Carg16237 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16237
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase RHF2A-like
Location	Carg_Chr06: 2679452 .. 2683283 (-)
RNA-Seq Expression	Carg16237
Synteny	Carg16237

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGTGAAGGGGCATTTGTCTTGTGCCTTGCTTTTATCCTTTTTTTTCTCTCCGATTATCATTTTTCTTCTTTCTTCCTTGGTGGATTCTGGGGTTATTAAGATTTGGTGATGTGTTTCCCTAGCAGAGATTGATTTTCTCTGGAACAGGGGAATTTCTGAAGCTCGATCCGATTCGTTTTATGGGTTTTTTTCGTTGAATTTCTTCAACCCATCTTCTGGGAATTTCCCAATTGTTTAATCGAGGTAAACCCATAAGTTATTTTGCACGATTCTCTGATGTGATGCGATGCGATGCGATGATCTTTAATTTATTCCCGCTCCTTAATTTCAAAATTTCATCGAGACATTCATGGAAATCGAGTCTTGTTCTAGTTGGTGAAATCGGATTGATGTTATTTGATCAAGGAGAAGTCGTGAATCGTGATGGATTTGATCGGATTTGGATTGTGTGTTCTTGTGTAAATTAGGGTTAAATTGATTATGGTGTTGATGAACTTTAGGTTTTGGAGATGGAGGAAGAGAAGGATTCTGAGAATCGTTTGACATCGGCTGCTGCGTTTGTGGAAGGGGGAATTCAAGAAGCTTGTGATGATGCTTGCAGCATATGCCTTGAGGATTTTTGTGAAAGTGATCCTTCTACGGTACAATGATTGAGCCATTTATATCTTTATTGATTGTACCTTCCTTCCTTTTTTCTTGATGCAAAAAGTGGGGGAAAAAGAGTGAAAATGCCCACTTATTTCCACAGTGATTGTATGAATATGAACATGAACATGAACATTCCATTACTTATGATTCTTGTCTTGTAGGTTACTGCTTGCAAGCATGAGTTTCACCTCCAATGCATCCTTGAGTGGTATGATATAAGTGTTGCTCTCTTCTAAATTGTTACTGTTTATCATATGCACCTGGCCAGCAACTCCTGTTAAGTTTGGTTGTTCTGTTTATCCGAGTTACAATCGTTCTTGTTTCATGGATTTGGGAATCTTTTGTTAAATGTATTGTGAGTTAATGTGTGATGCATTTGGAACTTTGTTCTTGTGTTCTTGAGAAGTGACTTAATCTGGTTGTTCTGTTACCTGCGATTGTTGATAATATTGTCCGTTGGGACTGGCAACGAAGGCATACTTGTGATATTGAATTGCTCGTTTGATATGCAGGTGCCAGAGAAGTTCTCAATGTCCTATGTGTTGGCAATCTATCAGCCTGAAGGACCCGACCAGGTTCGGTTTTTTACTTCCATGTGATGCATCTGCTGTTTTGCGGGTTTTGAATGTTATGGCGTTTGTTTACTTGTTTATGTTTTGGCAGTCAAGAGTTGTTGGAGGCGGTTGAACGAGAGAGGAATATAAGGGTCACTCCGGTGAGGAATACTGCTGTGTTTCATCATCCAGCTATTGGCAATTTTGAGTTGCAACATGTTCGTTTCTCTTCTTGCCTTTTTACTTTTTCGAGTTTTGAAGATATTGGAATTGTCGAAGATGATGTTTTCTTCTAATGCAGCTACCACTGGGTGTTACTAATGCCGAGCTTGAAGAGCGAATAATCCAGCACCTGGCTGCAGCTGCTGCAATGGGGAGGGCACACCATATGGGTCGAAGAGAAGTGCAGAGGAGTCAATCGTCATCTCATGGACGTCCTCATTTCTTGGTTTTCTCCACTCATCCCGGTGGACCTCCGTCTGAGAATGTCTCAGCCTCCGAAGGGGGCACTGATCCAGCAGGGATTACTATGGCTAGCCCCTCTAGCCCACGGACACCTCGTGGGGATGAACCATCACAGCACATTGCAGAGTTTCAGTCCATTCAGGCTGACCAAATTTCTCGCTCAGCATCTGGATCCAACTTTTCAACCAATCGGCGAGGAGCTTCTTCTAGCGTTCGGTATATAATTGTCTCAAACGATCTTGATATGACTTCTTTGTTGCAAGCATTTATTTATTAATAGTGATTCTTCATTCACAGAATCTCCACTAGTGATTCTCCATCTTCAAATCTGGATAGAGCTGGGCCTTCTGAATTTCAGTCATTTTCTGAATCTCTTAAATCAAGACTTAATGCAGCGTCCACAAGGTATATGTGTGTTTTAAATTCTTGATGGATATGAACTCACACACATTACACACATAATGAAGTCACAACACTATAATTAGCTGTTCTGAGAGCTTTCTGGTTCTAAAGGTACAAAGAATCAATTTCGAAGAGTACAAGAGGATGGAAGGAGCGGCTATTCTCACGCAACTCTTCCATGTCTGAACTTGGTTCCGAAGTTCGAAGAGAAGTAAATGCAGGAATTGCCAGTGTATCACGTATGATGCAACGTCTTGAAACCAGAGATGATGGTGTTACAAATCAAGATTCTAATGAGCCGGGTGGCCACGTTAGAAGAGAGAGCAGCCCAGAGAACTCTTTAAACGACAAAAGTGCTACAGCTTCTTGTGCTGCAACATCTGCCGAGCGTTAAATCATTACGTATTAATTTTGGCAAATGCATCTGTCGTCAGCATCTTATTTCTTAAGGTGAGTAACAAAACACTATACCATTTATTAGCCTGCCAGTTTGGATACATATGAGTTCCTCTTAATTTTTGCTTCTTTTTGGTGTCTGATGCCAATTGGTTTGGTGCACCTTATACACACTGCTATCAGTTTGTTGTTTAAAAAGAAACATAAACTCACATGAGAAAGAAAGTCGTGATATCGACACAGATCTCAGAGAAAAACGAAAATATCATGGGATAATCAACAATCGAGGGGATTCATTAAAATGAATCGAGGTGGATGGAAAATCACCTCTTCCATCTTTCATCATAGTAGGACATTCCCCATTTGGAGCTAAACTAAACGAAAAAGTGACTTCTCGAAAGGATGTGATTTTTATCCTTGTCTTATACAACGGACCCACCATTGTTTGCCCGAGCCCATAGATCAGCTATAGACAAGTCAATGGTGTCATTCTGCCACGAGCAACTGACCATCCTAACCTTCTTAGCGACTTTTAACCTTCTCGAACACGACGAAGAGAATGGGGTGTGGGAGTGGAAGTAGCAAGAAGGAATTAAGATTAACGAAAGAATATATTGGAAGGTTTCAAACATCAATACAACTATGACAAGAGTTTGAGAAACCGTGCTAAGGGACTTCGAAAGGTATCCTAATAGGCAAGGTTCTTCTAGGATGTAAGTTTTACGACCGGATCTGTTGGATCAAGAAAGCGTATAAACAATTTAAGCTCCTTTAACGCAATGATCATCAAACACCTTAGAAAAACTTTTGTAATGAGATGATTTCGAACTCAATGCTGCAACCACCTAGCCAAGAGAGCAAAAAAATTTCAGTTTCACTTATGATCTTGAAATCTTCACTCTAGAACACCTTAGAAAAGTTCTTAAATGTCATTTTCAAACTCTTTGTAATGAGATGTTTCTTTAAACATCTTATTGATTCATGTTCATCTGTTGTTTTCCATTTAGTTGATGTTCAACATTTATACTATAATTTGTTATCTGACGTTGTTGATATAGGTTAGTAGAAGCTAAAGTCTCATTTTGTTTTCTGTCATGCTTAAACAAATTTAAAATAGTTAGACCAAGAACCTTGAAGCAAGATTGTGTCATGTATGCATTGCCAATACTAGTTGAGGTCATTTGTTGGTATTTGTGGGCTATTAGTGGGTGATAACGTCTTAGACGGTAAGATCCCACGTTGATTGGAGAGAGGAACGAGTGCCAGTGAGGACGCTGGGCCCTCGAAAGGGTGGATTGTAAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTCCCTAGCAGACACG

mRNA sequence

AAAGGTGAAGGGGCATTTGTCTTGTGCCTTGCTTTTATCCTTTTTTTTCTCTCCGATTATCATTTTTCTTCTTTCTTCCTTGGTGGATTCTGGGGTTATTAAGATTTGGTGATGTGTTTCCCTAGCAGAGATTGATTTTCTCTGGAACAGGGGAATTTCTGAAGCTCGATCCGATTCGTTTTATGGGTTTTTTTCGTTGAATTTCTTCAACCCATCTTCTGGGAATTTCCCAATTGTTTAATCGAGGTTTTGGAGATGGAGGAAGAGAAGGATTCTGAGAATCGTTTGACATCGGCTGCTGCGTTTGTGGAAGGGGGAATTCAAGAAGCTTGTGATGATGCTTGCAGCATATGCCTTGAGGATTTTTGTGAAAGTGATCCTTCTACGGTTACTGCTTGCAAGCATGAGTTTCACCTCCAATGCATCCTTGAGTGGTGCCAGAGAAGTTCTCAATGTCCTATGTGTTGGCAATCTATCAGCCTGAAGGACCCGACCAGTCAAGAGTTGTTGGAGGCGGTTGAACGAGAGAGGAATATAAGGGTCACTCCGGTGAGGAATACTGCTGTGTTTCATCATCCAGCTATTGGCAATTTTGAGTTGCAACATCTACCACTGGGTGTTACTAATGCCGAGCTTGAAGAGCGAATAATCCAGCACCTGGCTGCAGCTGCTGCAATGGGGAGGGCACACCATATGGGTCGAAGAGAAGTGCAGAGGAGTCAATCGTCATCTCATGGACGTCCTCATTTCTTGGTTTTCTCCACTCATCCCGGTGGACCTCCGTCTGAGAATGTCTCAGCCTCCGAAGGGGGCACTGATCCAGCAGGGATTACTATGGCTAGCCCCTCTAGCCCACGGACACCTCGTGGGGATGAACCATCACAGCACATTGCAGAGTTTCAGTCCATTCAGGCTGACCAAATTTCTCGCTCAGCATCTGGATCCAACTTTTCAACCAATCGGCGAGGAGCTTCTTCTAGCGTTCGAATCTCCACTAGTGATTCTCCATCTTCAAATCTGGATAGAGCTGGGCCTTCTGAATTTCAGTCATTTTCTGAATCTCTTAAATCAAGACTTAATGCAGCGTCCACAAGGTACAAAGAATCAATTTCGAAGAGTACAAGAGGATGGAAGGAGCGGCTATTCTCACGCAACTCTTCCATGTCTGAACTTGGTTCCGAAGTTCGAAGAGAAGTAAATGCAGGAATTGCCAGTGTATCACGTATGATGCAACGTCTTGAAACCAGAGATGATGGTGTTACAAATCAAGATTCTAATGAGCCGGGTGGCCACGTTAGAAGAGAGAGCAGCCCAGAGAACTCTTTAAACGACAAAAGTGCTACAGCTTCTTGTGCTGCAACATCTGCCGAGCGTTAAATCATTACGTATTAATTTTGGCAAATGCATCTGTCGTCAGCATCTTATTTCTTAAGGTGAGTAACAAAACACTATACCATTTATTAGCCTGCCAGTTTGGATACATATGAGTTCCTCTTAATTTTTGCTTCTTTTTGGTGTCTGATGCCAATTGGTTTGGTGCACCTTATACACACTGCTATCAGTTTGTTGTTTAAAAAGAAACATAAACTCACATGAGAAAGAAAGTCGTGATATCGACACAGATCTCAGAGAAAAACGAAAATATCATGGGATAATCAACAATCGAGGGGATTCATTAAAATGAATCGAGGTGGATGGAAAATCACCTCTTCCATCTTTCATCATAGTAGGACATTCCCCATTTGGAGCTAAACTAAACGAAAAAGTGACTTCTCGAAAGGATGTGATTTTTATCCTTGTCTTATACAACGGACCCACCATTGTTTGCCCGAGCCCATAGATCAGCTATAGACAAGTCAATGGTGTCATTCTGCCACGAGCAACTGACCATCCTAACCTTCTTAGCGACTTTTAACCTTCTCGAACACGACGAAGAGAATGGGGTGTGGGAGTGGAAGTAGCAAGAAGGAATTAAGATTAACGAAAGAATATATTGGAAGGTTTCAAACATCAATACAACTATGACAAGAGTTTGAGAAACCGTGCTAAGGGACTTCGAAAGGTATCCTAATAGGCAAGGTTCTTCTAGGATGTAAGTTTTACGACCGGATCTGTTGGATCAAGAAAGCGTATAAACAATTTAAGCTCCTTTAACGCAATGATCATCAAACACCTTAGAAAAACTTTTGTAATGAGATGATTTCGAACTCAATGCTGCAACCACCTAGCCAAGAGAGCAAAAAAATTTCAGTTTCACTTATGATCTTGAAATCTTCACTCTAGAACACCTTAGAAAAGTTCTTAAATGTCATTTTCAAACTCTTTGTAATGAGATGTTTCTTTAAACATCTTATTGATTCATGTTCATCTGTTGTTTTCCATTTAGTTGATGTTCAACATTTATACTATAATTTGTTATCTGACGTTGTTGATATAGGTTAGTAGAAGCTAAAGTCTCATTTTGTTTTCTGTCATGCTTAAACAAATTTAAAATAGTTAGACCAAGAACCTTGAAGCAAGATTGTGTCATGTATGCATTGCCAATACTAGTTGAGGTCATTTGTTGGTATTTGTGGGCTATTAGTGGGTGATAACGTCTTAGACGGTAAGATCCCACGTTGATTGGAGAGAGGAACGAGTGCCAGTGAGGACGCTGGGCCCTCGAAAGGGTGGATTGTAAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTCCCTAGCAGACACG

Coding sequence (CDS)

ATGGAGGAAGAGAAGGATTCTGAGAATCGTTTGACATCGGCTGCTGCGTTTGTGGAAGGGGGAATTCAAGAAGCTTGTGATGATGCTTGCAGCATATGCCTTGAGGATTTTTGTGAAAGTGATCCTTCTACGGTTACTGCTTGCAAGCATGAGTTTCACCTCCAATGCATCCTTGAGTGGTGCCAGAGAAGTTCTCAATGTCCTATGTGTTGGCAATCTATCAGCCTGAAGGACCCGACCAGTCAAGAGTTGTTGGAGGCGGTTGAACGAGAGAGGAATATAAGGGTCACTCCGGTGAGGAATACTGCTGTGTTTCATCATCCAGCTATTGGCAATTTTGAGTTGCAACATCTACCACTGGGTGTTACTAATGCCGAGCTTGAAGAGCGAATAATCCAGCACCTGGCTGCAGCTGCTGCAATGGGGAGGGCACACCATATGGGTCGAAGAGAAGTGCAGAGGAGTCAATCGTCATCTCATGGACGTCCTCATTTCTTGGTTTTCTCCACTCATCCCGGTGGACCTCCGTCTGAGAATGTCTCAGCCTCCGAAGGGGGCACTGATCCAGCAGGGATTACTATGGCTAGCCCCTCTAGCCCACGGACACCTCGTGGGGATGAACCATCACAGCACATTGCAGAGTTTCAGTCCATTCAGGCTGACCAAATTTCTCGCTCAGCATCTGGATCCAACTTTTCAACCAATCGGCGAGGAGCTTCTTCTAGCGTTCGAATCTCCACTAGTGATTCTCCATCTTCAAATCTGGATAGAGCTGGGCCTTCTGAATTTCAGTCATTTTCTGAATCTCTTAAATCAAGACTTAATGCAGCGTCCACAAGGTACAAAGAATCAATTTCGAAGAGTACAAGAGGATGGAAGGAGCGGCTATTCTCACGCAACTCTTCCATGTCTGAACTTGGTTCCGAAGTTCGAAGAGAAGTAAATGCAGGAATTGCCAGTGTATCACGTATGATGCAACGTCTTGAAACCAGAGATGATGGTGTTACAAATCAAGATTCTAATGAGCCGGGTGGCCACGTTAGAAGAGAGAGCAGCCCAGAGAACTCTTTAAACGACAAAAGTGCTACAGCTTCTTGTGCTGCAACATCTGCCGAGCGTTAA

Protein sequence

MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPLGVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENVSASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGASSSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRNSSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDKSATASCAATSAER

Homology

[Close]

BLAST of Carg16237 vs. NCBI nr
Match: KAG7028177.1 (E3 ubiquitin-protein ligase RHF2A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 711.8 bits (1836), Expect = 3.0e-201
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV
Sbjct: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS
Sbjct: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN
Sbjct: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK
Sbjct: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360

Query: 361 SATASCAATSAER 374
           SATASCAATSAER
Sbjct: 361 SATASCAATSAER 373

[Close]

BLAST of Carg16237 vs. NCBI nr
Match: XP_022934876.1 (E3 ubiquitin-protein ligase RHF2A-like [Cucurbita moschata])

HSP 1 Score: 709.1 bits (1829), Expect = 2.0e-200
Identity = 371/373 (99.46%), Postives = 372/373 (99.73%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV
Sbjct: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SASEGGTDPAGITMASPSSPRTPRGDEPSQHIA+FQSIQ DQISRSASGSNFSTNRRGAS
Sbjct: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAQFQSIQTDQISRSASGSNFSTNRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN
Sbjct: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK
Sbjct: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360

Query: 361 SATASCAATSAER 374
           SATASCAATSAER
Sbjct: 361 SATASCAATSAER 373

[Close]

BLAST of Carg16237 vs. NCBI nr
Match: XP_023539441.1 (E3 ubiquitin-protein ligase RHF2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 707.6 bits (1825), Expect = 5.7e-200
Identity = 370/373 (99.20%), Postives = 372/373 (99.73%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV
Sbjct: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SASEGGT+PAGITMASPSSPRTPRGDEPSQHIA+FQSIQ DQISRSASGSNFSTNRRGAS
Sbjct: 181 SASEGGTEPAGITMASPSSPRTPRGDEPSQHIAQFQSIQTDQISRSASGSNFSTNRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN
Sbjct: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK
Sbjct: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360

Query: 361 SATASCAATSAER 374
           SATASCAATSAER
Sbjct: 361 SATASCAATSAER 373

[Close]

BLAST of Carg16237 vs. NCBI nr
Match: KAG6596638.1 (E3 ubiquitin-protein ligase RHF2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 704.1 bits (1816), Expect = 6.3e-199
Identity = 368/373 (98.66%), Postives = 370/373 (99.20%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 117 MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 176

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLE VERERNIRVT VRNTAVFHHPAIGNFELQHLPL
Sbjct: 177 CQRSSQCPMCWQSISLKDPTSQELLEVVERERNIRVTSVRNTAVFHHPAIGNFELQHLPL 236

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV
Sbjct: 237 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 296

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SASEGGTDPAGITMASPSSPRTPRGDEPSQHIA+FQSIQ DQISRSASGSNFSTNRRGAS
Sbjct: 297 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAQFQSIQTDQISRSASGSNFSTNRRGAS 356

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           SS+RISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN
Sbjct: 357 SSIRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 416

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK
Sbjct: 417 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 476

Query: 361 SATASCAATSAER 374
           SATASCAATSAER
Sbjct: 477 SATASCAATSAER 489

[Close]

BLAST of Carg16237 vs. NCBI nr
Match: XP_023005675.1 (E3 ubiquitin-protein ligase RHF2A-like [Cucurbita maxima])

HSP 1 Score: 702.6 bits (1812), Expect = 1.8e-198
Identity = 368/373 (98.66%), Postives = 369/373 (98.93%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GVTNAELEERIIQHL AAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGP SENV
Sbjct: 121 GVTNAELEERIIQHLTAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPSSENV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SASEGGTDPAGITMASPSSPRTPRGDEPSQHIA+FQSIQ DQISRSASGSNFS NRRGAS
Sbjct: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAQFQSIQTDQISRSASGSNFSANRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN
Sbjct: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK
Sbjct: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360

Query: 361 SATASCAATSAER 374
           SATASCAATSAER
Sbjct: 361 SATASCAATSAER 373

[Close]

BLAST of Carg16237 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 3.6e-104
Identity = 225/382 (58.90%), Postives = 261/382 (68.32%), Query Frame = 0


Query: 3   EEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQ 62
           E   SE  LTSAAAFVEGGIQ+ACDDACSICLE FCESDPST+T+CKHE+HLQCILEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 63  RSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPLGV 122
           RSSQCPMCWQSISLKDPTSQELLEAVE+ERN R  P RN  +F HP +G+FELQHLP+GV
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 123 TNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGG---PPSEN 182
            NAE+EERIIQHLAAAAAMGRA H  RRE  RS+SSS G   F+VFS+ P     PP   
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPP 185

Query: 183 VSASEGGTDPAGITMASPSSPRTPRGDEPSQ-HIAEFQSIQADQISRSASGSNFSTNRRG 242
           + +S    D +       + P    G+   Q +     S    Q+S SAS SN       
Sbjct: 186 MPSSPSQRDESDTV---SNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSN------- 245

Query: 243 ASSSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFS 302
                R     SPS   DRAGPSE QSFSESLKSRLNA STRYKESISK+TR WK+RLFS
Sbjct: 246 ----SRPLNQSSPSEQ-DRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFS 305

Query: 303 RNSSMSELGSEVRREVNAGIASVSRMMQRLETRD----------DGVTNQDSNEPGGHVR 362
           RN+SM++LGSEV+REV+AGIA+VSRMM+RLETR+          D   N        H R
Sbjct: 306 RNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNR 365

Query: 363 RESSPENSLNDKSATASCAATS 371
             +  E+S+N++    +CA  S
Sbjct: 366 AAAGDEHSVNERGVKETCATGS 372

[Close]

BLAST of Carg16237 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.0e-39
Identity = 124/320 (38.75%), Postives = 176/320 (55.00%), Query Frame = 0


Query: 12  TSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQCPMCW 71
           +S+A  V        DDACSICLE F   DPSTVT+CKHE+HLQCI+EW QRS +CP+CW
Sbjct: 28  SSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICW 87

Query: 72  QSISLKDPTSQELLEAVERERNIRVTPVRNTA-VFHHPAIGNFELQHLPLGVTNAELEER 131
           Q   L+DP SQELL AVE+ER ++   + +++ +  H +  +F  +      ++   +E+
Sbjct: 88  QLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEEEESQFSS--FDEQ 147

Query: 132 IIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGG-PPSENVSASEGGTDP 191
            ++HL  AA   R   + RR+ Q S S        LV S+ P    P++ V+        
Sbjct: 148 FLRHLTEAA--HRRCLLRRRDGQISSS--------LVSSSDPTTIHPTDLVNLYR--LSA 207

Query: 192 AGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGASSSVRISTSD 251
                   S+P    G      ++   SI AD    S +GS             RIS   
Sbjct: 208 ISHVEHQNSNPCPSPGSMTPSPVSGHSSIPAD----SNNGS-------------RISPGP 267

Query: 252 SPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRNSSMSELGSE 311
           SPS +       E  S  E++KS+L AAS +YKESISKS +G KE+L +RN+S+ EL   
Sbjct: 268 SPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKG 316

Query: 312 VRREVNAGIASVSRMMQRLE 330
           V+RE+NAGIA V+RM++R++
Sbjct: 328 VQREMNAGIAGVARMIERMD 316

[Close]

BLAST of Carg16237 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.3e-09
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 27  DDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQCPMCWQSISLKD 79
           +D C IC ED+   +P   T C+HEFHL C+LEW +RS +CP+C + +   D
Sbjct: 136 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of Carg16237 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.7e-08
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 27  DDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQCPMC 71
           +D C  CLE++   +P  VT C H FHL CI EW +RS  CP+C
Sbjct: 178 EDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVC 221

[Close]

BLAST of Carg16237 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 28  DACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQCPMCWQSISLKD 79
           D C ICLE++   +P  +T C H+FHL CIL W +RS  CP+C + + L +
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTE 152

[Close]

BLAST of Carg16237 vs. ExPASy TrEMBL
Match: A0A6J1F325 (E3 ubiquitin-protein ligase RHF2A-like OS=Cucurbita moschata OX=3662 GN=LOC111441910 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 9.5e-201
Identity = 371/373 (99.46%), Postives = 372/373 (99.73%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV
Sbjct: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SASEGGTDPAGITMASPSSPRTPRGDEPSQHIA+FQSIQ DQISRSASGSNFSTNRRGAS
Sbjct: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAQFQSIQTDQISRSASGSNFSTNRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN
Sbjct: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK
Sbjct: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360

Query: 361 SATASCAATSAER 374
           SATASCAATSAER
Sbjct: 361 SATASCAATSAER 373

[Close]

BLAST of Carg16237 vs. ExPASy TrEMBL
Match: A0A6J1KY20 (E3 ubiquitin-protein ligase RHF2A-like OS=Cucurbita maxima OX=3661 GN=LOC111498605 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 8.9e-199
Identity = 368/373 (98.66%), Postives = 369/373 (98.93%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GVTNAELEERIIQHL AAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGP SENV
Sbjct: 121 GVTNAELEERIIQHLTAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPSSENV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SASEGGTDPAGITMASPSSPRTPRGDEPSQHIA+FQSIQ DQISRSASGSNFS NRRGAS
Sbjct: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAQFQSIQTDQISRSASGSNFSANRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN
Sbjct: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK
Sbjct: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360

Query: 361 SATASCAATSAER 374
           SATASCAATSAER
Sbjct: 361 SATASCAATSAER 373

[Close]

BLAST of Carg16237 vs. ExPASy TrEMBL
Match: A0A0A0LB49 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G783860 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 3.0e-178
Identity = 336/373 (90.08%), Postives = 349/373 (93.57%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIR TPVRNTAVFHHPA+GNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRATPVRNTAVFHHPALGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GV NAELEERIIQHLAAAAAMGR HH+GRRE  RS+SSSHGRPHFLVFSTHPGGPP E+V
Sbjct: 121 GVNNAELEERIIQHLAAAAAMGRTHHIGRRE-GRSRSSSHGRPHFLVFSTHPGGPP-EHV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SAS   T+PAGIT+ASPSSP TPRGDEPSQHIA+F SIQ D +SRSASGSNFS +RRGAS
Sbjct: 181 SASGVHTEPAGITVASPSSPLTPRGDEPSQHIAQFPSIQTDHVSRSASGSNFSASRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           S +RISTSDSPS NLDRAGPSEFQSFSESLKSRLNA STRYKESISKSTRGWKERLFSRN
Sbjct: 241 SGIRISTSDSPSPNLDRAGPSEFQSFSESLKSRLNAVSTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           +SMSELGSEVRREVNAGIASVSRMMQRLETR+DGVTNQ SNE GGH RRES+PENSL D 
Sbjct: 301 TSMSELGSEVRREVNAGIASVSRMMQRLETREDGVTNQGSNEQGGHNRRESNPENSLTDS 360

Query: 361 SATASCAATSAER 374
           SA  SCAATSAER
Sbjct: 361 SAPTSCAATSAER 371

[Close]

BLAST of Carg16237 vs. ExPASy TrEMBL
Match: A0A1S3B7P6 (E3 ubiquitin-protein ligase RHF2A-like OS=Cucumis melo OX=3656 GN=LOC103486708 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.9e-178
Identity = 336/373 (90.08%), Postives = 349/373 (93.57%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIR TPVRNTAVFHHPA+GNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRATPVRNTAVFHHPALGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GV N+ELEERIIQHLAAAAAMGR HH+GRRE  RS+SSSHGRPHFLVFSTHPGGPP E+V
Sbjct: 121 GVNNSELEERIIQHLAAAAAMGRTHHIGRRE-GRSRSSSHGRPHFLVFSTHPGGPP-EHV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SAS   T+PAGIT+ASPSSP TPRGDEPS HIA+F SIQ D +SRSASGSNFS +RRGAS
Sbjct: 181 SASGVHTEPAGITVASPSSPLTPRGDEPSHHIAQFPSIQTDHVSRSASGSNFSASRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           S VRISTSDSPS NLDRAGPSEFQSFSESLKSRLNA STRYKESISKSTRGWKERLFSRN
Sbjct: 241 SGVRISTSDSPSPNLDRAGPSEFQSFSESLKSRLNAVSTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           +SMSELGSEVRREVNAGIASVSRMMQRLETR+DGVTNQ SNE GGH RRES+PENSLND 
Sbjct: 301 TSMSELGSEVRREVNAGIASVSRMMQRLETREDGVTNQGSNEQGGHNRRESNPENSLNDS 360

Query: 361 SATASCAATSAER 374
           SA  SCAATSAER
Sbjct: 361 SAPTSCAATSAER 371

[Close]

BLAST of Carg16237 vs. ExPASy TrEMBL
Match: A0A5A7TKD8 (E3 ubiquitin-protein ligase RHF2A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004880 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.9e-178
Identity = 336/373 (90.08%), Postives = 349/373 (93.57%), Query Frame = 0


Query: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60
           MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW
Sbjct: 1   MEEEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEW 60

Query: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPL 120
           CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIR TPVRNTAVFHHPA+GNFELQHLPL
Sbjct: 61  CQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRATPVRNTAVFHHPALGNFELQHLPL 120

Query: 121 GVTNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGGPPSENV 180
           GV N+ELEERIIQHLAAAAAMGR HH+GRRE  RS+SSSHGRPHFLVFSTHPGGPP E+V
Sbjct: 121 GVNNSELEERIIQHLAAAAAMGRTHHIGRRE-GRSRSSSHGRPHFLVFSTHPGGPP-EHV 180

Query: 181 SASEGGTDPAGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGAS 240
           SAS   T+PAGIT+ASPSSP TPRGDEPS HIA+F SIQ D +SRSASGSNFS +RRGAS
Sbjct: 181 SASGVHTEPAGITVASPSSPLTPRGDEPSHHIAQFPSIQTDHVSRSASGSNFSASRRGAS 240

Query: 241 SSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRN 300
           S VRISTSDSPS NLDRAGPSEFQSFSESLKSRLNA STRYKESISKSTRGWKERLFSRN
Sbjct: 241 SGVRISTSDSPSPNLDRAGPSEFQSFSESLKSRLNAVSTRYKESISKSTRGWKERLFSRN 300

Query: 301 SSMSELGSEVRREVNAGIASVSRMMQRLETRDDGVTNQDSNEPGGHVRRESSPENSLNDK 360
           +SMSELGSEVRREVNAGIASVSRMMQRLETR+DGVTNQ SNE GGH RRES+PENSLND 
Sbjct: 301 TSMSELGSEVRREVNAGIASVSRMMQRLETREDGVTNQGSNEQGGHNRRESNPENSLNDS 360

Query: 361 SATASCAATSAER 374
           SA  SCAATSAER
Sbjct: 361 SAPTSCAATSAER 371

[Close]

BLAST of Carg16237 vs. TAIR 10
Match: AT5G22000.2 (RING-H2 group F2A )

HSP 1 Score: 379.8 bits (974), Expect = 2.5e-105
Identity = 224/378 (59.26%), Postives = 260/378 (68.78%), Query Frame = 0


Query: 7   SENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQ 66
           SE  LTSAAAFVEGGIQ+ACDDACSICLE FCESDPST+T+CKHE+HLQCILEWCQRSSQ
Sbjct: 10  SEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQ 69

Query: 67  CPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPLGVTNAE 126
           CPMCWQSISLKDPTSQELLEAVE+ERN R  P RN  +F HP +G+FELQHLP+GV NAE
Sbjct: 70  CPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGVDNAE 129

Query: 127 LEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGG---PPSENVSAS 186
           +EERIIQHLAAAAAMGRA H  RRE  RS+SSS G   F+VFS+ P     PP   + +S
Sbjct: 130 IEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPPMPSS 189

Query: 187 EGGTDPAGITMASPSSPRTPRGDEPSQ-HIAEFQSIQADQISRSASGSNFSTNRRGASSS 246
               D +       + P    G+   Q +     S    Q+S SAS SN           
Sbjct: 190 PSQRDESDTV---SNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSN----------- 249

Query: 247 VRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRNSS 306
            R     SPS   DRAGPSE QSFSESLKSRLNA STRYKESISK+TR WK+RLFSRN+S
Sbjct: 250 SRPLNQSSPSEQ-DRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTS 309

Query: 307 MSELGSEVRREVNAGIASVSRMMQRLETRD----------DGVTNQDSNEPGGHVRRESS 366
           M++LGSEV+REV+AGIA+VSRMM+RLETR+          D   N        H R  + 
Sbjct: 310 MADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNRAAAG 369

Query: 367 PENSLNDKSATASCAATS 371
            E+S+N++    +CA  S
Sbjct: 370 DEHSVNERGVKETCATGS 372

[Close]

BLAST of Carg16237 vs. TAIR 10
Match: AT5G22000.1 (RING-H2 group F2A )

HSP 1 Score: 379.8 bits (974), Expect = 2.5e-105
Identity = 225/382 (58.90%), Postives = 261/382 (68.32%), Query Frame = 0


Query: 3   EEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQ 62
           E   SE  LTSAAAFVEGGIQ+ACDDACSICLE FCESDPST+T+CKHE+HLQCILEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 63  RSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPLGV 122
           RSSQCPMCWQSISLKDPTSQELLEAVE+ERN R  P RN  +F HP +G+FELQHLP+GV
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 123 TNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGG---PPSEN 182
            NAE+EERIIQHLAAAAAMGRA H  RRE  RS+SSS G   F+VFS+ P     PP   
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPP 185

Query: 183 VSASEGGTDPAGITMASPSSPRTPRGDEPSQ-HIAEFQSIQADQISRSASGSNFSTNRRG 242
           + +S    D +       + P    G+   Q +     S    Q+S SAS SN       
Sbjct: 186 MPSSPSQRDESDTV---SNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSN------- 245

Query: 243 ASSSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFS 302
                R     SPS   DRAGPSE QSFSESLKSRLNA STRYKESISK+TR WK+RLFS
Sbjct: 246 ----SRPLNQSSPSEQ-DRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFS 305

Query: 303 RNSSMSELGSEVRREVNAGIASVSRMMQRLETRD----------DGVTNQDSNEPGGHVR 362
           RN+SM++LGSEV+REV+AGIA+VSRMM+RLETR+          D   N        H R
Sbjct: 306 RNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNR 365

Query: 363 RESSPENSLNDKSATASCAATS 371
             +  E+S+N++    +CA  S
Sbjct: 366 AAAGDEHSVNERGVKETCATGS 372

[Close]

BLAST of Carg16237 vs. TAIR 10
Match: AT5G22000.3 (RING-H2 group F2A )

HSP 1 Score: 379.8 bits (974), Expect = 2.5e-105
Identity = 225/382 (58.90%), Postives = 261/382 (68.32%), Query Frame = 0


Query: 3   EEKDSENRLTSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQ 62
           E   SE  LTSAAAFVEGGIQ+ACDDACSICLE FCESDPST+T+CKHE+HLQCILEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 63  RSSQCPMCWQSISLKDPTSQELLEAVERERNIRVTPVRNTAVFHHPAIGNFELQHLPLGV 122
           RSSQCPMCWQSISLKDPTSQELLEAVE+ERN R  P RN  +F HP +G+FELQHLP+GV
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 123 TNAELEERIIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGG---PPSEN 182
            NAE+EERIIQHLAAAAAMGRA H  RRE  RS+SSS G   F+VFS+ P     PP   
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPP 185

Query: 183 VSASEGGTDPAGITMASPSSPRTPRGDEPSQ-HIAEFQSIQADQISRSASGSNFSTNRRG 242
           + +S    D +       + P    G+   Q +     S    Q+S SAS SN       
Sbjct: 186 MPSSPSQRDESDTV---SNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSN------- 245

Query: 243 ASSSVRISTSDSPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFS 302
                R     SPS   DRAGPSE QSFSESLKSRLNA STRYKESISK+TR WK+RLFS
Sbjct: 246 ----SRPLNQSSPSEQ-DRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFS 305

Query: 303 RNSSMSELGSEVRREVNAGIASVSRMMQRLETRD----------DGVTNQDSNEPGGHVR 362
           RN+SM++LGSEV+REV+AGIA+VSRMM+RLETR+          D   N        H R
Sbjct: 306 RNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNR 365

Query: 363 RESSPENSLNDKSATASCAATS 371
             +  E+S+N++    +CA  S
Sbjct: 366 AAAGDEHSVNERGVKETCATGS 372

[Close]

BLAST of Carg16237 vs. TAIR 10
Match: AT4G14220.1 (RING-H2 group F1A )

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-40
Identity = 124/320 (38.75%), Postives = 176/320 (55.00%), Query Frame = 0


Query: 12  TSAAAFVEGGIQEACDDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQCPMCW 71
           +S+A  V        DDACSICLE F   DPSTVT+CKHE+HLQCI+EW QRS +CP+CW
Sbjct: 28  SSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICW 87

Query: 72  QSISLKDPTSQELLEAVERERNIRVTPVRNTA-VFHHPAIGNFELQHLPLGVTNAELEER 131
           Q   L+DP SQELL AVE+ER ++   + +++ +  H +  +F  +      ++   +E+
Sbjct: 88  QLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEEEESQFSS--FDEQ 147

Query: 132 IIQHLAAAAAMGRAHHMGRREVQRSQSSSHGRPHFLVFSTHPGG-PPSENVSASEGGTDP 191
            ++HL  AA   R   + RR+ Q S S        LV S+ P    P++ V+        
Sbjct: 148 FLRHLTEAA--HRRCLLRRRDGQISSS--------LVSSSDPTTIHPTDLVNLYR--LSA 207

Query: 192 AGITMASPSSPRTPRGDEPSQHIAEFQSIQADQISRSASGSNFSTNRRGASSSVRISTSD 251
                   S+P    G      ++   SI AD    S +GS             RIS   
Sbjct: 208 ISHVEHQNSNPCPSPGSMTPSPVSGHSSIPAD----SNNGS-------------RISPGP 267

Query: 252 SPSSNLDRAGPSEFQSFSESLKSRLNAASTRYKESISKSTRGWKERLFSRNSSMSELGSE 311
           SPS +       E  S  E++KS+L AAS +YKESISKS +G KE+L +RN+S+ EL   
Sbjct: 268 SPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKG 316

Query: 312 VRREVNAGIASVSRMMQRLE 330
           V+RE+NAGIA V+RM++R++
Sbjct: 328 VQREMNAGIAGVARMIERMD 316

[Close]

BLAST of Carg16237 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A )

HSP 1 Score: 64.3 bits (155), Expect = 2.4e-10
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 27  DDACSICLEDFCESDPSTVTACKHEFHLQCILEWCQRSSQCPMCWQSISLKD 79
           +D C IC ED+   +P   T C+HEFHL C+LEW +RS +CP+C + +   D
Sbjct: 136 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

The following BLAST results are available for this feature:

BLAST of Carg16237 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028177.1	3.0e-201	100.00	E3 ubiquitin-protein ligase RHF2A [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022934876.1	2.0e-200	99.46	E3 ubiquitin-protein ligase RHF2A-like [Cucurbita moschata]	[more]
XP_023539441.1	5.7e-200	99.20	E3 ubiquitin-protein ligase RHF2A-like [Cucurbita pepo subsp. pepo]	[more]
KAG6596638.1	6.3e-199	98.66	E3 ubiquitin-protein ligase RHF2A, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023005675.1	1.8e-198	98.66	E3 ubiquitin-protein ligase RHF2A-like [Cucurbita maxima]	[more]

BLAST of Carg16237 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT42	3.6e-104	58.90	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]
Q4TU14	4.0e-39	38.75	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q2HIJ8	3.3e-09	46.15	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q8LE94	3.7e-08	50.00	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q93ZF6	3.1e-07	45.10	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]

BLAST of Carg16237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F325	9.5e-201	99.46	E3 ubiquitin-protein ligase RHF2A-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1KY20	8.9e-199	98.66	E3 ubiquitin-protein ligase RHF2A-like OS=Cucurbita maxima OX=3661 GN=LOC1114986...	[more]
A0A0A0LB49	3.0e-178	90.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G783860 P...	[more]
A0A1S3B7P6	3.9e-178	90.08	E3 ubiquitin-protein ligase RHF2A-like OS=Cucumis melo OX=3656 GN=LOC103486708 P...	[more]
A0A5A7TKD8	3.9e-178	90.08	E3 ubiquitin-protein ligase RHF2A-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Carg16237 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22000.2	2.5e-105	59.26	RING-H2 group F2A	[more]
AT5G22000.1	2.5e-105	58.90	RING-H2 group F2A	[more]
AT5G22000.3	2.5e-105	58.90	RING-H2 group F2A	[more]
AT4G14220.1	2.9e-40	38.75	RING-H2 group F1A	[more]
AT4G00335.1	2.4e-10	46.15	RING-H2 finger B1A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 30..70 e-value: 2.0E-5 score: 34.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 29..70 e-value: 4.5E-9 score: 36.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 30..70 score: 12.135206
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 11..79 e-value: 1.4E-14 score: 55.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..285
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 1..367
None	No IPR available	PANTHER	PTHR46463:SF27	E3 UBIQUITIN-PROTEIN LIGASE RHF2A	coord: 1..367
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 23..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16237-RA	Carg16237-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity