGTGGTGGTTCAAGAGGTATGCCATTCAGCCAATCATTTCTTGAGTTTATATTAAAAACTCCAAATCACTCACTTGTTTGTGTGTGAAAATTGCAGCCAAGGAAATCGGTGAATTGTGGATGGAGTATGAGAATACTAGTTCGCCAGAAGCTGAAATTGTGAAGGATCTTGATAAGGTAAAAACCTAAAATTATCCTTTCAAACAAGCTTCTTGCTGAATATGAAAATGGTCAGTCTTCTTATCCTAAATGGATAAAAAAGCTAATCCCATAGCTTATATGGATAAAAAGTGGCTGTGGCACTTAGTTGGTCAATGAAAATTTTGGGTATGAAGTAAAACATGATATTTTAAGTGTCCGACTCGCATGTAAGCATCGTCCAAATGTATTTAACAGTGTGGCCAGGGATTAGTTTTGGTAGGTCTATATGAGAATTATGCTAGCCAGCAAAGAACTTGTTTGATGCGCATCACGGCTGCTAACCTTTATTTATTTGTCATGATTTGCTTCAGGTGGAGATGATTCTTCAAGCTCTAGAATATGAAAATGGTCAGTTTTCTTATCCTGATGTTTACTAACACACATTTTGACTTATTTCTCAAAAGCAGAATCTTCTTTTATGATATTTATTTGGATAAGTAACAGCGGTTTTGCTGAAGTCTTGAAATCCTATTGACAAGGGTTACATGATTAGATTAACATGATTAGTTTTAAAGCGCGTTTGTGTTAGGGAGAGATTTTCATGCTCTTATAAAGAATGTTTCATTCTACTCCCCAATCGATGTGGGATCTCACAATCCATCCCCCTTCAAGGCTCAGCGTCCTCATGGACATTCGTTCTCTTCTCCAATCGATGTGGGACCCTTCAATCCACTCCCTTCGTGGCCTAACATCCTTGCTGGCACACTGCCTCGTGTCTACCCCTTTTGGGGCTCAGCCTCCTCGCTAGCACATCGCACGATGTCTGGCTTTGATACCATTTGTAACGGTCCTAAGCCCACCACTAGCAGATATTATCCTCTTTGAGCTTTCCCTTTCAGGTTTCTCCTCAGGTTTTTAAAACATGTCTGCTAAGGAGATGCTGGATCTCACACTTAGGTAAGATCCACTTGGAACATAATTTAAGCAACCTCATCCCTGCACCGCCAATGTGGGATACCCACTACAATTCAATAAATGAGCAGAAGGATGATCTTGTCATTACTTTGGAACATAATGTAACCAACGTGGGAACTTAACCAACGTGGGACTCTGCCAATAATCCTCGACAATACCCCCTCTACAATTCAATAAATGAGCATGACAGATAGATCTTGAAGATCCATGCAAAGAAAATTTTAGTATTGTCATGATATTTTTGTTTCTTTTATTCGTGTTCGTGTTCTTAAGGATGTCATGCCGATATCACTGATAGGTTGCTGATGCATCTACACCTTTTAATTTGGTTTTACATCATCTTTTATGACACTTGGTTCAACTTCTTTTTAGCTTCCTACCTGAATATTTCTTGGATTATGCCCCAAAACTTTCATTAGGGTCATTAGATCATTCTATTCTTAAATACCCGTCTTTTGAAACTCTTTTACTGCACTAAGTGCTACAATTTATCAAGGCAATCAAAGATTTTTTTGTTACCTGTGTGCAGAGCAAGGGAAGGATTTGGATGAGTTCTTTCAGTCAACTGCAGGTGTACATTTATTTTTCTTCTTCTGTCTTTTTTATTTGGTGTGTTTACCATTGCTTTTGAAAAACGTGTATTGAAGATTAGCAGTTGCGAAGAAAATGAGTTAATGCTAAGAACTCTGTAATAGCCCAAGCCCACCTCTAGCAAATATTGTCGTTTTTGAGTTTTCCCTTTTGGGTTTCCCATCAAGGTTTTTAAATGGGTCTCCTTAACGGATTTAAGATCTCTTTAATCTATTTTTGGAAACTTCTTAACCACTTTTAATTAGAATACTACTCATTCCACAAATGGTCATGCAGGAAAGTTTAAGACAGAGCTGGGACGAGCTTGGGCAGCTGAAATAGTATCAAGGAGAAGAAGGGATGTTGATAATGGCACTACAGCCAACACTTCAGTGAACTAACATACCAATTCACAGCCACAAATTGAGGTTACATTTCGAAAACTACTGTCATTGATGATCATTATATGCAATTTTTTTGTTGTTTTTCCTTAGACCTTAGAGGACATGGTTGTAGAACCTATGCAATAGATTCCGTTGTAACTGTATGCAATTTATTGTTGAATGGCAAAAAACCATGTTTACTTCA TGAATTCGATTACGTGTTTGGAAATTGGAAATCGGTCTCATTGCTTTCCCCAATCGTCTTCTGCAGTCGCCGGAACTGAATATCGCCGCCTTCGTTTATGGCAACTGAAGAAGCTCCTTCCTCTTCGACGCCTGTCGACGGCGGCGCTCATCTTACTCCTCCTCCTTCCACTGACATAGCAGCTTCTGCTTCTTCGGCCATTGATTTTCTCACCCTCTGTCAGCGCCTCAAGACAACGAAAAGAACTGGATGGATTTATAAAAGAGTCAAGGATCCGGAATCCATAGCAGATCATATGTACCGAATGGGAATAATGGCGCTCATCAGTTCCGATATTCCGGGCGTCGATAGAGACAAGTGCATAAAAATGGCAATTGTTCATGACATTGCAGAAGCAATTGTTGGTGACATTACCCCATTTGATGGGGTTTCAAAGTTGGAAAAGAATAGAAGAGAACAAGAAGCACTAGACCACATGTGCAAATTGCTTGGTGGTGGTTCAAGAGCCAAGGAAATCGGTGAATTGTGGATGGAGTATGAGAATACTAGTTCGCCAGAAGCTGAAATTGTGAAGGATCTTGATAAGGTGGAGATGATTCTTCAAGCTCTAGAATATGAAAATGAGCAAGGGAAGGATTTGGATGAGTTCTTTCAGTCAACTGCAGGAAAGTTTAAGACAGAGCTGGGACGAGCTTGGGCAGCTGAAATAGTATCAAGGAGAAGAAGGGATGTTGATAATGGCACTACAGCCAACACTTCAGTGAACTAACATACCAATTCACAGCCACAAATTGAGGTTACATTTCGAAAACTACTGTCATTGATGATCATTATATGCAATTTTTTTGTTGTTTTTCCTTAGACCTTAGAGGACATGGTTGTAGAACCTATGCAATAGATTCCGTTGTAACTGTATGCAATTTATTGTTGAATGGCAAAAAACCATGTTTACTTCA ATGGCAACTGAAGAAGCTCCTTCCTCTTCGACGCCTGTCGACGGCGGCGCTCATCTTACTCCTCCTCCTTCCACTGACATAGCAGCTTCTGCTTCTTCGGCCATTGATTTTCTCACCCTCTGTCAGCGCCTCAAGACAACGAAAAGAACTGGATGGATTTATAAAAGAGTCAAGGATCCGGAATCCATAGCAGATCATATGTACCGAATGGGAATAATGGCGCTCATCAGTTCCGATATTCCGGGCGTCGATAGAGACAAGTGCATAAAAATGGCAATTGTTCATGACATTGCAGAAGCAATTGTTGGTGACATTACCCCATTTGATGGGGTTTCAAAGTTGGAAAAGAATAGAAGAGAACAAGAAGCACTAGACCACATGTGCAAATTGCTTGGTGGTGGTTCAAGAGCCAAGGAAATCGGTGAATTGTGGATGGAGTATGAGAATACTAGTTCGCCAGAAGCTGAAATTGTGAAGGATCTTGATAAGGTGGAGATGATTCTTCAAGCTCTAGAATATGAAAATGAGCAAGGGAAGGATTTGGATGAGTTCTTTCAGTCAACTGCAGGAAAGTTTAAGACAGAGCTGGGACGAGCTTGGGCAGCTGAAATAGTATCAAGGAGAAGAAGGGATGTTGATAATGGCACTACAGCCAACACTTCAGTGAACTAA MATEEAPSSSTPVDGGAHLTPPPSTDIAASASSAIDFLTLCQRLKTTKRTGWIYKRVKDPESIADHMYRMGIMALISSDIPGVDRDKCIKMAIVHDIAEAIVGDITPFDGVSKLEKNRREQEALDHMCKLLGGGSRAKEIGELWMEYENTSSPEAEIVKDLDKVEMILQALEYENEQGKDLDEFFQSTAGKFKTELGRAWAAEIVSRRRRDVDNGTTANTSVN Homology
BLAST of Carg16412 vs. NCBI nr
Match: KAG6586032.1 (5'-deoxynucleotidase HDDC2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020808.1 HD domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441.4 bits (1134), Expect = 4.5e-120 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Carg16412 vs. NCBI nr
Match: XP_022937603.1 (HD domain-containing protein 2-like [Cucurbita moschata]) HSP 1 Score: 438.0 bits (1125), Expect = 5.0e-119 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Carg16412 vs. NCBI nr
Match: XP_023536851.1 (HD domain-containing protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 432.6 bits (1111), Expect = 2.1e-117 Identity = 218/223 (97.76%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of Carg16412 vs. NCBI nr
Match: XP_022969683.1 (HD domain-containing protein 2-like [Cucurbita maxima]) HSP 1 Score: 429.1 bits (1102), Expect = 2.3e-116 Identity = 217/220 (98.64%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Carg16412 vs. NCBI nr
Match: XP_022946923.1 (HD domain-containing protein 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 398.3 bits (1022), Expect = 4.4e-107 Identity = 199/223 (89.24%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy Swiss-Prot
Match: Q1LUI2 (5'-deoxynucleotidase HDDC2 OS=Danio rerio OX=7955 GN=hddc2 PE=2 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43 Identity = 90/160 (56.25%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy Swiss-Prot
Match: Q0P565 (5'-deoxynucleotidase HDDC2 OS=Bos taurus OX=9913 GN=HDDC2 PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.7e-40 Identity = 86/173 (49.71%), Postives = 121/173 (69.94%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy Swiss-Prot
Match: Q3SXD3 (5'-deoxynucleotidase HDDC2 OS=Mus musculus OX=10090 GN=Hddc2 PE=1 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.7e-40 Identity = 88/170 (51.76%), Postives = 122/170 (71.76%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy Swiss-Prot
Match: Q66L17 (5'-deoxynucleotidase HDDC2 OS=Xenopus laevis OX=8355 GN=hddc2 PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.8e-40 Identity = 86/196 (43.88%), Postives = 135/196 (68.88%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy Swiss-Prot
Match: Q7Z4H3 (5'-deoxynucleotidase HDDC2 OS=Homo sapiens OX=9606 GN=HDDC2 PE=1 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 3.7e-40 Identity = 85/164 (51.83%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy TrEMBL
Match: A0A6J1FGF7 (5'-deoxynucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111443961 PE=3 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 2.4e-119 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy TrEMBL
Match: A0A6J1I1P9 (5'-deoxynucleotidase OS=Cucurbita maxima OX=3661 GN=LOC111468637 PE=3 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 1.1e-116 Identity = 217/220 (98.64%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy TrEMBL
Match: A0A6J1G552 (5'-deoxynucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111450859 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107 Identity = 199/223 (89.24%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy TrEMBL
Match: A0A6J1KI11 (5'-deoxynucleotidase OS=Cucurbita maxima OX=3661 GN=LOC111494015 PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 6.2e-107 Identity = 197/223 (88.34%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Carg16412 vs. ExPASy TrEMBL
Match: A0A6J1DH88 (5'-deoxynucleotidase OS=Momordica charantia OX=3673 GN=LOC111020874 PE=3 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103 Identity = 196/223 (87.89%), Postives = 205/223 (91.93%), Query Frame = 0
BLAST of Carg16412 vs. TAIR 10
Match: AT2G23820.2 (Metal-dependent phosphohydrolase ) HSP 1 Score: 307.8 bits (787), Expect = 7.3e-84 Identity = 153/210 (72.86%), Postives = 177/210 (84.29%), Query Frame = 0
BLAST of Carg16412 vs. TAIR 10
Match: AT2G23820.1 (Metal-dependent phosphohydrolase ) HSP 1 Score: 279.6 bits (714), Expect = 2.1e-75 Identity = 140/192 (72.92%), Postives = 159/192 (82.81%), Query Frame = 0
BLAST of Carg16412 vs. TAIR 10
Match: AT1G26160.1 (Metal-dependent phosphohydrolase ) HSP 1 Score: 271.2 bits (692), Expect = 7.6e-73 Identity = 134/188 (71.28%), Postives = 157/188 (83.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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