Carg16243 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16243
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	VQ domain-containing protein
Location	Carg_Chr06: 2723679 .. 2724011 (+)
RNA-Seq Expression	Carg16243
Synteny	Carg16243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCGCCGCCAGGAATCAATTGCCATTGCGACTTCGAGGTCCAAGGCCACCGCCATTGACGGTGAACAAATCCTCCACGAAGATCTTCAAGAAATCGACAACGACGAATCTGCGTCCGATTCCGAACCGACGCGATCCTGTAATCGTTTACCTTAGATCGCCGAAGATTATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTTACTGGAAACGGATCGTCCGTCGCCGTCGTTGCGGCGTCCTTTTCTGCTACTGGAATGATTGCCGATCATCCTGGCGAGGTATGTGTATCGGCCTGCAATTACATTCCGTCGTAG

mRNA sequence

ATGAACTCCGCCGCCAGGAATCAATTGCCATTGCGACTTCGAGGTCCAAGGCCACCGCCATTGACGGTGAACAAATCCTCCACGAAGATCTTCAAGAAATCGACAACGACGAATCTGCGTCCGATTCCGAACCGACGCGATCCTGTAATCGTTTACCTTAGATCGCCGAAGATTATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTTACTGGAAACGGATCGTCCGTCGCCGTCGTTGCGGCGTCCTTTTCTGCTACTGGAATGATTGCCGATCATCCTGGCGAGGTATGTGTATCGGCCTGCAATTACATTCCGTCGTAG

Coding sequence (CDS)

ATGAACTCCGCCGCCAGGAATCAATTGCCATTGCGACTTCGAGGTCCAAGGCCACCGCCATTGACGGTGAACAAATCCTCCACGAAGATCTTCAAGAAATCGACAACGACGAATCTGCGTCCGATTCCGAACCGACGCGATCCTGTAATCGTTTACCTTAGATCGCCGAAGATTATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTTACTGGAAACGGATCGTCCGTCGCCGTCGTTGCGGCGTCCTTTTCTGCTACTGGAATGATTGCCGATCATCCTGGCGAGGTATGTGTATCGGCCTGCAATTACATTCCGTCGTAG

Protein sequence

MNSAARNQLPLRLRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS

Homology

[Close]

BLAST of Carg16243 vs. NCBI nr
Match: KAG6596645.1 (VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028183.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.8 bits (556), Expect = 2.4e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MNSAARNQLPLRLRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIH 60
           MNSAARNQLPLRLRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIH
Sbjct: 1   MNSAARNQLPLRLRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIH 60

Query: 61  VRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 111
           VRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS
Sbjct: 61  VRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 110

[Close]

BLAST of Carg16243 vs. NCBI nr
Match: KAA0043778.1 (protein MKS1-like [Cucumis melo var. makuwa] >TYK25355.1 protein MKS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 8.7e-32
Identity = 83/109 (76.15%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 3   SAARNQLPLRLRGPRPPPLTVNKSSTKIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHV 62
           +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHV
Sbjct: 6   TAARNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPNQR---NRRSPIIIYLRSPKIIHV 65

Query: 63  RPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 111
           RPEEFKSFVQRLTGN SSVAVVA+S SA+GMI DH GE   SACN IPS
Sbjct: 66  RPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 109

[Close]

BLAST of Carg16243 vs. NCBI nr
Match: XP_008443599.1 (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 8.7e-32
Identity = 83/109 (76.15%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 3   SAARNQLPLRLRGPRPPPLTVNKSSTKIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHV 62
           +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHV
Sbjct: 4   TAARNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPNQR---NRRSPIIIYLRSPKIIHV 63

Query: 63  RPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 111
           RPEEFKSFVQRLTGN SSVAVVA+S SA+GMI DH GE   SACN IPS
Sbjct: 64  RPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 107

[Close]

BLAST of Carg16243 vs. NCBI nr
Match: KGN59247.1 (hypothetical protein Csa_002000 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-27
Identity = 80/113 (70.80%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 2   NSAARNQLPLRLRGPRPPPLTVNK-SSTKIFKKSTTTNLRPIPN---RRDPVIVYLRSPK 61
           ++AARN    +LRGPRPPPLTVNK SST I KKST  N  PI N   RR P+I+YLRSPK
Sbjct: 5   SAAARNH--SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPK 64

Query: 62  IIHVRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 111
           +IHVRPEEFKSFVQRLTGN SSVAVVA+S SATGMI D   E  VS CN IPS
Sbjct: 65  VIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112

[Close]

BLAST of Carg16243 vs. NCBI nr
Match: OMO68664.1 (VQ motif-containing protein [Corchorus olitorius])

HSP 1 Score: 84.3 bits (207), Expect = 7.0e-13
Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 13 LRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRR-----DPVIVYLRSPKIIHVRPEEFK 72
          L+GPRP PL V+ +S+KI KKS+TT+ +   N R     DPV++YLRSPKIIHVRPEEF 
Sbjct: 10 LQGPRPTPLKVSNTSSKIIKKSSTTSHQAPKNIRSKNIIDPVVIYLRSPKIIHVRPEEFM 69

Query: 73 SFVQRLTGNGSSVA 82
          S VQRLTG  S+ A
Sbjct: 70 SLVQRLTGKDSTTA 83

[Close]

BLAST of Carg16243 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08
Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 11 LRLRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPNR--------RDPVIVYLRSPKIIHVR 70
          L++ GPRP PL+V+K S KI  K    +  P PNR        R+PV++Y  SPK++H  
Sbjct: 22 LQICGPRPSPLSVHKDSHKI--KKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 81

Query: 71 PEEFKSFVQRLTGNGSSV 81
            EF + VQRLTG  S V
Sbjct: 82 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of Carg16243 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 16  PRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG 75
           P PP L VNK S  I K  + ++       R PVI+Y  +P+IIH  P++F + VQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of Carg16243 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.6e-06
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 13 LRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPN-RRDPVIVYLRSPKIIHVRPEEFKSFVQ 72
          + G RP  L +   S  I KK+++   +P P+ R  PVI+Y  SPK+IH R E+F + VQ
Sbjct: 9  INGSRPSSLKLAGESHTI-KKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 68

Query: 73 RLTG 76
          RLTG
Sbjct: 69 RLTG 71

[Close]

BLAST of Carg16243 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.3e-05
Identity = 32/90 (35.56%), Postives = 41/90 (45.56%), Query Frame = 0


Query: 15  GPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIH 74
           GP+P PL V   S KI KK       P P                  PV +Y  +P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 75  VRPEEFKSFVQRLTGNGSSVAVVAASFSAT 91
             P  F + VQRLTG  S+    ++S S+T
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSST 102

[Close]

BLAST of Carg16243 vs. ExPASy TrEMBL
Match: A0A5D3DP92 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004940 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-32
Identity = 83/109 (76.15%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 3   SAARNQLPLRLRGPRPPPLTVNKSSTKIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHV 62
           +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHV
Sbjct: 6   TAARNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPNQR---NRRSPIIIYLRSPKIIHV 65

Query: 63  RPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 111
           RPEEFKSFVQRLTGN SSVAVVA+S SA+GMI DH GE   SACN IPS
Sbjct: 66  RPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 109

[Close]

BLAST of Carg16243 vs. ExPASy TrEMBL
Match: A0A1S3B975 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103487155 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-32
Identity = 83/109 (76.15%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 3   SAARNQLPLRLRGPRPPPLTVNKSSTKIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHV 62
           +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHV
Sbjct: 4   TAARNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPNQR---NRRSPIIIYLRSPKIIHV 63

Query: 63  RPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 111
           RPEEFKSFVQRLTGN SSVAVVA+S SA+GMI DH GE   SACN IPS
Sbjct: 64  RPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 107

[Close]

BLAST of Carg16243 vs. ExPASy TrEMBL
Match: A0A0A0LEW5 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785410 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.3e-28
Identity = 80/113 (70.80%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 2   NSAARNQLPLRLRGPRPPPLTVNK-SSTKIFKKSTTTNLRPIPN---RRDPVIVYLRSPK 61
           ++AARN    +LRGPRPPPLTVNK SST I KKST  N  PI N   RR P+I+YLRSPK
Sbjct: 5   SAAARNH--SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPK 64

Query: 62  IIHVRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 111
           +IHVRPEEFKSFVQRLTGN SSVAVVA+S SATGMI D   E  VS CN IPS
Sbjct: 65  VIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112

[Close]

BLAST of Carg16243 vs. ExPASy TrEMBL
Match: A0A2N9GB07 (VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24585 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 1  MNSAARNQLPLRLRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPN--RRDPVIVYLRSPKI 60
          M+S  R +  L+L+GPRP PLTVNKSSTKI K       +P+PN  R  PVI+YL+SPK+
Sbjct: 1  MDSQTRKKY-LQLQGPRPAPLTVNKSSTKIKK-------QPLPNRTRSSPVIIYLQSPKV 60

Query: 61 IHVRPEEFKSFVQRLTGNGSSVAVVAASFS 89
          IHVRPEEF   VQ+LTGN +   V A S S
Sbjct: 61 IHVRPEEFMGIVQQLTGNQAPSRVAADSSS 82

[Close]

BLAST of Carg16243 vs. ExPASy TrEMBL
Match: A0A1R3JJT0 (VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05625 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.4e-13
Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 13 LRGPRPPPLTVNKSSTKIFKK-STTTNLRPIPNRR----DPVIVYLRSPKIIHVRPEEFK 72
          L+GPRP PL V+ +S+KI KK STT++L+   N R    DPV++YLRSPKIIHVRPEEF 
Sbjct: 10 LQGPRPTPLKVSNTSSKIIKKSSTTSHLQAPKNNRSKIIDPVVIYLRSPKIIHVRPEEFM 69

Query: 73 SFVQRLTGNGSSVAVVAA 86
          S VQRLTG  S+ A  ++
Sbjct: 70 SLVQRLTGKDSTTATTSS 87

[Close]

BLAST of Carg16243 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-09
Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 11 LRLRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPNR--------RDPVIVYLRSPKIIHVR 70
          L++ GPRP PL+V+K S KI  K    +  P PNR        R+PV++Y  SPK++H  
Sbjct: 22 LQICGPRPSPLSVHKDSHKI--KKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 81

Query: 71 PEEFKSFVQRLTGNGSSV 81
            EF + VQRLTG  S V
Sbjct: 82 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of Carg16243 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 53.9 bits (128), Expect = 9.4e-08
Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 16  PRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG 75
           P PP L VNK S  I K  + ++       R PVI+Y  +P+IIH  P++F + VQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of Carg16243 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 51.6 bits (122), Expect = 4.7e-07
Identity = 34/90 (37.78%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 15  GPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIH 74
           GPRP PL V   S KI KK       P P                  PVI+Y  SP+IIH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 75  VRPEEFKSFVQRLTGNGSSVAVVAASFSAT 91
             P  F + VQRLTG  +S +  ++S+S++
Sbjct: 73  THPNNFMTLVQRLTGK-TSTSTTSSSYSSS 101

[Close]

BLAST of Carg16243 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 51.2 bits (121), Expect = 6.1e-07
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 13 LRGPRPPPLTVNKSSTKIFKKSTTTNLRPIPN-RRDPVIVYLRSPKIIHVRPEEFKSFVQ 72
          + G RP  L +   S  I KK+++   +P P+ R  PVI+Y  SPK+IH R E+F + VQ
Sbjct: 9  INGSRPSSLKLAGESHTI-KKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 68

Query: 73 RLTG 76
          RLTG
Sbjct: 69 RLTG 71

[Close]

BLAST of Carg16243 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 32/90 (35.56%), Postives = 41/90 (45.56%), Query Frame = 0


Query: 15  GPRPPPLTVNKSSTKIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIH 74
           GP+P PL V   S KI KK       P P                  PV +Y  +P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 75  VRPEEFKSFVQRLTGNGSSVAVVAASFSAT 91
             P  F + VQRLTG  S+    ++S S+T
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSST 102

The following BLAST results are available for this feature:

BLAST of Carg16243 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596645.1	2.4e-53	100.00	VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma su...	[more]
KAA0043778.1	8.7e-32	76.15	protein MKS1-like [Cucumis melo var. makuwa] >TYK25355.1 protein MKS1-like [Cucu...	[more]
XP_008443599.1	8.7e-32	76.15	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
KGN59247.1	1.7e-27	70.80	hypothetical protein Csa_002000 [Cucumis sativus]	[more]
OMO68664.1	7.0e-13	60.81	VQ motif-containing protein [Corchorus olitorius]	[more]

BLAST of Carg16243 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD5	2.4e-08	44.87	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
Q9LS54	1.3e-06	43.33	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	8.6e-06	45.31	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
F4HWF9	4.3e-05	35.56	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of Carg16243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DP92	4.2e-32	76.15	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B975	4.2e-32	76.15	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103487155 PE=4 SV=1	[more]
A0A0A0LEW5	8.3e-28	70.80	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785410 PE=4 SV=...	[more]
A0A2N9GB07	1.2e-13	56.67	VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24585 PE=4 ...	[more]
A0A1R3JJT0	3.4e-13	58.97	VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05625 P...	[more]

BLAST of Carg16243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18690.1	1.7e-09	44.87	MAP kinase substrate 1	[more]
AT3G18360.1	9.4e-08	43.33	VQ motif-containing protein	[more]
AT1G21326.1	4.7e-07	37.78	VQ motif-containing protein	[more]
AT1G68450.1	6.1e-07	45.31	VQ motif-containing protein	[more]
AT1G21320.1	3.0e-06	35.56	nucleotide binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 55..78 e-value: 6.2E-8 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR33143:SF51	PROTEIN MKS1-LIKE	coord: 2..92
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 2..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16243-RA	Carg16243-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus