Carg16399 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16399
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PXMP2/4 family protein 4-like
Location	Carg_Chr12: 3561600 .. 3565787 (+)
RNA-Seq Expression	Carg16399
Synteny	Carg16399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGCTTGCGTCGACGTTGTGGCTTGCTTCTGCGGCCGGTCGCTGCCCGTATCAACGTAATCCCCAAAGCTACCGTCTCTTCTAAGATTCACTGGAGGGCGTATTTCAGTTTCATTTCATCTCCAATGGGATTCAGAATTAGAGAAAGTAAAATTTCATGCCAATCTTTCTTGCCTTCGTCTCGGCATCGATTCTCTTCCTTCTCTTCTCCATTGAAATCAGGCACTGGAGTTATCCGATGGTATTTAAGGAAACTCGACACCTACCCGTTTATCACTAAAAGTATCAGTTCTTCGCTCATTTATGTGGCTGCTGATCTAACCTCTCAGGTACAAGATGGTTTTTATGTTTGCATGCAATTCATTTCCGCATTCTTTCGAAATTATTTGGAATTCAGGATACAGTTCGTGAAAAAACGAGATCGATTATCCGATAACTATACGAGAAGACACCACCTCTCCCTTAAATGAGGTGGTTTCGTATAAAAGATCATTTACATGCAGAAATGATGTTTGGTCGTTACTATCTTTGTGCTTGAAATCTTGAGTAGTTGCATTTTGTTGATGTATATAACAATTTGAAGTAGCTTAAGTTCAACAAATCGACATTTAAGCACCTTCTGCCAAGATTTATGTTATAAATACTGTAGGTTTTAGGGTTGGGCAGTTGTCATTCATGGGATGATTTGTGTTGAAAATTTATGAGAGGACAAATCTCATTGTGATATATTTGGTTTACTTGTTCAACTTTCATCAGTTTTCTATTACACCCGTTGTTGAAATAGCAACACCCTTCACAATTACCTTTCTTATACCCTCTTGTTCTGGTTAATTTTGTCTTCTAATTGTTTGGTTTATATCAAATTTTGTCAGATGATTACATTGCCATCTCCTGGCTCTTTTGATTTAATAAGGACAACACGGATGGCTGCTTATGGATTGCTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCCACGGTCTCACCAAGGCGAGATTATTTGTCAACTTTCAAGAAGATTGTTCTAGGGCAGGCTGTGTACGGACCTACTCTTACCTCTATTTTCTTCTCCTATAATGCATCTTTGCAAGGTAATCAGAAAGCTGAAGTTGTAGAACTTCAGATAATTTTTAGCTAAAAATCACTTTTTATCCTTGAACTTAAAAGTAACTGTTTAGTCTCTGAGCATTGATTTGTGACAATTTAGTTCCTCTGCTTTCAAATTTATAACCCTTTGGCCCCAAAACTTTAGAATGTAACAACTTTAAGATTTGTAGCAATTTAACGGAACTTCTCATTTGGGTAGATCAATAAACCAATTAGGGACCTAATATGTTTATAAGCTACAAAGTCTAAATCTAATAAAAATCGACATTTAATTTTTATGGATTCTTTTACGGCATGATTAAATTCTTGCAAATTTATCTGTATAAATTAACAGTAGATGGACTAAATTGTTACAAATTAAAGTTTGGAGACTAAATTGTCACTTCCATGAGAGTTTAGGGAGGAACCAAAAGTGATTTTTCATTATCTTGCCATAGGTGGCTTGCTTTGATGACCTCCACCCTGGTTTCTTCAACTTCATTGTTAGATGCTTTGATGGAGTGTTCTAATGGATTTTTGGGTCCCCTGTTGTGCACATTTATGAAGTGTGGATTAAGATAGGTGTTTAACTATCAAATGCTGGGCCTTGGTCTTTAGTGCTGAAATTAGAGTGTTCCTTTTTGCTATCAGTATTTGTTACATTTTTCTTGCTATGGTTGGAGGCTTTTGATGACTGCTATCTGGCTTCATCTAGTTCATAATTCTGTTGATAATGAAGTTCTATAATTTATCGAGGCCCCCTTTGGAGAACTAGAGGTAAGTGGGTTGGTTCTATTTGGTTCCATTCTCCTAGAAAGCCAGTATCCGTGCTAGTTTTCTGCTTTTCTTGGACCAATCGGTCTCTATGGCATTAGATTGAGCCATTAAGTCCAACGCCAAGCAGATGTATTAGTTGAAGAAAATTTGAAAACTGGTGCAATATCTAACTTTTTGGAAAATGGAACCAATCAAAACCAATCAAAATGAACCGACCGACTAATTTTTTTCTGGAATATTATGGAATCAAACTAGCCAACATCATGTGTGTTGGTTTAACGTCTGGAACTGAATAAGTTTTTTCACCCGAACGTTTATAAGATGTAGATTAAGAAGATTTCTTATTATCTGCTAATTCTGTGTCGTTTATGCTGAAATCCGTAGCCTCCTAGTTGTAGTCCATATTTAGCCTACTGGCTTCTACAGCTTGGCATTTGTTACATTCCTCGAAGTCGACCACTTTCTCTCGAAGTACATTCTGTAGTTGATTTATTACTCGTGTCTTATAATCCATATGCATCTCGTAATCTGGAAATAATATTATTTAGAACAAATATATTCTGATATTGCTCGCTTCTAAATGCATTATTTCCAAATTCAGGTGAAAGTGGCAGTGAGATTGCTGCTAGATTACAGCGAGATTTACTTCCAACATTGTTAAATGGACTCTTGTTTTGGCCAGTCTGCGATTTTCTCACATACAAATTTGTCCCCGTTCATCTACAGGTACGTTCCCATCACATCCAGACATAAAAAGAGGAATCCTTATATCATATACAAGATGCCACAGTCTAGTCTAGTCTTTGTTTTGATTGCTCTCAGCATAGTCGTTTGCTCATTTTTCAACCAAACAGATAGAACTCTAAATCCGTTTTTGGGCGTCGATTTTGCAGCCATTGACAAACAGTTCGTTCGCATATATATGGACCATTTATCTGACATACATGGCTAGCTTAAAAGGAGTTGACATGAATTGAAGCAGTAGTAGATTTGAAGAGACTGCCTTTTGTTTTCATGGCTTGTTTAGCAACTACCTCTATGAAGCAGAAGGCTTCCATATAGTGCTCGGTAAGTAAAGCACTTCCAACTCTTCTACTCGGCTGGATTTAAGCATTGATTATTGCAAATACGTAAAATCTTGGGGATGGGATGGGATTAAGAGACATTTTGACTATGATTCCAATGTTTCATTTATAAATATGTCTGATCCCAATGATTTTGAGATGATTCAATCTGTTTATGTTGCTGTAAATGTGACTGCTGATTTCCACCGCCCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTTTCCTCAAGACTTTAAAACGCGTCTATTAGGGAAAGGTTTTCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGATAACCCAATCCACTCCCTTCAGAGCCCAGCGTCCTCGTTGGCACTTGTTCCTCTCTCCAATCGACGTGGGACCTCCACCAAATCCACTCCCTTCGAGACCCAGCGTCCTTACTGGCACACCACCTCGTGTCTACCCCCTTTGGGAAACAGTCTCCTCGTTGACACATTGCCCGGTGTCAGGATCTAATACCATTTGAAAAGGCCCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGCTTTCCCTCTTGGGCTTCCCCTCAAGAATTTAAAACGCCTTTGCTAAGTAAAGGTTTCCACACCCTTATAAAAGGTGTTTCGTTCTCTTCCCCAATCAGCGTGTGATATCACAAGCAATTACTCCTCATTGCCTTTAAGTTGTAACTTTAAATGTGTTGCCCCCTTTTTATGTAACTTGTGAATGGCTCTTATAATTCACAAACAGCACTAAATTTGTGTGTCCTGCTGCCACAAAATAACAGAGGGCCTTCAATTCAAGGGCTTCTCTTAACTCGCGTGACGGCCTGCCGTGCATTTGCTGTATGTTTGATCGTGTAATTTTAATGGCGATGTGTCAGACTCATATAGAATCAGCCACGAGTTTATGTGTTTTTGATATATGAAATTAAATTTTAATAAAGTTACAATATGCTTTTAAATTTTAATTTCTACAATCAATTTAACAATTCTAACACAATGCTCGTTTCTCTTTTCAGGTACAGTTGATTACGAGGATTTGAACCTTAGACCTTACGTGAAGAAATACTAAGCTCACTTTGACCTAATGAAATACTTGATTTGATACGTTTATTAGATAAATTTTGATTAAATTAGTGTGACGTGTTAAAACCTCTAGACTTTGGTACAACTTTAATTAAAAGTAGCAAAATAATTGTTCATT

mRNA sequence

ATGAATAGCTTGCGTCGACGTTGTGGCTTGCTTCTGCGGCCGGTCGCTGCCCGTATCAACGTAATCCCCAAAGCTACCGTCTCTTCTAAGATTCACTGGAGGGCGTATTTCAGTTTCATTTCATCTCCAATGGGATTCAGAATTAGAGAAAGTAAAATTTCATGCCAATCTTTCTTGCCTTCGTCTCGGCATCGATTCTCTTCCTTCTCTTCTCCATTGAAATCAGGCACTGGAGTTATCCGATGGTATTTAAGGAAACTCGACACCTACCCGTTTATCACTAAAAGTATCAGTTCTTCGCTCATTTATGTGGCTGCTGATCTAACCTCTCAGATGATTACATTGCCATCTCCTGGCTCTTTTGATTTAATAAGGACAACACGGATGGCTGCTTATGGATTGCTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCCACGGTCTCACCAAGGCGAGATTATTTGTCAACTTTCAAGAAGATTGTTCTAGGGCAGGCTGTGTACGGACCTACTCTTACCTCTATTTTCTTCTCCTATAATGCATCTTTGCAAGGTGAAAGTGGCAGTGAGATTGCTGCTAGATTACAGCGAGATTTACTTCCAACATTGTTAAATGGACTCTTGTTTTGGCCAGTCTGCGATTTTCTCACATACAAATTTGTCCCCGTTCATCTACAGCCATTGACAAACAGTACAGTTGATTACGAGGATTTGAACCTTAGACCTTACGTGAAGAAATACTAAGCTCACTTTGACCTAATGAAATACTTGATTTGATACGTTTATTAGATAAATTTTGATTAAATTAGTGTGACGTGTTAAAACCTCTAGACTTTGGTACAACTTTAATTAAAAGTAGCAAAATAATTGTTCATT

Coding sequence (CDS)

ATGAATAGCTTGCGTCGACGTTGTGGCTTGCTTCTGCGGCCGGTCGCTGCCCGTATCAACGTAATCCCCAAAGCTACCGTCTCTTCTAAGATTCACTGGAGGGCGTATTTCAGTTTCATTTCATCTCCAATGGGATTCAGAATTAGAGAAAGTAAAATTTCATGCCAATCTTTCTTGCCTTCGTCTCGGCATCGATTCTCTTCCTTCTCTTCTCCATTGAAATCAGGCACTGGAGTTATCCGATGGTATTTAAGGAAACTCGACACCTACCCGTTTATCACTAAAAGTATCAGTTCTTCGCTCATTTATGTGGCTGCTGATCTAACCTCTCAGATGATTACATTGCCATCTCCTGGCTCTTTTGATTTAATAAGGACAACACGGATGGCTGCTTATGGATTGCTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCCACGGTCTCACCAAGGCGAGATTATTTGTCAACTTTCAAGAAGATTGTTCTAGGGCAGGCTGTGTACGGACCTACTCTTACCTCTATTTTCTTCTCCTATAATGCATCTTTGCAAGGTGAAAGTGGCAGTGAGATTGCTGCTAGATTACAGCGAGATTTACTTCCAACATTGTTAAATGGACTCTTGTTTTGGCCAGTCTGCGATTTTCTCACATACAAATTTGTCCCCGTTCATCTACAGCCATTGACAAACAGTACAGTTGATTACGAGGATTTGAACCTTAGACCTTACGTGAAGAAATACTAA

Protein sequence

MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLPSSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGSFDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDYEDLNLRPYVKKY

Homology

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BLAST of Carg16399 vs. NCBI nr
Match: KAG7020601.1 (PXMP2/4 family protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 501.9 bits (1291), Expect = 3.2e-138
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP
Sbjct: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS
Sbjct: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDYED 240
           SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDYED
Sbjct: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDYED 240

Query: 241 LNLRPYVKKY 251
           LNLRPYVKKY
Sbjct: 241 LNLRPYVKKY 250

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BLAST of Carg16399 vs. NCBI nr
Match: XP_022951025.1 (PXMP2/4 family protein 4-like [Cucurbita moschata] >XP_022951026.1 PXMP2/4 family protein 4-like [Cucurbita moschata])

HSP 1 Score: 467.6 bits (1202), Expect = 6.6e-128
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSF SSPMGFRIRESKISCQSFLP
Sbjct: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFRSSPMGFRIRESKISCQSFLP 60

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS
Sbjct: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNS+  Y
Sbjct: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSSFAY 238

[Close]

BLAST of Carg16399 vs. NCBI nr
Match: KAG6585699.1 (PXMP2/4 family protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 451.8 bits (1161), Expect = 3.8e-123
Identity = 239/313 (76.36%), Postives = 243/313 (77.64%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSF SSPMGFRIRESKISCQS LP
Sbjct: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFRSSPMGFRIRESKISCQSILP 60

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           SSRHRFSSFSSPLKSGTGVIRWYLRKLD++PFITKSISSSLIYVAADLTSQMITLPSPGS
Sbjct: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDSHPFITKSISSSLIYVAADLTSQMITLPSPGS 120

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRMAAYGLLILGPSQHLWFNFMST+SPRRDYLSTFKKI LGQAVYGPTLTSIFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTISPRRDYLSTFKKIFLGQAVYGPTLTSIFF 180

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQP---------- 240
           SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQ           
Sbjct: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQSSLVFVLIALS 240

Query: 241 -----------------------------------------------------LTNSTVD 251
                                                                +   TVD
Sbjct: 241 IVVCSFFNQTDRTLNPFLDVDFAAIDKHSRFEETAFCFHGLFSNYLYEAEGFHIVLGTVD 300

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BLAST of Carg16399 vs. NCBI nr
Match: XP_023538047.1 (PXMP2/4 family protein 4-like [Cucurbita pepo subsp. pepo] >XP_023538048.1 PXMP2/4 family protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.7 bits (1158), Expect = 8.4e-123
Identity = 225/238 (94.54%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           MNSL RRCGLL+RPVAARINVIPKATVSSKI WRAYFSF SSPMGFRIRESKISCQS LP
Sbjct: 1   MNSLCRRCGLLVRPVAARINVIPKATVSSKIQWRAYFSFRSSPMGFRIRESKISCQSILP 60

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           SSRHRFSSFSSPLKSGTGVIRWYLRKLD++PFITKSISSSLIYVAADLTSQMITLPSPGS
Sbjct: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDSHPFITKSISSSLIYVAADLTSQMITLPSPGS 120

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRMAAYGLLILGPSQHLWFNFMST+SPRRDYLSTFKKI LGQAVYGPTLTSIFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTISPRRDYLSTFKKIFLGQAVYGPTLTSIFF 180

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           SYNASLQGESGSEI ARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNS+  Y
Sbjct: 181 SYNASLQGESGSEIGARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSSFAY 238

[Close]

BLAST of Carg16399 vs. NCBI nr
Match: XP_023002127.1 (protein SYM1-like [Cucurbita maxima] >XP_023002128.1 protein SYM1-like [Cucurbita maxima])

HSP 1 Score: 443.7 bits (1140), Expect = 1.0e-120
Identity = 222/238 (93.28%), Postives = 226/238 (94.96%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           MNSL RRCGLLLRPVAARINV PKATV SKI WRAYFSF SSPMGFRIR SKISCQS  P
Sbjct: 1   MNSLCRRCGLLLRPVAARINVSPKATVPSKIQWRAYFSFRSSPMGFRIRGSKISCQSIFP 60

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           SSRH+FSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS
Sbjct: 61  SSRHQFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRMAAYGLLILGPSQHLWFNFMST+SPR+DYLSTFKKI LGQAVYGPTLTSIFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTISPRQDYLSTFKKIFLGQAVYGPTLTSIFF 180

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           SYNASLQGESGSEI ARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNS+  Y
Sbjct: 181 SYNASLQGESGSEIGARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSSFAY 238

[Close]

BLAST of Carg16399 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.0e-19
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 83  YLRKLDTYPFITKSISSSLIYVAADLTSQMITL--PSPGSFDLIRTTRMAAYGLLILGPS 142
           YL +L  YP  TK+++S  +Y+ +D   Q I L       +D  R+ RMA +G  + GP 
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPL 74

Query: 143 QHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASLQGESGSEIAARLQR 202
            H WF ++    P++ Y   F K+ + Q V  P    +FFS    L+G+S  +I  +L++
Sbjct: 75  FHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKK 134

Query: 203 DLLPTLLNGLLFWPVCDFLTYKFV 225
           D L T ++  + WP  +F+ + ++
Sbjct: 135 DWLTTYVSDCVVWPFINFVNFAYI 158

[Close]

BLAST of Carg16399 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12
Identity = 47/172 (27.33%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 68  SFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGSFDLIRTT 127
           S S PL     V  WY++KL + P  TK+++S+ +   + + +Q        +++ +   
Sbjct: 2   SNSKPLSLTDAVTTWYMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAV--V 61

Query: 128 RMAAYGLLILGPSQHLWFNFMSTVSPR-RDYLSTFKKIVLGQAVYGPTLTSIFFSYNASL 187
           +   +G LI  P  H W   +  +    +D   ++ K+++ Q V+ P +   F+S  A L
Sbjct: 62  KFTVWG-LISSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLAIL 121

Query: 188 QGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
            G+  S I  +L  DL PTL      WP+   + ++FVP HL+ L  + V +
Sbjct: 122 DGKPKS-ILFKLYFDLFPTLKASWKVWPLAQLINFRFVPSHLRVLFGNLVGF 169

[Close]

BLAST of Carg16399 vs. ExPASy Swiss-Prot
Match: Q2TXA2 (Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sym1 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.7e-12
Identity = 43/160 (26.88%), Postives = 76/160 (47.50%), Query Frame = 0


Query: 79  VIRWYLRKLDTYPFITKSISSSLIYVAAD-LTSQMITLPSPGSFDLIRTTRMAAYGLLIL 138
           + RWY  KL   P +T S++S++++ + D L  Q++        D  RT RMA YG  I 
Sbjct: 1   MFRWYQAKLAKQPILTASVTSAVLFGSGDVLAQQVVDRKGLEKHDFARTGRMALYGGAIF 60

Query: 139 GPSQHLWFNFMS-TVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASLQGESGSEIAA 198
           GP+   WF F+   V  +    +   ++   Q ++ PT  + F +  A ++   GS+   
Sbjct: 61  GPAATTWFGFLQRNVVLKNSKATIVARVAADQCLFTPTHLTCFLTSMAIME---GSDPIE 120

Query: 199 RLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTV 237
           + +   LP+    L  WP+   + +  VP+  + L  + V
Sbjct: 121 KWRNSFLPSYKANLTIWPLVQGVNFSIVPLEYRVLVVNLV 157

[Close]

BLAST of Carg16399 vs. ExPASy Swiss-Prot
Match: Q66GV0 (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.8e-11
Identity = 38/151 (25.17%), Postives = 69/151 (45.70%), Query Frame = 0


Query: 78  GVIRWYLRKLDTYPFITKSISS-SLIYVAADLTSQMITLPSPGSFDLIRTTRMAAYGLLI 137
           G+ R Y R L  +P+  + +++ SL+ V   ++ Q++         + RT +M   G   
Sbjct: 3   GLWRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCF 62

Query: 138 LGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASLQGESGSEIAA 197
           +GP    W+  +  + P        KK++L Q  + P     F S  ++L G SG +I  
Sbjct: 63  VGPVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLSIASALNGLSGEQIWG 122

Query: 198 RLQRDLLPTLLNGLLFWPVCDFLTYKFVPVH 228
           +L+RD    L+     WP      + F+P++
Sbjct: 123 KLKRDYKDALITNYYIWPAVQVANFYFIPLY 153

[Close]

BLAST of Carg16399 vs. ExPASy Swiss-Prot
Match: P0CQ39 (Protein SYM1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-10
Identity = 41/161 (25.47%), Postives = 76/161 (47.20%), Query Frame = 0


Query: 78  GVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGSFDLIRTTRMAAYGLLIL 137
           G++  Y   L   P +   ISS++++   D+ +Q +        DL RT R+  +G ++ 
Sbjct: 3   GLMGKYAAFLTRRPVLGNMISSAVLFGTGDVIAQQLIEKKGADHDLPRTARIVTWGGILF 62

Query: 138 GPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASLQGESGSEIAAR 197
            P+ +LWF  +  +  R  + +TF ++ L Q  + P + S FF+    ++G+  +    +
Sbjct: 63  APTVNLWFRTLERIPIRSRWPATFARVGLDQFGFAPVILSGFFTAMTFMEGKDFNAAKVK 122

Query: 198 LQRDLLPTL-LNGLLFWPVCDFLTYKFVPVHLQPLTNSTVD 238
                 PTL  N +LF P    L    VP+  + L  + V+
Sbjct: 123 WHESFFPTLQANWMLFIPF-QILNMGLVPLQYRLLAVNAVN 162

[Close]

BLAST of Carg16399 vs. ExPASy TrEMBL
Match: A0A6J1GGF6 (PXMP2/4 family protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453999 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSF SSPMGFRIRESKISCQSFLP
Sbjct: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFRSSPMGFRIRESKISCQSFLP 60

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS
Sbjct: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNS+  Y
Sbjct: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSSFAY 238

[Close]

BLAST of Carg16399 vs. ExPASy TrEMBL
Match: A0A6J1KSN2 (protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111496083 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.0e-121
Identity = 222/238 (93.28%), Postives = 226/238 (94.96%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           MNSL RRCGLLLRPVAARINV PKATV SKI WRAYFSF SSPMGFRIR SKISCQS  P
Sbjct: 1   MNSLCRRCGLLLRPVAARINVSPKATVPSKIQWRAYFSFRSSPMGFRIRGSKISCQSIFP 60

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           SSRH+FSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS
Sbjct: 61  SSRHQFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRMAAYGLLILGPSQHLWFNFMST+SPR+DYLSTFKKI LGQAVYGPTLTSIFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTISPRQDYLSTFKKIFLGQAVYGPTLTSIFF 180

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           SYNASLQGESGSEI ARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNS+  Y
Sbjct: 181 SYNASLQGESGSEIGARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSSFAY 238

[Close]

BLAST of Carg16399 vs. ExPASy TrEMBL
Match: A0A6J1BSL7 (PXMP2/4 family protein 4 OS=Momordica charantia OX=3673 GN=LOC111005169 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.3e-100
Identity = 192/243 (79.01%), Postives = 205/243 (84.36%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRP-----VAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISC 60
           MNSL RRCG LLRP     + A IN    A+VSSKI WRAYFSF  S   FRIR +KISC
Sbjct: 1   MNSLYRRCGWLLRPADPRFIVAHINXNTNASVSSKIQWRAYFSFSPSSTCFRIRGNKISC 60

Query: 61  QSFLPSSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITL 120
            S  PS+ H FSS SS  K  TG + WYLRKLDT+PFITKSI+SSLIY AADLTSQMITL
Sbjct: 61  PSNSPSTSHPFSSSSSLSKPRTGFVGWYLRKLDTHPFITKSITSSLIYAAADLTSQMITL 120

Query: 121 PSPGSFDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTL 180
           PSPGSFDLIRTTRMAAYGLLILGPSQHLWFN MST+SP+RD LSTFKKI LGQAVYGPT+
Sbjct: 121 PSPGSFDLIRTTRMAAYGLLILGPSQHLWFNVMSTISPKRDMLSTFKKIFLGQAVYGPTI 180

Query: 181 TSIFFSYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNST 239
           TSIFFSYNASLQGESGSEIAARL+RDLLPTL+NGLLFWPVCDFLTYKFVPVHLQPLTNS+
Sbjct: 181 TSIFFSYNASLQGESGSEIAARLKRDLLPTLMNGLLFWPVCDFLTYKFVPVHLQPLTNSS 240

[Close]

BLAST of Carg16399 vs. ExPASy TrEMBL
Match: A0A6J1HHJ7 (PXMP2/4 family protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463001 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.1e-99
Identity = 180/238 (75.63%), Postives = 204/238 (85.71%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           +NSLRRRCG LLRPV A I+   KA+VS+KI WR+YFSF SSPM FR+RESK+ C + L 
Sbjct: 2   VNSLRRRCGWLLRPVVAHIDTTTKASVSAKIRWRSYFSFGSSPMRFRVRESKVPCPTILE 61

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           + R+RF S  S  KS  G + WY+RKLDT+PFITKSI+SSLIY A+DLTSQMIT+PSPGS
Sbjct: 62  TIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGS 121

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
           FDLIRTTRM AYGLLILGPSQHLWFNFMST+SP RD LSTFKK+ LGQAVYGP +TS+FF
Sbjct: 122 FDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFF 181

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           SYNASLQGESG EIAARL RDLLPT+LNGLL+WPVCDF+TYKFVPVHLQPL NS+  Y
Sbjct: 182 SYNASLQGESGREIAARLNRDLLPTMLNGLLYWPVCDFVTYKFVPVHLQPLINSSFQY 239

[Close]

BLAST of Carg16399 vs. ExPASy TrEMBL
Match: A0A6J1K760 (PXMP2/4 family protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111492264 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.2e-98
Identity = 180/238 (75.63%), Postives = 203/238 (85.29%), Query Frame = 0


Query: 1   MNSLRRRCGLLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLP 60
           +NSLRRRCG LLRPV A I++  KA+VS+KI WR+YFSF SSPM FR+RESKI C + L 
Sbjct: 2   VNSLRRRCGWLLRPVVAHIDITTKASVSAKIRWRSYFSFGSSPMRFRVRESKIPCPTILE 61

Query: 61  SSRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGS 120
           + R+RF S  S  KS  G + WY+RKLDT+PFITKS +SSLIY A+DLTSQMIT+PSPGS
Sbjct: 62  TIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSFTSSLIYAASDLTSQMITMPSPGS 121

Query: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFF 180
            DLIRTTRM AYGLLILGPSQHLWFNFMST+SP RD LSTFKK+ LGQAVYGP +TS+FF
Sbjct: 122 VDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFF 181

Query: 181 SYNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           SYNASLQGESG EIAARL RDLLPT+LNGLL+WPVCDFLTYKFVPVHLQPL NS+  Y
Sbjct: 182 SYNASLQGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQPLINSSFQY 239

[Close]

BLAST of Carg16399 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64
Identity = 109/177 (61.58%), Postives = 146/177 (82.49%), Query Frame = 0


Query: 62  SRHRFSSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGSF 121
           SR+  +  SS        +RWYLRKL+++PF+TKSI++S+IY+AADLTSQMIT+   GSF
Sbjct: 61  SRNLTTKASSSSSKQPAFLRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSF 120

Query: 122 DLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFS 181
           DLIRT RMA++GL+ LGPSQHLWF+++S + P+RD L+TFKKI++GQ ++GP   ++F+S
Sbjct: 121 DLIRTARMASFGLIFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYS 180

Query: 182 YNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           YNA+LQGE+  EI ARL+RDLLPTL NGL++WPVCDF+T+K+VPVHLQPL NS+  Y
Sbjct: 181 YNAALQGENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAY 237

[Close]

BLAST of Carg16399 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 221.5 bits (563), Expect = 7.7e-58
Identity = 115/229 (50.22%), Postives = 155/229 (67.69%), Query Frame = 0


Query: 10  LLLRPVAARINVIPKATVSSKIHWRAYFSFISSPMGFRIRESKISCQSFLPSSRHRFSSF 69
           L+ R  AA  +   K  V+     R YF   S  +  R +E+ +S     PS    FSS 
Sbjct: 16  LIRRNAAASTDQYGKTGVAQS---RPYFR--SRQLLERAKETGVS-----PSPSLGFSSS 75

Query: 70  SSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGSFDLIRTTRM 129
           SSP  S  G + WYL  + ++P +TKS++SSLIY+AADL+SQ I   S  S+DL+RT RM
Sbjct: 76  SSP--SRIGFVGWYLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARM 135

Query: 130 AAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASLQGE 189
             YGL +LGP+ H WFNFMS + P++D ++TFKK+ +GQ +YGP +T IFFS NASLQGE
Sbjct: 136 GGYGLFVLGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGE 195

Query: 190 SGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
            GS I ARL+RDLLP L NG+++WP+CDF+T++F PVHLQPL +++  Y
Sbjct: 196 RGSVILARLKRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSY 232

[Close]

BLAST of Carg16399 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.0e-57
Identity = 101/172 (58.72%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 67  SSFSSPLKSGTGVIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGSFDLIRT 126
           SS SS   S  G I WYL  + + P +TKS++SSLIY+AADL+SQ I   S  S+DL+RT
Sbjct: 70  SSSSSSTVSTAGFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRT 129

Query: 127 TRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASL 186
            RM  YGLLILGP+ H WFN MS++ P+RD ++TFKK+ +GQ VYGP +  +FFS NA+L
Sbjct: 130 ARMGGYGLLILGPTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAAL 189

Query: 187 QGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTVDY 239
           QGE+GSEI ARL+RDLLPT+LNG+++WP+CDF+T+KF PV+LQPL +++  Y
Sbjct: 190 QGENGSEIVARLKRDLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSY 241

[Close]

BLAST of Carg16399 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 81.6 bits (200), Expect = 9.6e-16
Identity = 43/158 (27.22%), Postives = 80/158 (50.63%), Query Frame = 0


Query: 79  VIRWYLRKLDTYPFITKSISSSLIYVAADLTSQMITLPSPGSFDLIRTTRMAAYGLLILG 138
           ++ WY   L   P +TK+++++L+ +  DL  Q +T+    S D  RT      GL ++G
Sbjct: 114 LLSWYQALLSNSPVLTKAVTAALLNLVGDLICQ-LTINKTSSLDKKRTLTFTFLGLGLVG 173

Query: 139 PSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFSYNASLQGESGSEIAARL 198
           P+ H W+ ++S V           +++L Q V+ P    +F S   +L+G+  S +  +L
Sbjct: 174 PTLHFWYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKP-SNVIPKL 233

Query: 199 QRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQPLTNSTV 237
           Q++    ++     W    FL ++FVP + Q L ++ V
Sbjct: 234 QQEWTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVV 269

[Close]

BLAST of Carg16399 vs. TAIR 10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14
Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 122 DLIRTTRMAAYGLLILGPSQHLWFNFMSTVSPRRDYLSTFKKIVLGQAVYGPTLTSIFFS 181
           D IR  RM++YG L+ GP  + W+ F+    P+    +   K++L Q + GP++ ++ F+
Sbjct: 105 DWIRALRMSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFA 164

Query: 182 YNASLQGESGSEIAARLQRDLLPTLLNGLLFWPVCDFLTYKFVPV 227
           +N    G+  SE+  + Q+D LPTLL G  FW     L +  VP+
Sbjct: 165 WNNLWLGKL-SELGNKYQKDALPTLLYGFRFWVPVSILNFWVVPL 208

The following BLAST results are available for this feature:

BLAST of Carg16399 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020601.1	3.2e-138	100.00	PXMP2/4 family protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951025.1	6.6e-128	98.32	PXMP2/4 family protein 4-like [Cucurbita moschata] >XP_022951026.1 PXMP2/4 famil...	[more]
KAG6585699.1	3.8e-123	76.36	PXMP2/4 family protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023538047.1	8.4e-123	94.54	PXMP2/4 family protein 4-like [Cucurbita pepo subsp. pepo] >XP_023538048.1 PXMP2...	[more]
XP_023002127.1	1.0e-120	93.28	protein SYM1-like [Cucurbita maxima] >XP_023002128.1 protein SYM1-like [Cucurbit...	[more]

BLAST of Carg16399 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54FR4	9.0e-19	31.25	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
Q54GD8	1.3e-12	27.33	PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE...	[more]
Q2TXA2	3.7e-12	26.88	Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sym...	[more]
Q66GV0	1.8e-11	25.17	Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2	[more]
P0CQ39	3.4e-10	25.47	Protein SYM1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-350...	[more]

BLAST of Carg16399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGF6	3.2e-128	98.32	PXMP2/4 family protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453999 PE=3...	[more]
A0A6J1KSN2	5.0e-121	93.28	protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111496083 PE=3 SV=1	[more]
A0A6J1BSL7	6.3e-100	79.01	PXMP2/4 family protein 4 OS=Momordica charantia OX=3673 GN=LOC111005169 PE=3 SV=...	[more]
A0A6J1HHJ7	9.1e-99	75.63	PXMP2/4 family protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463001 PE=3...	[more]
A0A6J1K760	1.2e-98	75.63	PXMP2/4 family protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111492264 PE=3 S...	[more]

BLAST of Carg16399 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43140.1	5.5e-64	61.58	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	7.7e-58	50.22	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G33905.1	1.0e-57	58.72	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G19750.1	9.6e-16	27.22	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G42770.1	1.4e-14	34.29	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 185..236 e-value: 4.5E-11 score: 42.8
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 23..234
None	No IPR available	PANTHER	PTHR11266:SF18	OS12G0508100 PROTEIN	coord: 23..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16399-RA	Carg16399-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane