Carg16210 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16210
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein YLS9
Location	Carg_Chr06: 2526802 .. 2527557 (-)
RNA-Seq Expression	Carg16210
Synteny	Carg16210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGACCGCCGGGTGCGTTTCGTTCCCGGTCGTTTTTCATGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGCTGTGTCTTCTTCGACGGAGTTCAAGAATTTTCAGTCGATTTTGAGTAAGATGATCGGAATCTCTTCGCACCAGTTCACGGTTTACTTAGCGGAGTATAAGATCTCTATGGATTCCACGGCAAAGATTCGGCGGAGAATCCCTATCACCGGGAAAGTCAACTTCGGCGCAATCGCACACGAGAAGAACTGTTTCTTTCTCGTGGTTCTGAAACGGTCTCGACGCGAGAGAAGGCGAAAGATCCAGGGAAACGAAGACGAATACGATTTCTCATCGGCCACAAAGACAATGACGAAGACGAATCATTCAAAGAAGAAAAATCCACTGGAGAATGTGATGCTGTTGAAACGAAACACTGGCATCGAAAACGAATTACTCCCCGGCTTCATCTCGCCAGTGACGAACCGATTCGAATACGACCAGCGATTTTGGAAGCTACAATTAGAGATGGAGAAATACTTAATCGACATAGGGCAACGCAATCTGGCGCTGGGCGGAGGCGGCGTCCAGAACGGCACTACGAGACTGAAAACGGCAGTCTGCTGGGACTGTCTGAATGCCAAAGAAACAGGCGTGGCGGCCGGATTTCACTGCTGCGCTCACGACGCCGTGACGATGGGATTCCGGTCACACGCCGGTCCAATTGCCCGACCCGTGAAAGAATCCGACCCGAAATAG

mRNA sequence

ATGGTGGAGACCGCCGGGTGCGTTTCGTTCCCGGTCGTTTTTCATGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGCTGTGTCTTCTTCGACGGAGTTCAAGAATTTTCAGTCGATTTTGAGTAAGATGATCGGAATCTCTTCGCACCAGTTCACGGTTTACTTAGCGGAGTATAAGATCTCTATGGATTCCACGGCAAAGATTCGGCGGAGAATCCCTATCACCGGGAAAGTCAACTTCGGCGCAATCGCACACGAGAAGAACTGTTTCTTTCTCGTGGTTCTGAAACGGTCTCGACGCGAGAGAAGGCGAAAGATCCAGGGAAACGAAGACGAATACGATTTCTCATCGGCCACAAAGACAATGACGAAGACGAATCATTCAAAGAAGAAAAATCCACTGGAGAATGTGATGCTGTTGAAACGAAACACTGGCATCGAAAACGAATTACTCCCCGGCTTCATCTCGCCAGTGACGAACCGATTCGAATACGACCAGCGATTTTGGAAGCTACAATTAGAGATGGAGAAATACTTAATCGACATAGGGCAACGCAATCTGGCGCTGGGCGGAGGCGGCGTCCAGAACGGCACTACGAGACTGAAAACGGCAGTCTGCTGGGACTGTCTGAATGCCAAAGAAACAGGCGTGGCGGCCGGATTTCACTGCTGCGCTCACGACGCCGTGACGATGGGATTCCGGTCACACGCCGGTCCAATTGCCCGACCCGTGAAAGAATCCGACCCGAAATAG

Coding sequence (CDS)

ATGGTGGAGACCGCCGGGTGCGTTTCGTTCCCGGTCGTTTTTCATGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGCTGTGTCTTCTTCGACGGAGTTCAAGAATTTTCAGTCGATTTTGAGTAAGATGATCGGAATCTCTTCGCACCAGTTCACGGTTTACTTAGCGGAGTATAAGATCTCTATGGATTCCACGGCAAAGATTCGGCGGAGAATCCCTATCACCGGGAAAGTCAACTTCGGCGCAATCGCACACGAGAAGAACTGTTTCTTTCTCGTGGTTCTGAAACGGTCTCGACGCGAGAGAAGGCGAAAGATCCAGGGAAACGAAGACGAATACGATTTCTCATCGGCCACAAAGACAATGACGAAGACGAATCATTCAAAGAAGAAAAATCCACTGGAGAATGTGATGCTGTTGAAACGAAACACTGGCATCGAAAACGAATTACTCCCCGGCTTCATCTCGCCAGTGACGAACCGATTCGAATACGACCAGCGATTTTGGAAGCTACAATTAGAGATGGAGAAATACTTAATCGACATAGGGCAACGCAATCTGGCGCTGGGCGGAGGCGGCGTCCAGAACGGCACTACGAGACTGAAAACGGCAGTCTGCTGGGACTGTCTGAATGCCAAAGAAACAGGCGTGGCGGCCGGATTTCACTGCTGCGCTCACGACGCCGTGACGATGGGATTCCGGTCACACGCCGGTCCAATTGCCCGACCCGTGAAAGAATCCGACCCGAAATAG

Protein sequence

MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDPK

Homology

[Close]

BLAST of Carg16210 vs. NCBI nr
Match: KAG7028150.1 (hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.3 bits (1305), Expect = 7.6e-140
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDFSSAT 120
           ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDFSSAT
Sbjct: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDFSSAT 120

Query: 121 KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYL 180
           KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYL
Sbjct: 121 KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYL 180

Query: 181 IDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGP 240
           IDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGP
Sbjct: 181 IDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGP 240

Query: 241 IARPVKESDPK 252
           IARPVKESDPK
Sbjct: 241 IARPVKESDPK 251

[Close]

BLAST of Carg16210 vs. NCBI nr
Match: KAG6596614.1 (hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 499.2 bits (1284), Expect = 2.1e-137
Identity = 247/251 (98.41%), Postives = 248/251 (98.80%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDFSSAT 120
           ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYD SSAT
Sbjct: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDISSAT 120

Query: 121 KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYL 180
           KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISP TNRFEYDQRFWKLQLEMEKYL
Sbjct: 121 KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYL 180

Query: 181 IDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGP 240
           I+IGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVT GFRSHAGP
Sbjct: 181 INIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGP 240

Query: 241 IARPVKESDPK 252
           IARPVKESDPK
Sbjct: 241 IARPVKESDPK 251

[Close]

BLAST of Carg16210 vs. NCBI nr
Match: XP_031739121.1 (uncharacterized protein LOC116402855 [Cucumis sativus] >KGN59202.1 hypothetical protein Csa_000824 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 6.7e-96
Identity = 189/252 (75.00%), Postives = 210/252 (83.33%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRK-IQGNEDEYDFSSA 120
           IS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSRRERRRK I  NE++Y FSSA
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 TKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKY 180
           TKT TKTN  KKKNP ENVMLL+RN GIENELL GFISPV +R+EY+ R  KLQLE EKY
Sbjct: 121 TKTQTKTNLLKKKNPPENVMLLRRNGGIENELLAGFISPVMDRYEYEDRIRKLQLEKEKY 180

Query: 181 LIDIGQRNLAL--GGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSH 240
           L+ I   NL +  GG G +N + R +  +C DCL+AKE GVAAGFHCCA+DAVT GFRSH
Sbjct: 181 LMSIQMSNLRMGDGGDGGRNKSGRSERRICGDCLSAKERGVAAGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESD 250
           AGPIARPVKES+
Sbjct: 241 AGPIARPVKESE 252

[Close]

BLAST of Carg16210 vs. NCBI nr
Match: KAG7017495.1 (hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.5 bits (916), Expect = 9.7e-95
Identity = 182/253 (71.94%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVETAG VSFP+VFHDGE+D  +GSV VSSST+FKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGGVSFPIVFHDGEQDVPIGSVIVSSSTDFKNFQSDLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKI-QGNEDEYDFSSA 120
           IS+D + KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSRRERRRK+   NEDEY   SA
Sbjct: 61  ISLDFSTKIRRRIPITGKVNFGAISCEKNSFFLVVLKRSRRERRRKVTDNNEDEYYLPSA 120

Query: 121 TKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKY 180
           TKT  KTN   KKNP ENVMLL+RN GIEN++L GFISP  +R++Y++R  KLQLE E Y
Sbjct: 121 TKTKAKTNQPNKKNPPENVMLLRRNAGIENKMLSGFISPAMDRYDYEERIRKLQLERENY 180

Query: 181 LIDIGQRNLALG--GGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSH 240
              +G RNL  G  G G  NG+ + KT  C DCL+AKETG A GFHCCA+DAVT GFRSH
Sbjct: 181 STSVGVRNLTAGGDGDGSWNGSVKSKTTACRDCLSAKETGAAVGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESDP 251
           AGPIARP+KES+P
Sbjct: 241 AGPIARPIKESEP 253

[Close]

BLAST of Carg16210 vs. NCBI nr
Match: KAG6580743.1 (hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-94
Identity = 182/253 (71.94%), Postives = 205/253 (81.03%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVETAG VSFP+VFHDGE+D  +GSV VSSST+FKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGGVSFPIVFHDGEQDVPIGSVIVSSSTDFKNFQSDLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKI-QGNEDEYDFSSA 120
           IS+D + KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSRRERRRK+   NEDEY   SA
Sbjct: 61  ISLDFSTKIRRRIPITGKVNFGAISCEKNSFFLVVLKRSRRERRRKVTDNNEDEYYLPSA 120

Query: 121 TKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKY 180
           TKT  KTN   KKNP ENVMLL+RN GIEN++L GFISP  +R++Y++R  KLQLE E Y
Sbjct: 121 TKTKAKTNQPNKKNPPENVMLLRRNAGIENKMLSGFISPAMDRYDYEERIRKLQLERENY 180

Query: 181 LIDIGQRNLALG--GGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSH 240
              +G RNL  G  G G  NG+ + KT  C DCL+AKETG A GFHCCA+DAVT GFRSH
Sbjct: 181 STSVGLRNLTAGGDGDGGWNGSVKSKTTACRDCLSAKETGAAVGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESDP 251
           AGPIARP+KES+P
Sbjct: 241 AGPIARPIKESEP 253

[Close]

BLAST of Carg16210 vs. ExPASy TrEMBL
Match: A0A0A0LER6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780540 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.3e-96
Identity = 189/252 (75.00%), Postives = 210/252 (83.33%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRK-IQGNEDEYDFSSA 120
           IS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSRRERRRK I  NE++Y FSSA
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 TKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKY 180
           TKT TKTN  KKKNP ENVMLL+RN GIENELL GFISPV +R+EY+ R  KLQLE EKY
Sbjct: 121 TKTQTKTNLLKKKNPPENVMLLRRNGGIENELLAGFISPVMDRYEYEDRIRKLQLEKEKY 180

Query: 181 LIDIGQRNLAL--GGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSH 240
           L+ I   NL +  GG G +N + R +  +C DCL+AKE GVAAGFHCCA+DAVT GFRSH
Sbjct: 181 LMSIQMSNLRMGDGGDGGRNKSGRSERRICGDCLSAKERGVAAGFHCCANDAVTAGFRSH 240

Query: 241 AGPIARPVKESD 250
           AGPIARPVKES+
Sbjct: 241 AGPIARPVKESE 252

[Close]

BLAST of Carg16210 vs. ExPASy TrEMBL
Match: A0A5A7TLT1 (Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.8e-94
Identity = 183/250 (73.20%), Postives = 209/250 (83.60%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           M +T   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MADTVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRK-IQGNEDEYDFSSA 120
           IS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSRRERRRK I  NE++Y FSSA
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 TKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKY 180
           TKT TKTN  KKKNP ENVMLL+RN GIENELL GF+SPV +R+EY++R  KLQLE EKY
Sbjct: 121 TKTQTKTNQPKKKNPPENVMLLRRNGGIENELLSGFVSPVMDRYEYEERIRKLQLEREKY 180

Query: 181 LIDIGQRNLAL--GGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSH 240
           LI +   NL +  GG G +N + R +T +C DC++AKE GVAAGFHCCA+DAVT GFRS 
Sbjct: 181 LISLQINNLTMRGGGDGGRNNSGRSETRICRDCVSAKERGVAAGFHCCANDAVTAGFRSL 240

Query: 241 AGPIARPVKE 248
           AGPIARPV++
Sbjct: 241 AGPIARPVEK 250

[Close]

BLAST of Carg16210 vs. ExPASy TrEMBL
Match: A0A6A1UKZ8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004710 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 9.3e-59
Identity = 134/256 (52.34%), Postives = 175/256 (68.36%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVE A  VSFPVVF DGER++++G+V VS S +FK+FQSI+S+ IGIS HQF+VYLA   
Sbjct: 1   MVEIASGVSFPVVFFDGERESNIGNVLVSPSLQFKSFQSIMSRKIGISPHQFSVYLA--- 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQ--GNEDEYDFSS 120
             +   ++  R+IPITGK NFG I  +K+CFFLVVLKRSRRER+R+ Q    ED+Y ++S
Sbjct: 61  --VKHRSETLRKIPITGKFNFGTIFRDKDCFFLVVLKRSRRERKRRNQRASQEDKY-YAS 120

Query: 121 ATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEK 180
           +   + + N    K P ENVMLL+RN  I ++  PGF SP+ +R  Y++R  +LQ+E E+
Sbjct: 121 SMNVVQRLN----KIP-ENVMLLRRNDAIGSQGFPGFASPIVDRAGYEKRVRELQMERER 180

Query: 181 YLIDIGQRNLALG----GGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGF 240
           YL ++G R L LG    GG  +N  TR     C +C+ AK  G   GFH C +DAVT GF
Sbjct: 181 YLTNMGLRGLCLGKEDNGGVDENVVTRNGVVECEECMRAKAIGTEVGFHWCVYDAVTSGF 240

Query: 241 RSHAGPIARPVKESDP 251
           RS AGPIARPVK S+P
Sbjct: 241 RSPAGPIARPVKGSNP 245

[Close]

BLAST of Carg16210 vs. ExPASy TrEMBL
Match: A0A6P9E6Z6 (uncharacterized protein LOC118347905 OS=Juglans regia OX=51240 GN=LOC118347905 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.1e-55
Identity = 130/256 (50.78%), Postives = 169/256 (66.02%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           MV  A  VSFPVVF DGER+  +G V V  S  FKNFQSILS+ IGIS HQF+VYLA   
Sbjct: 8   MVGIADGVSFPVVFFDGERETSIGDVVVHPSLGFKNFQSILSRKIGISPHQFSVYLA--- 67

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKI--QGNEDEYDFSS 120
             +   ++  R+IPITGKVNF AI+ EK+CFFLV+LKRSRRER+R+   +  E+EY  SS
Sbjct: 68  --VKYRSETLRKIPITGKVNFAAISREKDCFFLVILKRSRRERKRRTRKEFQEEEYYASS 127

Query: 121 ATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEK 180
               M+      KK P+ NVMLL+R+ G E +  PG++SP+ +R  Y++R  +LQ+E E+
Sbjct: 128 ----MSVVQRRNKKVPV-NVMLLRRDAGTEGQAFPGYVSPIVDRDGYEKRVKELQMERER 187

Query: 181 YLIDIGQRNLAL----GGGGVQNGTTR--LKTAVCWDCLNAKETGVAAGFHCCAHDAVTM 240
           YLI++G   L+L     GG  + G  R  +    C +C+ AK+ G   GFH C +D VT+
Sbjct: 188 YLINMGLSGLSLEKEDNGGVGERGVARNGVVDVECEECMRAKQIGDEVGFHGCVYDTVTV 247

Query: 241 GFRSHAGPIARPVKES 249
           GFRS AGPIARPVK S
Sbjct: 248 GFRSPAGPIARPVKGS 253

[Close]

BLAST of Carg16210 vs. ExPASy TrEMBL
Match: W9S997 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003317 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 123/251 (49.00%), Postives = 156/251 (62.15%), Query Frame = 0


Query: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVE  G VSFPVVF DGE + ++GSVAV ++ EFK FQ++LS+ IGIS HQF+V+L    
Sbjct: 1   MVEIPGGVSFPVVFFDGEHETEIGSVAVYAAMEFKRFQALLSQKIGISPHQFSVHL---- 60

Query: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDFSSAT 120
               S+ + RR+IPITGKVNFGAI  EK CFF+VVLKRSRR RRRK   +  + D+    
Sbjct: 61  ----SSPESRRKIPITGKVNFGAICREKGCFFVVVLKRSRRPRRRKSHHHHHQ-DYLDDV 120

Query: 121 KTMTKTNHSK--KKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEK 180
                 +HS    KNP  NVMLL+R+  ++       +S  ++R EY+ R   LQLE E 
Sbjct: 121 ILYLDADHSLMISKNPPPNVMLLRRDAAVD-----CCVSSSSDRVEYENRVLNLQLEKET 180

Query: 181 YLIDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHA 240
           YL+     N+ L G G +   T     VC DC+ AKE G  AGFH C +DAVT GFR  A
Sbjct: 181 YLM-----NMGLSGLGREANET--AAPVCGDCVKAKELGQEAGFHWCVYDAVTFGFRPPA 230

Query: 241 GPIARPVKESD 250
           GPIARP +  +
Sbjct: 241 GPIARPFRRPE 230

The following BLAST results are available for this feature:

BLAST of Carg16210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028150.1	7.6e-140	100.00	hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6596614.1	2.1e-137	98.41	hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_031739121.1	6.7e-96	75.00	uncharacterized protein LOC116402855 [Cucumis sativus] >KGN59202.1 hypothetical ...	[more]
KAG7017495.1	9.7e-95	71.94	hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580743.1	1.3e-94	71.94	hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg16210 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg16210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LER6	3.3e-96	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780540 PE=4 SV=1	[more]
A0A5A7TLT1	6.8e-94	73.20	Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 ...	[more]
A0A6A1UKZ8	9.3e-59	52.34	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004710 PE=4 SV=1	[more]
A0A6P9E6Z6	2.1e-55	50.78	uncharacterized protein LOC118347905 OS=Juglans regia OX=51240 GN=LOC118347905 P...	[more]
W9S997	1.8e-49	49.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003317 PE=4 SV=1	[more]

BLAST of Carg16210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36351	EMBRYO SAC DEVELOPMENT ARREST 12	coord: 1..248
None	No IPR available	PANTHER	PTHR36351:SF1	EMBRYO SAC DEVELOPMENT ARREST 12	coord: 1..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16210-RA	Carg16210-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane