Carg16388 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16388
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein
Location	Carg_Chr12: 3616268 .. 3618179 (-)
RNA-Seq Expression	Carg16388
Synteny	Carg16388

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCTTAGCTCCGGATTTGATGAGATGGGTTCCTTCTCGTTCACTGACTTTCCTGAAGATGTTCAGTTATGTATTCTCTCCTTCCTCTCTCCCTCCGATGTAGTCACGTTCTCTTGTACATCGAAGAGAGTCGTCTCGCTCTGCAGGAATGATCGGAAACTGTGGTTTACGATGTGCGATCGGAGATGGGGATCGAAAACTCAGATCAAGAATTGGGGAAAAGGGAACATTACTTACAGGTTACTCTATAGAACTCTTCTTCAATGGGAGAATCTATTAGGTTTTTGGCGCCGGAGTGGCTCGTCTAGCGTATCATCGCCGCCGCTGGTGTTCTTCGAATGGGGCTCGGATTTTCTCGCTGGATTTAGGGTTTCTCCATCGAGTAACGGTACTTACGATGTGGTTAAGTCTCCATTTCTATGGCTGGGGCTCTCTTCAGAAGGTAAGGCCATGGGTTTTATTGACCCCAAGGGCTGTTCCGACTTCGCCGGGAAATTTTCGGATTTGGGAGAATCCGATTTCTCCGATTGCGATTTGGTTCCCGTCGATTTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCAGTCGTTTGTTTATCCGAATTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGGAGTTCGAGTTTCGCCAATTTGGCCGCCGCAACTGATGTGAACGAAGTGGCCAGTGGCTCTCCCGGAAGCTTACCGGACCAATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCTGGTGGGGATAGAGCTTCAAGGAGGCAAAGGAGGAGGGAGAGGGAAAGGCTAGGAAAGAAGAAATGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTGCGGCCATTACAGGGCTTGTGGAAGGTGCTGTCTCCCTCTCTTACCTCCTTGTGTTTATGTATTCTTTCAACTAGCTTGATATATACAATACAACAAAATATTAAGAACATGCTACCAAAACTTGAGAATTTAATGGCTTGGAAACGTTCAAACCATCTGATTTCAGAAATTGCAGGTGGGTTTATTCATGTTTCTATGTTGTATAGCTGATGTGATCATTGTTAGGCTCTGATATCTGCATCAATTGAGCTAAATGAAGAAACATGCTGTATTTTCTGTCAATTTGATCGTTTCTTTGGCTGGTTAGGAGTAGAACAGCTGTTTGTTGATTTTAATTTCATTCTTGCTAGTGGTACAATAGTGCTGGTTATGTGAGATGATATAGCATGGACTCCTATTTCATCTTGCAGGGAATCAGTGATGATATGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTTCTTGTCGGAGGGTTAGGGACTCGTCCGAACGTTTCTCTAGTAATGCTCCTGTGTTTTGGACATCGAATACTACGTTCTTGGAAACTCCATTCTCCCTTGAGGAAGAACTTTTATATGACTGTCGAATACATGTTCGGCCTCTACCAGCCAATGACATTGAAGAGCTAGTGCCTTCAATAGAAAATAAAAAGATTTTTCGCATCCTTTGCGTGAACTCGAGTTATGATCTAGTCCTACCAGACCTAGCTGGAAGTATTCCAAATCCTCGTAATGTCGAGGGAAGAATTTGGCAATACAATAATGGAACTTTTGGGTTCGGTTTCCTTAGGGATAACTTTATTATAGACCTGCAGCACATTGCTCGAAATGGTTTAATTCTGGACACTGTGGAATAATGTGTTTATTGATTCTCCTTTTAGTTAACATTGTAATGATTTGATGCATTCTTTGGCCAAGATTATTCTTTATACAATGTACAGATTGATTATGAATTGCTGATCATGTCAAAAGTTCACAAATACAATGTTCTTTTTCTTTTTCATGTAAA

mRNA sequence

ATGGCGAATCTTAGCTCCGGATTTGATGAGATGGGTTCCTTCTCGTTCACTGACTTTCCTGAAGATGTTCAGTTATGTATTCTCTCCTTCCTCTCTCCCTCCGATGTAGTCACGTTCTCTTGTACATCGAAGAGAGTCGTCTCGCTCTGCAGGAATGATCGGAAACTGTGGTTTACGATGTGCGATCGGAGATGGGGATCGAAAACTCAGATCAAGAATTGGGGAAAAGGGAACATTACTTACAGGTTACTCTATAGAACTCTTCTTCAATGGGAGAATCTATTAGGTTTTTGGCGCCGGAGTGGCTCGTCTAGCGTATCATCGCCGCCGCTGGTGTTCTTCGAATGGGGCTCGGATTTTCTCGCTGGATTTAGGGTTTCTCCATCGAGTAACGGTACTTACGATGTGGTTAAGTCTCCATTTCTATGGCTGGGGCTCTCTTCAGAAGGTAAGGCCATGGGTTTTATTGACCCCAAGGGCTGTTCCGACTTCGCCGGGAAATTTTCGGATTTGGGAGAATCCGATTTCTCCGATTGCGATTTGGTTCCCGTCGATTTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCAGTCGTTTGTTTATCCGAATTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGGAGTTCGAGTTTCGCCAATTTGGCCGCCGCAACTGATGTGAACGAAGTGGCCAGTGGCTCTCCCGGAAGCTTACCGGACCAATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCTGGTGGGGATAGAGCTTCAAGGAGGCAAAGGAGGAGGGAGAGGGAAAGGCTAGGAAAGAAGAAATGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTGCGGCCATTACAGGGCTTGTGGAAGGGAATCAGTGATGATATGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTTCTTGTCGGAGGGTTAGGGACTCGTCCGAACGTTTCTCTAGTAATGCTCCTGTGTTTTGGACATCGAATACTACGTTCTTGGAAACTCCATTCTCCCTTGAGGAAGAACTTTTATATGACTGTCGAATACATGTTCGGCCTCTACCAGCCAATGACATTGAAGAGCTAGTGCCTTCAATAGAAAATAAAAAGATTTTTCGCATCCTTTGCGTGAACTCGAGTTATGATCTAGTCCTACCAGACCTAGCTGGAAGTATTCCAAATCCTCGTAATGTCGAGGGAAGAATTTGGCAATACAATAATGGAACTTTTGGGTTCGGTTTCCTTAGGGATAACTTTATTATAGACCTGCAGCACATTGCTCGAAATGGTTTAATTCTGGACACTGTGGAATAATGTGTTTATTGATTCTCCTTTTAGTTAACATTGTAATGATTTGATGCATTCTTTGGCCAAGATTATTCTTTATACAATGTACAGATTGATTATGAATTGCTGATCATGTCAAAAGTTCACAAATACAATGTTCTTTTTCTTTTTCATGTAAA

Coding sequence (CDS)

ATGGCGAATCTTAGCTCCGGATTTGATGAGATGGGTTCCTTCTCGTTCACTGACTTTCCTGAAGATGTTCAGTTATGTATTCTCTCCTTCCTCTCTCCCTCCGATGTAGTCACGTTCTCTTGTACATCGAAGAGAGTCGTCTCGCTCTGCAGGAATGATCGGAAACTGTGGTTTACGATGTGCGATCGGAGATGGGGATCGAAAACTCAGATCAAGAATTGGGGAAAAGGGAACATTACTTACAGGTTACTCTATAGAACTCTTCTTCAATGGGAGAATCTATTAGGTTTTTGGCGCCGGAGTGGCTCGTCTAGCGTATCATCGCCGCCGCTGGTGTTCTTCGAATGGGGCTCGGATTTTCTCGCTGGATTTAGGGTTTCTCCATCGAGTAACGGTACTTACGATGTGGTTAAGTCTCCATTTCTATGGCTGGGGCTCTCTTCAGAAGGTAAGGCCATGGGTTTTATTGACCCCAAGGGCTGTTCCGACTTCGCCGGGAAATTTTCGGATTTGGGAGAATCCGATTTCTCCGATTGCGATTTGGTTCCCGTCGATTTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCAGTCGTTTGTTTATCCGAATTCCCCAGAACAAAGGAAAAAGGGATTCCGCCGGAGTTCGAGTTTCGCCAATTTGGCCGCCGCAACTGATGTGAACGAAGTGGCCAGTGGCTCTCCCGGAAGCTTACCGGACCAATTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGTCCTGGTGGGGATAGAGCTTCAAGGAGGCAAAGGAGGAGGGAGAGGGAAAGGCTAGGAAAGAAGAAATGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCGCCCACACCATTGCGGCCATTACAGGGCTTGTGGAAGGGAATCAGTGATGATATGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTTCTTGTCGGAGGGTTAGGGACTCGTCCGAACGTTTCTCTAGTAATGCTCCTGTGTTTTGGACATCGAATACTACGTTCTTGGAAACTCCATTCTCCCTTGAGGAAGAACTTTTATATGACTGTCGAATACATGTTCGGCCTCTACCAGCCAATGACATTGAAGAGCTAGTGCCTTCAATAGAAAATAAAAAGATTTTTCGCATCCTTTGCGTGAACTCGAGTTATGATCTAGTCCTACCAGACCTAGCTGGAAGTATTCCAAATCCTCGTAATGTCGAGGGAAGAATTTGGCAATACAATAATGGAACTTTTGGGTTCGGTTTCCTTAGGGATAACTTTATTATAGACCTGCAGCACATTGCTCGAAATGGTTTAATTCTGGACACTGTGGAATAA

Protein sequence

MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLEEELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE

Homology

[Close]

BLAST of Carg16388 vs. NCBI nr
Match: KAG7020612.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 946.8 bits (2446), Expect = 6.8e-272
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
           CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120

Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
           LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180

Query: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
           LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240

Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
           LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300

Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
           QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360

Query: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
           EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420

Query: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457

[Close]

BLAST of Carg16388 vs. NCBI nr
Match: KAG6585709.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 943.0 bits (2436), Expect = 9.9e-271
Identity = 455/457 (99.56%), Postives = 456/457 (99.78%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
           CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120

Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
           LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSD+GESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDMGESDFSDCD 180

Query: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
           LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240

Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
           LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300

Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
           QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360

Query: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
           EELLYDCRIHVRPLPANDIEELVPSIENKKI RILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420

Query: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457

[Close]

BLAST of Carg16388 vs. NCBI nr
Match: XP_022951260.1 (F-box protein At3g12350-like [Cucurbita moschata])

HSP 1 Score: 938.3 bits (2424), Expect = 2.4e-269
Identity = 452/457 (98.91%), Postives = 455/457 (99.56%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
           CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120

Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
           LAGFRVSPS NGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKF+DLGESDFSDCD
Sbjct: 121 LAGFRVSPSRNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFADLGESDFSDCD 180

Query: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
           LVPVDLSFMGKNHFVIEENQ+FVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240

Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
           LPDQLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKKKWEPEHFVKIVNCSPTPLRPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKKKWEPEHFVKIVNCSPTPLRPL 300

Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
           QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360

Query: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
           EELLYDCRIHVRPLPANDIEELVPSIENKKI RILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420

Query: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457

[Close]

BLAST of Carg16388 vs. NCBI nr
Match: XP_023002618.1 (F-box protein At3g12350-like [Cucurbita maxima])

HSP 1 Score: 936.0 bits (2418), Expect = 1.2e-268
Identity = 449/457 (98.25%), Postives = 454/457 (99.34%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVV FSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
           CDRRWGSKTQIKNWGKGN+TYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61  CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120

Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
           LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180

Query: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
           LVP+DLSFMGKNHFVIEENQ+FVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240

Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
           LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTP RPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300

Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
           QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360

Query: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
           EELLYDCRIHVRPLPANDIEELVPS+ENKKI RILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420

Query: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           RIWQYNNGTFGFGFLRDNFIIDL+HIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 457

[Close]

BLAST of Carg16388 vs. NCBI nr
Match: XP_023538289.1 (F-box protein At3g12350-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 920.6 bits (2378), Expect = 5.2e-264
Identity = 447/457 (97.81%), Postives = 451/457 (98.69%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSS FDEMGSF+FTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1   MANLSSEFDEMGSFTFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
           CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEW SDF
Sbjct: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWCSDF 120

Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
           LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180

Query: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
           LVPVDLSFMGKNHFVIEENQ+FVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240

Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
           LPDQLMSEIYQHFANRTSPG   ASRRQRRRE+ERLGKKKWEPEHFVKIVNCSPTPLRPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPG---ASRRQRRREKERLGKKKWEPEHFVKIVNCSPTPLRPL 300

Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
           QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360

Query: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
           EELLYDCRIHVRPLPANDIEELVPSIENKKI RILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420

Query: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           RIWQYNNGTFGFGFLRDNFIIDL+HIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 454

[Close]

BLAST of Carg16388 vs. ExPASy Swiss-Prot
Match: Q84WW1 (F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 3.2e-107
Identity = 209/447 (46.76%), Postives = 284/447 (63.53%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWG 75
           F + PED+QL ILS L+P+++ +F+CTSKR  SLC+ D K+W  MCD+RWG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGNITYRLLYRTLLQWENLLGFWRRSG--SSSVSSPPLVFFEWGSDFLAGFRVSPSSNGT 135
            G I YR LY+TL   ENL+GFWR  G  + + SSPPLVFF+WGS F+ G RV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPVDLSFMGKNH 195
           Y+V K+PFL +G+S EG++  F+D  G  +      DL E + S+ +LV VD++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHF 255
            ++EEN+ F   N  E ++             ++ D ++    SP        SE+Y   
Sbjct: 188 IMVEENRCFTNNNRREDQR-------------SSGDESDDLISSPN------FSEMYTQL 247

Query: 256 ANRTSPGGDRASRRQRRRERER-LGKKKWEPEHFVKIVNCSPTPLRPLQGLWKGISDDMS 315
           AN+TSPGGDR  RRQ+R+E+ER   + KWEPEHF+K+ +CSPTP RPLQGLWKG  +  S
Sbjct: 248 ANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKGFCEG-S 307

Query: 316 MDFYLVVYDDIGGISCRRVRD-SSERFSSNAPVFWTSNTTFLETPFSLEEELLYDCRIHV 375
           ++ YLV YD++GGI CR+V D S  R++   PVFWT   TF+ +PFS EEELL + RIH+
Sbjct: 308 IELYLVKYDEVGGIICRKVEDLSLSRYT--PPVFWTPKHTFIRSPFSAEEELLLNSRIHI 367

Query: 376 RPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEGRIWQYNNGTFG 435
            P            +    +  +L + SS DLVLP   G+       EGR+W Y+NGTFG
Sbjct: 368 SPF---------AEVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLYDNGTFG 419

Query: 436 FGFLRDNFIIDLQHIA-RNGLILDTVE 458
           FGFLRD FIIDL+ +A  +G + D VE
Sbjct: 428 FGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of Carg16388 vs. ExPASy TrEMBL
Match: A0A6J1GI95 (F-box protein At3g12350-like OS=Cucurbita moschata OX=3662 GN=LOC111454151 PE=4 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 1.2e-269
Identity = 452/457 (98.91%), Postives = 455/457 (99.56%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
           CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120

Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
           LAGFRVSPS NGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKF+DLGESDFSDCD
Sbjct: 121 LAGFRVSPSRNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFADLGESDFSDCD 180

Query: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
           LVPVDLSFMGKNHFVIEENQ+FVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPVDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240

Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
           LPDQLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKKKWEPEHFVKIVNCSPTPLRPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKKKWEPEHFVKIVNCSPTPLRPL 300

Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
           QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360

Query: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
           EELLYDCRIHVRPLPANDIEELVPSIENKKI RILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420

Query: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 457

[Close]

BLAST of Carg16388 vs. ExPASy TrEMBL
Match: A0A6J1KU38 (F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111496422 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 5.8e-269
Identity = 449/457 (98.25%), Postives = 454/457 (99.34%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVV FSCTSKRVVSLCRNDRKLWFTM
Sbjct: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVNFSCTSKRVVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120
           CDRRWGSKTQIKNWGKGN+TYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF
Sbjct: 61  CDRRWGSKTQIKNWGKGNLTYRLLYRTLLQWENLLGFWRRSGSSSVSSPPLVFFEWGSDF 120

Query: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180
           LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD
Sbjct: 121 LAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCD 180

Query: 181 LVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240
           LVP+DLSFMGKNHFVIEENQ+FVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS
Sbjct: 181 LVPIDLSFMGKNHFVIEENQTFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGS 240

Query: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPLRPL 300
           LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTP RPL
Sbjct: 241 LPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNCSPTPFRPL 300

Query: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360
           QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE
Sbjct: 301 QGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTFLETPFSLE 360

Query: 361 EELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEG 420
           EELLYDCRIHVRPLPANDIEELVPS+ENKKI RILCVNSSYDLVLPDLAGSIPNPRNVEG
Sbjct: 361 EELLYDCRIHVRPLPANDIEELVPSVENKKISRILCVNSSYDLVLPDLAGSIPNPRNVEG 420

Query: 421 RIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           RIWQYNNGTFGFGFLRDNFIIDL+HIARNGLILDTVE
Sbjct: 421 RIWQYNNGTFGFGFLRDNFIIDLKHIARNGLILDTVE 457

[Close]

BLAST of Carg16388 vs. ExPASy TrEMBL
Match: A0A0A0LR36 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 4.7e-234
Identity = 395/465 (84.95%), Postives = 425/465 (91.40%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSS +DEMGSFSFTDFPEDVQLCILSFLSPSD+ TFSCTSKR VSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSS--SVSSPPLVFFEWGS 120
           CDR+WGSKTQIKNWGKG ITYRLLY+TL QWENL+GFWRRSGSS  SV+SPPLVFFEWG 
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120

Query: 121 DFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSD 180
           DFLAG RVSPS NGTYDV KSPFLW+ LSSEG+AM FI+  G S+FAGKF+DLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180

Query: 181 CDLVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANL------AAATDVNE 240
           CDL+P+DLSFMGKNHFVIEEN +F YP SPE+ KKGFRRSSS ANL      AA TDV+ 
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240

Query: 241 VASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNC 300
           V SGSPGSLPD+LMSEIYQHFANRTSPGGDRASRRQRRRERERLGK+KWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTF 360
           SPTPLRPLQGLWKGIS+D+SMDFYLVVYDDIGGI+CR+V DSSER SS APVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360

Query: 361 LETPFSLEEELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSI 420
           LE PFS+EEE L+DCRIHV+PL ANDI+ELVPSIENK I RILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420

Query: 421 PNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           PNPRNVEGRIWQY+NGTFGFGFLRDNFIIDL+H+ARNG I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465

[Close]

BLAST of Carg16388 vs. ExPASy TrEMBL
Match: A0A5A7V081 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 PE=4 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 1.8e-230
Identity = 391/465 (84.09%), Postives = 421/465 (90.54%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSS +DEMGSFSFTDFPEDVQLCILSFLSPSD+ TFSCTSKR VSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSS--SVSSPPLVFFEWGS 120
           CDR+WGSKTQIKNWGKG ITYRLLY+TL QWENL+GFWRRSGSS  SV+SPPLVFFEWG 
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSD 180
           DFLAG RVSPS NGTYDV KSPFLWL LSS G+AM FID  G S+ AGKF++LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANL------AAATDVNE 240
            DL+P+DLSFMGKNHFVIEEN +F YP SPE+ KKGFRRSSS ANL      AA TDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNC 300
           V SGSPGSLPD+LMSEIYQHFANRTSPGGDRASRRQRRRERERLGK+KWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTF 360
           SPTPLRPLQGLWKGIS+D+SMDFYLVVYDDIGGI+CR+V DSSER SS APVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LETPFSLEEELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSI 420
           LE PFS+EEE L+DCRIHV+PL ANDI+ELVPSIENK I RILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           PNPRNVEGRIWQY+NGTFGFGFLRDNFIIDL+H+ARNG I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of Carg16388 vs. ExPASy TrEMBL
Match: A0A1S3BBA8 (F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 3.1e-230
Identity = 390/465 (83.87%), Postives = 421/465 (90.54%), Query Frame = 0


Query: 1   MANLSSGFDEMGSFSFTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTM 60
           MANLSS +DEMGSFSFTDFPEDVQLCILSFLSPSD+ TFSCTSKR VSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRRWGSKTQIKNWGKGNITYRLLYRTLLQWENLLGFWRRSGSS--SVSSPPLVFFEWGS 120
           CDR+WGSKTQIKNWGKG ITYRLLY+TL QWENL+GFWRRSGSS  SV+SPPLVFFEWG 
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGFRVSPSSNGTYDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSD 180
           DFLAG RVSPS NGTYDV KSPFLW+ LSS G+AM FID  G S+ AGKF++LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLVPVDLSFMGKNHFVIEENQSFVYPNSPEQRKKGFRRSSSFANL------AAATDVNE 240
            DL+P+DLSFMGKNHFVIEEN +F YP SPE+ KKGFRRSSS ANL      AA TDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VASGSPGSLPDQLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKKKWEPEHFVKIVNC 300
           V SGSPGSLPD+LMSEIYQHFANRTSPGGDRASRRQRRRERERLGK+KWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGISDDMSMDFYLVVYDDIGGISCRRVRDSSERFSSNAPVFWTSNTTF 360
           SPTPLRPLQGLWKGIS+D+SMDFYLVVYDDIGGI+CR+V DSSER SS APVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LETPFSLEEELLYDCRIHVRPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSI 420
           LE PFS+EEE L+DCRIHV+PL ANDI+ELVPSIENK I RILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYNNGTFGFGFLRDNFIIDLQHIARNGLILDTVE 458
           PNPRNVEGRIWQY+NGTFGFGFLRDNFIIDL+H+ARNG I+DTVE
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of Carg16388 vs. TAIR 10
Match: AT3G12350.1 (F-box family protein )

HSP 1 Score: 390.2 bits (1001), Expect = 2.3e-108
Identity = 209/447 (46.76%), Postives = 284/447 (63.53%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWG 75
           F + PED+QL ILS L+P+++ +F+CTSKR  SLC+ D K+W  MCD+RWG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGNITYRLLYRTLLQWENLLGFWRRSG--SSSVSSPPLVFFEWGSDFLAGFRVSPSSNGT 135
            G I YR LY+TL   ENL+GFWR  G  + + SSPPLVFF+WGS F+ G RV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPVDLSFMGKNH 195
           Y+V K+PFL +G+S EG++  F+D  G  +      DL E + S+ +LV VD++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHF 255
            ++EEN+ F   N  E ++             ++ D ++    SP        SE+Y   
Sbjct: 188 IMVEENRCFTNNNRREDQR-------------SSGDESDDLISSPN------FSEMYTQL 247

Query: 256 ANRTSPGGDRASRRQRRRERER-LGKKKWEPEHFVKIVNCSPTPLRPLQGLWKGISDDMS 315
           AN+TSPGGDR  RRQ+R+E+ER   + KWEPEHF+K+ +CSPTP RPLQGLWKG  +  S
Sbjct: 248 ANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKGFCEG-S 307

Query: 316 MDFYLVVYDDIGGISCRRVRD-SSERFSSNAPVFWTSNTTFLETPFSLEEELLYDCRIHV 375
           ++ YLV YD++GGI CR+V D S  R++   PVFWT   TF+ +PFS EEELL + RIH+
Sbjct: 308 IELYLVKYDEVGGIICRKVEDLSLSRYT--PPVFWTPKHTFIRSPFSAEEELLLNSRIHI 367

Query: 376 RPLPANDIEELVPSIENKKIFRILCVNSSYDLVLPDLAGSIPNPRNVEGRIWQYNNGTFG 435
            P            +    +  +L + SS DLVLP   G+       EGR+W Y+NGTFG
Sbjct: 368 SPF---------AEVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLYDNGTFG 419

Query: 436 FGFLRDNFIIDLQHIA-RNGLILDTVE 458
           FGFLRD FIIDL+ +A  +G + D VE
Sbjct: 428 FGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of Carg16388 vs. TAIR 10
Match: AT3G12350.2 (F-box family protein )

HSP 1 Score: 268.1 bits (684), Expect = 1.3e-71
Identity = 139/293 (47.44%), Postives = 191/293 (65.19%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDVVTFSCTSKRVVSLCRNDRKLWFTMCDRRWGSKTQIKNWG 75
           F + PED+QL ILS L+P+++ +F+CTSKR  SLC+ D K+W  MCD+RWG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGNITYRLLYRTLLQWENLLGFWRRSG--SSSVSSPPLVFFEWGSDFLAGFRVSPSSNGT 135
            G I YR LY+TL   ENL+GFWR  G  + + SSPPLVFF+WGS F+ G RV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVVKSPFLWLGLSSEGKAMGFIDPKGCSDFAGKFSDLGESDFSDCDLVPVDLSFMGKNH 195
           Y+V K+PFL +G+S EG++  F+D  G  +      DL E + S+ +LV VD++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENQSFVYPNSPEQRKKGFRRSSSFANLAAATDVNEVASGSPGSLPDQLMSEIYQHF 255
            ++EEN+ F   N  E ++             ++ D ++    SP        SE+Y   
Sbjct: 188 IMVEENRCFTNNNRREDQR-------------SSGDESDDLISSPN------FSEMYTQL 247

Query: 256 ANRTSPGGDRASRRQRRRERER-LGKKKWEPEHFVKIVNCSPTPLRPLQGLWK 306
           AN+TSPGGDR  RRQ+R+E+ER   + KWEPEHF+K+ +CSPTP RPLQGLWK
Sbjct: 248 ANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWK 277

The following BLAST results are available for this feature:

BLAST of Carg16388 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020612.1	6.8e-272	100.00	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6585709.1	9.9e-271	99.56	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022951260.1	2.4e-269	98.91	F-box protein At3g12350-like [Cucurbita moschata]	[more]
XP_023002618.1	1.2e-268	98.25	F-box protein At3g12350-like [Cucurbita maxima]	[more]
XP_023538289.1	5.2e-264	97.81	F-box protein At3g12350-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16388 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WW1	3.2e-107	46.76	F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1	[more]

BLAST of Carg16388 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI95	1.2e-269	98.91	F-box protein At3g12350-like OS=Cucurbita moschata OX=3662 GN=LOC111454151 PE=4 ...	[more]
A0A6J1KU38	5.8e-269	98.25	F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111496422 PE=4 SV...	[more]
A0A0A0LR36	4.7e-234	84.95	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 ...	[more]
A0A5A7V081	1.8e-230	84.09	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 ...	[more]
A0A1S3BBA8	3.1e-230	83.87	F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1	[more]

BLAST of Carg16388 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12350.1	2.3e-108	46.76	F-box family protein	[more]
AT3G12350.2	1.3e-71	47.44	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 19..60 e-value: 0.0048 score: 26.1
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 14..55 e-value: 1.2E-7 score: 31.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 13..60 score: 11.113627
None	No IPR available	GENE3D	1.20.1280.50		coord: 9..93 e-value: 3.3E-8 score: 35.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..277
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 9..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16388-RA	Carg16388-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding