Carg16290 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAGGGCACTGGATAGCTGGCAAGTGGCACCAACCAGCTGATCATTGGGTCGAAATCCGAGAGCAGATTAGAAACCGGTGGGTCTGGCCGTAGAGAATACGAACTCCGGATGTATAAAAGGGTTTCGGTGTGGGTCATTATGGAAAATTAGGGATCATTACCTTGGTTGGCACGCAGCAAAGATCTCGTGTTTTTTTCTTCTTTTTGTGTATTTGGGAATCCGTCTGGTTTTCTTTGTGGCTTTGAGAAGATTTGCGGGAAGAAGAAGAGCGTTTAGGGAAGCTCTGGATCCCAATTCCTCCCGTTCTTGGAGGCGGAGGTTATGCTTCTTCATTTTTCGGTACCGATTCATTCCGATTTCTCTTTGATTTTGTGAATATATCTATCTAGGTCAAATTTCCCCCCCCTATATGTTTGGTGTATGGTGTTTTTCGATTGACGGATTGATTGATCGGATTTAGTGTGGGATTTCTAGGTTTCTTCGTTGTCACTCGTTTTAATTTGGTTATCTGTTTATGGTTGATTCGACGACGGAATCTTGTGCGGTTTTTATGTTTGGTCATTGATCGAAGAAATTCTAATTTGTTAGCAGTTTGTGGCGGGGTGCTGTTTGTTTCATTTGCCTTTCGTGAATTGGAAGTTTGTCTGAGTGGTCGGTTGGTGAATTAGGGTTTCGTCTTGATTCAATGCCGGAAATCTTGTGAGATTCTTTTTGCTCACTAATCGCGAAGAATCTCGTTTGTTTGGACTTTTAGCGCGTAACTGCTGCTTCGCTTGCTTATTTTTTGTGAGCAGGATTTTTTGTCGACTGGTCGGTTGGTGAATTGTTGTTTTGTATTGATGAACGCGAGATGCCTATTGTCTTACATTGGTTCTTTTTTGGGATTTTCCTTGAGCCTTTTGCGCTTACGAAATTTTTCTTCTCTAATAATTTTTGCCTCTTGATACGATTGTTGCAATAATATGTATGTTCTGATCAAATTTGGGCTGTTTATGGTCTTTAGCATATGATAAATTGCAGCCCGGTGGTTTATAACATGCCACATCTTGATAAAATCTACTGACCTGTACTCTCGTTATCATTCATGAATATTTATTCTAACTCTTTGATGTTGTTGTAAAGTATCAGATATTTGAGGGCTTGGATATAAAGGGCTTTTTATATTTTCTCAAGATATGGAGCTTGCTTCTTTTTGGACAAATTCCTTCCGGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGACTGGCGTTTCCTTGTTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAG ATGGCGAAAGGGCACTGGATAGCTGGCAAGTGGCACCAACCAGCTGATCATTGGGTCGAAATCCGAGAGCAGATTAGAAACCGATTTGCGGGAAGAAGAAGAGCGTTTAGGGAAGCTCTGGATCCCAATTCCTCCCATATGGAGCTTGCTTCTTTTTGGACAAATTCCTTCCGGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGACTGGCGTTTCCTTGTTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAG ATGGCGAAAGGGCACTGGATAGCTGGCAAGTGGCACCAACCAGCTGATCATTGGGTCGAAATCCGAGAGCAGATTAGAAACCGATTTGCGGGAAGAAGAAGAGCGTTTAGGGAAGCTCTGGATCCCAATTCCTCCCATATGGAGCTTGCTTCTTTTTGGACAAATTCCTTCCGGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGACTGGCGTTTCCTTGTTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAG MAKGHWIAGKWHQPADHWVEIREQIRNRFAGRRRAFREALDPNSSHMELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT Homology
BLAST of Carg16290 vs. NCBI nr
Match: KAG7028229.1 (hypothetical protein SDJN02_09410, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 190.7 bits (483), Expect = 5.5e-45 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Carg16290 vs. NCBI nr
Match: XP_008448598.1 (PREDICTED: uncharacterized protein LOC103490726 [Cucumis melo]) HSP 1 Score: 84.0 bits (206), Expect = 7.2e-13 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Carg16290 vs. NCBI nr
Match: XP_011028056.1 (PREDICTED: uncharacterized protein LOC105128195 [Populus euphratica]) HSP 1 Score: 75.1 bits (183), Expect = 3.3e-10 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of Carg16290 vs. NCBI nr
Match: KAF7829149.1 (uncharacterized protein G2W53_020313 [Senna tora]) HSP 1 Score: 68.2 bits (165), Expect = 4.1e-08 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0
BLAST of Carg16290 vs. NCBI nr
Match: KAG2676796.1 (hypothetical protein I3760_12G069100 [Carya illinoinensis] >KAG6684586.1 hypothetical protein I3842_12G069900 [Carya illinoinensis] >KAG7952679.1 hypothetical protein I3843_12G071000 [Carya illinoinensis]) HSP 1 Score: 67.4 bits (163), Expect = 7.0e-08 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Carg16290 vs. ExPASy TrEMBL
Match: A0A1S3BKY3 (uncharacterized protein LOC103490726 OS=Cucumis melo OX=3656 GN=LOC103490726 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.5e-13 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Carg16290 vs. ExPASy TrEMBL
Match: A0A0D2PZL6 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G220600 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.7e-07 Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of Carg16290 vs. ExPASy TrEMBL
Match: A0A1U8MUE2 (uncharacterized protein LOC107938578 OS=Gossypium hirsutum OX=3635 GN=LOC107941384 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-07 Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg16290 vs. ExPASy TrEMBL
Match: A0A6P4LMT5 (uncharacterized protein LOC108453405 OS=Gossypium arboreum OX=29729 GN=LOC108453405 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-07 Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg16290 vs. ExPASy TrEMBL
Match: A0A7J9BIK1 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_019777 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-07 Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Carg16290 vs. TAIR 10
Match: AT4G19112.1 (conserved peptide upstream open reading frame 25 ) HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of Carg16290 vs. TAIR 10
Match: AT5G45428.1 (conserved peptide upstream open reading frame 24 ) HSP 1 Score: 47.4 bits (111), Expect = 6.9e-06 Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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