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Carg16386 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCGTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGCGACGAGTACAAAATCTGGGCCTTGA ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCGTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGCGACGAGTACAAAATCTGGGCCTTGA ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCGTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGCGACGAGTACAAAATCTGGGCCTTGA MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAATSTKSGP Homology
BLAST of Carg16386 vs. NCBI nr
Match: KAG7020614.1 (hypothetical protein SDJN02_17300, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 298.1 bits (762), Expect = 4.1e-77 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Carg16386 vs. NCBI nr
Match: XP_022951262.1 (uncharacterized protein LOC111454153 [Cucurbita moschata] >XP_023536942.1 uncharacterized protein LOC111798173 [Cucurbita pepo subsp. pepo] >XP_023537894.1 uncharacterized protein LOC111798793 [Cucurbita pepo subsp. pepo] >KAG6585711.1 hypothetical protein SDJN03_18444, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 293.9 bits (751), Expect = 7.8e-76 Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Carg16386 vs. NCBI nr
Match: XP_023002833.1 (uncharacterized protein LOC111496579 [Cucurbita maxima]) HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74 Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0
BLAST of Carg16386 vs. NCBI nr
Match: XP_008444532.1 (PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo]) HSP 1 Score: 258.5 bits (659), Expect = 3.6e-65 Identity = 122/144 (84.72%), Postives = 137/144 (95.14%), Query Frame = 0
BLAST of Carg16386 vs. NCBI nr
Match: XP_038884662.1 (uncharacterized protein LOC120075388 [Benincasa hispida]) HSP 1 Score: 257.7 bits (657), Expect = 6.2e-65 Identity = 125/148 (84.46%), Postives = 139/148 (93.92%), Query Frame = 0
BLAST of Carg16386 vs. ExPASy TrEMBL
Match: A0A6J1GH58 (uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC111454153 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 3.8e-76 Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Carg16386 vs. ExPASy TrEMBL
Match: A0A6J1KUQ7 (uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 9.3e-75 Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0
BLAST of Carg16386 vs. ExPASy TrEMBL
Match: A0A1S3BAI0 (uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65 Identity = 122/144 (84.72%), Postives = 137/144 (95.14%), Query Frame = 0
BLAST of Carg16386 vs. ExPASy TrEMBL
Match: A0A0A0LN74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.7e-63 Identity = 121/148 (81.76%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of Carg16386 vs. ExPASy TrEMBL
Match: A0A5A7UYI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00970 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62 Identity = 117/136 (86.03%), Postives = 130/136 (95.59%), Query Frame = 0
BLAST of Carg16386 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22 Identity = 65/162 (40.12%), Postives = 94/162 (58.02%), Query Frame = 0
BLAST of Carg16386 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17 Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 0
BLAST of Carg16386 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 9.1e-06 Identity = 41/143 (28.67%), Postives = 73/143 (51.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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